Pregenerated sensors for PGAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039611Ensembl transcript IDs: ENSMUST00000042750.3, ENSMUST00000150664.2, ENSMUST00000151542.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGATTCTCTGGAGTTTGCTGCTTAGCCAGTCGAGCACAAACTGGTaGATGATGCGTTCAGTGAGGCCCCCTGTCAGCAGAGAACAACTG | + |
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Preference number: 1 (lower is better) Translates to: GILWSLLLSQSSTNW*MMRSVRPPVSREQL Trigger: CAGTTGTTCTCTGCTGACAGGGGGCCTCACTGAACGCATCATTCACCAGTTTGTGCTCGACTGGCTAAGCAGCAAACTCCAGAGAATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 90 bp | GTGTGGCTGTGTAGAGGGAGAGAGATCCAACTTGTGGCAAACTCCTaGTTCTTCTGGAGGTTTCCCAGTCAGGGCTTTTCACTCGATGCA | + |
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Preference number: 1 (lower is better) Translates to: VWLCRGREIQLVANS*FFWRFPSQGFSLDA Trigger: TGCATCGAGTGAAAAGCCCTGACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCCCTCTACACAGCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 90 bp | CTGTCACGAGCCAGAACTTGCAGACACAGAGAAGATAACTACCACTaGCTTTCATCCTCACGGAGAGAGGCAGACTGCATGAGGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LSRARTCRHREDNYH*LSSSRREADCMRQC Trigger: ACACTGCCTCATGCAGTCTGCCTCTCTCCGTGAGGATGAAAGTCAGTGGTAGTTATCTTCTCTGTGTCTGCAAGTTCTGGCTCGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 90 bp | TCCCAGTCAGGGCTTTTCACTCGATGCATTCCTCCCCTGTCCCAGTaGCTGCAACACCTAGCAACATTGACCAATGAAATATCTGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: SQSGLFTRCIPPLSQ*LQHLATLTNEISAS Trigger: GCTTGCAGATATTTCATTGGTCAATGTTGCTAGGTGTTGCAGGCACTGGGACAGGGGAGGAATGCATCGAGTGAAAAGCCCTGACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 90 bp | CTAATTCAAGTCTCGCAGCACAGTGCACAAGATTTTTGGCAGTCCTaGGCTCTGTCACGAGCCAGAACTTGCAGACACAGAGAAGATAAC | + |
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Preference number: 1 (lower is better) Translates to: LIQVSQHSAQDFWQS*ALSRARTCRHREDN Trigger: GTTATCTTCTCTGTGTCTGCAAGTTCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGACTTGAATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 90 bp | GAAGCTTCAGGTCACAAATGTAGGGAGAAGGCTACGCTCCTAGTATaGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: EASGHKCREKATLLV*RSFFCLLLKYPPAK Trigger: CTTGGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGGAGCGTAGCCTTCTCCCTACATTTGTGACCTGAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 90 bp | TCCTCCCCTGTCCCAGTGCCTGCAACACCTAGCAACATTGACCAATaGAATATCTGCAAGCAACCACATCTAAATAAAGAATCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SSPVPVPATPSNIDQ*NICKQPHLNKESSV Trigger: CACACTGGATTCTTTATTTAGATGTGGTTGCTTGCAGATATTTCATTGGTCAATGTTGCTAGGTGTTGCAGGCACTGGGACAGGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 90 bp | GAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGACTTaGGTTATTCAGAAAGCGCACGGAGATTCTGCTGTGCTTAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: EMFCISCVFNRSNPT*VIQKAHGDSAVLKA Trigger: GGCTTTAAGCACAGCAGAATCTCCGTGCGCTTTCTGAATAACCCAAGTCGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 90 bp | CCTAGTATGGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCACCTaGCAAGGAATCACACTATCACAGAAATGTTCTGCATTAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PSMEVILLSPSEIST*QGITLSQKCSALAV Trigger: CACAGCTAATGCAGAACATTTCTGTGATAGTGTGATTCCTTGGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 90 bp | ATTAGAAACCACAATGAAAAACCAGTCACTGTTTTTAGCAGTGGTTaGGCTCAAACAGCTACTATTCAGTTGAAAGCCACACGCCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: IRNHNEKPVTVFSSG*AQTATIQLKATRPK Trigger: CTTAGGGCGTGTGGCTTTCAACTGAATAGTAGCTGTTTGAGCCCAACCACTGCTAAAAACAGTGACTGGTTTTTCATTGTGGTTTCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 90 bp | AAGAGCCAGATCACCACCTCCAAGACAACTGACACAGAACAACTTTaGCACTTTTATTACACCAGGCCAAGGAAAACAAATAGAATATGG | + |
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Preference number: 1 (lower is better) Translates to: KSQITTSKTTDTEQL*HFYYTRPRKTNRIW Trigger: CCATATTCTATTTGTTTTCCTTGGCCTGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGATCTGGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGAGCTTGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCTGCAACCGTAACTCCTGCTTCTTCTaGAGGTTTCCCAGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GSELVPQQAGRVPHICNRNSCFF*RFPSQG Trigger: GCCCTGACTGGGAAACCTCCAGAAGAAGCAGGAGTT...ACGGTTGCAGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGCACAAGATTTTTGGCAGTCCTGGGCTCTGTCACGAGCCAGAACTTGCACCTCCCCTGTCCCAGTaGCTGCAACACCTAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: TVHKIFGSPGLCHEPELAPPLSQ*LQHLAT Trigger: TGTTGCTAGGTGTTGCAGGCACTGGGACAGGGGAGG...TGCAAGTTCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAGTGCCACATATCTGCAACCGTGTAGCAGGGAAGCGGAGGCAGGGGATTTCCCAGGCCATACTTaGTCTTCTATGCTACACTGT | + |
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Preference number: 2 (lower is better) Translates to: RQSATYLQPCSREAEAGDFPGHT*SSMLHC Trigger: ACAGTGTAGCATAGAAGACCAAGTATGGCCTGGGAA...ATCCCCTGCCTCCGCTTCCCTGCTACACGGTTGCAGATATGTGGCACTCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR TCA 90 bp | GGATCTGAGCTTGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCTGCAACCGTGAAGATAACTACCACTaGCTTTCATCCTCACGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GSELVPQQAGRVPHICNREDNYH*LSSSRR Trigger: TCTCCGTGAGGATGAAAGTCAGTGGTAGTTATCTTC...ACGGTTGCAGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGAATGATGCGTTCAGTGAGGCCCCCTGTCAGCAGAGAACAACTGAGAAAGATTTTTGGCAGTCCTaGGCTCTGTCACGAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LVNDAFSEAPCQQRTTEKDFWQS*ALSRAR Trigger: TCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATC...TTTCTCAGTTGTTCTCTGCTGACAGGGGGCCTCACTGAACGCATCATTCACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CAA 90 bp | GGCCAAGGAAAACAAATAGAATATGGCAACATGGTCCTGCCTTCTTaGGGCATAGATTCTCAGCACACATCCGCTCTTGAACCGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GQGKQIEYGNMVLPS*GIDSQHTSALEPWE Trigger: TTCCCACGGTTCAAGAGCGGATGTGTGCTGAGAATCTATGCCCAAAGAAGGCAGGACCATGTTGCCATATTCTATTTGTTTTCCTTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGAATGATGCGTTCAGTGAGGCCCCCTGTCAGCAGAGAACAACTGAGAAATTGTTCAAAAGCGTCTaGCTGTTCACCATACTCTAC | + |
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Preference number: 2 (lower is better) Translates to: LVNDAFSEAPCQQRTTEKLFKSV*LFTILY Trigger: GTAGAGTATGGTGAACAGTCAGACGCTTTTGAACAA...TTTCTCAGTTGTTCTCTGCTGACAGGGGGCCTCACTGAACGCATCATTCACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR TCA 90 bp | ACGCTCCTAGTATGGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCGACACAGAACAACTTTaGCACTTTTATTACACCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLLVWRSFFCLLLKYPPADTEQL*HFYYTR Trigger: CCTGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTC...GGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGGAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR GCA 90 bp | TCACCACCTCCAAGACAACTGACACAGAACAACTTTGACACTTTTATTACACCACTTGTGGCAAACTCCTaGTTCTTCTGGAGGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPPPRQLTQNNFDTFITPLVANS*FFWRFP Trigger: GGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAG...TGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CCA 90 bp | CACACTATCACAGAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGAGTGCACAAGATTTTTaGCAGTCCTGGGCTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: HTITEMFCISCVFNRSNPSAQDF*QSWALS Trigger: TGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACT...CGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR GCA 90 bp | ATAATTAGAAACCACAATGAAAAACCAGTCACTGTTTTTAGCAGTGGTTGGGCTAGAGTGCCACATATCTaGAACCGTGTAGCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IIRNHNEKPVTVFSSGWARVPHI*NRVAGK Trigger: CTTCCCTGCTACACGGTTGCAGATATGTGGCACTCT...AGCCCAACCACTGCTAAAAACAGTGACTGGTTTTTCATTGTGGTTTCTAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CCA 90 bp | TCACCACCTCCAAGACAACTGACACAGAACAACTTTGACACTTTTATTACACCAGAGAGATCCAACTTGTaGCAAACTCCTGCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SPPPRQLTQNNFDTFITPERSNL*QTPASS Trigger: AGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTC...TGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR GCA 90 bp | CACACTATCACAGAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGACGGAGATTCTGCTGTaGTTAAAGCCTTCATCCATA | + |
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Preference number: 2 (lower is better) Translates to: HTITEMFCISCVFNRSNPTEILL*LKPSSI Trigger: TATGGATGAAGGCTTTAAGCACAGCAGAATCTCCGT...CGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 72 bp | CTTCTGGAGGTTTCCCAGTCAGGGCTTTTCACTCGATaGATTCCTCCCCTGTCCCAGTGCCTGCAACACCTA | + |
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Preference number: 3 (lower is better) Translates to: LLEVSQSGLFTR*IPPLSQCLQHL Trigger: TAGGTGTTGCAGGCACTGGGACAGGGGAGGAATGCATCGAGTGAAAAGCCCTGACTGGGAAACCTCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | GTCTCGCAGCACAGTGCACAAGATTTTTGGCAGTCCTaGGCTCTGTCACGAGCCAGAACTTGCAGACACAGA | + |
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Preference number: 3 (lower is better) Translates to: VSQHSAQDFWQS*ALSRARTCRHR Trigger: TCTGTGTCTGCAAGTTCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | CAGTGTGGCTGTGTAGAGGGAGAGAGATCCAACTTGTaGCAAACTCCTGCTTCTTCTGGAGGTTTCCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QCGCVEGERSNL*QTPASSGGFPV Trigger: GACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCCCTCTACACAGCCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | CTAATTCAAGTCTCGCAGCACAGTGCACAAGATTTTTaGCAGTCCTGGGCTCTGTCACGAGCCAGAACTTGC | + |
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Preference number: 3 (lower is better) Translates to: LIQVSQHSAQDF*QSWALSRARTC Trigger: GCAAGTTCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGACTTGAATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 72 bp | GGGCTTTTCACTCGATGCATTCCTCCCCTGTCCCAGTaGCTGCAACACCTAGCAACATTGACCAATGAAATA | + |
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Preference number: 3 (lower is better) Translates to: GLFTRCIPPLSQ*LQHLATLTNEI Trigger: TATTTCATTGGTCAATGTTGCTAGGTGTTGCAGGCACTGGGACAGGGGAGGAATGCATCGAGTGAAAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 72 bp | TGTAGAGGGAGAGAGATCCAACTTGTGGCAAACTCCTaGTTCTTCTGGAGGTTTCCCAGTCAGGGCTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: CRGREIQLVANS*FFWRFPSQGFS Trigger: TGAAAAGCCCTGACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCCCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | AGAGAGATCCAACTTGTGGCAAACTCCTGCTTCTTCTaGAGGTTTCCCAGTCAGGGCTTTTCACTCGATGCA | + |
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Preference number: 3 (lower is better) Translates to: REIQLVANSCFF*RFPSQGFSLDA Trigger: TGCATCGAGTGAAAAGCCCTGACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAATTCAAGTCTCGCAGCACAGTGCACAAGATTTTTGGCAGTCCTGGGCTCTCAACACCTAGCAACATaGACCAATGAAATATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PNSSLAAQCTRFLAVLGSQHLAT*TNEISA Trigger: TGCAGATATTTCATTGGTCAATGTTGCTAGGTGTTG...AGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGACTTGAATTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | TGCATTAGCTGTGTATTTAACAGAAGCAACCCGACTTaGGTTATTCAGAAAGCGCACGGAGATTCTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: CISCVFNRSNPT*VIQKAHGDSAV Trigger: CACAGCAGAATCTCCGTGCGCTTTCTGAATAACCCAAGTCGGGTTGCTTCTGTTAAATACACAGCTAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | GGTCACAAATGTAGGGAGAAGGCTACGCTCCTAGTATaGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCA | + |
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Preference number: 3 (lower is better) Translates to: GHKCREKATLLV*RSFFCLLLKYP Trigger: TGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGGAGCGTAGCCTTCTCCCTACATTTGTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 72 bp | ATCTCAGAAGAGCCAGATCACCACCTCCAAGACAACTaGCACAGAACAACTTTGACACTTTTATTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: ISEEPDHHLQDN*HRTTLTLLLHQ Trigger: CTGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGATCTGGCTCTTCTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 72 bp | CTTGGGTTATTCAGAAAGCGCACGGAGATTCTGCTGTaGTTAAAGCCTTCATCCATAGCATTTACTCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: LGLFRKRTEILL*LKPSSIAFTLN Trigger: ATTCAGAGTAAATGCTATGGATGAAGGCTTTAAGCACAGCAGAATCTCCGTGCGCTTTCTGAATAACCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR GCA 72 bp | CACCTGCCAAGGAATCACACTATCACAGAAATGTTCTaGATTAGCTGTGTATTTAACAGAAGCAACCCGACT | + |
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Preference number: 3 (lower is better) Translates to: HLPRNHTITEMF*ISCVFNRSNPT Trigger: AGTCGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTGATTCCTTGGCAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 72 bp | GTCCCAGTGCCTGCAACACCTAGCAACATTGACCAATaGAATATCTGCAAGCAACCACATCTAAATAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: VPVPATPSNIDQ*NICKQPHLNKE Trigger: TTCTTTATTTAGATGTGGTTGCTTGCAGATATTTCATTGGTCAATGTTGCTAGGTGTTGCAGGCACTGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CCA 72 bp | CACAATGAAAAACCAGTCACTGTTTTTAGCAGTGGTTaGGCTCAAACAGCTACTATTCAGTTGAAAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: HNEKPVTVFSSG*AQTATIQLKAT Trigger: TGTGGCTTTCAACTGAATAGTAGCTGTTTGAGCCCAACCACTGCTAAAAACAGTGACTGGTTTTTCATTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR TCA 72 bp | ATCACCACCTCCAAGACAACTGACACAGAACAACTTTaGCACTTTTATTACACCAGGCCAAGGAAAACAAAT | + |
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Preference number: 3 (lower is better) Translates to: ITTSKTTDTEQL*HFYYTRPRKTN Trigger: ATTTGTTTTCCTTGGCCTGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGTGCCACATATCTGCAACCGTGTAGCAGGGAAGCGGAGGCAGGGGATGCCGGGGTACAACACTaGGAGGCAGGAACCACACTG | + |
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Preference number: 4 (lower is better) Translates to: RQSATYLQPCSREAEAGDAGVQH*EAGTTL Trigger: CAGTGTGGTTCCTGCCTCTCAGTGTTGTACCCCGGC...ATCCCCTGCCTCCGCTTCCCTGCTACACGGTTGCAGATATGTGGCACTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGTTGATACAGTGCGTGCCACAGAAGGGTGAGGATCTGAGCTTGTTCCCCCACAGGAAGAGCTGGTaGCCTTCACACTGGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AQLIQCVPQKGEDLSLFPHRKSW*PSHWGP Trigger: CGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTG...GGGGAACAAGCTCAGATCCTCACCCTTCTGTGGCACGCACTGTATCAACTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR CCA 90 bp | GGATCTGAGCTTGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCTGCAACCGTGCCTCCGGAGAAGCATaGCAGCTGGAGAGGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: GSELVPQQAGRVPHICNRASGEA*QLERLT Trigger: CGTCAACCTCTCCAGCTGCCATGCTTCTCCGGAGGC...ACGGTTGCAGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGCGGAGGCAGGGGATTCTCTGGAGTTTGCTGCTTAGCCAGTCGAGCTGGGCACAGACCCATTaGCAGAGGGCAGCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: AGKRRQGILWSLLLSQSSWAQTH*QRAALQ Trigger: TTGAAGAGCTGCCCTCTGCCAATGGGTCTGTGCCCA...GCTCGACTGGCTAAGCAGCAAACTCCAGAGAATCCCCTGCCTCCGCTTCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR GCA 90 bp | TGCATTCCTCCCCTGTCCCAGTGCCTGCAACACCTAGCAACATTGACCAATGAACAGGCCCCAGCAGCATaGCCACACCAACCCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: CIPPLSQCLQHLATLTNEQAPAA*PHQPTP Trigger: TGGAGTGGGTTGGTGTGGGCATGCTGCTGGGGCCTG...TTCATTGGTCAATGTTGCTAGGTGTTGCAGGCACTGGGACAGGGGAGGAATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR CCA 90 bp | ACAGTGCACAAGATTTTTGGCAGTCCTGGGCTCTGTCACGAGCCAGAACTTGCATGGCCTGCCAGACGATaGGCACAGACCCATTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVHKIFGSPGLCHEPELAWPARR*AQTHWQ Trigger: CTGCCAATGGGTCTGTGCCCATCGTCTGGCAGGCCA...TGCAAGTTCTGGCTCGTGACAGAGCCCAGGACTGCCAAAAATCTTGTGCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTGGAGGTTTCCCAGTCAGGGCTTTTCACTCGATGCATTCCTCCCCTGTTGCACAGGAAGAGCTaGTGCCCTTCACACTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLLEVSQSGLFTRCIPPLLHRKS*CPSHWG Trigger: CCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAA...CAGGGGAGGAATGCATCGAGTGAAAAGCCCTGACTGGGAAACCTCCAGAAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
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| 3UTR CAA 72 bp | ATACAGTGCGTGCCACAGAAGGGTGAGGATCTGAGCTaGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCT | + |
|
Preference number: 4 (lower is better) Translates to: IQCVPQKGEDLS*FPSRQAECHIS Trigger: AGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCCTCACCCTTCTGTGGCACGCACTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | TCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCAAGGAATCACACTATCACGCCAGGGGCGGGGAGTaGCCTGCCAGACGATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFFCLLLKYPPAKESHYHARGGE*PARRWA Trigger: TGCCCATCGTCTGGCAGGCCACTCCCCGCCCCTGGC...GTGATAGTGTGATTCCTTGGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR TCA 90 bp | GGATCTGAGCTTGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCTGCAACCGTGTAGGTTTGCAGCGATaGCTCCAGGCAATACACATA | + |
|
Preference number: 4 (lower is better) Translates to: GSELVPQQAGRVPHICNRVGLQR*LQAIHI Trigger: TATGTGTATTGCCTGGAGTCATCGCTGCAAACCTAC...ACGGTTGCAGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGATCCAACTTGTGGCAAACTCCTGCTTCTTCTGGAGGTTTCCCAGTCTCCTTCAGGCTCTGCTaGAGGAAGTCCTGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GERSNLWQTPASSGGFPVSFRLC*RKSWLI Trigger: GATGAGCCAGGACTTCCTGCAGCAGAGCCTGAAGGA...GACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | CCTAATTCAAGTCTCGCAGCACAGTGCACAAGATTTTTGGCAGTCCTGGGCTCTAGGCCCTCTCCCCCTTaGCTCTCAGCAGAGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PNSSLAAQCTRFLAVLGSRPSPP*LSAEST Trigger: TGTACTCTCTGCTGAGAGCCAAGGGGGAGAGGGCCT...AGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGACTTGAATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGATCCAACTTGTGGCAAACTCCTGCTTCTTCTGGAGGTTTCCCAGTCTCACCACGGTTAGAATaGAGAGCTGCACAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GERSNLWQTPASSGGFPVSPRLE*RAAQLC Trigger: GCACAGCTGTGCAGCTCTTCATTCTAACCGTGGTGA...GACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR TCA 90 bp | CACACTATCACAGAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGCCTGGGACAGGTAGGTaGGGGTCCTGCGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTITEMFCISCVFNRSNPPGTGR*GSCGQQ Trigger: CTGCTGCCCGCAGGACCCTCACCTACCTGTCCCAGG...CGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGATCCAACTTGTGGCAAACTCCTGCTTCTTCTGGAGGTTTCCCAGTCGTTAGAATGAAGAGCTaGACAGCTGTGCTGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GERSNLWQTPASSGGFPVVRMKS*TAVLPQ Trigger: CTGGGGCAGCACAGCTGTGCAGCTCTTCATTCTAAC...GACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | GGATCTGAGCTTGTTCCCCAGCAGGCAGGCAGAGTGCCACATATCTGCAACCGTAATTGTACCGTAGGCTaGAGAAGAGCCCAATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSELVPQQAGRVPHICNRNCTVG*RRAQCV Trigger: AACACATTGGGCTCTTCTCCAGCCTACGGTACAATT...ACGGTTGCAGATATGTGGCACTCTGCCTGCCTGCTGGGGAACAAGCTCAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | TCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCAAGGAATCACACTATCACCACTGGGGGCCGCACTaGTGCAGAAGCCGATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFFCLLLKYPPAKESHYHHWGPH*CRSRWN Trigger: GTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTG...GTGATAGTGTGATTCCTTGGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGATCCAACTTGTGGCAAACTCCTGCTTCTTCTGGAGGTTTCCCAGTCTGCTGCAGGAAGTCCTaGCTCATCTGGTTTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GERSNLWQTPASSGGFPVCCRKS*LIWFRC Trigger: GCATCTAAACCAGATGAGCCAGGACTTCCTGCAGCA...GACTGGGAAACCTCCAGAAGAAGCAGGAGTTTGCCACAAGTTGGATCTCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAATCCAGTGTGTGCCTCTCCCAGAGAAATAGCTAATAGCAGAAAAGCAAGAGCTGCACAGCTGTaGTGCCCCAGGAGAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKNPVCASPREIANSRKARAAQL*CPRRVA Trigger: GGCGACTCTCCTGGGGCAGCACAGCTGTGCAGCTCT...TGCTTTTCTGCTATTAGCTATTTCTCTGGGAGAGGCACACACTGGATTCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | ACGCTCCTAGTATGGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCGTTCCACCAGCCCCATaGTGTAGAGACAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLVWRSFFCLLLKYPPAVPPAP*CRDRRK Trigger: TTTTCTTCTGTCTCTACAGCATGGGGCTGGTGGAAC...GGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGGAGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | ACGCTCCTAGTATGGAGGTCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCGAGGTGCTCCAATACTaGGAAGATCTGTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLVWRSFFCLLLKYPPAEVLQY*EDLFFW Trigger: CCAGAAGAACAGATCTTCCCAGTATTGGAGCACCTC...GGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGACCTCCATACTAGGAGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | CACACTATCACAGAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGCGAGCACGCAGGAGGTaGTCCAATACTGGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HTITEMFCISCVFNRSNPRARRR*SNTGKI Trigger: GATCTTCCCAGTATTGGAGCACCTCCTGCGTGCTCG...CGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | CCTAATTCAAGTCTCGCAGCACAGTGCACAAGATTTTTGGCAGTCCTGGGCTCTGAAGATCTGTTCTTCTaGAATAGCATCATCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNSSLAAQCTRFLAVLGSEDLFF*NSIILH Trigger: GTGGAGGATGATGCTATTCCAGAAGAACAGATCTTC...AGAGCCCAGGACTGCCAAAAATCTTGTGCACTGTGCTGCGAGACTTGAATTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | CACACTATCACAGAAATGTTCTGCATTAGCTGTGTATTTAACAGAAGCAACCCGTTGCCAAAGCCCTTGTaGCAGTACACCTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTITEMFCISCVFNRSNPLPKPL*QYTWDR Trigger: CCTGTCCCAGGTGTACTGCCACAAGGGCTTTGGCAA...CGGGTTGCTTCTGTTAAATACACAGCTAATGCAGAACATTTCTGTGATAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CCA 90 bp | TCACCACCTCCAAGACAACTGACACAGAACAACTTTGACACTTTTATTACACCAAGATACAGGGCATCTTaGAGGTGTGGCTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPPRQLTQNNFDTFITPRYRAS*RCGSEK Trigger: CTTCTCTGAGCCACACCTCCAAGATGCCCTGTATCT...TGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | CAGTTGAAAGCCACACGCCCTAAGTCCCCATTAAACACAAATATCTTACTAAAACAGCAGAGAGTACAGTaGCATGTCTTTGCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLKATRPKSPLNTNILLKQQRVQ*HVFAKA Trigger: GGCTTTGGCAAAGACATGGCACTGTACTCTCTGCTG...TTTTAGTAAGATATTTGTGTTTAATGGGGACTTAGGGCGTGTGGCTTTCAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| 3UTR CAA 72 bp | AAACAAATAGAATATGGCAACATGGTCCTGCCTTCTTaGGGCATAGATTCTCAGCACACATCCGCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQIEYGNMVLPS*GIDSQHTSALE Trigger: TTCAAGAGCGGATGTGTGCTGAGAATCTATGCCCAAAGAAGGCAGGACCATGTTGCCATATTCTATTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR TCA 90 bp | TCATTCTTCTGTCTCCTTCTGAAATATCCACCTGCCAAGGAATCACACTATCACCTTCTCTTTCTCAAATaGGTTAGTGGAAGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFFCLLLKYPPAKESHYHLLFLK*VSGRVI Trigger: GATGACCCTTCCACTAACTCATTTGAGAAAGAGAAG...GTGATAGTGTGATTCCTTGGCAGGTGGATATTTCAGAAGGAGACAGAAGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR GCA 90 bp | ATAATTAGAAACCACAATGAAAAACCAGTCACTGTTTTTAGCAGTGGTTGGGCTACAGTGCCATGTCTTTaGCAAAGCCCTTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IIRNHNEKPVTVFSSGWATVPCL*QSPCGS Trigger: ACTGCCACAAGGGCTTTGGCAAAGACATGGCACTGT...AGCCCAACCACTGCTAAAAACAGTGACTGGTTTTTCATTGTGGTTTCTAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS TCA 90 bp | CTGCGGGCAGCAGGGGCAGGGAAGAGCATAGCCGGGGTACAACACTaGGAGGCAGGAACCACACTGTACAAGGAGGGACTCAGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRAAGAGKSIAGVQH*EAGTTLYKEGLRRR Trigger: GCGGCGCCTGAGTCCCTCCTTGTACAGTGTGGTTCCTGCCTCTCAGTGTTGTACCCCGGCTATGCTCTTCCCTGCCCCTGCTGCCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 90 bp | AGCGGGGCCAGTAAGCCAAATGTCACCACGGTTAGAATGAAGAGCTaGACAGCTGTGCTGCCCCAGGAGAGTCGCCGAAGCCTCCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGASKPNVTTVRMKS*TAVLPQESRRSLRR Trigger: TCTCCGGAGGCTTCGGCGACTCTCCTGGGGCAGCACAGCTGTGCAGCTCTTCATTCTAACCGTGGTGACATTTGGCTTACTGGCCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042750.3 ENSMUST00000150664.2 |
||
| CDS GCA 90 bp | TCCACAGTGATTATGGTAATCACCAGCCAGGGGCGGGGAGTGGCCTaGCAGACGATGGGCACAGACCCATTGGCAGAGGGCAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STVIMVITSQGRGVA*QTMGTDPLAEGSSS Trigger: TGAAGAGCTGCCCTCTGCCAATGGGTCTGTGCCCATCGTCTGGCAGGCCACTCCCCGCCCCTGGCTGGTGATTACCATAATCACTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042750.3 ENSMUST00000150664.2 |
||
| CDS CCA 90 bp | ACACTCCGTTCCACATTGCACAGGAAGAGCTGGTGCCCTTCACACTaGGGGCCGCACTGCTGCAGAAGCCGATGGAACTGGGATACTACC | + |
|
Preference number: 5 (lower is better) Translates to: TLRSTLHRKSWCPSH*GPHCCRSRWNWDTT Trigger: GGTAGTATCCCAGTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 90 bp | GCATCAAAATGGCTCACACTCCGTTCCACATTGCACAGGAAGAGCTaGTGCCCTTCACACTGGGGGCCGCACTGCTGCAGAAGCCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: ASKWLTLRSTLHRKS*CPSHWGPHCCRSRW Trigger: CCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGTGAGCCATTTTGATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 90 bp | TCAAAATGGCTCACACTCCGTTCCACATTGCACAGGAAGAGCTGGTaGCCTTCACACTGGGGGCCGCACTGCTGCAGAAGCCGATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKWLTLRSTLHRKSW*PSHWGPHCCRSRWN Trigger: GTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGTGAGCCATTTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 90 bp | CGGTTGGCCACAGGGACGTACTTAGAGAGCAGCTTAGCATCAAAATaGCTCACACTCCGTTCCACATTGCACAGGAAGAGCTGGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLATGTYLESSLASK*LTLRSTLHRKSWCP Trigger: AGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGTGAGCCATTTTGATGCTAAGCTGCTCTCTAAGTACGTCCCTGTGGCCAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 90 bp | AGGGCATCTTGGAGGTGTGGCTCAGAGAAGCGAGCACGCAGGAGGTaGTCCAATACTGGGAAGATCTGTTCTTCTGGAATAGCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RASWRCGSEKRARRR*SNTGKICSSGIASS Trigger: GGATGATGCTATTCCAGAAGAACAGATCTTCCCAGTATTGGAGCACCTCCTGCGTGCTCGCTTCTCTGAGCCACACCTCCAAGATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 90 bp | GAGGTGTGGCTCAGAGAAGCGAGCACGCAGGAGGTGCTCCAATACTaGGAAGATCTGTTCTTCTGGAATAGCATCATCCTCCACCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVWLREASTQEVLQY*EDLFFWNSIILHHQ Trigger: CTGATGGTGGAGGATGATGCTATTCCAGAAGAACAGATCTTCCCAGTATTGGAGCACCTCCTGCGTGCTCGCTTCTCTGAGCCACACCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCAAGGAAAACAAATAGAATATGGCAACATGGTCCTGCCTTCTTTGGGCATGGGCACAGACCCATaGGCAGAGGGCAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGQGKQIEYGNMVLPSLGMGTDP*AEGSSS Trigger: TGAAGAGCTGCCCTCTGCCAATGGGTCTGTGCCCAT...GCCCAAAGAAGGCAGGACCATGTTGCCATATTCTATTTGTTTTCCTTGGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCAAGGAAAACAAATAGAATATGGCAACATGGTCCTGCCTTCTTTGGGCACACTCCGTTCCACATaGCACAGGAAGAGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGQGKQIEYGNMVLPSLGTLRST*HRKSWC Trigger: GCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGT...GCCCAAAGAAGGCAGGACCATGTTGCCATATTCTATTTGTTTTCCTTGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAATCCAGTGTGTGCCTCTCCCAGAGAAATAGCTAATAGCAGAAAAGCATCTTTGCCAAAGCCCTaGTGGCAGTACACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKNPVCASPREIANSRKASLPKP*WQYTWD Trigger: GTCCCAGGTGTACTGCCACAAGGGCTTTGGCAAAGA...TGCTTTTCTGCTATTAGCTATTTCTCTGGGAGAGGCACACACTGGATTCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS-3UTR CAA 90 bp | TCACCACCTCCAAGACAACTGACACAGAACAACTTTGACACTTTTATTACACCATACAGTGCCATGTCTTaGCCAAAGCCCTTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPPRQLTQNNFDTFITPYSAMS*PKPLWQ Trigger: CTGCCACAAGGGCTTTGGCAAAGACATGGCACTGTA...TGGTGTAATAAAAGTGTCAAAGTTGTTCTGTGTCAGTTGTCTTGGAGGTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 72 bp | CTCACACTCCGTTCCACATTGCACAGGAAGAGCTGGTaGCCTTCACACTGGGGGCCGCACTGCTGCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLRSTLHRKSW*PSHWGPHCCRS Trigger: GCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 72 bp | TCCACATTGCACAGGAAGAGCTGGTGCCCTTCACACTaGGGGCCGCACTGCTGCAGAAGCCGATGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: STLHRKSWCPSH*GPHCCRSRWNW Trigger: CCAGTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 72 bp | TGGCTCACACTCCGTTCCACATTGCACAGGAAGAGCTaGTGCCCTTCACACTGGGGGCCGCACTGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WLTLRSTLHRKS*CPSHWGPHCCR Trigger: TCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCTGTGCAATGTGGAACGGAGTGTGAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS TCA 72 bp | GCAGGGGCAGGGAAGAGCATAGCCGGGGTACAACACTaGGAGGCAGGAACCACACTGTACAAGGAGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: AGAGKSIAGVQH*EAGTTLYKEGL Trigger: GAGTCCCTCCTTGTACAGTGTGGTTCCTGCCTCTCAGTGTTGTACCCCGGCTATGCTCTTCCCTGCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 72 bp | AGGAAGAGCTGGTGCCCTTCACACTGGGGGCCGCACTaGTGCAGAAGCCGATGGAACTGGGATACTACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKSWCPSHWGPH*CRSRWNWDTTC Trigger: ACAGGTAGTATCCCAGTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 72 bp | AAGAGCTGGTGCCCTTCACACTGGGGGCCGCACTGCTaGAGAAGCCGATGGAACTGGGATACTACCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSWCPSHWGPHC*RSRWNWDTTCK Trigger: CTTACAGGTAGTATCCCAGTTCCATCGGCTTCTGCAGCAGTGCGGCCCCCAGTGTGAAGGGCACCAGCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 72 bp | GTAGGCTGGAGAAGAGCCCAATGTGTTTCACAAGGTTaGGCTCCACCACATAGGCCCTCTCCCCCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGWRRAQCVSQG*APPHRPSPPWL Trigger: GAGCCAAGGGGGAGAGGGCCTATGTGGTGGAGCCCAACCTTGTGAAACACATTGGGCTCTTCTCCAGCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS GCA 72 bp | AGTAAGCCAAATGTCACCACGGTTAGAATGAAGAGCTaGACAGCTGTGCTGCCCCAGGAGAGTCGCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKPNVTTVRMKS*TAVLPQESRRS Trigger: GCTTCGGCGACTCTCCTGGGGCAGCACAGCTGTGCAGCTCTTCATTCTAACCGTGGTGACATTTGGCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042750.3 ENSMUST00000150664.2 ENSMUST00000151542.2 |
||
| CDS GCA 72 bp | CCTTGGCTCTCAGCAGAGAGTACAGTGCCATGTCTTTaGCAAAGCCCTTGTGGCAGTACACCTGGGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWLSAESTVPCL*QSPCGSTPGTG Trigger: ACCTGTCCCAGGTGTACTGCCACAAGGGCTTTGGCAAAGACATGGCACTGTACTCTCTGCTGAGAGCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 72 bp | CTCAGAGAAGCGAGCACGCAGGAGGTGCTCCAATACTaGGAAGATCTGTTCTTCTGGAATAGCATCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LREASTQEVLQY*EDLFFWNSIIL Trigger: GAGGATGATGCTATTCCAGAAGAACAGATCTTCCCAGTATTGGAGCACCTCCTGCGTGCTCGCTTCTCTGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS CCA 72 bp | ACAGGGACGTACTTAGAGAGCAGCTTAGCATCAAAATaGCTCACACTCCGTTCCACATTGCACAGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGTYLESSLASK*LTLRSTLHRKS Trigger: GCTCTTCCTGTGCAATGTGGAACGGAGTGTGAGCCATTTTGATGCTAAGCTGCTCTCTAAGTACGTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||
| CDS TCA 72 bp | CATCAGGACATAGTCTGGATTGTAGGTTTGCAGCGATaGCTCCAGGCAATACACATAGTCTTGCTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HQDIVWIVGLQR*LQAIHIVLLLF Trigger: AAAGAGAAGCAAGACTATGTGTATTGCCTGGAGTCATCGCTGCAAACCTACAATCCAGACTATGTCCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042750.3 |
||