Pregenerated sensors for PGGHG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062031Ensembl transcript IDs: ENSMUST00000079403.11, ENSMUST00000163094.9, ENSMUST00000164580.3
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATCCAGGCCACAGCCTGCCCAGAGCCGGCCCCAGGAGTCTGCATaGATTGTATACAGAACACCCCTGGTCTGCAGCTGTAGGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TSRPQPAQSRPQESA*IVYRTPLVCSCRAS Trigger: TGAGGCCCTACAGCTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTCCTGGGGCCGGCTCTGGGCAGGCTGTGGCCTGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR GCA 90 bp | GCAGCTGTAGGGCCTCAGCAAAGCAGTCCTGGGCTTCAGCCTGGCTaGTACCCACAACAGTCAGAAACTCCCAGGTCCTGTCCTTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: AAVGPQQSSPGLQPG*YPQQSETPRSCPSP Trigger: AGGAGAAGGACAGGACCTGGGAGTTTCTGACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR GCA 90 bp | CTGGGTCCCATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCTTaGACTCTCCCAAGCAAACTTGGCTCCCTGGTAGCCCAGGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LGPINVLRADLQASA*TLPSKLGSLVAQVL Trigger: CAGAACCTGGGCTACCAGGGAGCCAAGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATGGGACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 90 bp | AGAACACCCCTGGTCTGCAGCTGTAGGGCCTCAGCAAAGCAGTCCTaGGCTTCAGCCTGGCTGCTACCCACAACAGTCAGAAACTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RTPLVCSCRASAKQS*ASAWLLPTTVRNSQ Trigger: CTGGGAGTTTCTGACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAGGGGTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 90 bp | AGAGCCGGCCCCAGGAGTCTGCATGGATTGTATACAGAACACCCCTaGTCTGCAGCTGTAGGGCCTCAGCAAAGCAGTCCTGGGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RAGPRSLHGLYTEHP*SAAVGPQQSSPGLQ Trigger: CTGAAGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTCCTGGGGCCGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 90 bp | AACAGACGTGTGAACAGGAAGTTAAGGCCTAGAGAGACAGGAAGGTaGGGAGATAAGGAGGGGAGGGTGCTGCGGTCAGCCCCAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: NRRVNRKLRPRETGR*GDKEGRVLRSAPNK Trigger: TTTGTTTGGGGCTGACCGCAGCACCCTCCCCTCCTTATCTCCCCACCTTCCTGTCTCTCTAGGCCTTAACTTCCTGTTCACACGTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CCA 90 bp | TCAGGGCTCCTCCCAGCGTACGGACTCGGTATTCTAGGATGGCCCTaGCGGCTTCTGGGTGGAACATCAAAATATTTGGGAACATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SGLLPAYGLGILGWP*RLLGGTSKYLGTSR Trigger: TCTGGATGTTCCCAAATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCCATCCTAGAATACCGAGTCCGTACGCTGGGAGGAGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAACTGCTCAGGTGGACCTaGGCCCTTGAGGGGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GLCTGCDLKCHRVLGKGELLRWT*ALEGSL Trigger: GAGGGACCCCTCAAGGGCTCAGGTCCACCTGAGCAG...TTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCATCCAGCCCACAGCAAACATGCTCCAGGTCATAGCAGGGCCCTGGGGCTCGGTATTCTAGGATaGCCCTGGCGGCTTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QFHPAHSKHAPGHSRALGLGILG*PWRLLG Trigger: ACCCAGAAGCCGCCAGGGCCATCCTAGAATACCGAG...CCCCAGGGCCCTGCTATGACCTGGAGCATGTTTGCTGTGGGCTGGATGGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTTGTGTGCACCCGAAGAGTaGTGCCTGCAGGAAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SARAVTSSVTESLEKAKLCAPEE*CLQEAP Trigger: GGGGGCTTCCTGCAGGCAGCACTCTTCGGGTGCACA...CAACTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTCTCCCAAGCAAACTTaGCTCCCTGGTAGCCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GSARAVTSSVTESLEKAKSPKQT*LPGSPG Trigger: ACCTGGGCTACCAGGGAGCCAAGTTTGCTTGGGAGA...CTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATGCTGCTGCTCAGCACTaGTGGCCAGGACCATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYAAAQH*WPGPWP Trigger: AGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCAGC...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGGTAGGAGATACCAGAGACAGATACTCTGGAGACCAGGTCTGGACACAGTGGCTGATGAATCCTTaGGTGCCAGGCTGGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PQVGDTRDRYSGDQVWTQWLMNP*VPGWGS Trigger: GCTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCA...CTGTGTCCAGACCTGGTCTCCAGAGTATCTGTCTCTGGTATCTCCTACCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CCA 90 bp | CATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCTTGCACTCTCCCAAGCAATCCTGGGCTTCAGCCTaGCTGCTACCCACAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: HKCPQGRPPGQCLHSPKQSWASA*LLPTTV Trigger: GACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGA...TTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCATCCAGCCCACAGCAAACATGCTCCAGGTCATAGCAGGGCCCTGGGGCCCCAGGAGTCTGCATaGATTGTATACAGAACACCC | + |
|
Preference number: 2 (lower is better) Translates to: QFHPAHSKHAPGHSRALGPQESA*IVYRTP Trigger: GGGTGTTCTGTATACAATCCATGCAGACTCCTGGGG...CCCCAGGGCCCTGCTATGACCTGGAGCATGTTTGCTGTGGGCTGGATGGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CAA 90 bp | AAGAAGTTCACTGCACCAGACCCGTCTGCATTCTCCGTCCACACCTaGAAGGGCTCAGTGACATTGGCGAAACTCCTGCTCAGGTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: KKFTAPDPSAFSVHT*KGSVTLAKLLLRWT Trigger: GGTCCACCTGAGCAGGAGTTTCGCCAATGTCACTGAGCCCTTCAAGGTGTGGACGGAGAATGCAGACGGGTCTGGTGCAGTGAACTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTGTGTCCCAGAGGAACTaGAAGGGACTTCTAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: SAPNKGSVRPREPRTGEGVSQRN*KGLLMP Trigger: TGGCATTAGAAGTCCCTTTCAGTTCCTCTGGGACAC...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTGGTACATCTTGTCCTaGGAGCTCCATTCTACACGG | + |
|
Preference number: 2 (lower is better) Translates to: GSARAVTSSVTESLEKAKWYILS*ELHSTR Trigger: CCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCA...CTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCTTGGCTAGCCCTACCTaGTGTCAACTGCCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GETLRMEVKATLLLSTDGLASPT*CQLPAT Trigger: TGTGGCAGGCAGTTGACACCAGGTAGGGCTAGCCAA...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTACTCTGGTCGCCAGTCTaGCTTCATTTACCCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QVGLVQEHRVYQDRGPTLLWSPV*LHLPCP Trigger: AGGACAGGGTAAATGAAGTCAGACTGGCGACCAGAG...TAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGTAGGAGATACCAGAGACAGATACTCTGGAGACCAGGTCTGGACACAGGGCCCTGGCGGCTTCTaGGTGGAACATCAAAATATT | + |
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Preference number: 2 (lower is better) Translates to: PQVGDTRDRYSGDQVWTQGPGGF*VEHQNI Trigger: AATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCC...CTGTGTCCAGACCTGGTCTCCAGAGTATCTGTCTCTGGTATCTCCTACCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTACATCTTGTCCTGGGAGCTCCATTCTACACGGCTACACCAAAACTCAGCCCTCCAGGCCAGTGCTTaGACTCTCCCAAGCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: WYILSWELHSTRLHQNSALQASA*TLPSKL Trigger: AAGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAG...GGCTGAGTTTTGGTGTAGCCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR GCA 90 bp | GCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTTGATCAGTCAAGAAGTTCACTaGACCAGACCCGTCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: ARAVTSSVTESLEKAKLISQEVH*TRPVCI Trigger: AATGCAGACGGGTCTGGTGCAGTGAACTTCTTGACT...GATCAACTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGAGGAGGGGAGGGTGCTaGGGTCAGCCCCAAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SDVRKESKTRKFKAAKPLRRGGC*GQPQTK Trigger: CTTTGTTTGGGGCTGACCGCAGCACCCTCCCCTCCT...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CAA 90 bp | ATTCTAGGATGGCCCTGGCGGCTTCTGGGTGGAACATCAAAATATTaGGGAACATCCAGATGTCCTGATCCCAGAAGATATGGCCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ILGWPWRLLGGTSKY*GTSRCPDPRRYGPS Trigger: ACTGGGGCCATATCTTCTGGGATCAGGACATCTGGATGTTCCCAAATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCCATCCTAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTGTGTCCCAGAGGAACTaGAAGGGACTTCTAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: LVASLTSFTLSCDNTAFLVSQRN*KGLLMP Trigger: TGGCATTAGAAGTCCCTTTCAGTTCCTCTGGGACAC...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR TCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGTCCCACCTAGCCTGCTaGCCAGAGTTTCCCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ARYHLTSERNQRLGSSKPSHLAC*PEFPRE Trigger: TTCTCTGGGAAACTCTGGTCAGCAGGCTAGGTGGGA...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR-3UTR CCA 90 bp | CATAAGTCTCCAAGTTTTTCCTGTTCTGGACCAGGACATTGGTGTAGACAGAGTTCAGCAAAGCAGTCCTaGGCTTCAGCCTGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: HKSPSFSCSGPGHWCRQSSAKQS*ASAWLL Trigger: TAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGA...ACTCTGTCTACACCAATGTCCTGGTCCAGAACAGGAAAAACTTGGAGACTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CAA 90 bp | CCAAAACTCAGCCACAGAACTGACCACATCCCAGCCACCATCCTCTaGGAAGAGCTTCGAGTCCTGAGTGTAATAGTAATACAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PKLSHRTDHIPATIL*EELRVLSVIVIQLK Trigger: TTTCAGCTGTATTACTATTACACTCAGGACTCGAAGCTCTTCCAAGAGGATGGTGGCTGGGATGTGGTCAGTTCTGTGGCTGAGTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | GGAGGGTGCTGCGGTCAGCCCCAAACAAAGGATCTGTaGGGCCTAGAGAGCCCAGGACTGGCGAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GGCCGQPQTKDL*GLESPGLARVR Trigger: CCTCACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGACCGCAGCACCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR GCA 72 bp | CAGGCCACAGCCTGCCCAGAGCCGGCCCCAGGAGTCTaGATGGATTGTATACAGAACACCCCTGGTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QATACPEPAPGV*MDCIQNTPGLQ Trigger: CTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTCCTGGGGCCGGCTCTGGGCAGGCTGTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 72 bp | CGCTGCTGCTCAGCACTGATGGCCAGGACCATGGCCTaGAACCCTGTCCATCTGACTCCATTCCCTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: RCCSALMARTMA*NPVHLTPFPLV Trigger: GACCAGAGGGAATGGAGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CCA 72 bp | CCACAGCCTGCCCAGAGCCGGCCCCAGGAGTCTGCATaGATTGTATACAGAACACCCCTGGTCTGCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PQPAQSRPQESA*IVYRTPLVCSC Trigger: ACAGCTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTCCTGGGGCCGGCTCTGGGCAGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | TCAGTGACATTGGCGAAACTCCTGCTCAGGTGGACCTaGGCCCTTGAGGGGTCCCTCAGTTCCATCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SVTLAKLLLRWT*ALEGSLSSIQP Trigger: GGGCTGGATGGAACTGAGGGACCCCTCAAGGGCTCAGGTCCACCTGAGCAGGAGTTTCGCCAATGTCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 72 bp | CTGGTCTGCAGCTGTAGGGCCTCAGCAAAGCAGTCCTaGGCTTCAGCCTGGCTGCTACCCACAACAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVCSCRASAKQS*ASAWLLPTTVR Trigger: TCTGACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | AAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTaGTGGCCAGGACCATGGCCTGGAACCCTGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: KNGSEGHAAAQH*WPGPWPGTLSI Trigger: GATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CCA 72 bp | TGTAGGGCCTCAGCAAAGCAGTCCTGGGCTTCAGCCTaGCTGCTACCCACAACAGTCAGAAACTCCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: CRASAKQSWASA*LLPTTVRNSQV Trigger: GACCTGGGAGTTTCTGACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGAGGCCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGGTAGGAGATACCAGAGACAGATACTCTGGAGACCAGGTCTGGACACAGATGGCTGATGAATCCTaGAGTGCCAGGCTGGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PQVGDTRDRYSGDQVWTQMADES*SARLGK Trigger: CTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCAT...CTGTGTCCAGACCTGGTCTCCAGAGTATCTGTCTCTGGTATCTCCTACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR GCA 72 bp | GAGTCTGCATGGATTGTATACAGAACACCCCTGGTCTaGAGCTGTAGGGCCTCAGCAAAGCAGTCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: ESAWIVYRTPLV*SCRASAKQSWA Trigger: AGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 72 bp | CCCAGGAGTCTGCATGGATTGTATACAGAACACCCCTaGTCTGCAGCTGTAGGGCCTCAGCAAAGCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRSLHGLYTEHP*SAAVGPQQSSP Trigger: AGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAGGGGTGTTCTGTATACAATCCATGCAGACTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 72 bp | CCTGTGATAACACTGCCTTCCTTCTCACGGGCTGAGTaGTTAAGGACAGCTCTCACCTTAGCCCAGTACGCT | + |
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Preference number: 3 (lower is better) Translates to: PVITLPSFSRAE*LRTALTLAQYA Trigger: AGCGTACTGGGCTAAGGTGAGAGCTGTCCTTAACCACTCAGCCCGTGAGAAGGAAGGCAGTGTTATCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CCA 72 bp | CTCCCAGCGTACGGACTCGGTATTCTAGGATGGCCCTaGCGGCTTCTGGGTGGAACATCAAAATATTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LPAYGLGILGWP*RLLGGTSKYLG Trigger: TCCCAAATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCCATCCTAGAATACCGAGTCCGTACGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR-3UTR CAA 90 bp | TGGTACATCTTGTCCTGGGAGCTCCATTCTACACGGCTACACCAAAACTCAGCCAAGGCCACAGCCCCATaGATATGGATCTCCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: WYILSWELHSTRLHQNSAKATAP*IWISWV Trigger: GACCCAGGAGATCCATATCAATGGGGCTGTGGCCTT...GGCTGAGTTTTGGTGTAGCCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | CTGTCCTGTGATAACACTGCCTTCCTTCTCACGGGCTaGGTGGTTAAGGACAGCTCTCACCTTAGCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: LSCDNTAFLLTG*VVKDSSHLSPV Trigger: TACTGGGCTAAGGTGAGAGCTGTCCTTAACCACTCAGCCCGTGAGAAGGAAGGCAGTGTTATCACAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| 3UTR CCA 72 bp | GGGGGCATGACTCCTTTCAGGTGGTACATCTTGTCCTaGGAGCTCCATTCTACACGGCTACACCAAAACTCA | + |
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Preference number: 3 (lower is better) Translates to: GGMTPFRWYILS*ELHSTRLHQNS Trigger: TGAGTTTTGGTGTAGCCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCACCTGAAAGGAGTCATGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | CCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTTaGTCTTGTTCCCCAGGTAGGAGATACCAGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: PQVSPSPWKRRS*SCSPGRRYQRQ Trigger: CTGTCTCTGGTATCTCCTACCTGGGGAACAAGATCAACTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR CCA 72 bp | GGCCCTGGCGGCTTCTGGGTGGAACATCAAAATATTTaGGAACATCCAGATGTCCTGATCCCAGAAGATATG | + |
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Preference number: 3 (lower is better) Translates to: GPGGFWVEHQNI*EHPDVLIPEDM Trigger: CATATCTTCTGGGATCAGGACATCTGGATGTTCCCAAATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| 3UTR TCA 72 bp | GATGCAGTTGAGGGCAAAAGAGTGTCCCAGAGGAACTaGAAGGGACTTCTAATGCCAAAACTCCTATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DAVEGKRVSQRN*KGLLMPKLLSG Trigger: TCCTGATAGGAGTTTTGGCATTAGAAGTCCCTTTCAGTTCCTCTGGGACACTCTTTTGCCCTCAACTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079403.11 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAAGTTGATCTTGTTCCCCAGGTAGGAGATACCAGAGACAGATACTCTGGAGGAACATCAAAATATTaGGGAACATCCAGATGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GEVDLVPQVGDTRDRYSGGTSKY*GTSRCP Trigger: AGGACATCTGGATGTTCCCAAATATTTTGATGTTCC...TCCAGAGTATCTGTCTCTGGTATCTCCTACCTGGGGAACAAGATCAACTTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGTGCTGCGGTCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCCAGCTGTTCTGTCCCTaGAGGGGCCTCCAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRVLRSAPNKGSVRPREPQLFCP*RGLQLD Trigger: GTCCAGCTGGAGGCCCCTGCAGGGACAGAACAGCTG...GGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGACCGCAGCACCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTAGCATTCCTCCTTACTCCCATTGGAGAGTCCTCCGGGGCTAAGCCCATGGGGGGCTGGGCAGACTaGCCCGGTGAGTGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVAFLLTPIGESSGAKPMGGWAD*PGECPR Trigger: TCGGGGACACTCACCGGGCCAGTCTGCCCAGCCCCC...CATGGGCTTAGCCCCGGAGGACTCTCCAATGGGAGTAAGGAGGAATGCTACTGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTCAGCACTGATGGCCAGGACCATGGCCTGGAACCCTGTCCATCTGACTCAGCTGTTCTGTCCCTaGAGGGGCCTCCAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CCSALMARTMAWNPVHLTQLFCP*RGLQLD Trigger: GTCCAGCTGGAGGCCCCTGCAGGGACAGAACAGCTG...AGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAACAGCTGTTCTGTCCCTaGAGGGGCCTCCAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCTGCDLKCHRVLGKGEQLFCP*RGLQLD Trigger: GTCCAGCTGGAGGCCCCTGCAGGGACAGAACAGCTG...TTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCAGGCCACAGCCTGCCCAGAGCCGGCCCCAGGAGTCTGCATGGATTGTAGGCCATGCAGGTACCTaGAAGGGCATAGCTGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSRPQPAQSRPQESAWIVGHAGT*KGIAES Trigger: CGACTCAGCTATGCCCTTGCAGGTACCTGCATGGCC...TACAATCCATGCAGACTCCTGGGGCCGGCTCTGGGCAGGCTGTGGCCTGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTCAGCACTGATGGCCAGGACCATGGCCTGGAACCCTGTCCATCTGACTCATTGGCGAAACTCCTaGTCAGGTGGACCTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCSALMARTMAWNPVHLTHWRNS*SGGPEP Trigger: GGGCTCAGGTCCACCTGAGCAGGAGTTTCGCCAATG...AGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | TATGGATCTCCTGGGTCCCATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCACGCAGGTCCAGGTCTaGGCTTTCGGGGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGSHKCPQGRPPGQCTQVQV*AFGGEV Trigger: GACTTCTCCCCCGAAAGCCCAGACCTGGACCTGCGT...GCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATGGGACCCAGGAGATCCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTATGCACTTCCTGCTGTaGCTCTCCAGGCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPNKGSVRPREPRTGEGMHFLL*LSRLLR Trigger: CCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCAT...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCAGCACTGATGGCCAGGACCATGGCCTGGAACCCTGTCCATCTGACTTTGTATCCGGCCAGCTaGGTGGGGAAAGGAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCSALMARTMAWNPVHLTLYPAS*VGKGDL Trigger: AAGGTCTCCTTTCCCCACTCAGCTGGCCGGATACAA...AGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGCACGGGCTGTGACCTCAAGTGTCACCGAGTCCTTGGAAAAGGCGAAGTGTGGCTCTCCAGGCTaGTCAGGGTTAAGTACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSARAVTSSVTESLEKAKCGSPG*SGLSTW Trigger: CCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACA...CTTCGCCTTTTCCAAGGACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR GCA 90 bp | GATAAGGAGGGGAGGGTGCTGCGGTCAGCCCCAAACAAAGGATCTGTGAGGCCTAGCATATGCACTTCCTaGTGTGGCTCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKEGRVLRSAPNKGSVRPSICTS*CGSPGC Trigger: GCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCT...AGGCCTCACAGATCCTTTGTTTGGGGCTGACCGCAGCACCCTCCCCTCCTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTCAGCACTGATGGCCAGGACCATGGCCTGGAACCCTGTCCATCTGACTAGCATATGCACTTCCTaGTGTGGCTCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCSALMARTMAWNPVHLTSICTS*CGSPGC Trigger: GCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCT...AGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCTGTGCACCCGAAGAGTaGTGCCTGCAGGAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GETLRMEVKATLLLSTDGCAPEE*CLQEAP Trigger: GGGGGCTTCCTGCAGGCAGCACTCTTCGGGTGCACA...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTATGAGTTCGTTACAGTaGCCCAGAGCCTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAPNKGSVRPREPRTGEGMSSLQ*PRAWGH Trigger: GTGACCCCAGGCTCTGGGCCACTGTAACGAACTCAT...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGGGGGGCTGGGCAGACTaGCCCGGTGAGTGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RYEPCSGETLRMEVKATLGGWAD*PGECPR Trigger: TCGGGGACACTCACCGGGCCAGTCTGCCCAGCCCCC...CAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| 3UTR CAA 72 bp | GAGTCCTCCGGGGCTAAGCCCATGGCTGATGAATCCTaGAGTGCCAGGCTGGGGAAGCTCACTGAACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESSGAKPMADES*SARLGKLTEQV Trigger: TACCTGTTCAGTGAGCTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCATGGGCTTAGCCCCGGAGGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCGGGCAGCTATGGGGATaGCCTTTGTATCCGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GETLRMEVKATLLLSTDGGQLWG*PLYPAS Trigger: GCTGGCCGGATACAAAGGTCATCCCCATAGCTGCCC...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTCTCCAGGCCAGTGCTTaGACTCTCCCAAGCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPNKGSVRPREPRTGEGLQASA*TLPSKL Trigger: AAGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAG...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTCAGGAGCACAACATCTaGCTGCTTCACCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPNKGSVRPREPRTGEGQEHNI*LLHLFS Trigger: GGAGAAGAGGTGAAGCAGGCAGATGTTGTGCTCCTG...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATTGTGCACCCGAAGAGTaGTGCCTGCAGGAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYCAPEE*CLQEAP Trigger: GGGGGCTTCCTGCAGGCAGCACTCTTCGGGTGCACA...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTTCCTGGGCTTCAGCCTaGCTGCTACCCACAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLGTGAQGLPGSWSYASWASA*LLPTTV Trigger: GACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGA...AGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGCTGGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCTCCTGGGCTTCAGCCTaGCTGCTACCCACAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRAGSRLRGCEVGDAVEGSWASA*LLPTTV Trigger: GACTGTTGTGGGTAGCAGCCAGGCTGAAGCCCAGGA...GCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCCAGCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| 3UTR CAA 72 bp | ACTGCACCAGACCCGTCTGCATTCTCCGTCCACACCTaGAAGGGCTCAGTGACATTGGCGAAACTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAPDPSAFSVHT*KGSVTLAKLLL Trigger: GAGCAGGAGTTTCGCCAATGTCACTGAGCCCTTCAAGGTGTGGACGGAGAATGCAGACGGGTCTGGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGTGCTGCGGTCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCATATGGATGGTGTCATaGTACACACGTGTACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVLRSAPNKGSVRPREPIWMVS*YTRVPR Trigger: CCTAGGTACACGTGTGTATCATGACACCATCCATAT...GGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGACCGCAGCACCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTTTGTATCCGGCCAGCTaGGTGGGGAAAGGAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLGTGAQGLPGSWSYALYPAS*VGKGDL Trigger: AAGGTCTCCTTTCCCCACTCAGCTGGCCGGATACAA...AGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | CATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCTTGCACTCTCCCAAGCAAAGCATATGCACTTCCTaGTGTGGCTCTCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKCPQGRPPGQCLHSPKQSICTS*CGSPGC Trigger: GCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCT...TTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGGGGGCTGGGCAGACTaGCCCGGTGAGTGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLRYEPCSGETLRMEVKGGWAD*PGECPR Trigger: TCGGGGACACTCACCGGGCCAGTCTGCCCAGCCCCC...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | AGAACACCCCTGGTCTGCAGCTGTAGGGCCTCAGCAAAGCAGTCCTGGGCTTCATCAGGGTTAAGTACGTaGCCATGCAGGTACCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPLVCSCRASAKQSWASSGLST*PCRYLQ Trigger: TTGCAGGTACCTGCATGGCCACGTACTTAACCCTGA...TGAAGCCCAGGACTGCTTTGCTGAGGCCCTACAGCTGCAGACCAGGGGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR TCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGTGGCTGATGAATCCTTaGGTGCCAGGCTGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVWLMNP*VPGWGS Trigger: GCTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCA...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCAGACCTCCAGGCCAGTaGTTGCACTCTCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GETLRMEVKATLLLSTDGRPPGQ*LHSPKQ Trigger: TTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCT...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTCTCACGACGCAGGTCCAGGTCTaGGCTTTCGGGGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLTSFTLSCDNTAFLLTTQVQV*AFGGEV Trigger: GACTTCTCCCCCGAAAGCCCAGACCTGGACCTGCGT...CGTGAGAAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | GAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCTGGCTGATGAATCCTTaGGTGCCAGGCTGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPCSGETLRMEVKATLLLWLMNP*VPGWGS Trigger: GCTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCA...GAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCAGCACTGATGGCCAGGACCATGGCCTGGAACCCTGTCCATCTGACTAGTCAAATGGTATCTTaGTCCTATCAGCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCSALMARTMAWNPVHLTSQMVS*SYQPPP Trigger: TGGAGGTGGCTGATAGGATCAAGATACCATTTGACT...AGTCAGATGGACAGGGTTCCAGGCCATGGTCCTGGCCATCAGTGCTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGCTGCTCAGGTGGACCTaGGCCCTTGAGGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDVRKESKTRKFKAAKPLLLRWT*ALEGSL Trigger: GAGGGACCCCTCAAGGGCTCAGGTCCACCTGAGCAG...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | CGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGGCTCTGCACGGGCTGTaGCCTCAAGTGTCACCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RYEPCSGETLRMEVKATLALHGL*PQVSPS Trigger: ACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGC...CAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGTGTGGCTCTCCAGGCTaGTCAGGGTTAAGTACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVCGSPG*SGLSTW Trigger: CCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACA...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | CATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCTTGCACTCTCCCAAGCAATTAAGTACGTGGCCATaGAGGTACCTGCAAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HKCPQGRPPGQCLHSPKQLSTWP*RYLQGH Trigger: ATGCCCTTGCAGGTACCTGCATGGCCACGTACTTAA...TTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATATGAGTTCGTTACAGTaGCCCAGAGCCTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYMSSLQ*PRAWGH Trigger: GTGACCCCAGGCTCTGGGCCACTGTAACGAACTCAT...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTACATCTTGTCCTGGGAGCTCCATTCTACACGGCTACACCAAAACTCAGCATGAGTTCGTTACAGTaGCCCAGAGCCTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVHLVLGAPFYTATPKLSMSSLQ*PRAWGH Trigger: GTGACCCCAGGCTCTGGGCCACTGTAACGAACTCAT...GCTGAGTTTTGGTGTAGCCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | GCACTGACTTTAATTAGCCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGACGCAGGTCCAGGTCTaGGCTTTCGGGGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTLISQVGLVQEHRVYQTQVQV*AFGGEV Trigger: GACTTCTCCCCCGAAAGCCCAGACCTGGACCTGCGT...CTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGGCTAATTAAAGTCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATTCAGCAAAGCAGTCCTaGGCTTCAGCCTGGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYSAKQS*ASAWLL Trigger: TAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGA...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTCCCCAGGAGTCTGCATaGATTGTATACAGAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLGTGAQGLPGSWSYAPQESA*IVYRTP Trigger: GGGTGTTCTGTATACAATCCATGCAGACTCCTGGGG...AGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATTCTGGAGACCAGGTCTaGACACAGGGGGTCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYSGDQV*TQGVKG Trigger: ACCTTTGACCCCCTGTGTCCAGACCTGGTCTCCAGA...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGCTCCAGGCCAGTGCTTaGACTCTCCCAAGCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVLQASA*TLPSKL Trigger: AAGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAG...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGAGCACAACATCTGCCTaGTTCACCTCTTCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVSTTSA*FTSSPR Trigger: GCGTGGAGAAGAGGTGAAGCAGGCAGATGTTGTGCT...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTACCCCAGGAGTCTGCATaGATTGTATACAGAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QVGLVQEHRVYQDRGPTLPQESA*IVYRTP Trigger: GGGTGTTCTGTATACAATCCATGCAGACTCCTGGGG...TAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTATTCTAGGATGGCCCTaGCGGCTTCTGGGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVASLTSFTLSCDNTAFLILGWP*RLLGGT Trigger: TGTTCCACCCAGAAGCCGCCAGGGCCATCCTAGAAT...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGGCAAACCCAAGTCCTTaGCCAAAGCAGCAGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVANPSP*PKQQRS Trigger: ACTTCGCTGCTGCTTTGGCCAAGGACTTGGGTTTGC...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | ATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACTGCTCAGGTGGACCTaGGCCCTTGAGGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSDVRKESKTRKFKAAKLLRWT*ALEGSL Trigger: GAGGGACCCCTCAAGGGCTCAGGTCCACCTGAGCAG...TTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGGCTCTGCACGGGCTGTaGCCTCAAGTGTCACCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARYHLTSERNQRLGSSKPALHGL*PQVSPS Trigger: ACTCGGTGACACTTGAGGTCACAGCCCGTGCAGAGC...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTCTCACGAGCACAACATCTGCCTaGTTCACCTCTTCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLTSFTLSCDNTAFLLTSTTSA*FTSSPR Trigger: GCGTGGAGAAGAGGTGAAGCAGGCAGATGTTGTGCT...CGTGAGAAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCCAGGAGCACAACATCTaGCTGCTTCACCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPCSGETLRMEVKATLLLQEHNI*LLHLFS Trigger: GGAGAAGAGGTGAAGCAGGCAGATGTTGTGCTCCTG...GAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | TATGGATCTCCTGGGTCCCATAAATGTCCTCAGGGCAGACCTCCAGGCCAGTGCCACCGTTTATATGGATaGTGTCATGATACACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: YGSPGSHKCPQGRPPGQCHRLYG*CHDTHV Trigger: CACGTGTGTATCATGACACCATCCATATAAACGGTG...GCACTGGCCTGGAGGTCTGCCCTGAGGACATTTATGGGACCCAGGAGATCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGGAAGAGCTTCGAGTCCTGAGTGTAATAGTAATACAGCTGAAAGGCCAATGCACTTCCTGCTGTaGCTCTCCAGGCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGRASSPECNSNTAERPMHFLL*LSRLLR Trigger: CCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCAT...TGGCCTTTCAGCTGTATTACTATTACACTCAGGACTCGAAGCTCTTCCAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | GCACTGACTTTAATTAGCCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGATTCTAGGATGGCCCTaGCGGCTTCTGGGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTLISQVGLVQEHRVYQILGWP*RLLGGT Trigger: TGTTCCACCCAGAAGCCGCCAGGGCCATCCTAGAAT...CTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGGCTAATTAAAGTCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCAGTCAAATGGTATCTTaGTCCTATCAGCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GETLRMEVKATLLLSTDGSQMVS*SYQPPP Trigger: TGGAGGTGGCTGATAGGATCAAGATACCATTTGACT...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGCATTGGCGAAACTCCTaGTCAGGTGGACCTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDVRKESKTRKFKAAKPLHWRNS*SGGPEP Trigger: GGGCTCAGGTCCACCTGAGCAGGAGTTTCGCCAATG...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGAGTCAAGAAGTTCACTaGACCAGACCCGTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVSQEVH*TRPVCI Trigger: AATGCAGACGGGTCTGGTGCAGTGAACTTCTTGACT...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTCACCGTTTATATGGATaGTGTCATGATACACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSWLGTGAQGLPGSWSYAHRLYG*CHDTHV Trigger: CACGTGTGTATCATGACACCATCCATATAAACGGTG...AGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGATGCACTTCCTGCTGTaGCTCTCCAGGCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLRYEPCSGETLRMEVKMHFLL*LSRLLR Trigger: CCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCAT...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTGGCCCTGGCGGCTTCTaGGTGGAACATCAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LVASLTSFTLSCDNTAFLGPGGF*VEHQNI Trigger: AATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCC...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCTCGGTATTCTAGGATaGCCCTGGCGGCTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARYHLTSERNQRLGSSKPLGILG*PWRLLG Trigger: ACCCAGAAGCCGCCAGGGCCATCCTAGAATACCGAG...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTCTCACGTGGTACATCTTGTCCTaGGAGCTCCATTCTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLTSFTLSCDNTAFLLTWYILS*ELHSTR Trigger: CCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCA...CGTGAGAAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | GCACTGACTTTAATTAGCCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGCAAACCCAAGTCCTTaGCCAAAGCAGCAGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTLISQVGLVQEHRVYQANPSP*PKQQRS Trigger: ACTTCGCTGCTGCTTTGGCCAAGGACTTGGGTTTGC...CTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGGCTAATTAAAGTCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | GCACTGACTTTAATTAGCCAAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGGAAAGGAGACCTTCTaGTGTCAGGGGAAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTLISQVGLVQEHRVYQGKETF*CQGKMS Trigger: GCTCATCTTCCCCTGACACCAGAAGGTCTCCTTTCC...CTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGGCTAATTAAAGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164580.3 |
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| 3UTR CAA 72 bp | CCTTTGCCAGCACTGACTTTAATTAGCCAAGTTGGCTaGGTACAGGAGCACAGGGTTTACCAGGATCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPALTLISQVG*VQEHRVYQDRG Trigger: ACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTTGGCTAATTAAAGTCAGTGCTGGCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | GTGGTACATCTTGTCCTGGGAGCTCCATTCTACACGGCTACACCAAAACTCAGCATATGGATGGTGTCATaGTACACACGTGTACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVHLVLGAPFYTATPKLSIWMVS*YTRVPR Trigger: CCTAGGTACACGTGTGTATCATGACACCATCCATAT...GCTGAGTTTTGGTGTAGCCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| CDS-3UTR GCA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGAGACCTCCAGGCCAGTaGTTGCACTCTCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVLRYEPCSGETLRMEVKRPPGQ*LHSPKQ Trigger: TTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGGTCT...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGAAAGCAGCAGCGAAGTaGAGGCTGTTCTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVRKESKTRKFKAAKPLKAAAK*RLFWTR Trigger: CCTGGTCCAGAACAGCCTGCACTTCGCTGCTGCTTT...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGTCAGCAAAGCAGTCCTaGGCTTCAGCCTGGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARYHLTSERNQRLGSSKPSAKQS*ASAWLL Trigger: TAGCAGCCAGGCTGAAGCCCAGGACTGCTTTGCTGA...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGTCTCCCAAGCAAACTTaGCTCCCTGGTAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARYHLTSERNQRLGSSKPSPKQT*LPGSPG Trigger: ACCTGGGCTACCAGGGAGCCAAGTTTGCTTGGGAGA...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGTCTCCCAAGCAAACTTaGCTCCCTGGTAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVLRYEPCSGETLRMEVKSPKQT*LPGSPG Trigger: ACCTGGGCTACCAGGGAGCCAAGTTTGCTTGGGAGA...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGTCTGGAGACCAGGTCTaGACACAGGGGGTCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDVRKESKTRKFKAAKPLSGDQV*TQGVKG Trigger: ACCTTTGACCCCCTGTGTCCAGACCTGGTCTCCAGA...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| 3UTR CAA 72 bp | TGGCCCTGGCGGCTTCTGGGTGGAACATCAAAATATTaGGGAACATCCAGATGTCCTGATCCCAGAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: WPWRLLGGTSKY*GTSRCPDPRRY Trigger: ATATCTTCTGGGATCAGGACATCTGGATGTTCCCAAATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| 3UTR CAA 72 bp | AGCCACAGAACTGACCACATCCCAGCCACCATCCTCTaGGAAGAGCTTCGAGTCCTGAGTGTAATAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SHRTDHIPATIL*EELRVLSVIVI Trigger: TATTACTATTACACTCAGGACTCGAAGCTCTTCCAAGAGGATGGTGGCTGGGATGTGGTCAGTTCTGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CCA 90 bp | CCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTGGCCCTGGCGGCTTCTaGGTGGAACATCAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: PSDVRKESKTRKFKAAKPGPGGF*VEHQNI Trigger: AATATTTTGATGTTCCACCCAGAAGCCGCCAGGGCC...AGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGTGGTACATCTTGTCCTaGGAGCTCCATTCTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVRKESKTRKFKAAKPLWYILS*ELHSTR Trigger: CCGTGTAGAATGGAGCTCCCAGGACAAGATGTACCA...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTCTCACGCTGCTCAGAGTCAAATaGTATCTTGATCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLTSFTLSCDNTAFLLTLLRVK*YLDPIS Trigger: GCTGATAGGATCAAGATACCATTTGACTCTGAGCAG...CGTGAGAAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | GAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCCTGCTCAGAGTCAAATaGTATCTTGATCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPCSGETLRMEVKATLLLLLRVK*YLDPIS Trigger: GCTGATAGGATCAAGATACCATTTGACTCTGAGCAG...GAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | CCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCCATCAAACTCAGGGTaGAAGTTCTGCTCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSDVRKESKTRKFKAAKPPSNSG*KFCSES Trigger: TGACTCTGAGCAGAACTTCCACCCTGAGTTTGATGG...AGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR TCA 90 bp | GCTAGATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGATATGGATGGTGTCATaGTACACACGTGTACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARYHLTSERNQRLGSSKPIWMVS*YTRVPR Trigger: CCTAGGTACACGTGTGTATCATGACACCATCCATAT...CGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTATCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR GCA 90 bp | ATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAAAGTCAAGAAGTTCACTaGACCAGACCCGTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IPSDVRKESKTRKFKAAKSQEVH*TRPVCI Trigger: AATGCAGACGGGTCTGGTGCAGTGAACTTCTTGACT...TTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS-3UTR CCA 90 bp | ATACCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCATCAAACTCAGGGTaGAAGTTCTGCTCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPSDVRKESKTRKFKAAKPSNSG*KFCSES Trigger: TGACTCTGAGCAGAACTTCCACCCTGAGTTTGATGG...TTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS CCA 90 bp | TGCACTTCCTGCTGTGGCTCTCCAGGCTGCTCAGGGTTAAGTACGTaGCCATGCAGGTACCGGAGTCCCTGGAAGTCAGGCCCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: CTSCCGSPGCSGLST*PCRYRSPWKSGPTR Trigger: GCGTGTGGGGCCTGACTTCCAGGGACTCCGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
||
| CDS GCA 90 bp | TGTGTTGGTGTCCAGGGTAAAGGTCTCTGTCAGCTGTTCTGTCCCTaGAGGGGCCTCCAGCTGGACATTGAGGGGGCTGGGCAGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVGVQGKGLCQLFCP*RGLQLDIEGAGQTG Trigger: GCCAGTCTGCCCAGCCCCCTCAATGTCCAGCTGGAGGCCCCTGCAGGGACAGAACAGCTGACAGAGACCTTTACCCTGGACACCAACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
||
| CDS TCA 90 bp | TCAGGGTTAAGTACGTGGCCATGCAGGTACCTGCAAGGGCATAGCTaGGTCGGAGTCCCTGGAAGTCAGGCCCCACACGCAGGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGLSTWPCRYLQGHS*VGVPGSQAPHAGPG Trigger: ACCTGGACCTGCGTGTGGGGCCTGACTTCCAGGGACTCCGACTCAGCTATGCCCTTGCAGGTACCTGCATGGCCACGTACTTAACCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCCCAGCGTACGGACTCGGTATTCTAGGATGGCCCTGGCGGCTTCTGGGAGGAAGGAACCTGTGTaGGTGTCCAGGGTAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: APPSVRTRYSRMALAASGRKEPV*VSRVKV Trigger: GACCTTTACCCTGGACACCAACACAGGTTCCTTCCT...CCCAGAAGCCGCCAGGGCCATCCTAGAATACCGAGTCCGTACGCTGGGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| CDS GCA 90 bp | ACAGGCATCCATAGCATATGCACTTCCTGCTGTGGCTCTCCAGGCTaGTCAGGGTTAAGTACGTGGCCATGCAGGTACCGGAGTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGIHSICTSCCGSPG*SGLSTWPCRYRSPW Trigger: CCAGGGACTCCGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCTATGGATGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTATGGCTGATGAATCCTaGAGTGCCAGGCTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SAPNKGSVRPREPRTGEGMADES*SARLGK Trigger: CTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCAT...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCAAACAAAGGATCTGTGAGGCCTAGAGAGCCCAGGACTGGCGAGGGTAAGGCCACAGCCCCATaGATATGGATCTCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAPNKGSVRPREPRTGEGKATAP*IWISWV Trigger: GACCCAGGAGATCCATATCAATGGGGCTGTGGCCTT...ACCCTCGCCAGTCCTGGGCTCTCTAGGCCTCACAGATCCTTTGTTTGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 90 bp | TTTCTGGGCAGCTATGGGGATGACCTTTGTATCCGGCCAGCTGAGTaGGGAAAGGAGACCTTCTGGTGTCAGGGGAAGATGAGCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLGSYGDDLCIRPAE*GKETFWCQGKMSQR Trigger: TCGCTGGCTCATCTTCCCCTGACACCAGAAGGTCTCCTTTCCCCACTCAGCTGGCCGGATACAAAGGTCATCCCCATAGCTGCCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CAGTTCCATCCAGCCCACAGCAAACATGCTCCAGGTCATAGCAGGGCCCTGGGGTCCCCGACAGCTCCATaGTACACACCGTTTATATGG | + |
|
Preference number: 5 (lower is better) Translates to: QFHPAHSKHAPGHSRALGSPTAP*YTPFIW Trigger: CCATATAAACGGTGTGTACAATGGAGCTGTCGGGGA...CCCCAGGGCCCTGCTATGACCTGGAGCATGTTTGCTGTGGGCTGGATGGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| CDS-3UTR CAA 90 bp | CCAGTAGCATTCCTCCTTACTCCCATTGGAGAGTCCTCCGGGGCTAAGCCCATGGGCACTGTGATGGGTTaGTTCCCTGTGGTCAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: PVAFLLTPIGESSGAKPMGTVMG*FPVVKR Trigger: ACGCTTGACCACAGGGAACAAACCCATCACAGTGCC...CATGGGCTTAGCCCCGGAGGACTCTCCAATGGGAGTAAGGAGGAATGCTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| CDS-3UTR CAA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATGGTGGACCTGAGCCCTaGAGGGGTCCCTCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYGGPEP*RGPSVP Trigger: TGGAACTGAGGGACCCCTCAAGGGCTCAGGTCCACC...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCCCTCCAGGCCAGTGCTaGCACTCTCCCAAGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GETLRMEVKATLLLSTDGPPGQC*HSPKQT Trigger: AGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGG...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | TTCAGGGCTGGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAGGAAGGAACCTGTGTaGGTGTCCAGGGTAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FRAGSRLRGCEVGDAVEGRKEPV*VSRVKV Trigger: GACCTTTACCCTGGACACCAACACAGGTTCCTTCCT...GCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCCAGCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCATGGCTGATGAATCCTaGAGTGCCAGGCTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GETLRMEVKATLLLSTDGMADES*SARLGK Trigger: CTTCCCCAGCCTGGCACTCAAGGATTCATCAGCCAT...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCAAGGCCACAGCCCCATaGATATGGATCTCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GETLRMEVKATLLLSTDGKATAP*IWISWV Trigger: GACCCAGGAGATCCATATCAATGGGGCTGTGGCCTT...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCAGCACTGATGGCTTCTCCGTCCACACCTaGAAGGGCTCAGTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: GETLRMEVKATLLLSTDGFSVHT*KGSVTL Trigger: CAATGTCACTGAGCCCTTCAAGGTGTGGACGGAGAA...GCCATCAGTGCTGAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTGGCACTGTGATGGGTTaGTTCCCTGTGGTCAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LVASLTSFTLSCDNTAFLGTVMG*FPVVKR Trigger: ACGCTTGACCACAGGGAACAAACCCATCACAGTGCC...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGGTGGACCTGAGCCCTaGAGGGGTCCCTCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVLRYEPCSGETLRMEVKGGPEP*RGPSVP Trigger: TGGAACTGAGGGACCCCTCAAGGGCTCAGGTCCACC...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGGCCACGCTGCTGCTCTTCTCCGTCCACACCTaGAAGGGCTCAGTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: EPCSGETLRMEVKATLLLFSVHT*KGSVTL Trigger: CAATGTCACTGAGCCCTTCAAGGTGTGGACGGAGAA...GAGCAGCAGCGTGGCCTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GGATCCAGACTAAGAGGTTGTGAGGTTGGGGATGCAGTTGAGGGCAAAAGAGTGAGTGTCACCGAGTCCTaGGAAAAGGCGAAGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GSRLRGCEVGDAVEGKRVSVTES*EKAKLI Trigger: GATCAACTTCGCCTTTTCCAAGGACTCGGTGACACT...CACTCTTTTGCCCTCAACTGCATCCCCAACCTCACAACCTCTTAGTCTGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTTCCCCGACAGCTCCATaGTACACACCGTTTATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVASLTSFTLSCDNTAFLSPTAP*YTPFIW Trigger: CCATATAAACGGTGTGTACAATGGAGCTGTCGGGGA...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | GTGGTCCTACGCTATGAACCTTGTTCTGGAGAAACACTAAGAATGGAAGTGAAGCCTCCAGGCCAGTGCTaGCACTCTCCCAAGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VVLRYEPCSGETLRMEVKPPGQC*HSPKQT Trigger: AGTTTGCTTGGGAGAGTGCAAGCACTGGCCTGGAGG...CTTCACTTCCATTCTTAGTGTTTCTCCAGAACAAGGTTCATAGCGTAGGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS TCA 90 bp | TCCCCGACAGCTCCATTGTACACACCGTTTATATGGATGGTGTCATaGTACACACGTGTACCTAGGTATGAGTTCGTTACAGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTAPLYTPFIWMVS*YTRVPRYEFVTVAQ Trigger: CTGGGCCACTGTAACGAACTCATACCTAGGTACACGTGTGTATCATGACACCATCCATATAAACGGTGTGTACAATGGAGCTGTCGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTGGCACTGTGATGGGTTaGTTCCCTGTGGTCAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PSDVRKESKTRKFKAAKPGTVMG*FPVVKR Trigger: ACGCTTGACCACAGGGAACAAACCCATCACAGTGCC...AGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 90 bp | GGTGAGTGTCCCCGACAGCTCCATTGTACACACCGTTTATATGGATaGTGTCATGATACACACGTGTACCTAGGTATGAGTTCGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GECPRQLHCTHRLYG*CHDTHVYLGMSSLQ Trigger: CTGTAACGAACTCATACCTAGGTACACGTGTGTATCATGACACCATCCATATAAACGGTGTGTACAATGGAGCTGTCGGGGACACTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
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| CDS CCA 90 bp | CTCATAGCCATCAAACTCAGGGTGGAAGTTCTGCTCAGAGTCAAATaGTATCTTGATCCTATCAGCCACCTCCAGCCACTGTTTTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LIAIKLRVEVLLRVK*YLDPISHLQPLFSD Trigger: ATCCGAAAACAGTGGCTGGAGGTGGCTGATAGGATCAAGATACCATTTGACTCTGAGCAGAACTTCCACCCTGAGTTTGATGGCTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | TCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTCTGTCCCCGACAGCTCCATaGTACACACCGTTTATATGG | + |
|
Preference number: 5 (lower is better) Translates to: SDVRKESKTRKFKAAKPLSPTAP*YTPFIW Trigger: CCATATAAACGGTGTGTACAATGGAGCTGTCGGGGA...CAGAGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | AAGTTGGCTTGGTACAGGAGCACAGGGTTTACCAGGATCGTGGTCCTACGCTATGGAACATCAAAATATTaGGGAACATCCAGATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLAWYRSTGFTRIVVLRYGTSKY*GTSRCP Trigger: AGGACATCTGGATGTTCCCAAATATTTTGATGTTCC...ATAGCGTAGGACCACGATCCTGGTAAACCCTGTGCTCCTGTACCAAGCCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CCATCTGACGTCAGAAAGGAATCAAAGACTAGGAAGTTCAAAGCCGCAAAACCTAGTGTCACCGAGTCCTaGGAAAAGGCGAAGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSDVRKESKTRKFKAAKPSVTES*EKAKLI Trigger: GATCAACTTCGCCTTTTCCAAGGACTCGGTGACACT...AGGTTTTGCGGCTTTGAACTTCCTAGTCTTTGATTCCTTTCTGACGTCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS-3UTR CAA 90 bp | CTGGTCGCCAGTCTGACTTCATTTACCCTGTCCTGTGATAACACTGCCTTCCTTGGAACATCAAAATATTaGGGAACATCCAGATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVASLTSFTLSCDNTAFLGTSKY*GTSRCP Trigger: AGGACATCTGGATGTTCCCAAATATTTTGATGTTCC...AAGGAAGGCAGTGTTATCACAGGACAGGGTAAATGAAGTCAGACTGGCGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 72 bp | GGGTTAAGTACGTGGCCATGCAGGTACCGGAGTCCCTaGAAGTCAGGCCCCACACGCAGGTCCAGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLSTWPCRYRSP*KSGPTRRSRSG Trigger: CCCAGACCTGGACCTGCGTGTGGGGCCTGACTTCCAGGGACTCCGGTACCTGCATGGCCACGTACTTAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS GCA 72 bp | GTCCAGGGTAAAGGTCTCTGTCAGCTGTTCTGTCCCTaGAGGGGCCTCCAGCTGGACATTGAGGGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQGKGLCQLFCP*RGLQLDIEGAG Trigger: CCCAGCCCCCTCAATGTCCAGCTGGAGGCCCCTGCAGGGACAGAACAGCTGACAGAGACCTTTACCCTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
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| CDS GCA 72 bp | GGCTCTCCAGGCTGCTCAGGGTTAAGTACGTGGCCATaGAGGTACCGGAGTCCCTGGAAGTCAGGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GSPGCSGLSTWP*RYRSPWKSGPT Trigger: TGTGGGGCCTGACTTCCAGGGACTCCGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 72 bp | TGCTGTGGCTCTCCAGGCTGCTCAGGGTTAAGTACGTaGCCATGCAGGTACCGGAGTCCCTGGAAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCGSPGCSGLST*PCRYRSPWKSG Trigger: GCCTGACTTCCAGGGACTCCGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS GCA 72 bp | GGGAAAGGGGACTGGGTACCCCAGGAGCACAACATCTaGCTGCTTCACCTCTTCTCCACGCTCATAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: GKGDWVPQEHNI*LLHLFSTLIAI Trigger: GATGGCTATGAGCGTGGAGAAGAGGTGAAGCAGGCAGATGTTGTGCTCCTGGGGTACCCAGTCCCCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CAA 90 bp | TCAGCCACCTCCAGCCACTGTTTTCGGATAGGCAAACCCAAGTCCTaGGCCAAAGCAGCAGCGAAGTGCAGGCTGTTCTGGACCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SATSSHCFRIGKPKS*AKAAAKCRLFWTRT Trigger: TGTCCTGGTCCAGAACAGCCTGCACTTCGCTGCTGCTTTGGCCAAGGACTTGGGTTTGCCTATCCGAAAACAGTGGCTGGAGGTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS TCA 72 bp | AGTGGGGAAAGGAGACCTTCTGGTGTCAGGGGAAGATaGGCCAGCGATGGCCACAGCTCAGCTTCTAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGERRPSGVRGR*ASDGHSSASSR Trigger: CCTACTAGAAGCTGAGCTGTGGCCATCGCTGGCTCATCTTCCCCTGACACCAGAAGGTCTCCTTTCCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164580.3 |
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| CDS GCA 72 bp | CATAGCATATGCACTTCCTGCTGTGGCTCTCCAGGCTaGTCAGGGTTAAGTACGTGGCCATGCAGGTACCGG | + |
|
Preference number: 6 (lower is better) Translates to: HSICTSCCGSPG*SGLSTWPCRYR Trigger: CCGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS GCA 72 bp | CATAGCATATGCACTTCCTGCTGTGGCTCTCCAGGCTaGTCAGGGTTAAGTACGTGGCCATGCAGGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSICTSCCGSPG*SGLSTWPCRYL Trigger: CAGGTACCTGCATGGCCACGTACTTAACCCTGAGCAGCCTGGAGAGCCACAGCAGGAAGTGCATATGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163094.9 |
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| CDS CAA 72 bp | TCCAGCCACTGTTTTCGGATAGGCAAACCCAAGTCCTaGGCCAAAGCAGCAGCGAAGTGCAGGCTGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSHCFRIGKPKS*AKAAAKCRLFW Trigger: CCAGAACAGCCTGCACTTCGCTGCTGCTTTGGCCAAGGACTTGGGTTTGCCTATCCGAAAACAGTGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS TCA 72 bp | CAGGGTGGAAGTTCTGCTCAGAGTCAAATGGTATCTTaGTCCTATCAGCCACCTCCAGCCACTGTTTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGGSSAQSQMVS*SYQPPPATVFG Trigger: TCCGAAAACAGTGGCTGGAGGTGGCTGATAGGATCAAGATACCATTTGACTCTGAGCAGAACTTCCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CAA 72 bp | TCAGGGTGGAAGTTCTGCTCAGAGTCAAATGGTATCTaGATCCTATCAGCCACCTCCAGCCACTGTTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGWKFCSESNGI*ILSATSSHCFR Trigger: CCGAAAACAGTGGCTGGAGGTGGCTGATAGGATCAAGATACCATTTGACTCTGAGCAGAACTTCCACCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 72 bp | ATCAAACTCAGGGTGGAAGTTCTGCTCAGAGTCAAATaGTATCTTGATCCTATCAGCCACCTCCAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: IKLRVEVLLRVK*YLDPISHLQPL Trigger: CAGTGGCTGGAGGTGGCTGATAGGATCAAGATACCATTTGACTCTGAGCAGAACTTCCACCCTGAGTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CAA 90 bp | CCATCAAACTCAGGGTGGAAGTTCTGCTCAGAGTCAAATGGTATCTaGATCCTATCAGCCACCTCCAGCCACTGTTTTCGGATAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSNSGWKFCSESNGI*ILSATSSHCFRIGK Trigger: TTTGCCTATCCGAAAACAGTGGCTGGAGGTGGCTGATAGGATCAAGATACCATTTGACTCTGAGCAGAACTTCCACCCTGAGTTTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079403.11 ENSMUST00000164580.3 |
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| CDS CCA 72 bp | CCCCGACAGCTCCATTGTACACACCGTTTATATGGATaGTGTCATGATACACACGTGTACCTAGGTATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRQLHCTHRLYG*CHDTHVYLGMS Trigger: ACTCATACCTAGGTACACGTGTGTATCATGACACCATCCATATAAACGGTGTGTACAATGGAGCTGTCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
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| CDS TCA 72 bp | GCTCCATTGTACACACCGTTTATATGGATGGTGTCATaGTACACACGTGTACCTAGGTATGAGTTCGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: APLYTPFIWMVS*YTRVPRYEFVT Trigger: TGTAACGAACTCATACCTAGGTACACGTGTGTATCATGACACCATCCATATAAACGGTGTGTACAATGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079403.11 ENSMUST00000163094.9 ENSMUST00000164580.3 |
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