Pregenerated sensors for PGBD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050751Ensembl transcript IDs: ENSMUST00000052580.10, ENSMUST00000136892.3, ENSMUST00000140012.8, ENSMUST00000172566.8
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCAGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAGGACCTaGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GSGSMERCQPLVGRT*AYGRSHRVSPQPGP Trigger: AGGCCCTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR TCA 90 bp | TCCCACCGCAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTaGCAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SHRRRGCLWREWTQM*QGVESILLPATPRL Trigger: GAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTGCGGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR TCA 90 bp | TGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAAGGATaGGGAAGTGCCCCAAAGCCCCTGCCGAGGACAGTCTGCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: WRAFCCQPRLGSLKG*GSAPKPLPRTVCIW Trigger: CCAGATGCAGACTGTCCTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR TCA 90 bp | ACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTaGAAGGATGAGGAAGTGCCCCAAAGCCCCTGCCGAGGACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: TRCGEHSAASHASAH*KDEEVPQSPCRGQS Trigger: AGACTGTCCTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR GCA 90 bp | ATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAAGGATGAGGAAGTaGCCCAAAGCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTA | + |
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Preference number: 1 (lower is better) Translates to: ILLPATPRLTERMRK*PKAPAEDSLHLGTL Trigger: TAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR TCA 90 bp | TGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTaGGGCTCAGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: WKNPCIPSVGTVGPP*GSGSMERCQPLVGR Trigger: CCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR TCA 90 bp | GGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATaGTCTTTCACACTCTGGAAAGCGGAGCACGGTCCACTGGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GVHFVSLPGLNLSPS*SFTLWKAEHGPLVL Trigger: TAGGACCAGTGGACCGTGCTCCGCTTTCCAGAGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCTACATCTGTCCTGGAAGCCAGCGGCCCTTCCTAACCTGCCACAGGCCACTCCTTCCTTGTCCCTaGCACCCCTGGGCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ASYICPGSQRPFLTCHRPLLPCP*HPWASS Trigger: ACTGCTGGCCCAGGGGTGTCAGGGACAAGGAAGGAG...TGGCCTGTGGCAGGTTAGGAAGGGCCGCTGGCTTCCAGGACAGATGTAGCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCACTCCTTCCTTGTCCCTaGCACCCCTGGGCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LISWESARNPCPGCCGVALLPCP*HPWASS Trigger: ACTGCTGGCCCAGGGGTGTCAGGGACAAGGAAGGAG...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACTCCCCTCCTCGCCCTaGTCGCTGCAGTCCCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKLPSSP*SLQSRG Trigger: TCCACGGGACTGCAGCGAGCAGGGCGAGGAGGGGAG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGCTCCTTCCTTGTCCCTaGCACCCCTGGGCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGDVESRLLTTHEPSSQQLLPCP*HPWASS Trigger: ACTGCTGGCCCAGGGGTGTCAGGGACAAGGAAGGAG...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCTACATCTGTCCTGGAAGCCAGCGGCCCTTCCTAACCTGCCACAGGCCACTCGCTGCAGTCCCGTaGAGGACAGAACAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ASYICPGSQRPFLTCHRPLAAVP*RTEQEH Trigger: GTGCTCCTGTTCTGTCCTCCACGGGACTGCAGCGAG...TGGCCTGTGGCAGGTTAGGAAGGGCCGCTGGCTTCCAGGACAGATGTAGCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGTCAGAGAGTGGGGAGTaGGGGGCACATCTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQSESGE*GAHLFT Trigger: TGTGAACAGATGTGCCCCCCACTCCCCACTCTCTGA...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCTGGTGGGAAGGACCTaGGCCTATGGGAGATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGLVGRT*AYGRSH Trigger: GTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCCAGCCAGCAGGCAGGTaGCAGGCTCCTTCCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PREPSKLISWESARNPCPQPAGR*QAPSLS Trigger: GGACAAGGAAGGAGCCTGTCACCTGCCTGCTGGCTG...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCGGGAGCCATCTAAGCTaGTCTCATGGGAGAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QPLVGRTWAYGRSHRVSPGSHLS*SHGRVL Trigger: TAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCC...GGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGCACGCCTCGGCTCACTaGAAGGATGAGGAAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: QARVLVERVDTDVTRCGEHASAH*KDEEVP Trigger: GGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTG...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGACTCGCTGCAGTCCCGTaGAGGACAGAACAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: APAEDSLHLGTLGAIRSGLAAVP*RTEQEH Trigger: GTGCTCCTGTTCTGTCCTCCACGGGACTGCAGCGAG...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCTTGTATCCCATCTGTaGGGACAGTGGGCCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGLVSHL*GQWAHL Trigger: AAGGTGGGCCCACTGTCCCCACAGATGGGATACAAG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGCTCCTTCCTTGTCCCTaGCACCCCTGGGCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QGVEKSLYPICGDSGPTLLLPCP*HPWASS Trigger: ACTGCTGGCCCAGGGGTGTCAGGGACAAGGAAGGAG...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTGGAAAGCAGACTTCTaGCCACACATGAGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGWKADF*PHMSPP Trigger: TGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCA...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCTACATCTGTCCTGGAAGCCAGCGGCCCTTCCTAACCTGCCACAGGCCAGGGAGCCATCTAAGCTaGTCTCATGGGAGAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: ASYICPGSQRPFLTCHRPGSHLS*SHGRVL Trigger: TAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCC...TGGCCTGTGGCAGGTTAGGAAGGGCCGCTGGCTTCCAGGACAGATGTAGCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGGGCTCACTGAAAGGATaGGGAAGTGCCCCAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QARVLVERVDTDVTRCGEGSLKG*GSAPKP Trigger: GGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCC...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGGAAAGGATGAGGAAGTaGCCCAAAGCCCCTGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: QARVLVERVDTDVTRCGEERMRK*PKAPAE Trigger: CTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTC...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCACCTGTATCAGGCTCTaGGGAGCCACCCTTTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PREPSKLISWESARNPCPTCIRL*GATLCG Trigger: CCCACAAAGGGTGGCTCCCCAGAGCCTGATACAGGT...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGAACTTGAGCCCGTCATaGTCTTTCACACTCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQNLSPS*SFTLWK Trigger: TTTCCAGAGTGTGAAAGATCATGACGGGCTCAAGTT...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCCAACAGTGACAAGGTaGCAGAGTATTCAGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QPLVGRTWAYGRSHRVSPPTVTR*QSIQSA Trigger: TGCAGACTGAATACTCTGTCACCTTGTCACTGTTGG...GGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAAACAGAGTATTCAGTCTaGAGGCTCCCCAGGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKTEYSV*RLPRPW Trigger: CCAAGGCCTGGGGAGCCTGCAGACTGAATACTCTGT...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGACCTGTATCAGGCTCTaGGGAGCCACCCTTTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: APRGPFCKLAWSELEPVMTCIRL*GATLCG Trigger: CCCACAAAGGGTGGCTCCCCAGAGCCTGATACAGGT...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGATCAGAGAGTGGGGAGTaGGGGGCACATCTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: APAEDSLHLGTLGAIRSGSESGE*GAHLFT Trigger: TGTGAACAGATGTGCCCCCCACTCCCCACTCTCTGA...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR CAA 90 bp | GTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTaGAGGCTCAGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VEKSLYPICGDSGPT*RLRLHGEMSTSGGK Trigger: CTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR CAA 90 bp | GTGCCATTAGATCAGGAGGAAGGGCTGCAAGGTGTGGAAAAATCCTaGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VPLDQEEGLQGVEKS*YPICGDSGPTLRLR Trigger: CCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTGCAGCCCTTCCTCCTGATCTAATGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGGAAAGCAGACTTCTaGCCACACATGAGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EPSKLISWESARNPCPGCWKADF*PHMSPP Trigger: TGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCA...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGATGGAAAGCAGACTTCTaGCCACACATGAGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: APAEDSLHLGTLGAIRSGWKADF*PHMSPP Trigger: TGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCA...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAAGGGAGCCATCTAAGCTaGTCTCATGGGAGAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKGSHLS*SHGRVL Trigger: TAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCC...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACTCCTAATCCTGCTGTaGCTTTCTAGGGGACCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKLLILL*LSRGPH Trigger: ATGGGGTCCCCTAGAAAGTCACAGCAGGATTAGGAG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR GCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCATCAGGAGGAAGGGCTaGAAGGTGTGGAAAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGIRRKG*KVWKNP Trigger: AGGATTTTTCCACACCTTGCAGCCCTTCCTCCTGAT...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCATTTTGTAAGCTTGCCTaGTCTGAACTTGAGCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LISWESARNPCPGCCGVAFCKLA*SELEPV Trigger: GACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAA...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGACCAACAGTGACAAGGTaGCAGAGTATTCAGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: APAEDSLHLGTLGAIRSGPTVTR*QSIQSA Trigger: TGCAGACTGAATACTCTGTCACCTTGTCACTGTTGG...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTTTTGTAAGCTTGCCTaGTCTGAACTTGAGCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: EPSKLISWESARNPCPGCFCKLA*SELEPV Trigger: GACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAA...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGTCTAAGCTGATCTCATaGGAGAGTGCTAGGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: QARVLVERVDTDVTRCGESKLIS*ESARNP Trigger: TGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGA...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAACAGTGGGCCCACCTTaGGGCTCAGGCTCCATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSTVGPP*GSGSME Trigger: CTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGT...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTTGGAAAGCAGACTTCTaGCCACACATGAGCCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCWKADF*PHMSPP Trigger: TGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCA...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGTTAATGGCACCACACTaGATCTCTTCTTCCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RCGKILVSHLWGQWAHLELMAPH*ISSSKG Trigger: TCCCTTGGAAGAAGAGATGCAGTGTGGTGCCATTAA...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAAGATGTGACAAGGTGTaGAGAGCATTCTGCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSRCDKV*RAFCCQ Trigger: CTGGCAGCAGAATGCTCTCCACACCTTGTCACATCT...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR GCA 72 bp | AACCCGGCATTGTTCTCCCCTCCTCGCCCTGCTCGCTaGAGTCCCGTGGAGGACAGAACAGGAGCACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NPALFSPPRPAR*SPVEDRTGAPC Trigger: ACAGGGTGCTCCTGTTCTGTCCTCCACGGGACTGCAGCGAGCAGGGCGAGGAGGGGAGAACAATGCCGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | TTCTGCTGCCAGCCACGCCTCGGCTCACTGAAAGGATaGGGAAGTGCCCCAAAGCCCCTGCCGAGGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FCCQPRLGSLKG*GSAPKPLPRTV Trigger: GACTGTCCTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | GGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTaGAAGGATGAGGAAGTGCCCCAAAGCCCCTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GEHSAASHASAH*KDEEVPQSPCR Trigger: TCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR GCA 72 bp | CCAGCCACGCCTCGGCTCACTGAAAGGATGAGGAAGTaGCCCAAAGCCCCTGCCGAGGACAGTCTGCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PATPRLTERMRK*PKAPAEDSLHL Trigger: CAGATGCAGACTGTCCTCGGCAGGGGCTTTGGGGCACTTCCTCATCCTTTCAGTGAGCCGAGGCGTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | TGGGGACAGTGGGCCCACCTTGAGGCTCAGGCTCCATaGAGAGATGTCAACCTCTGGTGGGAAGGACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WGQWAHLEAQAP*RDVNLWWEGPG Trigger: CCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCAGGCTCCCCAGGCCTaGGTAGCCATAGCTAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGQAPQA*VAIASY Trigger: GTAGCTAGCTATGGCTACCAAGGCCTGGGGAGCCTG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR GCA 72 bp | TCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATaGCCCGGATGCTGTGGGGTGGCACCGAGGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKLISWESARNP*PGCCGVAPRGP Trigger: TGGACCCCTCGGTGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | GAGGCTCAGGCTCCATGGAGAGATGTCAACCTCTGGTaGGAAGGACCTGGGCCTATGGGAGATCCCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EAQAPWRDVNLW*EGPGPMGDPTG Trigger: CCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | TCCATGGAGAGATGTCAACCTCTGGTGGGAAGGACCTaGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SMERCQPLVGRT*AYGRSHRVSPQ Trigger: CTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGCAGGCTCCCCAGGCCTaGGTAGCCATAGCTAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QARVLVERVDTDVTRCGEQAPQA*VAIASY Trigger: GTAGCTAGCTATGGCTACCAAGGCCTGGGGAGCCTG...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | CCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTaGGGCTCAGGCTCCATGGAGAGATGTCAACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCIPSVGTVGPP*GSGSMERCQPL Trigger: CAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | AGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTaGCAAGGTGTGGAGAGCATTCTGCTGCCAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: RRGCLWREWTQM*QGVESILLPAT Trigger: CGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | CTTGAGGCTCAGGCTCCATGGAGAGATGTCAACCTCTaGTGGGAAGGACCTGGGCCTATGGGAGATCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LEAQAPWRDVNL*WEGPGPMGDPT Trigger: TGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGAACAAAAACCCGGCATaGTTCTCCCCTCCTCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QARVLVERVDTDVTRCGENKNPA*FSPPRP Trigger: AGGGCGAGGAGGGGAGAACAATGCCGGGTTTTTGTT...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGCAGGCTCCCCAGGCCTaGGTAGCCATAGCTAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QGVEKSLYPICGDSGPTLQAPQA*VAIASY Trigger: GTAGCTAGCTATGGCTACCAAGGCCTGGGGAGCCTG...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | GCTGCAAGGTGTGGAAAAATCCTTGTATCCCATCTGTaGGGACAGTGGGCCCACCTTGAGGCTCAGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AARCGKILVSHL*GQWAHLEAQAP Trigger: TGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGAACAAAAACCCGGCATaGTTCTCCCCTCCTCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RCGKILVSHLWGQWAHLENKNPA*FSPPRP Trigger: AGGGCGAGGAGGGGAGAACAATGCCGGGTTTTTGTT...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | ACACTGCATCTCTTCTTCCAAGGGAGCCATCTAAGCTaGTCTCATGGGAGAGTGCTAGGAACCCATGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: TLHLFFQGSHLS*SHGRVLGTHAP Trigger: CGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGGAAGAAGAGATGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | TCTCTTCTTCCAAGGGAGCCATCTAAGCTGATCTCATaGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLPREPSKLIS*ESARNPCPGCC Trigger: ACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGGAAGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | TGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTaGGCCCACCTTGAGGCTCAGGCTCCATGGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CGKILVSHLWGQ*AHLEAQAPWRD Trigger: ATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | TTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATaGTCTTTCACACTCTGGAAAGCGGAGCACGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FVSLPGLNLSPS*SFTLWKAEHGP Trigger: TGGACCGTGCTCCGCTTTCCAGAGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CCA 72 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTaGAAACACCTGAACTCAGGAAGAGTGGGCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KKSLAFIRLPKR*KHLNSGRVGLV Trigger: TACAAGGCCCACTCTTCCTGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR TCA 72 bp | ATTAAGGGTACAGCAAAGGTTATCTTAAACACAAACTaGAGTTGGGCCTGTGATCTGTGGCATTGCGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: IKGTAKVILNTN*SWACDLWHCGS Trigger: GGACCCGCAATGCCACAGATCACAGGCCCAACTTCAGTTTGTGTTTAAGATAACCTTTGCTGTACCCTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCTGGCCCCGGGCGAGTaGGGTGGCAGGGTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVGRTWAYGRSHRVSPLAPGE*GGRVGQ Trigger: TTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAG...GGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCAGCGGGCCTGGCTCATaGCGAGGGCAAGGCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLSGPGS*RGQGSG Trigger: ACCGGAGCCTTGCCCTCGTCATGAGCCAGGCCCGCT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGCCCAGGCACCGTCACTaGCAAACCGCTCCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQPRHRH*QTAPGT Trigger: AGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGG...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGTAGCGTGCACGGGCTaGCTCCAGCAGCGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGVACTG*LQQRRS Trigger: GCTCCGGCGCTGCTGGAGGCAGCCCGTGCACGCTAC...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGAGCCCATGCGTGGTCTaGCTGGATCGGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQSPCVV*LDRKAT Trigger: TGTGGCCTTCCGATCCAGCCAGACCACGCATGGGCT...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCCCCGGGCGAGTGGGGTaGCAGGGTTGGTCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLPGRVG*QGWSTW Trigger: CCATGTTGACCAACCCTGCCACCCCACTCGCCCGGG...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGCTGGCCCCGGGCGAGTaGGGTGGCAGGGTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQLAPGE*GGRVGQ Trigger: TTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAG...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTCTGGCCCCGGGCGAGTaGGGTGGCAGGGTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGLAPGE*GGRVGQ Trigger: TTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAG...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQVPPCS*ARCPGR Trigger: TCGTCCCGGACAACGTGCTCAAGAACATGGTGGTAC...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCCCAGGCACCGTCACTaGCAAACCGCTCCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGPRHRH*QTAPGT Trigger: AGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGGTCAGGAAGCGGAAGTaGCCCTTGTTGTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQVRKRK*PLLYQQ Trigger: CTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGAC...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCAGCCCATGCGTGGTCTaGCTGGATCGGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLSPCVV*LDRKAT Trigger: TGTGGCCTTCCGATCCAGCCAGACCACGCATGGGCT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACCCGGGCGAGTGGGGTaGCAGGGTTGGTCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKPGRVG*QGWSTW Trigger: CCATGTTGACCAACCCTGCCACCCCACTCGCCCGGG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCCCCGGGCGAGTGGGGTaGCAGGGTTGGTCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPPGRVG*QGWSTW Trigger: CCATGTTGACCAACCCTGCCACCCCACTCGCCCGGG...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTACATCTGTCCTGGAAGCCAGCGGCCCTTCCTAACCTGCCACAGGCCACAGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASYICPGSQRPFLTCHRPQGSRR*SGSGSA Trigger: GGCACTTCCGCTTCCTGACCAACGCCTACTCCCCTG...TGGCCTGTGGCAGGTTAGGAAGGGCCGCTGGCTTCCAGGACAGATGTAGCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCCGTGCACGTGGCAATaGACACAGGGTCCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGPCTWQ*TQGPRQ Trigger: TTGACGAGGACCCTGTGTTCATTGCCACGTGCACGG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | CAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCGAAGGCCTTCATCTCTaGCAACGTCACCTCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVGRTWAYGRSHRVSPEGLHL*QRHLHP Trigger: TGGGTGGAGGTGACGTTGGCAGAGATGAAGGCCTTC...GGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGCTACATCTGTCCTGGAAGCCAGCGGCCCTTCCTAACCTGCCACAGGCCAGGCGGACCCACAGGCTaGATTTCCGCTTTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASYICPGSQRPFLTCHRPGGPTG*ISAFSS Trigger: AGAGGAAAAAGCGGAAATTCAGCCTGTGGGTCCGCC...TGGCCTGTGGCAGGTTAGGAAGGGCCGCTGGCTTCCAGGACAGATGTAGCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR TCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCATCTGCAGATGTAGCTaGGGTGAGCCGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLICRCS*GEPQRP Trigger: AGGCCTTTGCGGCTCACCTCAGCTACATCTGCAGAT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCAGCCCAGCAACTCCCTaGCAAGTCTCTCTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGSPATP*QVSLRT Trigger: AGTTCGGAGAGAGACTTGTCAGGGAGTTGCTGGGCT...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCAGTACCGACTCACAGTaGGAGACGCTGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGSTDSQ*ETLVEI Trigger: GATCTCCACCAGCGTCTCGCACTGTGAGTCGGTACT...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGGCAAGGCTCCGGTTaGTATAGAAGCCTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPGQGSG*YRSLRS Trigger: GGAGCGGAGGCTTCTATAGCAACCGGAGCCTTGCCC...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAGTCAGGAAGCGGAAGTaGCCCTTGTTGTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISWESARNPCPGCCGVAVRKRK*PLLYQQ Trigger: CTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGAC...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGTCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLHGEMSTSGGKDLGLWESGTKS*KKSTAL Trigger: TAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGA...CTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAAGTGCGAGACGCTGGTaGAGATCACATAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LISWESARNPCPGCCGVASARRW*RSHSPG Trigger: TCCTGGGCTATGTGATCTCCACCAGCGTCTCGCACT...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCAGTGCGAGACGCTGGTaGAGATCACATAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLSARRW*RSHSPG Trigger: TCCTGGGCTATGTGATCTCCACCAGCGTCTCGCACT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTTTCTCGAAGCGGGCCTaGCTCATGACGAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGFSKRA*LMTRAR Trigger: CCTTGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAATTCTCGAAGCGGGCCTaGCTCATGACGAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKFSKRA*LMTRAR Trigger: CCTTGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGATTCTCGAAGCGGGCCTaGCTCATGACGAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APAEDSLHLGTLGAIRSGFSKRA*LMTRAR Trigger: CCTTGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCCATGCGTGGTCTGGCTaGATCGGAAGGCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLHAWSG*IGRPQH Trigger: ATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATG...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCAGCCCATGCGTGGTCTaGCTGGATCGGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCSPCVV*LDRKAT Trigger: TGTGGCCTTCCGATCCAGCCAGACCACGCATGGGCT...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCCAGGGTTGGTCAACATaGATGGAGGGAGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLQGWST*MEGDLC Trigger: GCACAGGTCTCCCTCCATCCATGTTGACCAACCCTG...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGCCCGGGCGAGTGGGGTaGCAGGGTTGGTCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLEPGRVG*QGWSTW Trigger: CCATGTTGACCAACCCTGCCACCCCACTCGCCCGGG...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTCAGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGQGSRR*SGSGSA Trigger: GGCACTTCCGCTTCCTGACCAACGCCTACTCCCCTG...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACGCGCTAGCGCTGGGTaGCATCTTTCTGGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKRASAG*HLSGWT Trigger: GGTCCAACCAGAAAGATGCCACCCAGCGCTAGCGCG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: RLHGEMSTSGGKDLGLWEVPPCS*ARCPGR Trigger: TCGTCCCGGACAACGTGCTCAAGAACATGGTGGTAC...CTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR TCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCCCGTGCACGTGGCAATaGACACAGGGTCCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPPCTWQ*TQGPRQ Trigger: TTGACGAGGACCCTGTGTTCATTGCCACGTGCACGG...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR TCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCCCGTGCACGTGGCAATaGACACAGGGTCCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCPCTWQ*TQGPRQ Trigger: TTGACGAGGACCCTGTGTTCATTGCCACGTGCACGG...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGCCCAGGCACCGTCACTaGCAAACCGCTCCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMPRHRH*QTAPGT Trigger: AGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGG...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGAGTACCGACTCACAGTaGGAGACGCTGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQSTDSQ*ETLVEI Trigger: GATCTCCACCAGCGTCTCGCACTGTGAGTCGGTACT...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAGCGAACCAGAACACTTaGTGCCACGTCTTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LISWESARNPCPGCCGVAANQNT*CHVLFG Trigger: GCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGC...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAATCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKSGTKS*KKSTAL Trigger: TAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGA...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCTCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPSGTKS*KKSTAL Trigger: TAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGA...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCTGCCAAACCGCTCCTaGAACTTCCTGGCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGLPNRS*NFLAYM Trigger: CATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCCTGCCAAACCGCTCCTaGAACTTCCTGGCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLLPNRS*NFLAYM Trigger: CATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAG...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGAGTGCGAGACGCTGGTaGAGATCACATAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQSARRW*RSHSPG Trigger: TCCTGGGCTATGTGATCTCCACCAGCGTCTCGCACT...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGTTCTCGAAGCGGGCCTaGCTCATGACGAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMFSKRA*LMTRAR Trigger: CCTTGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAATGTAGAGCCCATGCGTaGTCTGGCTGGATCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKCRAHA*SGWIGR Trigger: CCTTCCGATCCAGCCAGACCACGCATGGGCTCTACA...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGAGGCGGACCCACAGGCTaGATTTCCGCTTTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: APAEDSLHLGTLGAIRSGGGPTG*ISAFSS Trigger: AGAGGAAAAAGCGGAAATTCAGCCTGTGGGTCCGCC...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGGCGGACCCACAGGCTaGATTTCCGCTTTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGGGPTG*ISAFSS Trigger: AGAGGAAAAAGCGGAAATTCAGCCTGTGGGTCCGCC...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCATCTGCAGATGTAGCTaGGGTGAGCCGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPICRCS*GEPQRP Trigger: AGGCCTTTGCGGCTCACCTCAGCTACATCTGCAGAT...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCAGCCCAGCAACTCCCTaGCAAGTCTCTCTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCSPATP*QVSLRT Trigger: AGTTCGGAGAGAGACTTGTCAGGGAGTTGCTGGGCT...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCGAAGGCCTTCATCTCTaGCAACGTCACCTCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCEGLHL*QRHLHP Trigger: TGGGTGGAGGTGACGTTGGCAGAGATGAAGGCCTTC...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGGGGCAAGGCTCCGGTTaGTATAGAAGCCTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGVEKSLYPICGDSGPTLGQGSG*YRSLRS Trigger: GGAGCGGAGGCTTCTATAGCAACCGGAGCCTTGCCC...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGTCAGGAAGCGGAAGTaGCCCTTGTTGTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGVRKRK*PLLYQQ Trigger: CTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGAC...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGGTGAGGCTGCGGAGGTaGTGTAAAAGGGGTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLEVRLRR*CKRGSR Trigger: GCGGGAACCCCTTTTACAGCACCTCCGCAGCCTCAC...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCCAGGGTTGGTCAACATaGATGGAGGGAGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCQGWST*MEGDLC Trigger: GCACAGGTCTCCCTCCATCCATGTTGACCAACCCTG...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACAGGGTTGGTCAACATaGATGGAGGGAGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKQGWST*MEGDLC Trigger: GCACAGGTCTCCCTCCATCCATGTTGACCAACCCTG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGCAGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLEQGSRR*SGSGSA Trigger: GGCACTTCCGCTTCCTGACCAACGCCTACTCCCCTG...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| 3UTR CAA 72 bp | TCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTaGAGGCTCAGGCTCCATGGAGAGATGTCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYPICGDSGPT*RLRLHGEMSTS Trigger: AGAGGTTGACATCTCTCCATGGAGCCTGAGCCTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMVPPCS*ARCPGR Trigger: TCGTCCCGGACAACGTGCTCAAGAACATGGTGGTAC...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCCAACATGGAAGTACTTaGGGATTTTCTCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGQHGST*GFSRSG Trigger: CCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTG...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGAGTACCGACTCACAGTaGGAGACGCTGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMSTDSQ*ETLVEI Trigger: GATCTCCACCAGCGTCTCGCACTGTGAGTCGGTACT...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGGTCAGGAAGCGGAAGTaGCCCTTGTTGTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMVRKRK*PLLYQQ Trigger: CTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGAC...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCAACCAGAACACTTGCTaGCACGTCTTGTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLNQNTC*HVLFGL Trigger: CAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCGCGAACCAGAACACTTaGTGCCACGTCTTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSKLISWESARNPCPGCANQNT*CHVLFG Trigger: GCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGC...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGCGAACCAGAACACTTaGTGCCACGTCTTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPANQNT*CHVLFG Trigger: GCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGC...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGTCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGVEKSLYPICGDSGPTLSGTKS*KKSTAL Trigger: TAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGA...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAGCTCCTGGAACTTCCTaGCATACATGTTGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LISWESARNPCPGCCGVAAPGTS*HTCWSV Trigger: TACAGACCAACATGTATGCCAGGAAGTTCCAGGAGC...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTCTGCCAAACCGCTCCTaGAACTTCCTGGCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGLPNRS*NFLAYM Trigger: CATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAG...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGTGTAGAGCCCATGCGTaGTCTGGCTGGATCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLECRAHA*SGWIGR Trigger: CCTTCCGATCCAGCCAGACCACGCATGGGCTCTACA...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTCATGCTGTGCAGCTGTaGCTTGTTCTTCAGAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGHAVQL*LVLQSV Trigger: GACGCTCTGAAGAACAAGCCACAGCTGCACAGCATG...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCCTGGTTGGACCTGATTaGTACTGTAGCCACGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PREPSKLISWESARNPCPLVGPD*YCSHGI Trigger: GATCCCGTGGCTACAGTACCAATCAGGTCCAACCAG...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172566.8 |
||
| 3UTR CAA 72 bp | GGTGACAGAGTATTCAGTCTGCAGGCTCCCCAGGCCTaGGTAGCCATAGCTAGCTACATCTGTCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDRVFSLQAPQA*VAIASYICPGS Trigger: GCTTCCAGGACAGATGTAGCTAGCTATGGCTACCAAGGCCTGGGGAGCCTGCAGACTGAATACTCTGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR TCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGCAACATGGAAGTACTTaGGGATTTTCTCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQQHGST*GFSRSG Trigger: CCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTG...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQHVVGV*HFVQDV Trigger: TACATCCTGTACAAAATGTCAGACGCCTACCACGTG...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCTCCTGGAACTTCCTaGCATACATGTTGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGDVESRLLTTHEPSSQQAPGTS*HTCWSV Trigger: TACAGACCAACATGTATGCCAGGAAGTTCCAGGAGC...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTAGCCCATGCGTGGTCTaGCTGGATCGGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCSPCVV*LDRKAT Trigger: TGTGGCCTTCCGATCCAGCCAGACCACGCATGGGCT...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGCATGCTGTGCAGCTGTaGCTTGTTCTTCAGAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: APRGPFCKLAWSELEPVMHAVQL*LVLQSV Trigger: GACGCTCTGAAGAACAAGCCACAGCTGCACAGCATG...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR TCA 90 bp | TGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCTCACTGAAACACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CDKVWRAFCCQPRLGSLKHVVGV*HFVQDV Trigger: TACATCCTGTACAAAATGTCAGACGCCTACCACGTG...TTTCAGTGAGCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGGCGAACCAGAACACTTaGTGCCACGTCTTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGVEKSLYPICGDSGPTLANQNT*CHVLFG Trigger: GCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGC...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCACAGGCTCTCGTAGCGTaGACGGGCTGCCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSQALVA*TGCLQQ Trigger: CTGCTGGAGGCAGCCCGTGCACGCTACGAGAGCCTG...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGCTCCTGGAACTTCCTaGCATACATGTTGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DVESRLLTTHEPSSQQAGAPGTS*HTCWSV Trigger: TACAGACCAACATGTATGCCAGGAAGTTCCAGGAGC...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTTGTAGAGCCCATGCGTaGTCTGGCTGGATCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCCRAHA*SGWIGR Trigger: CCTTCCGATCCAGCCAGACCACGCATGGGCTCTACA...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTAGTACCGACTCACAGTaGGAGACGCTGGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCSTDSQ*ETLVEI Trigger: GATCTCCACCAGCGTCTCGCACTGTGAGTCGGTACT...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR GCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTGGGCAAGGCTCCGGTTaGTATAGAAGCCTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTGQGSG*YRSLRS Trigger: GGAGCGGAGGCTTCTATAGCAACCGGAGCCTTGCCC...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTCATGCGTGGTCTGGCTaGATCGGAAGGCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCHAWSG*IGRPQH Trigger: ATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATG...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTCAGGGTTGGTCAACATaGATGGAGGGAGACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCQGWST*MEGDLC Trigger: GCACAGGTCTCCCTCCATCCATGTTGACCAACCCTG...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCACTGGCCCCGGGCGAGTaGGGTGGCAGGGTTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSLAPGE*GGRVGQ Trigger: TTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAG...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGCAACATGGAAGTACTTaGGGATTTTCTCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGVEKSLYPICGDSGPTLQHGST*GFSRSG Trigger: CCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTG...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGAACCAGAACACTTGCTaGCACGTCTTGTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLENQNTC*HVLFGL Trigger: CAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTT...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTTGTAGAGCCCATGCGTaGTCTGGCTGGATCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTCRAHA*SGWIGR Trigger: CCTTCCGATCCAGCCAGACCACGCATGGGCTCTACA...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTGGCGGACCCACAGGCTaGATTTCCGCTTTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTGGPTG*ISAFSS Trigger: AGAGGAAAAAGCGGAAATTCAGCCTGTGGGTCCGCC...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTAGCCCAGCAACTCCCTaGCAAGTCTCTCTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTSPATP*QVSLRT Trigger: AGTTCGGAGAGAGACTTGTCAGGGAGTTGCTGGGCT...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGTCCTGGCATACATGTTaGTCTGTACCACCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCGKILVSHLWGQWAHLESWHTC*SVPPCS Trigger: AGAACATGGTGGTACAGACCAACATGTATGCCAGGA...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTCATGCGTGGTCTGGCTaGATCGGAAGGCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTHAWSG*IGRPQH Trigger: ATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATG...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAAGCCCAGCAACTCCCTaGCAAGTCTCTCTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSSPATP*QVSLRT Trigger: AGTTCGGAGAGAGACTTGTCAGGGAGTTGCTGGGCT...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTAACCAGAACACTTGCTaGCACGTCTTGTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCNQNTC*HVLFGL Trigger: CAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTT...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCACAGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSQGSRR*SGSGSA Trigger: GGCACTTCCGCTTCCTGACCAACGCCTACTCCCCTG...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCACGCGCTAGCGCTGGGTaGCATCTTTCTGGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSRASAG*HLSGWT Trigger: GGTCCAACCAGAAAGATGCCACCCAGCGCTAGCGCG...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCACTGCCAAACCGCTCCTaGAACTTCCTGGCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSLPNRS*NFLAYM Trigger: CATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAG...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCAGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSVPPCS*ARCPGR Trigger: TCGTCCCGGACAACGTGCTCAAGAACATGGTGGTAC...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTCAACATGGAAGTACTTaGGGATTTTCTCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTQHGST*GFSRSG Trigger: CCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTG...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCAATCTGCAGATGTAGCTaGGGTGAGCCGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSICRCS*GEPQRP Trigger: AGGCCTTTGCGGCTCACCTCAGCTACATCTGCAGAT...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTHVVGV*HFVQDV Trigger: TACATCCTGTACAAAATGTCAGACGCCTACCACGTG...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTAACCAGAACACTTGCTaGCACGTCTTGTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFCKLAWSELEPVMIFHTNQNTC*HVLFGL Trigger: CAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTT...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCACATGCGTGGTCTGGCTaGATCGGAAGGCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSHAWSG*IGRPQH Trigger: ATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATG...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAGCTCCTGGAACTTCCTaGCATACATGTTGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSAPGTS*HTCWSV Trigger: TACAGACCAACATGTATGCCAGGAAGTTCCAGGAGC...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCACATGCTGTGCAGCTGTaGCTTGTTCTTCAGAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSHAVQL*LVLQSV Trigger: GACGCTCTGAAGAACAAGCCACAGCTGCACAGCATG...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CCA 90 bp | GGCCGCGTTCCGGCACAGGCTCCGGGCCACCATGCTGTGCAGCTGTaGCTTGTTCTTCAGAGCGTCCAGGCCATCTGGGCCACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRVPAQAPGHHAVQL*LVLQSVQAIWATTF Trigger: GAAGGTGGTGGCCCAGATGGCCTGGACGCTCTGAAGAACAAGCCACAGCTGCACAGCATGGTGGCCCGGAGCCTGTGCCGGAACGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CCA 90 bp | GTGCTGGCCCCGGGCGAGTGGGGTGGCAGGGTTGGTCAACATGGATaGAGGGAGACCTGTGCAGTCACTCTTCCTAGAGCTGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLAPGEWGGRVGQHG*RETCAVTLPRAEEA Trigger: GGCCTCCTCAGCTCTAGGAAGAGTGACTGCACAGGTCTCCCTCCATCCATGTTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CCA 90 bp | GTCCGGGACGAAGAGCTGGAAGAAGTCCACCGCGCTAGCGCTGGGTaGCATCTTTCTGGTTGGACCACCGGTGTCCTCGAAGCGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRDEELEEVHRASAG*HLSGWTTGVLEARG Trigger: TCCCCGCGCTTCGAGGACACCGGTGGTCCAACCAGAAAGATGCCACCCAGCGCTAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAGATGTGACAAGGTGTGGAGAGCATTCTGCTGCCAGCCACGCCTCGGCAGTGGGGTGGCAGGGTaGGTCAACATGGATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHRCDKVWRAFCCQPRLGSGVAG*VNMDGG Trigger: CCCTCCATCCATGTTGACCAACCCTGCCACCCCACT...GCCGAGGCGTGGCTGGCAGCAGAATGCTCTCCACACCTTGTCACATCTGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLVGRTWAYGRSHRVSPMFLST*SGTKSW Trigger: CCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACAT...GGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | GGGGGTGATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGAGTGGGGTGGCAGGGTaGGTCAACATGGATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGDVESRLLTTHEPSSQQSGVAG*VNMDGG Trigger: CCCTCCATCCATGTTGACCAACCCTGCCACCCCACT...CTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 90 bp | GTTGGTCAGGAAGCGGAAGTGCCCCTTGTTGTACCAGCAGATCAGTaGCATGTTGCCCTTTGTCCTGATCTGGTGCTGGCCCCGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGQEAEVPLVVPADQ*HVALCPDLVLAPGE Trigger: CTCGCCCGGGGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGACCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 90 bp | TACCAGCAGATCAGTGACATGTTGCCCTTTGTCCTGATCTGGTGCTaGCCCCGGGCGAGTGGGGTGGCAGGGTTGGTCAACATGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: YQQISDMLPFVLIWC*PRASGVAGLVNMDG Trigger: TCCATCCATGTTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGATCTGCTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLMFLST*SGTKSW Trigger: CCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACAT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCCGGAAGTGCCCCTTGTaGTACCAGCAGATCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLRKCPL*YQQISD Trigger: GTCACTGATCTGCTGGTACAACAAGGGGCACTTCCG...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 90 bp | CGAGGGCAAGGCTCCGGTTGCTATAGAAGCCTCCGCTCCAAATGCTaGGTACCGACTCACAGTGCGAGACGCTGGTGGAGATCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGQGSGCYRSLRSKC*VPTHSARRWWRSHS Trigger: GCTATGTGATCTCCACCAGCGTCTCGCACTGTGAGTCGGTACTCAGCATTTGGAGCGGAGGCTTCTATAGCAACCGGAGCCTTGCCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 90 bp | TCCGCTTTTTCCTCTTCCGCAGCTCTCGCTCCGTGCACGTGGCAATaGACACAGGGTCCTCGTCAATCAGGGGTTCATGTAGCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFSSSAALAPCTWQ*TQGPRQSGVHVAPG Trigger: CCCAGGTGCTACATGAACCCCTGATTGACGAGGACCCTGTGTTCATTGCCACGTGCACGGAGCGAGAGCTGCGGAAGAGGAAAAAGCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGGAAGGACCTGGGCCTATGGGAGATCCCACAGGGTCAGTCCCCAGCCAGTTCCTGGCATACATGTaGGTCTGTACCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WWEGPGPMGDPTGSVPSQFLAYM*VCTTMF Trigger: GAACATGGTGGTACAGACCAACATGTATGCCAGGAA...CTGGCTGGGGACTGACCCTGTGGGATCTCCCATAGGCCCAGGTCCTTCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | AGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTGACAGGCTCAAGCGGAAGTGCCCCTaGTTGTACCAGCAGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLLTTHEPSSQQAGDRLKRKCP*LYQQIS Trigger: ACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTT...GAGCCTGTCACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | AGGCTCCATGGAGAGATGTCAACCTCTGGTGGGAAGGACCTGGGCCTATGGGAGGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLHGEMSTSGGKDLGLWEGEPEH*LPRLVW Trigger: CCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCC...CTCCCATAGGCCCAGGTCCTTCCCACCAGAGGTTGACATCTCTCCATGGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS GCA 90 bp | AGGCCTTCATCTCTGCCAACGTCACCTCCACCCAGGCACCGTCACTaGCAAACCGCTCCTGGAACTTCCTGGCATACATGTTGGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RPSSLPTSPPPRHRH*QTAPGTSWHTCWSV Trigger: TACAGACCAACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGGTGGAGGTGACGTTGGCAGAGATGAAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 90 bp | GCCAACGTCACCTCCACCCAGGCACCGTCACTGCCAAACCGCTCCTaGAACTTCCTGGCATACATGTTGGTCTGTACCACCATGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANVTSTQAPSLPNRS*NFLAYMLVCTTMFL Trigger: CAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGGTGGAGGTGACGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 90 bp | GTCTGTACCACCATGTTCTTGAGCACGTTGTCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTAGCGCTGGGTGGCATCTTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VCTTMFLSTLSGTKS*KKSTALALGGIFLV Trigger: AACCAGAAAGATGCCACCCAGCGCTAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAAATTCTTCGAACAGATaGAGGCTGGTGATGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LISWESARNPCPGCCGVANSSNR*RLVMLG Trigger: GCCCAGCATCACCAGCCTCAATCTGTTCGAAGAATT...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCCGGAAGTGCCCCTTGTaGTACCAGCAGATCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PREPSKLISWESARNPCPRKCPL*YQQISD Trigger: GTCACTGATCTGCTGGTACAACAAGGGGCACTTCCG...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EPSKLISWESARNPCPGCGEPEH*LPRLVW Trigger: CCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCC...GCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGGGAGCCATCTAAGCTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PREPSKLISWESARNPCPGEPEH*LPRLVW Trigger: CCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCC...GGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAGCTTAGATGGCTCCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS TCA 90 bp | CCTGGAACTTCCTGGCATACATGTTGGTCTGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGAAGAGCTGGAAGAAGTCCACCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTSWHTCWSVPPCS*ARCPGRRAGRSPPR Trigger: GCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: APRGPFCKLAWSELEPVMMFLST*SGTKSW Trigger: CCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACAT...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCATTCCTGGCATACATGTaGGTCTGTACCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LISWESARNPCPGCCGVAFLAYM*VCTTMF Trigger: GAACATGGTGGTACAGACCAACATGTATGCCAGGAA...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGTGTACCACCATGTTCTaGAGCACGTTGTCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: RCGKILVSHLWGQWAHLECTTMF*STLSGT Trigger: CGTCCCGGACAACGTGCTCAAGAACATGGTGGTACA...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CTGATCTCATGGGAGAGTGCTAGGAACCCATGCCCCGGATGCTGTGGGGTGGCAACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LISWESARNPCPGCCGVATTWKY*RIFSKR Trigger: CCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGT...TGCCACCCCACAGCATCCGGGGCATGGGTTCCTAGCACTCTCCCATGAGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTAATTCTTCGAACAGATaGAGGCTGGTGATGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DVESRLLTTHEPSSQQAGNSSNR*RLVMLG Trigger: GCCCAGCATCACCAGCCTCAATCTGTTCGAAGAATT...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGCCGAGGACAGTCTGCATCTGGGGACATTAGGTGCCATTAGATCAGGAAATTCTTCGAACAGATaGAGGCTGGTGATGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: APAEDSLHLGTLGAIRSGNSSNR*RLVMLG Trigger: GCCCAGCATCACCAGCCTCAATCTGTTCGAAGAATT...TCCTGATCTAATGGCACCTAATGTCCCCAGATGCAGACTGTCCTCGGCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGCGGAAGTGCCCCTTGTaGTACCAGCAGATCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGVEKSLYPICGDSGPTLRKCPL*YQQISD Trigger: GTCACTGATCTGCTGGTACAACAAGGGGCACTTCCG...CAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | GCACCGAGGGGTCCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGAAGCGGAAGTGCCCCTaGTTGTACCAGCAGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: APRGPFCKLAWSELEPVMKRKCP*LYQQIS Trigger: ACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTT...CATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 90 bp | CTCTCCGAACTGTGCCCGGCTGTACTTCTTCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTAGGCGTTGTTGACGGCGATGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSELCPAVLLHVVGV*HFVQDVGVVDGDAD Trigger: ATCAGCATCGCCGTCAACAACGCCTACATCCTGTACAAAATGTCAGACGCCTACCACGTGAAGAAGTACAGCCGGGCACAGTTCGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCGAGGGTGCTTGTGGAGAGAGTGGACACAGATGTGACAAGGTGTGGAGAGTTCCTGGCATACATGTaGGTCTGTACCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QARVLVERVDTDVTRCGEFLAYM*VCTTMF Trigger: GAACATGGTGGTACAGACCAACATGTATGCCAGGAA...CTCTCCACACCTTGTCACATCTGTGTCCACTCTCTCCACAAGCACCCTCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGGAAAAATCCTTGTATCCCATCTGTGGGGACAGTGGGCCCACCTTGAGAAGCGGAAGTGCCCCTaGTTGTACCAGCAGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCGKILVSHLWGQWAHLEKRKCP*LYQQIS Trigger: ACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTT...CTCAAGGTGGGCCCACTGTCCCCACAGATGGGATACAAGGATTTTTCCACACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCMFLST*SGTKSW Trigger: CCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACAT...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGGAAAGCAGACTTCTGACCACACATGAGCCCTCCAGCCAGCAGGCAGGTACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DVESRLLTTHEPSSQQAGTTWKY*RIFSKR Trigger: CCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGT...ACCTGCCTGCTGGCTGGAGGGCTCATGTGTGGTCAGAAGTCTGCTTTCCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTAGTGGGGTGGCAGGGTaGGTCAACATGGATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFCKLAWSELEPVMIFHTSGVAG*VNMDGG Trigger: CCCTCCATCCATGTTGACCAACCCTGCCACCCCACT...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCAAGTGGGGTGGCAGGGTaGGTCAACATGGATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSSGVAG*VNMDGG Trigger: CCCTCCATCCATGTTGACCAACCCTGCCACCCCACT...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | CCATTTTGTAAGCTTGCCTGGTCTGAACTTGAGCCCGTCATGATCTTTCACACTAAGCGGAAGTGCCCCTaGTTGTACCAGCAGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFCKLAWSELEPVMIFHTKRKCP*LYQQIS Trigger: ACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTT...AGTGTGAAAGATCATGACGGGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSGEPEH*LPRLVW Trigger: CCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCC...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCAGAAACAGAACTGTGATCATGCAGGGAGCTGTGAAGGTATGTGGTGTGTGGCATCTTTCTGGTaGGACCTGATTGGTACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGQKQNCDHAGSCEGMWCVASFW*DLIGTV Trigger: TACAGTACCAATCAGGTCCAACCAGAAAGATGCCAC...ACACCACATACCTTCACAGCTCCCTGCATGATCACAGTTCTGTTTCTGGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTCATTGGCCTTCATTAGGCTCCCTAAGCGTTGGAAACACCTGAACTCAACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KKSLAFIRLPKRWKHLNSTTWKY*RIFSKR Trigger: CCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGT...TGAGTTCAGGTGTTTCCAACGCTTAGGGAGCCTAATGAAGGCCAATGACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS-3UTR CAA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCATTCCTGGCATACATGTaGGTCTGTACCACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSFLAYM*VCTTMF Trigger: GAACATGGTGGTACAGACCAACATGTATGCCAGGAA...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGACAGAGGGAGGTGAAGGATTTTGTTTTCATGATGCTATAGAGTTCTCAACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQTEGGEGFCFHDAIEFSTTWKY*RIFSKR Trigger: CCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGT...TGAGAACTCTATAGCATCATGAAAACAAAATCCTTCACCTCCCTCTGTCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052580.10 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | GTCCACCGCGCTAGCGCTGGGTGGCATCTTTCTGGTTaGACCACCGGTGTCCTCGAAGCGCGGGGACGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VHRASAGWHLSG*TTGVLEARGRA Trigger: CGCCCGTCCCCGCGCTTCGAGGACACCGGTGGTCCAACCAGAAAGATGCCACCCAGCGCTAGCGCGGTGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS TCA 72 bp | ACGCTCATCGTCCGAGGAGGCGGCCGAGGAGGAGCGTaGGGCTGCGGAGGTGCTGTAAAAGGGGTTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLIVRGGGRGGA*GCGGAVKGVPA Trigger: GGCGGGAACCCCTTTTACAGCACCTCCGCAGCCTCACGCTCCTCCTCGGCCGCCTCCTCGGACGATGAGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
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| CDS GCA 72 bp | GAACACGTCGTCCGAGATGTGCAGGCTCTCGTAGCGTaGACGGGCTGCCTCCAGCAGCGCCGGAGCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EHVVRDVQALVA*TGCLQQRRSPP Trigger: AGGAGGGCTCCGGCGCTGCTGGAGGCAGCCCGTGCACGCTACGAGAGCCTGCACATCTCGGACGACGTGTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
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| CDS CCA 72 bp | CCGGCACAGGCTCCGGGCCACCATGCTGTGCAGCTGTaGCTTGTTCTTCAGAGCGTCCAGGCCATCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAQAPGHHAVQL*LVLQSVQAIWA Trigger: GGCCCAGATGGCCTGGACGCTCTGAAGAACAAGCCACAGCTGCACAGCATGGTGGCCCGGAGCCTGTGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | TCTGGTGCTGGCCCCGGGCGAGTGGGGTGGCAGGGTTaGTCAACATGGATGGAGGGAGACCTGTGCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGAGPGRVGWQG*STWMEGDLCSH Trigger: GTGACTGCACAGGTCTCCCTCCATCCATGTTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAGCACCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | GCCCTTTGTCCTGATCTGGTGCTGGCCCCGGGCGAGTaGGGTGGCAGGGTTGGTCAACATGGATGGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALCPDLVLAPGE*GGRVGQHGWRE Trigger: CTCCCTCCATCCATGTTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAGCACCAGATCAGGACAAAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | CACAGGCTCCGGGCCACCATGCTGTGCAGCTGTGGCTaGTTCTTCAGAGCGTCCAGGCCATCTGGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: HRLRATMLCSCG*FFRASRPSGPP Trigger: TGGTGGCCCAGATGGCCTGGACGCTCTGAAGAACAAGCCACAGCTGCACAGCATGGTGGCCCGGAGCCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 90 bp | GCGTTCCGGCACAGGCTCCGGGCCACCATGCTGTGCAGCTGTGGCTaGTTCTTCAGAGCGTCCAGGCCATCTGGGCCACCACCTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AFRHRLRATMLCSCG*FFRASRPSGPPPSF Trigger: AAAGGAAGGTGGTGGCCCAGATGGCCTGGACGCTCTGAAGAACAAGCCACAGCTGCACAGCATGGTGGCCCGGAGCCTGTGCCGGAACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 72 bp | TGTACCAGCAGATCAGTGACATGTTGCCCTTTGTCCTaGTCTGGTGCTGGCCCCGGGCGAGTGGGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CTSRSVTCCPLS*SGAGPGRVGWQ Trigger: CTGCCACCCCACTCGCCCGGGGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGATCTGCTGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | CCGGGCGAGTGGGGTGGCAGGGTTGGTCAACATGGATaGAGGGAGACCTGTGCAGTCACTCTTCCTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGEWGGRVGQHG*RETCAVTLPRA Trigger: AGCTCTAGGAAGAGTGACTGCACAGGTCTCCCTCCATCCATGTTGACCAACCCTGCCACCCCACTCGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | ATCAGTGACATGTTGCCCTTTGTCCTGATCTGGTGCTaGCCCCGGGCGAGTGGGGTGGCAGGGTTGGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ISDMLPFVLIWC*PRASGVAGLVN Trigger: GTTGACCAACCCTGCCACCCCACTCGCCCGGGGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | GAAGAGCTGGAAGAAGTCCACCGCGCTAGCGCTGGGTaGCATCTTTCTGGTTGGACCACCGGTGTCCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: EELEEVHRASAG*HLSGWTTGVLE Trigger: TTCGAGGACACCGGTGGTCCAACCAGAAAGATGCCACCCAGCGCTAGCGCGGTGGACTTCTTCCAGCTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140012.8 |
||
| CDS CCA 72 bp | ACCATGTTCTTGAGCACGTTGTCCGGGACGAAGAGCTaGAAGAAGTCCACCGCGCTAGCGCTGGGTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TMFLSTLSGTKS*KKSTALALGGI Trigger: GATGCCACCCAGCGCTAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 90 bp | CCATGCGTGGTCTGGCTGGATCGGAAGGCCACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGGGCCTGGCTCATGACGAGGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCVVWLDRKATTWKY*RIFSKRAWLMTRAR Trigger: CCTTGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 72 bp | GGCTCCGGTTGCTATAGAAGCCTCCGCTCCAAATGCTaGGTACCGACTCACAGTGCGAGACGCTGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSGCYRSLRSKC*VPTHSARRWWR Trigger: TCTCCACCAGCGTCTCGCACTGTGAGTCGGTACTCAGCATTTGGAGCGGAGGCTTCTATAGCAACCGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS GCA 72 bp | TCTCTGCCAACGTCACCTCCACCCAGGCACCGTCACTaGCAAACCGCTCCTGGAACTTCCTGGCATACATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLPTSPPPRHRH*QTAPGTSWHTC Trigger: ACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGGTGGAGGTGACGTTGGCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | ACCTCCACCCAGGCACCGTCACTGCCAAACCGCTCCTaGAACTTCCTGGCATACATGTTGGTCTGTACCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSTQAPSLPNRS*NFLAYMLVCTT Trigger: GGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAGTGACGGTGCCTGGGTGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CCA 72 bp | AGTCGAGGAAGGGCTGGACCTTGTAGAGCCCATGCGTaGTCTGGCTGGATCGGAAGGCCACAACATGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRGRAGPCRAHA*SGWIGRPQHGS Trigger: ACTTCCATGTTGTGGCCTTCCGATCCAGCCAGACCACGCATGGGCTCTACAAGGTCCAGCCCTTCCTCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | AAGTGCCCCTTGTTGTACCAGCAGATCAGTGACATGTaGCCCTTTGTCCTGATCTGGTGCTGGCCCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KCPLLYQQISDM*PFVLIWCWPRA Trigger: CGCCCGGGGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGATCTGCTGGTACAACAAGGGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 72 bp | TCCTCTTCCGCAGCTCTCGCTCCGTGCACGTGGCAATaGACACAGGGTCCTCGTCAATCAGGGGTTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSAALAPCTWQ*TQGPRQSGVHV Trigger: TACATGAACCCCTGATTGACGAGGACCCTGTGTTCATTGCCACGTGCACGGAGCGAGAGCTGCGGAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 90 bp | TTCCTGGCATACATGTTGGTCTGTACCACCATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGGAAGAAGTCCACCGCGCTAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLAYMLVCTTMFLST*SGTKSWKKSTALAL Trigger: CAGCGCTAGCGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CAA 90 bp | GCACCGTCACTGCCAAACCGCTCCTGGAACTTCCTGGCATACATGTaGGTCTGTACCACCATGTTCTTGAGCACGTTGTCCGGGACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: APSLPNRSWNFLAYM*VCTTMFLSTLSGTK Trigger: CTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAGTGACGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS TCA 72 bp | GAAGCGGAAGTGCCCCTTGTTGTACCAGCAGATCAGTaGCATGTTGCCCTTTGTCCTGATCTGGTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EAEVPLVVPADQ*HVALCPDLVLA Trigger: GGCCAGCACCAGATCAGGACAAAGGGCAACATGTCACTGATCTGCTGGTACAACAAGGGGCACTTCCGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS TCA 72 bp | ACTTGCTGTACTTATCGTCATATCTGCAGATGTAGCTaGGGTGAGCCGCAAAGGCCTCCACGGCCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCCTYRHICRCS*GEPQRPPRPEG Trigger: GCCCTCTGGCCGTGGAGGCCTTTGCGGCTCACCTCAGCTACATCTGCAGATATGACGATAAGTACAGCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CAA 72 bp | GTCTGGCTGGATCGGAAGGCCACAACATGGAAGTACTaGAGGATTTTCTCGAAGCGGGCCTGGCTCATGACG | + |
|
Preference number: 6 (lower is better) Translates to: VWLDRKATTWKY*RIFSKRAWLMT Trigger: CGTCATGAGCCAGGCCCGCTTCGAGAAAATCCTCAAGTACTTCCATGTTGTGGCCTTCCGATCCAGCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
||
| CDS CAA 90 bp | TCCTGGAACTTCCTGGCATACATGTTGGTCTGTACCACCATGTTCTaGAGCACGTTGTCCGGGACGAAGAGCTGGAAGAAGTCCACCGCG | + |
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Preference number: 6 (lower is better) Translates to: SWNFLAYMLVCTTMF*STLSGTKSWKKSTA Trigger: CGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 72 bp | CTGTGCCCGGCTGTACTTCTTCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTAGGCGTTGTTGACGGC | + |
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Preference number: 6 (lower is better) Translates to: LCPAVLLHVVGV*HFVQDVGVVDG Trigger: GCCGTCAACAACGCCTACATCCTGTACAAAATGTCAGACGCCTACCACGTGAAGAAGTACAGCCGGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | TACATGTTGGTCTGTACCACCATGTTCTTGAGCACGTaGTCCGGGACGAAGAGCTGGAAGAAGTCCACCGCG | + |
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Preference number: 6 (lower is better) Translates to: YMLVCTTMFLST*SGTKSWKKSTA Trigger: CGCGGTGGACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | CTGCCAAACCGCTCCTGGAACTTCCTGGCATACATGTaGGTCTGTACCACCATGTTCTTGAGCACGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LPNRSWNFLAYM*VCTTMFLSTLS Trigger: GGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAAGTTCCAGGAGCGGTTTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS TCA 72 bp | TCCTGGCATACATGTTGGTCTGTACCACCATGTTCTTaGGCACGTTGTCCGGGACGAAGAGCTGGAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SWHTCWSVPPCS*ARCPGRRAGRS Trigger: ACTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | TTCCTGGCATACATGTTGGTCTGTACCACCATGTTCTaGAGCACGTTGTCCGGGACGAAGAGCTGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLAYMLVCTTMF*STLSGTKSWKK Trigger: CTTCTTCCAGCTCTTCGTCCCGGACAACGTGCTCAAGAACATGGTGGTACAGACCAACATGTATGCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | GTTGTTGACGGCGATGCTGATGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGGCTTGTGAGAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VVDGDADGEPEH*LPRLVWLVRDE Trigger: TTCATCTCTCACAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCCATCAGCATCGCCGTCAACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 90 bp | GATGTAGGCGTTGTTGACGGCGATGCTGATGGCGAACCAGAACACTaGCTGCCACGTCTTGTTTGGCTTGTGAGAGATGAAATACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DVGVVDGDADGEPEH*LPRLVWLVRDEILA Trigger: AGCAAGTATTTCATCTCTCACAAGCCAAACAAGACGTGGCAGCAAGTGTTCTGGTTCGCCATCAGCATCGCCGTCAACAACGCCTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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| CDS CAA 72 bp | CTTCCTAGAGCTGAGGAGGCCACAGCAGTAGATCCCTaGCTTCTCAAATTCTTCGAACAGATTGAGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LPRAEEATAVDP*LLKFFEQIEAG Trigger: ACCAGCCTCAATCTGTTCGAAGAATTTGAGAAGCAAGGGATCTACTGCTGTGGCCTCCTCAGCTCTAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052580.10 ENSMUST00000136892.3 ENSMUST00000140012.8 ENSMUST00000172566.8 |
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