Pregenerated sensors for PGLS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031807Ensembl transcript IDs: ENSMUST00000034264.11, ENSMUST00000127626.8, ENSMUST00000138742.8, ENSMUST00000143441.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCAAGGGCCCTTGGTGCTCCCTGACTCGAGGCAGCTTTTTGGTGTaGGACAGCTGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VKGPWCSLTRGSFLV*DSWHPAGSWGPSSW Trigger: CCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCACCAAGGGCCCTTGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 90 bp | GTGGTGGGTGGCCCTGAAGCAGGGTCAAGGGCCCTTGGTGCTCCCTaGCTCGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VVGGPEAGSRALGAP*LEAAFWCGTAGIRL Trigger: CAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCACCAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 90 bp | CCACGCAGAACACAGAAGGTTGGTTGCCACTGTGGTGGGTGGCCCTaGAGCAGGGTCAAGGGCCCTTGGTGCTCCCTGACTCGAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PRRTQKVGCHCGGWP*SRVKGPWCSLTRGS Trigger: GCTGCCTCGAGTCAGGGAGCACCAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCAACCTTCTGTGTTCTGCGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 90 bp | CGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTaGGGTCCCAGCTCCTGGGAAATGTGTCTGAGCACAGCTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RGSFLVWDSWHPAGS*GPSSWEMCLSTAAA Trigger: GGCTGCAGCTGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 90 bp | CCTGACTCGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTaGGTCCTGGGGTCCCAGCTCCTGGGAAATGTGTCTGAGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: PDSRQLFGVGQLASG*VLGSQLLGNVSEHS Trigger: GCTGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 90 bp | ACGTCCGTCTCCACGCAGAACACAGAAGGTTGGTTGCCACTGTGGTaGGTGGCCCTGAAGCAGGGTCAAGGGCCCTTGGTGCTCCCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: TSVSTQNTEGWLPLW*VALKQGQGPLVLPD Trigger: GTCAGGGAGCACCAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCAACCTTCTGTGTTCTGCGTGGAGACGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 90 bp | GGTCAATGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTaGGGCAGAGGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACG | + |
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Preference number: 1 (lower is better) Translates to: GQCHTPRGGWQHQRS*GRGHPKGRGIHAGT Trigger: CGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 90 bp | TGGGGCAGAGGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACGTaGGCAGTGTATATCCTGTCAGAGCTGCAAAGCCCAGCGGACAAC | + |
|
Preference number: 1 (lower is better) Translates to: WGRGHPKGRGIHAGT*AVYILSELQSPADN Trigger: GTTGTCCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACCTCTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR GCA 90 bp | GAGGTATTCACGCTGGGACGTGAGCAGTGTATATCCTGTCAGAGCTaGAAAGCCCAGCGGACAACCCCCAGACTCATAGTTCTCCTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: EVFTLGREQCISCQS*KAQRTTPRLIVLLV Trigger: CACAAGGAGAACTATGAGTCTGGGGGTTGTCCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGTGAATACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 90 bp | CAAAGCCCAGCGGACAACCCCCAGACTCATAGTTCTCCTTGTGACTaGACCATTCTAGACGTCCGTCTCCACGCAGAACACAGAAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: QSPADNPQTHSSPCD*TILDVRLHAEHRRL Trigger: CAACCTTCTGTGTTCTGCGTGGAGACGGACGTCTAGAATGGTTCAGTCACAAGGAGAACTATGAGTCTGGGGGTTGTCCGCTGGGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 90 bp | GTTTGCTGTTTGGGTTTTGTCCCGTTGACCTCCTCCCATGAACAGTaGGGTGCTTCATTTCTTTCCCAAAGCAAGAGTACTCACTCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: VCCLGFVPLTSSHEQ*GASFLSQSKSTHSR Trigger: CCTTGAGTGAGTACTCTTGCTTTGGGAAAGAAATGAAGCACCCCACTGTTCATGGGAGGAGGTCAACGGGACAAAACCCAAACAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGAGGTCATCAGCTGGCATCCGGCTaGGTCCTGGGGTCCCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: CHTPRGGWQHQRSWGRGHQLASG*VLGSQL Trigger: GAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTG...ATGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CAA 90 bp | TGGTTGCCACTGTGGTGGGTGGCCCTGAAGCAGGGTCAAGGGCCCTaGGTGCTCCCTGACTCGAGGCAGCTTTTTGGTGTGGGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: WLPLWWVALKQGQGP*VLPDSRQLFGVGQL Trigger: CAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCACCAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCAATGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGACCTGGGAAATGTGTCTaGGCACAGCTGCAGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GQCHTPRGGWQHQRSWGRPGKCV*AQLQPA Trigger: AGCTGGCTGCAGCTGTGCTCAGACACATTTCCCAGG...TCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGAGGTCATGGCAGCTTTTTGGTGTaGGACAGCTGGCATCCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: CHTPRGGWQHQRSWGRGHGSFLV*DSWHPA Trigger: AGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCC...ATGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGCTGGGGCAGAGGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACGTGTGTCTGAGCACAGCTaGAGCCAGCTGCCTACGGTA | + |
|
Preference number: 2 (lower is better) Translates to: RGAGAEVIQKAEVFTLGRVSEHS*SQLPTV Trigger: TACCGTAGGCAGCTGGCTGCAGCTGTGCTCAGACAC...ACGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACCTCTGCCCCAGCTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGAGGTCATCAGAGGTATTCACGCTaGGACGTGAGCAGTGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: CHTPRGGWQHQRSWGRGHQRYSR*DVSSVY Trigger: ATATACACTGCTCACGTCCCAGCGTGAATACCTCTG...ATGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTATATCCTGTCAGAGCTGCAAAGCCCAGCGGACAACCCCCAGACTCATATGGGGTCCCAGCTCCTaGGAAATGTGTCTGAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: QCISCQSCKAQRTTPRLIWGPSS*EMCLST Trigger: TGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCA...TATGAGTCTGGGGGTTGTCCGCTGGGCTTTGCAGCTCTGACAGGATATACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACGTGAGCAGTGTATATTGGTTGCCACTGTGGTaGGTGGCCCTGAAGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QRSSKRQRYSRWDVSSVYWLPLW*VALKQG Trigger: ACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCA...ATATACACTGCTCACGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | AGCTGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTaGGAAATGTGTCTGAGCACAGCTGCAGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SWHPAGSWGPSS*EMCLSTAAASC Trigger: GCAGCTGGCTGCAGCTGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | TCCCTGACTCGAGGCAGCTTTTTGGTGTGGGACAGCTaGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTRGSFLVWDS*HPAGSWGPSSW Trigger: CCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | CCTTGGTGCTCCCTGACTCGAGGCAGCTTTTTGGTGTaGGACAGCTGGCATCCGGCTGGGTCCTGGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PWCSLTRGSFLV*DSWHPAGSWGP Trigger: GGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCACCAAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | AGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTaGGTCCTGGGGTCCCAGCTCCTGGGAAATGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: RQLFGVGQLASG*VLGSQLLGNVS Trigger: AGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | TCCACGCAGAACACAGAAGGTTGGTTGCCACTGTGGTaGGTGGCCCTGAAGCAGGGTCAAGGGCCCTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: STQNTEGWLPLW*VALKQGQGPLV Trigger: CACCAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCAACCTTCTGTGTTCTGCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | GTCTCCACGCAGAACACAGAAGGTTGGTTGCCACTGTaGTGGGTGGCCCTGAAGCAGGGTCAAGGGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VSTQNTEGWLPL*WVALKQGQGPL Trigger: CAAGGGCCCTTGACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCAACCTTCTGTGTTCTGCGTGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | TTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTaGGGTCCCAGCTCCTGGGAAATGTGTCTGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: FLVWDSWHPAGS*GPSSWEMCLST Trigger: TGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR GCA 72 bp | CTGGCCAGCCATAGAACTCGGGGCACCGCCTCCCCGTaGACCACCAGCAGTATCTTTGCTTTGTTCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LASHRTRGTASP*TTSSIFALFLR Trigger: TCTAAGGAACAAAGCAAAGATACTGCTGGTGGTGCACGGGGAGGCGGTGCCCCGAGTTCTATGGCTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | TCACTCAAGGGTCAATGCCACACACCAAGGGGTGGGTaGCAACATCAGAGGAGCTGGGGCAGAGGTCATCCA | + |
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Preference number: 3 (lower is better) Translates to: SLKGQCHTPRGG*QHQRSWGRGHP Trigger: TGGATGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGACCCTTGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR CCA 72 bp | GTACTCACTCAAGGGTCAATGCCACACACCAAGGGGTaGGTGGCAACATCAGAGGAGCTGGGGCAGAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VLTQGSMPHTKG*VATSEELGQRS Trigger: TGACCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGACCCTTGAGTGAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR GCA 72 bp | ACGCTGGGACGTGAGCAGTGTATATCCTGTCAGAGCTaGAAAGCCCAGCGGACAACCCCCAGACTCATAGTT | + |
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Preference number: 3 (lower is better) Translates to: TLGREQCISCQS*KAQRTTPRLIV Trigger: AACTATGAGTCTGGGGGTTGTCCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 72 bp | GCGGACAACCCCCAGACTCATAGTTCTCCTTGTGACTaGACCATTCTAGACGTCCGTCTCCACGCAGAACAC | + |
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Preference number: 3 (lower is better) Translates to: ADNPQTHSSPCD*TILDVRLHAEH Trigger: GTGTTCTGCGTGGAGACGGACGTCTAGAATGGTTCAGTCACAAGGAGAACTATGAGTCTGGGGGTTGTCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 72 bp | GGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACGTaGGCAGTGTATATCCTGTCAGAGCTGCAAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: GHPKGRGIHAGT*AVYILSELQSP Trigger: TGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR TCA 72 bp | TTCCTTAGATGGTTTGCTGTTTGGGTTTTGTCCCGTTaGCCTCCTCCCATGAACAGTGGGGTGCTTCATTTC | + |
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Preference number: 3 (lower is better) Translates to: FLRWFAVWVLSR*PPPMNSGVLHF Trigger: GAAATGAAGCACCCCACTGTTCATGGGAGGAGGTCAACGGGACAAAACCCAAACAGCAAACCATCTAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| 3UTR GCA 72 bp | TGTTTTCCCAGTATGTGTGTATACACAGCAAGAACATaGCTGGTAGCTGCAAAGGTTAGAAGAGGGCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: CFPSMCVYTART*LVAAKVRRGLQ Trigger: CTGAAGCCCTCTTCTAACCTTTGCAGCTACCAGGCATGTTCTTGCTGTGTATACACACATACTGGGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCAGCAGAGGGCGCCCGTaGGCGGCTGCACCAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPSRGRP*AAAPRR Trigger: CCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCT...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCAGCAGAGGGCGCCCGTaGGCGGCTGCACCAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTSRGRP*AAAPRR Trigger: CCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCT...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCGACGCGCCCAGCTCTTaGGGGCTGGAGAAGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPDAPSS*GLEKTE Trigger: CTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTC...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034264.11 |
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| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCGCGCTTCAGCACAGCTaGCTTGCCTTCCCCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPALQHS*LAFPRG Trigger: GCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGC...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGCGCTTCAGCACAGCTaGCTTGCCTTCCCCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTALQHS*LAFPRG Trigger: GCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCAGCAGCCGGGCAGCTaGCTCGTCCAGGAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTQQPGS*LVQEPA Trigger: TGCTGGTTCCTGGACGAGGCAGCTGCCCGGCTGCTG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCAGCAGCCGGGCAGCTaGCTCGTCCAGGAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPQQPGS*LVQEPA Trigger: TGCTGGTTCCTGGACGAGGCAGCTGCCCGGCTGCTG...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCGGTCTCGGGCTAGCATaGAGACCAGGCTGCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPGLGLA*RPGCRL Trigger: CAGGCGGCAGCCTGGTCTCCATGCTAGCCCGAGACC...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034264.11 |
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| CDS-3UTR CCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCTACGTGCTCTCGGCGTaGTCGAAGGGCACGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTYVLSA*SKGTRR Trigger: GCGCCTCGTGCCCTTCGACCACGCCGAGAGCACGTA...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034264.11 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGGTAGAGGCCGTACGTaGTCTCGGCGTGGTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTGRGRT*SRRGRR Trigger: CCTTCGACCACGCCGAGAGCACGTACGGCCTCTACC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034264.11 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCTGGGATGGGCAGCTTTaGGAGCAGGTGTGTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTWDGQL*EQVCGG Trigger: TCCCCCACACACCTGCTCTCAAAGCTGCCCATCCCA...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGTTAGGGTCACCCTCTaGGGTGGTGGCTTTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTVRVTL*GGGFGE Trigger: CTCCCCAAAGCCACCACCGCAGAGGGTGACCCTAAC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCTCAGCACAGCTGCCTTaGCTTCCCCCGTGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTSAQLP*LPPWPQ Trigger: TTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGA...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCTCAGCACAGCTGCCTTaGCTTCCCCCGTGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPSAQLP*LPPWPQ Trigger: TTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGA...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCAAGAGCGAACAGGTATaGCCGTCAGGGCCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPKSEQV*PSGPTP Trigger: GGGAGTGGGCCCTGACGGCCATACCTGTTCGCTCTT...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCGGTCACCCTCTGCGGTaGTGGCTTTGGGGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPGHPLR*WLWGVT Trigger: AGTGACTCCCCAAAGCCACCACCGCAGAGGGTGACC...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGGTCACCCTCTGCGGTaGTGGCTTTGGGGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTGHPLR*WLWGVT Trigger: AGTGACTCCCCAAAGCCACCACCGCAGAGGGTGACC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCTGACTCGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGGACGCGCCCAGCTCTTaGGGGCTGGAGAAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLTRGSFLVWDSWHPAGDAPSS*GLEKTE Trigger: CTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTC...CCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR GCA 90 bp | TCGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTGGGGTCCGGTAGAGGCCGTACGTaGTCTCGGCGTGGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRQLFGVGQLASGWVLGSGRGRT*SRRGRR Trigger: CCTTCGACCACGCCGAGAGCACGTACGGCCTCTACC...GGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCCTTGTCCTCCAGGATaGGCTTCAGCACAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPPCPPG*ASAQLP Trigger: AGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGG...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCTTGTCCTCCAGGATaGGCTTCAGCACAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTPCPPG*ASAQLP Trigger: AGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGGGAAATGTGTCTGAGCACAGGTCTCGGGCTAGCATaGAGACCAGGCTGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHPAGSWGPSSWEMCLSTGLGLA*RPGCRL Trigger: CAGGCGGCAGCCTGGTCTCCATGCTAGCCCGAGACC...TGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCTGGCTGTCTGGGATaGGCAGCTTTGAGAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTPGCLG*AALRAG Trigger: ACCTGCTCTCAAAGCTGCCCATCCCAGACAGCCAGG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCACCCTCTGCGGTGGTaGCTTTGGGGAGTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTHPLRW*LWGVTD Trigger: ATCAGTGACTCCCCAAAGCCACCACCGCAGAGGGTG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| 3UTR CAA 72 bp | AAGGGCCCTTGGTGCTCCCTGACTCGAGGCAGCTTTTaGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGPWCSLTRGSF*VWDSWHPAGSW Trigger: CCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGAGTCAGGGAGCACCAAGGGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGCTTTGGGGAGTCACTaGTGGGAGCCACGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTALGSH*WEPRSS Trigger: AGAAGATCGTGGCTCCCATCAGTGACTCCCCAAAGC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCGGGACAGCGTCTCCTTaGAAGGCCTGTCTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTGTASP*KACLSF Trigger: GAAACTGAGACAGGCCTTGCAAGGAGACGCTGTCCC...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR GCA 90 bp | TCGAGGCAGCTTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTGGGGTCCTCAGCACAGCTGCCTTaGCTTCCCCCGTGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRQLFGVGQLASGWVLGSSAQLP*LPPWPQ Trigger: TTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGA...GGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCCTCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCTTGATGGTAAGGACCTaGCTGTCTGGGATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPLMVRT*LSGMGS Trigger: GCTGCCCATCCCAGACAGCCAGGTCCTTACCATCAA...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGGGAAATGTGTCTGGGTCACCCTCTGCGGTaGTGGCTTTGGGGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSWHPAGSWGPSSWEMCLGHPLR*WLWGVT Trigger: AGTGACTCCCCAAAGCCACCACCGCAGAGGGTGACC...CAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCGTGGCCACAAAGATaGTACTTTGGGCTGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTPWPQR*YFGLRS Trigger: TGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR GCA 90 bp | TCAATGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGAGGGACCTTCAGCACAGCTaGCTTGCCTTCCCCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMPHTKGWVATSEELGQRDLQHS*LAFPRG Trigger: GCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGGTC...CCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTTGGTGTGGGACAGCTGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGGCTTTGGGGAGTCACTaGTGGGAGCCACGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFGVGQLASGWVLGSQLLALGSH*WEPRSS Trigger: AGAAGATCGTGGCTCCCATCAGTGACTCCCCAAAGC...CAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTCCCACACCAAAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR GCA 90 bp | TCAATGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGAGGGTTAGGGTCACCCTCTaGGGTGGTGGCTTTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMPHTKGWVATSEELGQRVRVTL*GGGFGE Trigger: CTCCCCAAAGCCACCACCGCAGAGGGTGACCCTAAC...CCTCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCTGTCTCAGTTTCCTaGCATAGTCCTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AASPLPQHPKCPRRAWRTPVSVS*HSPLQH Trigger: ATGCTGCAGAGGACTATGCCAGGAAACTGAGACAGG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCCTGTCTCAGTTTCCTaGCATAGTCCTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPPVSVS*HSPLQH Trigger: ATGCTGCAGAGGACTATGCCAGGAAACTGAGACAGG...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTGGCATCCGGCTGGGTCCTGGGGTCCCAGCTCCTGGGAAATGTGTCTGCCGTGGCCACAAAGATaGTACTTTGGGCTGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSWHPAGSWGPSSWEMCLPWPQR*YFGLRS Trigger: TGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGG...CAGACACATTTCCCAGGAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAATGCCACACACCAAGGGGTGGGTGGCAACATCAGAGGAGCTGGGGCAGACACCCTCTGCGGTGGTaGCTTTGGGGAGTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQCHTPRGGWQHQRSWGRHPLRW*LWGVTD Trigger: ATCAGTGACTCCCCAAAGCCACCACCGCAGAGGGTG...TCTGCCCCAGCTCCTCTGATGTTGCCACCCACCCCTTGGTGTGTGGCATTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTCATCCAAAAGGCAGAGGTATTCACGCTGGGACGTGAGCAGTGTATATTACGTGCTCTCGGCGTaGTCGAAGGGCACGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRSSKRQRYSRWDVSSVYYVLSA*SKGTRR Trigger: GCGCCTCGTGCCCTTCGACCACGCCGAGAGCACGTA...ATATACACTGCTCACGTCCCAGCGTGAATACCTCTGCCTTTTGGATGACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | TTCACGCTGGGACGTGAGCAGTGTATATCCTGTCAGAGCTGCAAAGCCCAGCGGTTGATGGTAAGGACCTaGCTGTCTGGGATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLGREQCISCQSCKAQRLMVRT*LSGMGS Trigger: GCTGCCCATCCCAGACAGCCAGGTCCTTACCATCAA...CCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| 3UTR CAA 72 bp | GGGGCACCGCCTCCCCGTGCACCACCAGCAGTATCTTaGCTTTGTTCCTTAGATGGTTTGCTGTTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAPPPRAPPAVS*LCSLDGLLFGF Trigger: AAACCCAAACAGCAAACCATCTAAGGAACAAAGCAAAGATACTGCTGGTGGTGCACGGGGAGGCGGTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCTTTCCCAAAGCAAGAGTACTCACTCAAGGGTCAATGCCACACACCAAGAAGAGCGAACAGGTATaGCCGTCAGGGCCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFFPKARVLTQGSMPHTKKSEQV*PSGPTP Trigger: GGGAGTGGGCCCTGACGGCCATACCTGTTCGCTCTT...CTTGGTGTGTGGCATTGACCCTTGAGTGAGTACTCTTGCTTTGGGAAAGAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTGACCTCCTCCCATGAACAGTGGGGTGCTTCATTTCTTTCCCAAAGCAAGCCTGTCTCAGTTTCCTaGCATAGTCCTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLTSSHEQWGASFLSQSKPVSVS*HSPLQH Trigger: ATGCTGCAGAGGACTATGCCAGGAAACTGAGACAGG...CTTGCTTTGGGAAAGAAATGAAGCACCCCACTGTTCATGGGAGGAGGTCAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
||
| CDS GCA 90 bp | AGCGCGAAGCGGCCACGGTCCCCTTCCAGGCAGCTCGCGGCCCGCTaGGCCACCAGCTGCGCCAGCGACGCGCCCAGCTCTTGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAKRPRSPSRQLAAR*ATSCASDAPSSCGL Trigger: CAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAGCGGGCCGCGAGCTGCCTGGAAGGGGACCGTGGCCGCTTCGCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
||
| CDS GCA 90 bp | CCACGGTCCCCTTCCAGGCAGCTCGCGGCCCGCTGCGCCACCAGCTaGGCCAGCGACGCGCCCAGCTCTTGCGGGCTGGAGAAGACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSPSRQLAARCATS*ASDAPSSCGLEKTE Trigger: CTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAGCGGGCCGCGAGCTGCCTGGAAGGGGACCGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
||
| CDS GCA 90 bp | GCAGCCGGGCAGCTGCCTCGTCCAGGAACCAGCAGAGGGCGCCCGTaGGCGGCTGCACCAAGGCGGCGGGCAACGTGCCCTCCTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGQLPRPGTSRGRP*AAAPRRRATCPPCP Trigger: AGGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCTGGTTCCTGGACGAGGCAGCTGCCCGGCTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS GCA 90 bp | GAGCGGCGGCGGCGGGCAGGTCTCGGGCTAGCATGGAGACCAGGCTaGCGCCTGACAGACCAAGCGCGAAGCGGCCACGGTCCCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERRRRAGLGLAWRPG*RLTDQARSGHGPLP Trigger: TGGAAGGGGACCGTGGCCGCTTCGCGCTTGGTCTGTCAGGCGGCAGCCTGGTCTCCATGCTAGCCCGAGACCTGCCCGCCGCCGCCGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
||
| CDS GCA 90 bp | GCAGCTGCCTCGTCCAGGAACCAGCAGAGGGCGCCCGTGCGCGGCTaGACCAAGGCGGCGGGCAACGTGCCCTCCTTGTCCTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAASSRNQQRAPVRG*TKAAGNVPSLSSRM Trigger: CATCCTGGAGGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCTGGTTCCTGGACGAGGCAGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS GCA 90 bp | AGCAGAGGGCGCCCGTGCGCGGCTGCACCAAGGCGGCGGGCAACGTaGCCTCCTTGTCCTCCAGGATGCGCTTCAGCACAGCTGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGRPCAAAPRRRAT*PPCPPGCASAQLPC Trigger: GCAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCTGGGATGGGCAGCTTaGAGAGCAGGTGTGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AASPLPQHPKCPRRAWRTLGWAA*RAGVWG Trigger: CCCCCACACACCTGCTCTCAAAGCTGCCCATCCCAG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143441.2 |
||
| CDS GCA 90 bp | GGATGGGCAGCTTTGAGAGCAGGTGTGTCCGGTAGAGGCCGTACGTaGTCTCGGCGTGGTCGAAGGGCACGAGGCGCTCGTCGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWAALRAGVSGRGRT*SRRGRRARGARRRS Trigger: GCTTCTGCGACGAGCGCCTCGTGCCCTTCGACCACGCCGAGAGCACGTACGGCCTCTACCGGACACACCTGCTCTCAAAGCTGCCCATCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCTGGGATGGGCAGCTTaGAGAGCAGGTGTGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPLGWAA*RAGVSG Trigger: ACCGGACACACCTGCTCTCAAAGCTGCCCATCCCAG...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034264.11 |
||
| CDS CCA 90 bp | CTGGGATGGAACCGCCCCTCCAAGCACCAGGTCTGTAGGAGGGGATaGTCAGGGAAGAGCGAACAGGTATGGCCGTCAGGGCCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGWNRPSKHQVCRRG*SGKSEQVWPSGPTP Trigger: GGGAGTGGGCCCTGACGGCCATACCTGTTCGCTCTTCCCTGACCATCCCCTCCTACAGACCTGGTGCTTGGAGGGGCGGTTCCATCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138742.8 |
||
| CDS CCA 90 bp | TCCCGCTCCTGTAGGAGGGGATGGTCAGGGAAGAGCGAACAGGTATaGCCGTCAGGGCCCACTCCCAGGATCAGCAGGTCAAACACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSCRRGWSGKSEQV*PSGPTPRISRSNTG Trigger: CCCTGTGTTTGACCTGCTGATCCTGGGAGTGGGCCCTGACGGCCATACCTGTTCGCTCTTCCCTGACCATCCCCTCCTACAGGAGCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
||
| CDS TCA 90 bp | GGCAGGATTGATGGTAAGGACCTGGCTGTCTGGGATGGGCAGCTTTaGGAGCAGGTGTGTCCGGTAGAGGCCGTACGTGCTCTCGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRIDGKDLAVWDGQL*EQVCPVEAVRALGV Trigger: CACGCCGAGAGCACGTACGGCCTCTACCGGACACACCTGCTCTCAAAGCTGCCCATCCCAGACAGCCAGGTCCTTACCATCAATCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
||
| CDS TCA 90 bp | GAAGCGTTAGGGTCACCCTCTGCGGTGGTGGCTTTGGGGAGTCACTaGTGGGAGCCACGATCTTCTCCCGCTCCTGTAGGAGGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EALGSPSAVVALGSH*WEPRSSPAPVGGDG Trigger: ACCATCCCCTCCTACAGGAGCGGGAGAAGATCGTGGCTCCCATCAGTGACTCCCCAAAGCCACCACCGCAGAGGGTGACCCTAACGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
||
| CDS GCA 90 bp | GGGCAACGTGCCCTCCTTGTCCTCCAGGATGCGCTTCAGCACAGCTaGCTTGCCTTCCCCCGTGGCCACAAAGATGATACTTTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GQRALLVLQDALQHS*LAFPRGHKDDTLGC Trigger: GCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGCACGTTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS CCA 90 bp | CACCAGGTCTGTAGGAGGGGATGGTCAGGGAAGAGCGAACAGGTATaGCCGTCAGGGCCCACTCCCAGGATCAGCAGGTCAAACACAGGG | + |
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Preference number: 5 (lower is better) Translates to: HQVCRRGWSGKSEQV*PSGPTPRISRSNTG Trigger: CCCTGTGTTTGACCTGCTGATCCTGGGAGTGGGCCCTGACGGCCATACCTGTTCGCTCTTCCCTGACCATCCCCTCCTACAGACCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138742.8 |
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| CDS-3UTR CAA 90 bp | CAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCCACAAAGATGATACTTaGGGCTGCGTTCAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: QLVRSHNTRSAHGVHGAPHKDDT*GCVQHR Trigger: CCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTG...GGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTAGTCCGCTCCCACAACACCCGAAGTGCCCACGGCGTGCATGGCGCACCCACAAAGATGATACTTaGGGCTGCGTTCAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: AASPLPQHPKCPRRAWRTHKDDT*GCVQHR Trigger: CCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTG...GGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTTGTGGGAGCGGACTAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS TCA 90 bp | TGCGCTTCAGCACAGCTGCCTTGCCTTCCCCCGTGGCCACAAAGATaGTACTTTGGGCTGCGTTCAGCACAGGAAGCGTTAGGGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: CASAQLPCLPPWPQR*YFGLRSAQEALGSP Trigger: GGGTGACCCTAACGCTTCCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS CCA 90 bp | AGCACAGCTGCCTTGCCTTCCCCCGTGGCCACAAAGATGATACTTTaGGCTGCGTTCAGCACAGGAAGCGTTAGGGTCACCCTCTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: STAALPSPVATKMIL*AAFSTGSVRVTLCG Trigger: ACCGCAGAGGGTGACCCTAACGCTTCCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGTATATCCTGTCAGAGCTGCAAAGCCCAGCGGACAACCCCCAGACTCATCTGGGATGGGCAGCTTaGAGAGCAGGTGTGTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: AVYILSELQSPADNPQTHLGWAA*RAGVSG Trigger: ACCGGACACACCTGCTCTCAAAGCTGCCCATCCCAG...ATGAGTCTGGGGGTTGTCCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| CDS-3UTR CAA 90 bp | TTCACGCTGGGACGTGAGCAGTGTATATCCTGTCAGAGCTGCAAAGCCCAGCGGCACAAAGATGATACTTaGGGCTGCGTTCAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: FTLGREQCISCQSCKAQRHKDDT*GCVQHR Trigger: CCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTG...CCGCTGGGCTTTGCAGCTCTGACAGGATATACACTGCTCACGTCCCAGCGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127626.8 |
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| CDS GCA 72 bp | CGGCCACGGTCCCCTTCCAGGCAGCTCGCGGCCCGCTaGGCCACCAGCTGCGCCAGCGACGCGCCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RPRSPSRQLAAR*ATSCASDAPSS Trigger: AGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAGCGGGCCGCGAGCTGCCTGGAAGGGGACCGTGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
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| CDS GCA 72 bp | CCTTCCAGGCAGCTCGCGGCCCGCTGCGCCACCAGCTaGGCCAGCGACGCGCCCAGCTCTTGCGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSRQLAARCATS*ASDAPSSCGLE Trigger: CTCCAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAGCGGGCCGCGAGCTGCCTGGAAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
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| CDS CAA 90 bp | CGCGGCCCGCTGCGCCACCAGCTGCGCCAGCGACGCGCCCAGCTCTaGCGGGCTGGAGAAGACCGAGATGAGACTGGGCGCGGGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGPLRHQLRQRRAQL*RAGEDRDETGRGCC Trigger: GCAGCACCCGCGCCCAGTCTCATCTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAGCGGGCCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 |
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| CDS GCA 72 bp | CAGCTGCCTCGTCCAGGAACCAGCAGAGGGCGCCCGTaGGCGGCTGCACCAAGGCGGCGGGCAACGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: QLPRPGTSRGRP*AAAPRRRATCP Trigger: AGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCTGGTTCCTGGACGAGGCAGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS GCA 72 bp | TCGTCCAGGAACCAGCAGAGGGCGCCCGTGCGCGGCTaGACCAAGGCGGCGGGCAACGTGCCCTCCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRNQQRAPVRG*TKAAGNVPSLS Trigger: GGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCGCCCTCTGCTGGTTCCTGGACGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS GCA 72 bp | TGCGCCACCAGCTGCGCCAGCGACGCGCCCAGCTCTTaGGGGCTGGAGAAGACCGAGATGAGACTGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CATSCASDAPSS*GLEKTEMRLGA Trigger: CGCGCCCAGTCTCATCTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 |
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| CDS GCA 72 bp | CGGCGGGCAGGTCTCGGGCTAGCATGGAGACCAGGCTaGCGCCTGACAGACCAAGCGCGAAGCGGCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: RRAGLGLAWRPG*RLTDQARSGHG Trigger: ACCGTGGCCGCTTCGCGCTTGGTCTGTCAGGCGGCAGCCTGGTCTCCATGCTAGCCCGAGACCTGCCCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
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| CDS GCA 72 bp | CGCCCGTGCGCGGCTGCACCAAGGCGGCGGGCAACGTaGCCTCCTTGTCCTCCAGGATGCGCTTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RPCAAAPRRRAT*PPCPPGCASAQ Trigger: CTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCGCACGGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS CAA 72 bp | CTGCGCCACCAGCTGCGCCAGCGACGCGCCCAGCTCTaGCGGGCTGGAGAAGACCGAGATGAGACTGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LRHQLRQRRAQL*RAGEDRDETGR Trigger: GCGCCCAGTCTCATCTCGGTCTTCTCCAGCCCGCAAGAGCTGGGCGCGTCGCTGGCGCAGCTGGTGGCGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 |
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| CDS CAA 72 bp | CGCGGCTGCACCAAGGCGGCGGGCAACGTGCCCTCCTaGTCCTCCAGGATGCGCTTCAGCACAGCTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RGCTKAAGNVPS*SSRMRFSTAAL Trigger: CAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGCACGTTGCCCGCCGCCTTGGTGCAGCCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS GCA 72 bp | GCTTTGAGAGCAGGTGTGTCCGGTAGAGGCCGTACGTaGTCTCGGCGTGGTCGAAGGGCACGAGGCGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: ALRAGVSGRGRT*SRRGRRARGAR Trigger: ACGAGCGCCTCGTGCCCTTCGACCACGCCGAGAGCACGTACGGCCTCTACCGGACACACCTGCTCTCAAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
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| CDS TCA 72 bp | GGGTCACCCTCTGCGGTGGTGGCTTTGGGGAGTCACTaGTGGGAGCCACGATCTTCTCCCGCTCCTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPSAVVALGSH*WEPRSSPAPVG Trigger: TCCTACAGGAGCGGGAGAAGATCGTGGCTCCCATCAGTGACTCCCCAAAGCCACCACCGCAGAGGGTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
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| CDS TCA 72 bp | GATGGTAAGGACCTGGCTGTCTGGGATGGGCAGCTTTaGGAGCAGGTGTGTCCGGTAGAGGCCGTACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGKDLAVWDGQL*EQVCPVEAVRA Trigger: AGCACGTACGGCCTCTACCGGACACACCTGCTCTCAAAGCTGCCCATCCCAGACAGCCAGGTCCTTACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 |
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| CDS GCA 72 bp | GCCCTCCTTGTCCTCCAGGATGCGCTTCAGCACAGCTaGCTTGCCTTCCCCCGTGGCCACAAAGATGATACT | + |
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Preference number: 6 (lower is better) Translates to: ALLVLQDALQHS*LAFPRGHKDDT Trigger: AGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS CAA 90 bp | AACGTGCCCTCCTTGTCCTCCAGGATGCGCTTCAGCACAGCTGCCTaGCCTTCCCCCGTGGCCACAAAGATGATACTTTGGGCTGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: NVPSLSSRMRFSTAA*PSPVATKMILWAAF Trigger: GAACGCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGAGGGCACGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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| CDS CCA 72 bp | GGACAGCGTCTCCTTGCAAGGCCTGTCTCAGTTTCCTaGCATAGTCCTCTGCAGCATCCTCCACAGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GQRLLARPVSVS*HSPLQHPPQVG Trigger: CCCTACCTGTGGAGGATGCTGCAGAGGACTATGCCAGGAAACTGAGACAGGCCTTGCAAGGAGACGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 ENSMUST00000143441.2 |
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| CDS CCA 72 bp | GCCTTGCCTTCCCCCGTGGCCACAAAGATGATACTTTaGGCTGCGTTCAGCACAGGAAGCGTTAGGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: ALPSPVATKMIL*AAFSTGSVRVT Trigger: GGTGACCCTAACGCTTCCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
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| CDS TCA 72 bp | GCACAGCTGCCTTGCCTTCCCCCGTGGCCACAAAGATaGTACTTTGGGCTGCGTTCAGCACAGGAAGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: AQLPCLPPWPQR*YFGLRSAQEAL Trigger: TAACGCTTCCTGTGCTGAACGCAGCCCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000143441.2 |
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| CDS CCA 72 bp | TCCTCCACAGGTAGGGCAGGATTGATGGTAAGGACCTaGCTGTCTGGGATGGGCAGCTTTGAGAGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSTGRAGLMVRT*LSGMGSFESRC Trigger: ACACCTGCTCTCAAAGCTGCCCATCCCAGACAGCCAGGTCCTTACCATCAATCCTGCCCTACCTGTGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034264.11 ENSMUST00000127626.8 ENSMUST00000138742.8 ENSMUST00000143441.2 |
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| CDS CAA 72 bp | TCCTTGTCCTCCAGGATGCGCTTCAGCACAGCTGCCTaGCCTTCCCCCGTGGCCACAAAGATGATACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLSSRMRFSTAA*PSPVATKMILW Trigger: CCAAAGTATCATCTTTGTGGCCACGGGGGAAGGCAAGGCAGCTGTGCTGAAGCGCATCCTGGAGGACAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034264.11 ENSMUST00000143441.2 |
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