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Pregenerated sensors for PGLYRP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030413

Ensembl transcript IDs: ENSMUST00000032573.8

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGAGAAACTGCAGGAGGTTaGCAGACCCAGGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGETAGG*QTQEGK
Trigger: CTTGCCCTCCTGGGTCTGGCAACCTCCTGCAGTTTC...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR CCA 90 bp GTTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGCAGATGGGCCCTGTGTaGTCACCCTTGATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGAESLLGVNGKKQVAGGQMGPV*SPLMFQ
Trigger: CTGGAACATCAAGGGTGACCACACAGGGCCCATCTG...CCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR GCA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGAGGCTGTTGCAGAAGCTaGCGGCTGTGTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGGCCRS*RLCVRS
Trigger: TGATCTCACACACAGCCGGCAGCTTCTGCAACAGCC...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR GCA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGAGGTAATGCTGCACATTaGGGGCCTGCTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGGNAAH*GPAVHR
Trigger: CCTGTGAACAGCAGGCCCGCAATGTGCAGCATTACC...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR GCA 90 bp GTTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGGGAGAGAGAGTGCTTTaGACATCCCGGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VGAESLLGVNGKKQVAGGGERVL*TSRCPL
Trigger: CAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCC...CCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR GCA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGACACCTGGAGAGAGAGTaGTTTGCACATCCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGHLERE*FAHPGV
Trigger: GACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTG...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR CCA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGAACATGGGATTCCAGATaGGCCCTGTGTGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGTWDSR*ALCGHP
Trigger: AGGGTGACCACACAGGGCCCATCTGGAATCCCATGT...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR TCA 90 bp GTTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGCATCCCGGTGTCCTTTaGCTTCATAGTTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: VGAESLLGVNGKKQVAGGHPGVL*LHSWIS
Trigger: TGAGATCCAACTATGAAGTCAAAGGACACCGGGATG...CCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS GCA 90 bp CATTGCGGGCCTGCTGTTCACAGGAGTCCGGGCTGTTGCAGAAGCTaGCGGCTGTGTGTGAGATCACCACGTAGCGAACTGGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: HCGPAVHRSPGCCRS*RLCVRSPRSELGAP
Trigger: TGGGGCACCCAGTTCGCTACGTGGTGATCTCACACACAGCCGGCAGCTTCTGCAACAGCCCGGACTCCTGTGAACAGCAGGCCCGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS GCA 90 bp AATGCTGCACATTGCGGGCCTGCTGTTCACAGGAGTCCGGGCTGTTaGAGAAGCTGCCGGCTGTGTGTGAGATCACCACGTAGCGAACTG +
Preference number: 5 (lower is better)
Translates to: NAAHCGPAVHRSPGC*RSCRLCVRSPRSEL
Trigger: CAGTTCGCTACGTGGTGATCTCACACACAGCCGGCAGCTTCTGCAACAGCCCGGACTCCTGTGAACAGCAGGCCCGCAATGTGCAGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR CAA 90 bp GTTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGCCTGTGTGGTCACCCTaGATGTTCCAGCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: VGAESLLGVNGKKQVAGGPVWSP*MFQPRP
Trigger: AGGCCGAGGCTGGAACATCAAGGGTGACCACACAGG...CCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR CAA 90 bp GTTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGTGGAGAGAGAGTGCTTaGCACATCCCGGTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: VGAESLLGVNGKKQVAGGWRESA*HIPVSF
Trigger: AAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCA...CCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS TCA 90 bp GTTGGTCACCTGGAGAGAGAGTGCTTTGCACATCCCGGTGTCCTTTaGCTTCATAGTTGGATCTCAGGAAGCCCCGAGACACCCCACATT +
Preference number: 5 (lower is better)
Translates to: VGHLERECFAHPGVL*LHSWISGSPETPHI
Trigger: AATGTGGGGTGTCTCGGGGCTTCCTGAGATCCAACTATGAAGTCAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS-3UTR CAA 90 bp TTGGTGCTGAGTCTTTATTGGGGGTCAATGGGAAGAAGCAGGTGGCAGGAGGGAGATGACCTGATAGAGTaGGTCACCTGGAGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: LVLSLYWGSMGRSRWQEGDDLIE*VTWRES
Trigger: ACTCTCTCTCCAGGTGACCAACTCTATCAGGTCATC...TCCCTCCTGCCACCTGCTTCTTCCCATTGACCCCCAATAAAGACTCAGCACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS CCA 90 bp TCGGTAGTGTTCCCAGCTTTGGATGACCTGATAGAGTTGGTCACCTaGAGAGAGAGTGCTTTGCACATCCCGGTGTCCTTTGACTTCATA +
Preference number: 5 (lower is better)
Translates to: SVVFPALDDLIELVT*RESALHIPVSFDFI
Trigger: TATGAAGTCAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTCATCCAAAGCTGGGAACACTACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS GCA 72 bp CCACTCACTGCGGGGCACGATGAAACTGCAGGAGGTTaGCAGACCCAGGAGGGCAAGGAGAGCACAGGCAAA +
Preference number: 6 (lower is better)
Translates to: PLTAGHDETAGG*QTQEGKESTGK
Trigger: TTTGCCTGTGCTCTCCTTGCCCTCCTGGGTCTGGCAACCTCCTGCAGTTTCATCGTGCCCCGCAGTGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS GCA 72 bp CCTGCTGTTCACAGGAGTCCGGGCTGTTGCAGAAGCTaGCGGCTGTGTGTGAGATCACCACGTAGCGAACTG +
Preference number: 6 (lower is better)
Translates to: PAVHRSPGCCRS*RLCVRSPRSEL
Trigger: CAGTTCGCTACGTGGTGATCTCACACACAGCCGGCAGCTTCTGCAACAGCCCGGACTCCTGTGAACAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS TCA 72 bp CTGGAGAGAGAGTGCTTTGCACATCCCGGTGTCCTTTaGCTTCATAGTTGGATCTCAGGAAGCCCCGAGACA +
Preference number: 6 (lower is better)
Translates to: LERECFAHPGVL*LHSWISGSPET
Trigger: TGTCTCGGGGCTTCCTGAGATCCAACTATGAAGTCAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS CAA 72 bp TCGGTAGTGTTCCCAGCTTTGGATGACCTGATAGAGTaGGTCACCTGGAGAGAGAGTGCTTTGCACATCCCG +
Preference number: 6 (lower is better)
Translates to: SVVFPALDDLIE*VTWRESALHIP
Trigger: CGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTCATCCAAAGCTGGGAACACTACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS CCA 72 bp TTCCCAGCTTTGGATGACCTGATAGAGTTGGTCACCTaGAGAGAGAGTGCTTTGCACATCCCGGTGTCCTTT +
Preference number: 6 (lower is better)
Translates to: FPALDDLIELVT*RESALHIPVSF
Trigger: AAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTCATCCAAAGCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS CAA 72 bp GACCTGATAGAGTTGGTCACCTGGAGAGAGAGTGCTTaGCACATCCCGGTGTCCTTTGACTTCATAGTTGGA +
Preference number: 6 (lower is better)
Translates to: DLIELVTWRESA*HIPVSFDFIVG
Trigger: TCCAACTATGAAGTCAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8
CDS CAA 90 bp GCTTTGGATGACCTGATAGAGTTGGTCACCTGGAGAGAGAGTGCTTaGCACATCCCGGTGTCCTTTGACTTCATAGTTGGATCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: ALDDLIELVTWRESA*HIPVSFDFIVGSQE
Trigger: TTCCTGAGATCCAACTATGAAGTCAAAGGACACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTCATCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032573.8