Pregenerated sensors for PGBD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055313Ensembl transcript IDs: ENSMUST00000099719.10, ENSMUST00000122872.9, ENSMUST00000151743.9
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGCCTGGGTTACAGATTCTGTGCAACTGCCACGCATTGCTCATaGCTACATCGACCATGTAACTCACCAAAACCCAGAGCCGCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: GSLGYRFCATATHCS*LHRPCNSPKPRAAS Trigger: AGAAGCGGCTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAGTTGCACAGAATCTGTAACCCAGGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR GCA 90 bp | CTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTGCCACGCATTaGTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: LKGSLGYRFCATATH*SWLHRPCNSPKPRA Trigger: GGCTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 90 bp | CATTATGGAGTCATAGTTCACTTGCTCCAAATGTCTCTCATTGGATaGGTAACCACTGATGACCTCAATCTAGACTATGTCCAATCACCT | + |
|
Preference number: 1 (lower is better) Translates to: HYGVIVHLLQMSLIG*VTTDDLNLDYVQSP Trigger: AGGTGATTGGACATAGTCTAGATTGAGGTCATCAGTGGTTACTCATCCAATGAGAGACATTTGGAGCAAGTGAACTATGACTCCATAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 90 bp | CTCAGGATAACTGTTACACAGATTGCTTCATTACTTTCCTCTCTCTaGCTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCAC | + |
|
Preference number: 1 (lower is better) Translates to: LRITVTQIASLLSSL*LLPTHNIFFSIQRH Trigger: GTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGAGAGAGGAAAGTAATGAAGCAATCTGTGTAACAGTTATCCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR GCA 90 bp | ACCACTGATGACCTCAATCTAGACTATGTCCAATCACCTTATACTTaGTTTCTTCTCAGGATAACTGTTACACAGATTGCTTCATTACTT | + |
|
Preference number: 1 (lower is better) Translates to: TTDDLNLDYVQSPYT*FLLRITVTQIASLL Trigger: AAGTAATGAAGCAATCTGTGTAACAGTTATCCTGAGAAGAAAGCAAGTATAAGGTGATTGGACATAGTCTAGATTGAGGTCATCAGTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTCACAGCTTGCTTTGCTaGCTGGTTCTATGCCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SGNLGDLKGSLGYRFCATHSLLC*LVLCLQ Trigger: CTGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTG...AGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTGCTTGCTTTGCTGACTaGTTCTATGCCTACAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: SGNLGDLKGSLGYRFCATACFAD*FYAYSI Trigger: AATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGC...AGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAGCTTGCTTTGCTGACTaGTTCTATGCCTACAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAACFAD*FYAYSI Trigger: AATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGC...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACAATGGATGTTACCTaGAGGAAGGAACTCCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: ISGNLGDLKGSLGYRFCATMDVT*RKELLI Trigger: GATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGT...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGGCTTGCTTTGCTGACTaGTTCTATGCCTACAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: ISIMSQAKTCHTFLETWEACFAD*FYAYSI Trigger: AATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGC...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGCACAGCTTGCTTTGCTaGCTGGTTCTATGCCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: IPHITSQWMLPEGRNSLSHSLLC*LVLCLQ Trigger: CTGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTG...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR CAA 90 bp | TTACCTGAAGGAAGGAACTCCTTATCGTCAGCTACACAGCTTGCTTaGCTGACTGGTTCTATGCCTACAGCATTTGAACACAGACTAATA | + |
|
Preference number: 2 (lower is better) Translates to: LPEGRNSLSSATQLA*LTGSMPTAFEHRLI Trigger: TATTAGTCTGTGTTCAAATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTGTAGCTGACGATAAGGAGTTCCTTCCTTCAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACACATGCCACACATTTCTaGAAACCTGGGAGATCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SDFSQLITFSSVFKGTATHATHF*KPGRSK Trigger: TTTAGATCTCCCAGGTTTCCAGAAATGTGTGGCATG...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACACTTCTTCTTCAAAGCTaGCATCAGTTTAACAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SDFSQLITFSSVFKGTATLLLQS*HQFNRC Trigger: ACACCTGTTAAACTGATGTCAGCTTTGAAGAAGAAG...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR TCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGCTTCTTCTTCAAAGCTaGCATCAGTTTAACAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: DVNNTSDIITPSPLHLLWLLLQS*HQFNRC Trigger: ACACCTGTTAAACTGATGTCAGCTTTGAAGAAGAAG...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR GCA 72 bp | GGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTaGAACTGCCACGCATTGCTCATGGCTACATCGACC | + |
|
Preference number: 3 (lower is better) Translates to: GRSKGEPGLQIL*NCHALLMATST Trigger: GGTCGATGTAGCCATGAGCAATGCGTGGCAGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR GCA 72 bp | AGCCTGGGTTACAGATTCTGTGCAACTGCCACGCATTaGTCATGGCTACATCGACCATGTAACTCACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLGYRFCATATH*SWLHRPCNSPK Trigger: TTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAGTTGCACAGAATCTGTAACCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 72 bp | GGAACTCCTTATCGTCAGCTACACAGCTTGCTTTGCTaGCTGGTTCTATGCCTACAGCATTTGAACACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GTPYRQLHSLLC*LVLCLQHLNTD Trigger: GTCTGTGTTCAAATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTGTAGCTGACGATAAGGAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 72 bp | GCTTGCTTTGCTGACTGGTTCTATGCCTACAGCATTTaGACACAGACTAATAAAGCCATCACCATGCCAACG | + |
|
Preference number: 3 (lower is better) Translates to: ACFADWFYAYSI*TQTNKAITMPT Trigger: CGTTGGCATGGTGATGGCTTTATTAGTCTGTGTTCAAATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGGTGGACATTTTTGTTTaGTTTTCACAAAGCGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISIMSQAKTCHTFLETWEVDIFV*FSQSDP Trigger: AGGATCGCTTTGTGAAAACAAAACAAAAATGTCCAC...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 72 bp | GTCATAGTTCACTTGCTCCAAATGTCTCTCATTGGATaGGTAACCACTGATGACCTCAATCTAGACTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VIVHLLQMSLIG*VTTDDLNLDYV Trigger: GACATAGTCTAGATTGAGGTCATCAGTGGTTACTCATCCAATGAGAGACATTTGGAGCAAGTGAACTATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR-3UTR CAA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTGTGGACATTTTTGTTTaGTTTTCACAAAGCGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: HITSQWMLPEGRNSLSSAVDIFV*FSQSDP Trigger: AGGATCGCTTTGTGAAAACAAAACAAAAATGTCCAC...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR GCA 72 bp | ACAGCATTTGAACACAGACTAATAAAGCCATCACCATaGCAACGGCATAAAAATATCTCCTCCTTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TAFEHRLIKPSP*QRHKNISSFSS Trigger: GGAAGAAAAGGAGGAGATATTTTTATGCCGTTGGCATGGTGATGGCTTTATTAGTCTGTGTTCAAATGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR TCA 72 bp | ACTGTTACACAGATTGCTTCATTACTTTCCTCTCTCTaGCTTCTCCCAACTCATAACATTTTCTTCAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: TVTQIASLLSSL*LLPTHNIFFSI Trigger: AATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGAGAGAGGAAAGTAATGAAGCAATCTGTGTAACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGGCACAGAGAGTAGCCTaGTGCCCTGTGTCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPEAQRVA*CPVSPR Trigger: ACGTGGAGACACAGGGCAGCAGGCTACTCTCTGTGC...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCACCAGGAGTCATGGGGTaGGTGGCAGCTCCCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAPGVMG*VAAPDS Trigger: ACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGG...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTTCCCAGGGGGAGCTCTaGAAAGTCTCTTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNLGDLKGSLGYRFCATSQGEL*KVSCPG Trigger: CCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGGGA...AGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | AACTCCTTATCGTCAGCTACACAGCTTGCTTTGCTGACTGGTTCTATGCCTACACCAGGAGTCATGGGGTaGGTGGCAGCTCCCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSSATQLALLTGSMPTPGVMG*VAAPDS Trigger: ACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGG...TGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTGTAGCTGACGATAAGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAGCACAGAGAGTAGCCTaGTGCCCTGTGTCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAAQRVA*CPVSPR Trigger: ACGTGGAGACACAGGGCAGCAGGCTACTCTCTGTGC...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGCAGAGAGTAGCCTGCTaGCCTGTGTCTCCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWEQRVAC*PVSPRS Trigger: GGAACGTGGAGACACAGGGCAGCAGGCTACTCTCTG...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGGCTTACTGTCTCGTTTaGTCCAGCTCTTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPEAYCLV*SSSSQG Trigger: TCCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGC...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | AACTCCTTATCGTCAGCTACACAGCTTGCTTTGCTGACTGGTTCTATGCCTACACTCTTGTCCAGGGAGTaGCCGAAGACTGCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSSATQLALLTGSMPTLLSRE*PKTAGD Trigger: ATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAG...TGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTGTAGCTGACGATAAGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGGTCTTCCTCTGTCTCTaGCTCATCAGAAAACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPEVFLCL*LIRKRM Trigger: CATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGAC...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCATCCAGAATCCAGGGCTaGCCAGCTTGGAAAGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCASRIQG*PAWKVR Trigger: CCTAACTTTCCAAGCTGGTCAGCCCTGGATTCTGGA...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCGACAGTGTTCAAAGTaGAGACTGCCTTTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPERQCSK*RLPFQW Trigger: CCACTGAAAAGGCAGTCTCCACTTTGAACACTGTCG...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CCTACAGCATTTGAACACAGACTAATAAAGCCATCACCATGCCAACGGCATAAAGAGTCATGGGGTGGGTaGCAGCTCCCGACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAFEHRLIKPSPCQRHKESWGG*QLPTVF Trigger: GAACACTGTCGGGAGCTGCCACCCACCCCATGACTC...TTTATGCCGTTGGCATGGTGATGGCTTTATTAGTCTGTGTTCAAATGCTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGACGCAATGTGCATCTTaGCCCAGGAGTCATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWETQCAS*PRSHGV Trigger: CACCCCATGACTCCTGGGCCAAGATGCACATTGCGT...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGTCCAGAATCCAGGGCTaGCCAGCTTGGAAAGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWESRIQG*PAWKVR Trigger: CCTAACTTTCCAAGCTGGTCAGCCCTGGATTCTGGA...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAGTTCAAAGTGGAGACTaGCTTTTCAGTGGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAVQSGD*LFSGGR Trigger: CCTTCCCCCACTGAAAAGGCAGTCTCCACTTTGAAC...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACACCAGGAGTCATGGGGTaGGTGGCAGCTCCCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATPGVMG*VAAPDS Trigger: ACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGG...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAGCTTACTGTCTCGTTTaGTCCAGCTCTTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAAYCLV*SSSSQG Trigger: TCCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGC...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | GCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCCAATACATCCCCATTCTaGGATGCCTTACAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATHCSWLHRPCNSPKPRANTSPF*DALQIH Trigger: GTGGATTTGTAAGGCATCCCAGAATGGGGATGTATT...GGCTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTTTTTCCCTCCCTTTCTaGGTAATGTACTGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGNLGDLKGSLGYRFCATFSLPF*VMYCKD Trigger: GTCCTTGCAGTACATTACTCAGAAAGGGAGGGAAAA...AGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGGCTTCATCACCTCTCTaGAGAGGATATGTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWEASSPL*RGYVCL Trigger: GAGGCAGACATATCCTCTGCAGAGAGGTGATGAAGC...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCCCAGGGGGAGCTCTaGAAAGTCTCTTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPHITSQWMLPEGRNSLSSQGEL*KVSCPG Trigger: CCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGGGA...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGTCTTCTCAGGGATGCTaGATGCCTTTATCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPESSQGC*MPLSSF Trigger: GAAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGA...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGCTCTTGTCCAGGGAGTaGCCGAAGACTGCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPHITSQWMLPEGRNSLSLLSRE*PKTAGD Trigger: ATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAG...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCATGCAGAGGATATGTCTaGCTCATGGTAACAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCACRGYV*LMVTEV Trigger: CACTTCTGTTACCATGAGGCAGACATATCCTCTGCA...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACACAGAGAGTAGCCTGCTaGCCTGTGTCTCCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATQRVAC*PVSPRS Trigger: GGAACGTGGAGACACAGGGCAGCAGGCTACTCTCTG...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACAGCACAGAGAGTAGCCTaGTGCCCTGTGTCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATAQRVA*CPVSPR Trigger: ACGTGGAGACACAGGGCAGCAGGCTACTCTCTGTGC...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGCGACAGTGTTCAAAGTaGAGACTGCCTTTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWERQCSK*RLPFQW Trigger: CCACTGAAAAGGCAGTCTCCACTTTGAACACTGTCG...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACTATGTCCAATCACCTTATACTTGCTTTCTTCTCAGGATAACTGTGAGTCATGGGGTGGGTaGCAGCTCCCGACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSRLCPITLYLLSSQDNCESWGG*QLPTVF Trigger: GAACACTGTCGGGAGCTGCCACCCACCCCATGACTC...ACAGTTATCCTGAGAAGAAAGCAAGTATAAGGTGATTGGACATAGTCTAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTGAGTCATGGGGTGGGTaGCAGCTCCCGACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFESWGG*QLPTVF Trigger: GAACACTGTCGGGAGCTGCCACCCACCCCATGACTC...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGTTCAAAGAGCTCTACTaGGTTCAACTTCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPEFKELY*VQLLTL Trigger: AAGAGTGAGAAGTTGAACCCAGTAGAGCTCTTTGAA...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR CAA 72 bp | GGAAGGAACTCCTTATCGTCAGCTACACAGCTTGCTTaGCTGACTGGTTCTATGCCTACAGCATTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRNSLSSATQLA*LTGSMPTAFEH Trigger: GTGTTCAAATGCTGTAGGCATAGAACCAGTCAGCAAAGCAAGCTGTGTAGCTGACGATAAGGAGTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGAGGAGATGGAGGCTCTaGTACTCCTCCATAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHITSQWMLPEGRNSLSRRWRL*YSSIEA Trigger: AGCCTCTATGGAGGAGTATCAGAGCCTCCATCTCCT...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGTTTTCCCTCCCTTTCTaGGTAATGTACTGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWEFSLPF*VMYCKD Trigger: GTCCTTGCAGTACATTACTCAGAAAGGGAGGGAAAA...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | CCTACAGCATTTGAACACAGACTAATAAAGCCATCACCATGCCAACGGCATAAAGCTTCATCACCTCTCTaGAGAGGATATGTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAFEHRLIKPSPCQRHKASSPL*RGYVCL Trigger: GAGGCAGACATATCCTCTGCAGAGAGGTGATGAAGC...TTTATGCCGTTGGCATGGTGATGGCTTTATTAGTCTGTGTTCAAATGCTGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGCAGAGAGTAGCCTGCTaGCCTGTGTCTCCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWQRVAC*PVSPRS Trigger: GGAACGTGGAGACACAGGGCAGCAGGCTACTCTCTG...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGCATCATGTCCCAAGCGAAAACATGCCACACATTTCTGGAAACCTGGGAGAGCTCTTCTCAGGGATaGTGGATGCCTTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISIMSQAKTCHTFLETWESSSQG*WMPLSS Trigger: AGAAGATAAAGGCATCCAGCATCCCTGAGAAGAGCT...CTCCCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACTATGTCCAATCACCTTATACTTGCTTTCTTCTCAGGATAACTGTTCCCAGGGGGAGCTCTaGAAAGTCTCTTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRLCPITLYLLSSQDNCSQGEL*KVSCPG Trigger: CCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGGGA...ACAGTTATCCTGAGAAGAAAGCAAGTATAAGGTGATTGGACATAGTCTAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | CAATCTAGACTATGTCCAATCACCTTATACTTGCTTTCTTCTCAGGATAACTGTCTCTTGTCCAGGGAGTaGCCGAAGACTGCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSRLCPITLYLLSSQDNCLLSRE*PKTAGD Trigger: ATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAG...ACAGTTATCCTGAGAAGAAAGCAAGTATAAGGTGATTGGACATAGTCTAGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTGTCTTCCTCTGTCTCTaGCTCATCAGAAAACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HITSQWMLPEGRNSLSSAVFLCL*LIRKRM Trigger: CATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGAC...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGGTTCAAAGTGGAGACTaGCTTTTCAGTGGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPHITSQWMLPEGRNSLSVQSGD*LFSGGR Trigger: CCTTCCCCCACTGAAAAGGCAGTCTCCACTTTGAAC...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CCTACAGCATTTGAACACAGACTAATAAAGCCATCACCATGCCAACGGCATAAAAGACTGCCTTTTCAGTaGGGGAAGGAGAATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAFEHRLIKPSPCQRHKRLPFQ*GKENLC Trigger: ACAGAGATTCTCCTTCCCCCACTGAAAAGGCAGTCT...TTTATGCCGTTGGCATGGTGATGGCTTTATTAGTCTGTGTTCAAATGCTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099719.10 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTACGCAATGTGCATCTTaGCCCAGGAGTCATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFTQCAS*PRSHGV Trigger: CACCCCATGACTCCTGGGCCAAGATGCACATTGCGT...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCATTCAAAGAGCTCTACTaGGTTCAACTTCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAFKELY*VQLLTL Trigger: AAGAGTGAGAAGTTGAACCCAGTAGAGCTCTTTGAA...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGTTCCCATTCAGAAATTaGTCACAATCAAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAHGYIDHVTHQNPEFPFRN*SQSKHS Trigger: TGAATGCTTTGATTGTGACCAATTTCTGAATGGGAA...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGAGGAGATGGAGGCTCTaGTACTCCTCCATAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWRRWRL*YSSIEA Trigger: AGCCTCTATGGAGGAGTATCAGAGCCTCCATCTCCT...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTTTTCTAACCAGGGTCTaGTCAGAATCAGAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HITSQWMLPEGRNSLSSAFLTRV*SESEIS Trigger: GGAAATCTCTGATTCTGATCAGACCCTGGTTAGAAA...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACAAGACTGCCTTTTCAGTaGGGGAAGGAGAATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATRLPFQ*GKENLC Trigger: ACAGAGATTCTCCTTCCCCCACTGAAAAGGCAGTCT...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099719.10 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTTCTTCTCAGGGATGCTaGATGCCTTTATCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HITSQWMLPEGRNSLSSASSQGC*MPLSSF Trigger: GAAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGA...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCATTCCCATTCAGAAATTaGTCACAATCAAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISGNLGDLKGSLGYRFCAFPFRN*SQSKHS Trigger: TGAATGCTTTGATTGTGACCAATTTCTGAATGGGAA...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACATTTTCCCTCCCTTTCTaGGTAATGTACTGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATFSLPF*VMYCKD Trigger: GTCCTTGCAGTACATTACTCAGAAAGGGAGGGAAAA...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTGTCTTCCTCTGTCTCTaGCTCATCAGAAAACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFVFLCL*LIRKRM Trigger: CATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGAC...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACATGCAGAGGATATGTCTaGCTCATGGTAACAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATCRGYV*LMVTEV Trigger: CACTTCTGTTACCATGAGGCAGACATATCCTCTGCA...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACACTCAGGGATGCTGGATaGCTTTATCTTCTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATLRDAG*LYLLSL Trigger: GAGAGAAAGAAGATAAAGGCATCCAGCATCCCTGAG...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | CAATCTAGACTATGTCCAATCACCTTATACTTGCTTTCTTCTCAGGATAACTGTACACACCTCATTTCCTaGACTGTGACTTCTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSRLCPITLYLLSSQDNCTHLIS*TVTSRL Trigger: CAGCCTAGAAGTCACAGTGCAGGAAATGAGGTGTGT...ACAGTTATCCTGAGAAGAAAGCAAGTATAAGGTGATTGGACATAGTCTAGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGCGACAGTGTTCAAAGTaGAGACTGCCTTTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWRQCSK*RLPFQW Trigger: CCACTGAAAAGGCAGTCTCCACTTTGAACACTGTCG...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGAGACTGCCTTTTCAGTaGGGGAAGGAGAATCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWRLPFQ*GKENLS Trigger: AGAGAGATTCTCCTTCCCCCACTGAAAAGGCAGTCT...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122872.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACATTTCTAACCAGGGTCTaGTCAGAATCAGAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATFLTRV*SESEIS Trigger: GGAAATCTCTGATTCTGATCAGACCCTGGTTAGAAA...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGTGCAGAGGATATGTCTaGCTCATGGTAACAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWCRGYV*LMVTEV Trigger: CACTTCTGTTACCATGAGGCAGACATATCCTCTGCA...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGCTCAGGGATGCTGGATaGCTTTATCTTCTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWLRDAG*LYLLSL Trigger: GAGAGAAAGAAGATAAAGGCATCCAGCATCCCTGAG...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR GCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTAGCTCTTCTCAGGGATaGTGGATGCCTTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFSSSQG*WMPLSS Trigger: AGAAGATAAAGGCATCCAGCATCCCTGAGAAGAGCT...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTCTCCCAACTCATAACATTTTCTTCAGTATTCAAAGGCACAGCTACAAATACATCCCCATTCTaGGATGCCTTACAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDFSQLITFSSVFKGTATNTSPF*DALQIH Trigger: GTGGATTTGTAAGGCATCCCAGAATGGGGATGTATT...TGTAGCTGTGCCTTTGAATACTGAAGAAAATGTTATGAGTTGGGAGAAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR TCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTTTTCTAACCAGGGTCTaGTCAGAATCAGAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFFLTRV*SESEIS Trigger: GGAAATCTCTGATTCTGATCAGACCCTGGTTAGAAA...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTTCTTCTCAGGGATGCTaGATGCCTTTATCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFSSQGC*MPLSSF Trigger: GAAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGA...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTAATACATCCCCATTCTaGGATGCCTTACAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFNTSPF*DALQIH Trigger: GTGGATTTGTAAGGCATCCCAGAATGGGGATGTATT...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGTTCAAAGAGCTCTACTaGGTTCAACTTCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTSDIITPSPLHLLWFKELY*VQLLTL Trigger: AAGAGTGAGAAGTTGAACCCAGTAGAGCTCTTTGAA...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| 3UTR CAA 72 bp | GTTAGCATATCCTCCCGCATGAGTTGTATATCTGTTTaGTATCTATTCTGGACTATGAATTCAGTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSISSRMSCISV*YLFWTMNSVSF Trigger: GAATGACACTGAATTCATAGTCCAGAATAGATACAAAACAGATATACAACTCATGCGGGAGGATATGCTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTTTCCCATTCAGAAATTaGTCACAATCAAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFFPFRN*SQSKHS Trigger: TGAATGCTTTGATTGTGACCAATTTCTGAATGGGAA...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 90 bp | TTCAGTGGGGGAAGGAGAATCTCTCTCACATCCCAGGGGGAGCTCTaGAAAGTCTCTTGTCCAGGGAGTGACCGAAGACTGCAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSGGRRISLTSQGEL*KVSCPGSDRRLQEM Trigger: CATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGGGATGTGAGAGAGATTCTCCTTCCCCCACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122872.9 |
||
| CDS TCA 90 bp | TCTCTTGTCCAGGGAGTGACCGAAGACTGCAGGAGATGGAGGCTCTaGTACTCCTCCATAGAGGCTCCTGGATACTCTGTCACCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVQGVTEDCRRWRL*YSSIEAPGYSVTTR Trigger: CCTAGTGGTGACAGAGTATCCAGGAGCCTCTATGGAGGAGTATCAGAGCCTCCATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 90 bp | CTTTCTCTCAGGCTGTACCTCAGGCTCATTGTCTTCCTCTGTCTCTaGCTCATCAGAAAACGCATGGCCTTGGAGCAGCTCGATCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLRLYLRLIVFLCL*LIRKRMALEQLDHS Trigger: AGAGTGATCGAGCTGCTCCAAGGCCATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGACAATGAGCCTGAGGTACAGCCTGAGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 90 bp | TGGAGCAGCTCGATCACTCTAAATTTGGCTTTTTCCCTCCCTTTCTaGGTAATGTACTGCAAGGACGCAATGTGCATCTTGGCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WSSSITLNLAFSLPF*VMYCKDAMCILAQE Trigger: CTCCTGGGCCAAGATGCACATTGCGTCCTTGCAGTACATTACTCAGAAAGGGAGGGAAAAAGCCAAATTTAGAGTGATCGAGCTGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | GCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCCTCGATCACTCTAAATTaGGCTTTTTCCCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATHCSWLHRPCNSPKPRASITLN*AFSLPF Trigger: GAAAGGGAGGGAAAAAGCCAAATTTAGAGTGATCGA...GGCTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 90 bp | TCAGGCTCATTGTCTTCCTCTGTCTCTGACTCATCAGAAAACGCATaGCCTTGGAGCAGCTCGATCACTCTAAATTTGGCTTTTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLSSSVSDSSENA*PWSSSITLNLAFSL Trigger: GAGGGAAAAAGCCAAATTTAGAGTGATCGAGCTGCTCCAAGGCCATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGACAATGAGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTGGCTTACTGTCTCGTTaGGTCCAGCTCTTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HITSQWMLPEGRNSLSSAGLLSR*VQLFSG Trigger: CCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGCC...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 90 bp | TCATTGTCTTCCTCTGTCTCTGACTCATCAGAAAACGCATGGCCTTaGAGCAGCTCGATCACTCTAAATTTGGCTTTTTCCCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSVSDSSENAWP*SSSITLNLAFSLPF Trigger: GAAAGGGAGGGAAAAAGCCAAATTTAGAGTGATCGAGCTGCTCCAAGGCCATGCGTTTTCTGATGAGTCAGAGACAGAGGAAGACAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCAACTTCGATCACTCTAAATTaGGCTTTTTCCCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGNLGDLKGSLGYRFCATSITLN*AFSLPF Trigger: GAAAGGGAGGGAAAAAGCCAAATTTAGAGTGATCGA...AGTTGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCTCACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGGGCTTACTGTCTCGTTaGGTCCAGCTCTTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPHITSQWMLPEGRNSLSGLLSR*VQLFSG Trigger: CCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGCC...CGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTGAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCTTCCCATTCAGAAATaGGTCACAATCAAAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRIAHGYIDHVTHQNPELPIQK*VTIKAF Trigger: GAATGCTTTGATTGTGACCAATTTCTGAATGGGAAG...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | GCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGCCAATTTTATAGCCAATTaGAAGAGGCTTCCCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATHCSWLHRPCNSPKPRANFIAN*KRLPIQ Trigger: CTGAATGGGAAGCCTCTTCAAATTGGCTATAAAATT...GGCTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 90 bp | GTTCAACTTCTCACTCTTAAGATTCAAAAGTCCAGAATCCAGGGCTaGCCAGCTTGGAAAGTTAGGCTTACTGTCTCGTTTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLLTLKIQKSRIQG*PAWKVRLTVSFGPA Trigger: AGCTGGACCAAACGAGACAGTAAGCCTAACTTTCCAAGCTGGTCAGCCCTGGATTCTGGACTTTTGAATCTTAAGAGTGAGAAGTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGGAAACCTGGGAGATCTAAAGGGGAGCCTGGGTTACAGATTCTGTGCATCGATCACTCTAAATTaGGCTTTTTCCCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISGNLGDLKGSLGYRFCASITLN*AFSLPF Trigger: GAAAGGGAGGGAAAAAGCCAAATTTAGAGTGATCGA...TGCACAGAATCTGTAACCCAGGCTCCCCTTTAGATCTCCCAGGTTTCCAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCACGCATTGCTCATGGCTACATCGACCATGTAACTCACCAAAACCCAGAGAATTTTATAGCCAATTaGAAGAGGCTTCCCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPRIAHGYIDHVTHQNPENFIAN*KRLPIQ Trigger: CTGAATGGGAAGCCTCTTCAAATTGGCTATAAAATT...CTCTGGGTTTTGGTGAGTTACATGGTCGATGTAGCCATGAGCAATGCGTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGGGCTTACTGTCTCGTTaGGTCCAGCTCTTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTSDIITPSPLHLLWGLLSR*VQLFSG Trigger: CCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGCC...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 90 bp | GGAAGGAGAATCTCTGTTCAGTTCAGTATCATTTCCTGCAGTGGTTaGGGATGTAACATCGAAGATGTAACAAGGAGTTTTGAGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRRISVQFSIISCSG*GCNIEDVTRSFEAL Trigger: AAGAGCCTCAAAACTCCTTGTTACATCTTCGATGTTACATCCTCAACCACTGCAGGAAATGATACTGAACTGAACAGAGATTCTCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099719.10 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | GATGTAAACAATACCAGTGACATAATCACACCTTCTCCATTACATTTGCTTTGGTGTACCTCAGGCTCATaGTCTTCCTCTGTCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTSDIITPSPLHLLWCTSGS*SSSVSD Trigger: GTCAGAGACAGAGGAAGACAATGAGCCTGAGGTACA...CCAAAGCAAATGTAATGGAGAAGGTGTGATTATGTCACTGGTATTGTTTACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTTGTACCTCAGGCTCATaGTCTTCCTCTGTCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFCTSGS*SSSVSD Trigger: GTCAGAGACAGAGGAAGACAATGAGCCTGAGGTACA...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | CACATAACTTCACAATGGATGTTACCTGAAGGAAGGAACTCCTTATCGTCAGCTCTTCCCATTCAGAAATaGGTCACAATCAAAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: HITSQWMLPEGRNSLSSALPIQK*VTIKAF Trigger: GAATGCTTTGATTGTGACCAATTTCTGAATGGGAAG...AGCTGACGATAAGGAGTTCCTTCCTTCAGGTAACATCCATTGTGAAGTTATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS-3UTR CAA 90 bp | TTTAACAGGTGTAAAGAAGCTATCAAAACTCAAGTGATAGGGATGGTGACCTTTCTTCCCATTCAGAAATaGGTCACAATCAAAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FNRCKEAIKTQVIGMVTFLPIQK*VTIKAF Trigger: GAATGCTTTGATTGTGACCAATTTCTGAATGGGAAG...AAAGGTCACCATCCCTATCACTTGAGTTTTGATAGCTTCTTTACACCTGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | GCAATGTGCATCTTGGCCCAGGAGTCATGGGGTGGGTaGCAGCTCCCGACAGTGTTCAAAGTGGAGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AMCILAQESWGG*QLPTVFKVETA Trigger: GGCAGTCTCCACTTTGAACACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGGGCCAAGATGCACATTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | GGACGCAATGTGCATCTTGGCCCAGGAGTCATGGGGTaGGTGGCAGCTCCCGACAGTGTTCAAAGTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRNVHLGPGVMG*VAAPDSVQSGD Trigger: GTCTCCACTTTGAACACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGGGCCAAGATGCACATTGCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | TGCAAGGACGCAATGTGCATCTTGGCCCAGGAGTCATaGGGTGGGTGGCAGCTCCCGACAGTGTTCAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CKDAMCILAQES*GGWQLPTVFKV Trigger: CACTTTGAACACTGTCGGGAGCTGCCACCCACCCCATGACTCCTGGGCCAAGATGCACATTGCGTCCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 72 bp | CCAGGGGGAGCTCTGGAAAGTCTCTTGTCCAGGGAGTaGCCGAAGACTGCAGGAGATGGAGGCTCTGATACT | + |
|
Preference number: 6 (lower is better) Translates to: PGGALESLLSRE*PKTAGDGGSDT Trigger: AGTATCAGAGCCTCCATCTCCTGCAGTCTTCGGTCACTCCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 72 bp | CAGGGAGTGACCGAAGACTGCAGGAGATGGAGGCTCTaGTACTCCTCCATAGAGGCTCCTGGATACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QGVTEDCRRWRL*YSSIEAPGYSV Trigger: GACAGAGTATCCAGGAGCCTCTATGGAGGAGTATCAGAGCCTCCATCTCCTGCAGTCTTCGGTCACTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS GCA 72 bp | GTCGCCGCTTCATCACCTCTCTGCAGAGGATATGTCTaGCTCATGGTAACAGAAGTGCCGAAATCGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VAASSPLCRGYV*LMVTEVPKSQA Trigger: CGCCTGCGATTTCGGCACTTCTGTTACCATGAGGCAGACATATCCTCTGCAGAGAGGTGATGAAGCGGCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | GGAAGGAGAATCTCTCTCACATCCCAGGGGGAGCTCTaGAAAGTCTCTTGTCCAGGGAGTGACCGAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRISLTSQGEL*KVSCPGSDRRL Trigger: CAGTCTTCGGTCACTCCCTGGACAAGAGACTTTCCAGAGCTCCCCCTGGGATGTGAGAGAGATTCTCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122872.9 |
||
| CDS CAA 90 bp | GAATCCAGGGCTGACCAGCTTGGAAAGTTAGGCTTACTGTCTCGTTaGGTCCAGCTCTTCTCAGGGATGCTGGATGCCTTTATCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESRADQLGKLGLLSR*VQLFSGMLDAFIFF Trigger: AAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGCCTAACTTTCCAAGCTGGTCAGCCCTGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS GCA 72 bp | AGATTCTCCAGTAATGTCGCCGCTTCATCACCTCTCTaGAGAGGATATGTCTGCCTCATGGTAACAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFSSNVAASSPL*RGYVCLMVTEV Trigger: CACTTCTGTTACCATGAGGCAGACATATCCTCTGCAGAGAGGTGATGAAGCGGCGACATTACTGGAGAATCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS GCA 72 bp | GCTTACTGTCTCGTTTGGTCCAGCTCTTCTCAGGGATaGTGGATGCCTTTATCTTCTTTCTCTCAGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AYCLVWSSSSQG*WMPLSSFSQAV Trigger: TACAGCCTGAGAGAAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGAGCTGGACCAAACGAGACAGTAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | TACTGTCTCGTTTGGTCCAGCTCTTCTCAGGGATGCTaGATGCCTTTATCTTCTTTCTCTCAGGCTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: YCLVWSSSSQGC*MPLSSFSQAVP Trigger: AGGTACAGCCTGAGAGAAAGAAGATAAAGGCATCCAGCATCCCTGAGAAGAGCTGGACCAAACGAGACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS CCA 72 bp | TCCTCTGTCTCTGACTCATCAGAAAACGCATGGCCTTaGAGCAGCTCGATCACTCTAAATTTGGCTTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSVSDSSENAWP*SSSITLNLAFS Trigger: GGAAAAAGCCAAATTTAGAGTGATCGAGCTGCTCCAAGGCCATGCGTTTTCTGATGAGTCAGAGACAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 72 bp | CTCACTCTTAAGATTCAAAAGTCCAGAATCCAGGGCTaGCCAGCTTGGAAAGTTAGGCTTACTGTCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTLKIQKSRIQG*PAWKVRLTVSF Trigger: AAACGAGACAGTAAGCCTAACTTTCCAAGCTGGTCAGCCCTGGATTCTGGACTTTTGAATCTTAAGAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||
| CDS TCA 72 bp | ATCTCTGTTCAGTTCAGTATCATTTCCTGCAGTGGTTaGGGATGTAACATCGAAGATGTAACAAGGAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISVQFSIISCSG*GCNIEDVTRSF Trigger: AAAACTCCTTGTTACATCTTCGATGTTACATCCTCAACCACTGCAGGAAATGATACTGAACTGAACAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099719.10 ENSMUST00000151743.9 |
||
| CDS TCA 72 bp | AATCTGTCCCTTCTAATTTCATTTCTAACCAGGGTCTaGTCAGAATCAGAGATTTCCCAATACATCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: NLSLLISFLTRV*SESEISQYIPI Trigger: AATGGGGATGTATTGGGAAATCTCTGATTCTGATCAGACCCTGGTTAGAAATGAAATTAGAAGGGACAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099719.10 ENSMUST00000122872.9 ENSMUST00000151743.9 |
||