Pregenerated sensors for PGAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038208Ensembl transcript IDs: ENSMUST00000090827.12, ENSMUST00000128897.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCTGCCCCCTGAACTGCAGTACACTCTAAGTGAAGACCCACAGTaGCCCAGCTCACTGGCCACATGGTCATCTCTGCCCCTGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ALPPELQYTLSEDPQ*PSSLATWSSLPLAW Trigger: CCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTGTGGGTCTTCACTTAGAGTGTACTGCAGTTCAGGGGGCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 90 bp | CAGGGTAGAAACCCCTCCTACCCAAGGAGCCCGGTTCCTCAGAGCTaGAGAGAAACCTGGGCAGCTGAGAAGCAAGCATCCAGCGCCACC | + |
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Preference number: 1 (lower is better) Translates to: QGRNPSYPRSPVPQS*RETWAAEKQASSAT Trigger: GGTGGCGCTGGATGCTTGCTTCTCAGCTGCCCAGGTTTCTCTCCAGCTCTGAGGAACCGGGCTCCTTGGGTAGGAGGGGTTTCTACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 90 bp | TGCCCTGGGATTGGCCGGGGAGAGTCCAGCTCTGACAAAGGGAACTaGGTGGGAGGTCCACCATCCCAAGATAAAGAACCAGGGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CPGIGRGESSSDKGN*VGGPPSQDKEPGGR Trigger: CCTGCCCCCTGGTTCTTTATCTTGGGATGGTGGACCTCCCACTCAGTTCCCTTTGTCAGAGCTGGACTCTCCCCGGCCAATCCCAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 90 bp | CCTGGGCAGCTGAGAAGCAAGCATCCAGCGCCACCTAGTGTGCCCTaGCAAAAAGAGATCCCAACGAACCCCAAAGGCCTGTGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PGQLRSKHPAPPSVP*QKEIPTNPKGLWVW Trigger: CCACACCCACAGGCCTTTGGGGTTCGTTGGGATCTCTTTTTGTCAGGGCACACTAGGTGGCGCTGGATGCTTGCTTCTCAGCTGCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 90 bp | GCCCTCTATGTGTCAATGTGTCCACTCCCAGTCAGAACAGCAGACTaGGTTCTGATCCTGAGCTTCCCGGGGTCCTGGCTGGGTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ALYVSMCPLPVRTAD*VLILSFPGSWLGCG Trigger: CCCACAACCCAGCCAGGACCCCGGGAAGCTCAGGATCAGAACCCAGTCTGCTGTTCTGACTGGGAGTGGACACATTGACACATAGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 90 bp | CAGTGCCCCAGCTCACTGGCCACATGGTCATCTCTGCCCCTGGCTTaGCCCATAGCCCTCTATGTGTCAATGTGTCCACTCCCAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QCPSSLATWSSLPLA*PIALYVSMCPLPVR Trigger: TCTGACTGGGAGTGGACACATTGACACATAGAGGGCTATGGGCCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 90 bp | TACACTCTAAGTGAAGACCCACAGTGCCCCAGCTCACTGGCCACATaGTCATCTCTGCCCCTGGCTTGGCCCATAGCCCTCTATGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: YTLSEDPQCPSSLAT*SSLPLAWPIALYVS Trigger: TGACACATAGAGGGCTATGGGCCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTGTGGGTCTTCACTTAGAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCAAGACAGGTTCCATGTaGAGGCCAGCAAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AQPPDSCLVPAPDVGRPPKTGSM*RPARAR Trigger: CCTGGCCCTTGCTGGCCTTCACATGGAACCTGTCTT...GGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGTGCAAAGGGGGCACTGGGTGGGCACCCACACTCCCACCCAGCATCCCAAAGACAGGTTCCATGTaGAGGCCAGCAAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VECKGGTGWAPTLPPSIPKTGSM*RPARAR Trigger: CCTGGCCCTTGCTGGCCTTCACATGGAACCTGTCTT...TGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGTGCCCCCTTTGCACTCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGGGGCACTGGGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTAATCCTAGCAGCTGGATaGCCTTGGGGCCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AKGALGGHPHSHPASQSLILAAG*PWGLGQ Trigger: CTGCCCCAGGCCCCAAGGCCATCCAGCTGCTAGGAT...TAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGTGCCCCCTTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGGGGGCACTGGGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTAACCACCTCAGCGCCCTaGCCCCTGAACTGCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: AKGALGGHPHSHPASQSLTTSAP*PLNCST Trigger: TGTACTGCAGTTCAGGGGGCAGGGCGCTGAGGTGGT...TAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGTGCCCCCTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGTGCAAAGGGGGCACTGGGTGGGCACCCACACTCCCACCCAGCATCCCACCCTCCTCCTCTCTGTaGACCTCTAAACTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VECKGGTGWAPTLPPSIPPSSSL*TSKLGL Trigger: GAGACCAAGTTTAGAGGTTCACAGAGAGGAGGAGGG...TGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGTGCCCCCTTTGCACTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCCAGCTGCCTAGTCCCTaGCCCAGATGTGGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VSDVEREGLGNIDAALLLQLPSP*PRCGEA Trigger: GGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTG...GAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCATGTGTATATCCTAGCAGCTGGATGGCCTTGGGGCCTGGGGCAGACTTGTCCCGGGGTCCTGGCTaGGTTGTGGGAGGCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: RSCVYPSSWMALGPGADLSRGPG*VVGGRV Trigger: TACCCTGCCTCCCACAACCCAGCCAGGACCCCGGGA...CAAGTCTGCCCCAGGCCCCAAGGCCATCCAGCTGCTAGGATATACACATGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CAA 90 bp | GGTTGGTTCAGGATACAGGCTGAATGGGCCCTGCTTGCCCTGGGATaGGCCGGGGAGAGTCCAGCTCTGACAAAGGGAACTGAGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GWFRIQAEWALLALG*AGESPALTKGTEWE Trigger: CTCCCACTCAGTTCCCTTTGTCAGAGCTGGACTCTCCCCGGCCAATCCCAGGGCAAGCAGGGCCCATTCAGCCTGTATCCTGAACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR CCA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGAGCTTCCCGGGGTCCTaGCTGGGTTGTGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PVHVHLLHIPSPNHLSALSFPGS*LGCGRQ Trigger: CTGCCTCCCACAACCCAGCCAGGACCCCGGGAAGCT...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CAA 90 bp | ACAGTGCCCCAGCTCACTGGCCACATGGTCATCTCTGCCCCTGGCTaGGCCCATAGCCCTCTATGTGTCAATGTGTCCACTCCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TVPQLTGHMVISAPG*AHSPLCVNVSTPSQ Trigger: CTGACTGGGAGTGGACACATTGACACATAGAGGGCTATGGGCCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR GCA 90 bp | AGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTCAGCCACCGGACAGCTaGCTAGTCCCTGCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SDVEREGLGNIDAALLLSQPPDS*LVPAPD Trigger: ATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTG...AGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAAACCCCTCCTACCCAAGGAGCCCGGTTCCTCAGAGCTGGAGAGAAACCCCTGTGGGTGTGGTTTaGGGGGTAAGTGGAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: GRNPSYPRSPVPQSWRETPVGVV*GVSGGT Trigger: AGTACCTCCACTTACCCCCCAAACCACACCCACAGG...GGTTTCTCTCCAGCTCTGAGGAACCGGGCTCCTTGGGTAGGAGGGGTTTCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR GCA 90 bp | TATCCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCAGCCACCGGACAGCTaGCTAGTCCCTGCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: YPVHVHLLHIPSPNHLSAQPPDS*LVPAPD Trigger: ATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTG...GGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR CCA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGCCGGTTCCTCAGAGCTaGAGAGAAACCTGGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PVHVHLLHIPSPNHLSALPVPQS*RETWAA Trigger: AGCTGCCCAGGTTTCTCTCCAGCTCTGAGGAACCGG...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR TCA 90 bp | TATCCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCGTGGCACTATGGGGGTaGGTGATGTGGAAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YPVHVHLLHIPSPNHLSAVALWG*VMWKGR Trigger: CCTCCCTTTCCACATCACTCACCCCCATAGTGCCAC...GGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR GCA 72 bp | CGTTCAGGCCCAGCCACCGGACAGCTGCCTAGTCCCTaGCCCAGATGTGGGGAGGCCGCCCCCAAGACAGGT | + |
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Preference number: 3 (lower is better) Translates to: RSGPATGQLPSP*PRCGEAAPKTG Trigger: ACCTGTCTTGGGGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCCTGAACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTGAATGGGCCCTGCTTGCCCTGGGATTGGCCGGGGAGAGTCCAGCTCTGGTGGAAAGGGAGGGGTaGGGGAATATAGACGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QAEWALLALGLAGESPALVEREG*GNIDAA Trigger: GGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCAC...CAGAGCTGGACTCTCCCCGGCCAATCCCAGGGCAAGCAGGGCCCATTCAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | AGTGAAGACCCACAGTGCCCCAGCTCACTGGCCACATaGTCATCTCTGCCCCTGGCTTGGCCCATAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: SEDPQCPSSLAT*SSLPLAWPIAL Trigger: GAGGGCTATGGGCCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTGTGGGTCTTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 72 bp | CCCGGTTCCTCAGAGCTGGAGAGAAACCTGGGCAGCTaGGAAGCAAGCATCCAGCGCCACCTAGTGTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PGSSELERNLGS*EASIQRHLVCP Trigger: AGGGCACACTAGGTGGCGCTGGATGCTTGCTTCTCAGCTGCCCAGGTTTCTCTCCAGCTCTGAGGAACCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 72 bp | AGGACAGAGGCAGGGCTCAACTGCAGACAGCCTTCCTaGTGGGTTGGTTCAGGATACAGGCTGAATGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: RTEAGLNCRQPS*WVGSGYRLNGP Trigger: GGGCCCATTCAGCCTGTATCCTGAACCAACCCATCAGGAAGGCTGTCTGCAGTTGAGCCCTGCCTCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | GTGTCAATGTGTCCACTCCCAGTCAGAACAGCAGACTaGGTTCTGATCCTGAGCTTCCCGGGGTCCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VSMCPLPVRTAD*VLILSFPGSWL Trigger: CAGCCAGGACCCCGGGAAGCTCAGGATCAGAACCCAGTCTGCTGTTCTGACTGGGAGTGGACACATTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | GCCGGGGAGAGTCCAGCTCTGACAAAGGGAACTGAGTaGGAGGTCCACCATCCCAAGATAAAGAACCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: AGESPALTKGTE*EVHHPKIKNQG Trigger: CCCCTGGTTCTTTATCTTGGGATGGTGGACCTCCCACTCAGTTCCCTTTGTCAGAGCTGGACTCTCCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR-3UTR CAA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGATCTCTGCCCCTGGCTaGGCCCATAGCCCTCTATGT | + |
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Preference number: 3 (lower is better) Translates to: PVHVHLLHIPSPNHLSALISAPG*AHSPLC Trigger: ACATAGAGGGCTATGGGCCAAGCCAGGGGCAGAGAT...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR GCA 72 bp | CCTGAACTGCAGTACACTCTAAGTGAAGACCCACAGTaGCCCAGCTCACTGGCCACATGGTCATCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PELQYTLSEDPQ*PSSLATWSSLP Trigger: GGGCAGAGATGACCATGTGGCCAGTGAGCTGGGGCACTGTGGGTCTTCACTTAGAGTGTACTGCAGTTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | AGCTCACTGGCCACATGGTCATCTCTGCCCCTGGCTTaGCCCATAGCCCTCTATGTGTCAATGTGTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: SSLATWSSLPLA*PIALYVSMCPL Trigger: GAGTGGACACATTGACACATAGAGGGCTATGGGCCAAGCCAGGGGCAGAGATGACCATGTGGCCAGTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 72 bp | CTGAGAAGCAAGCATCCAGCGCCACCTAGTGTGCCCTaGCAAAAAGAGATCCCAACGAACCCCAAAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LRSKHPAPPSVP*QKEIPTNPKGL Trigger: CAGGCCTTTGGGGTTCGTTGGGATCTCTTTTTGTCAGGGCACACTAGGTGGCGCTGGATGCTTGCTTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | TCAGGTCATGTGTATATCCTAGCAGCTGGATGGCCTTaGGGCCTGGGGCAGACTTGGAGTTCCAGTGACTGT | + |
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Preference number: 3 (lower is better) Translates to: SGHVYILAAGWP*GLGQTWSSSDC Trigger: ACAGTCACTGGAACTCCAAGTCTGCCCCAGGCCCCAAGGCCATCCAGCTGCTAGGATATACACATGACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR TCA 72 bp | ATTGGCCGGGGAGAGTCCAGCTCTGACAAAGGGAACTaGGTGGGAGGTCCACCATCCCAAGATAAAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: IGRGESSSDKGN*VGGPPSQDKEP Trigger: TGGTTCTTTATCTTGGGATGGTGGACCTCCCACTCAGTTCCCTTTGTCAGAGCTGGACTCTCCCCGGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | AGTCTATCAGGTCATGTGTATATCCTAGCAGCTGGATaGCCTTGGGGCCTGGGGCAGACTTGGAGTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SLSGHVYILAAG*PWGLGQTWSSS Trigger: ACTGGAACTCCAAGTCTGCCCCAGGCCCCAAGGCCATCCAGCTGCTAGGATATACACATGACCTGATAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR CCA 72 bp | CCAAAGTCTATCAGGTCATGTGTATATCCTAGCAGCTaGATGGCCTTGGGGCCTGGGGCAGACTTGGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: PKSIRSCVYPSS*MALGPGADLEF Trigger: GAACTCCAAGTCTGCCCCAGGCCCCAAGGCCATCCAGCTGCTAGGATATACACATGACCTGATAGACTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| 3UTR GCA 72 bp | GTTCCAGTGACTGTTGATGACTTGATTCCAGAGTTCTaGTTCCGCCTCCTACCAGCGTATCCGGTGCATGTT | + |
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Preference number: 3 (lower is better) Translates to: VPVTVDDLIPEF*FRLLPAYPVHV Trigger: AACATGCACCGGATACGCTGGTAGGAGGCGGAAGCAGAACTCTGGAATCAAGTCATCAACAGTCACTGGAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | GGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCGGACCGGGATGGTGCTaGTGTGCCAGATGGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPATGQLPSPCPRCGEAAGPGWC*CARWRG Trigger: CCCACGCCATCTGGCACATCAGCACCATCCCGGTCC...GGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCCAGGCCATTGAGGAGTaGGGCCACGGCAGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AQPPDSCLVPAPDVGRPPQAIEE*GHGRSW Trigger: CCAGCTTCTGCCGTGGCCTCACTCCTCAATGGCCTG...GGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | GGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCACCTTGCCATGGAACTaGGGCACTCTGTGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPATGQLPSPCPRCGEAATLPWN*GTLWPS Trigger: GGAGGGCCACAGAGTGCCTCAGTTCCATGGCAAGGT...GGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128897.2 |
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| CDS-3UTR GCA 90 bp | GGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCTGGCGGGAGCGGAAGTaGTTCAGTGCGTCTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: GPATGQLPSPCPRCGEAAWRERK*FSASPE Trigger: TTCGGGAGACGCACTGAAGCACTTCCGCTCCCGCCA...GGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCATGTGCCAGATGGCGTaGGCGTCCAGGACCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GPATGQLPSPCPRCGEAAMCQMA*ASRTQK Trigger: CTTCTGGGTCCTGGACGCCCACGCCATCTGGCACAT...GGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGAATGGGCCCTGCTTGCCCTGGGATTGGCCGGGGAGAGTCCAGCTCTGGGGATGGTGCTGATGTaGCAGATGGCGTGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: QAEWALLALGLAGESPALGMVLM*QMAWAS Trigger: GGACGCCCACGCCATCTGGCACATCAGCACCATCCC...CAGAGCTGGACTCTCCCCGGCCAATCCCAGGGCAAGCAGGGCCCATTCAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCCTGAAAAAGAGGGTGTaGACCGGGATGGTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: AQPPDSCLVPAPDVGRPPLKKRV*TGMVLM Trigger: CATCAGCACCATCCCGGTCCACACCCTCTTTTTCAG...GGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | GGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCAGTCCATCTTCTCTGTaGGGTCAGTGTCCCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: GPATGQLPSPCPRCGEAASPSSL*GQCPWY Trigger: ATACCAGGGACACTGACCTCACAGAGAAGATGGACT...GGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCCCACCAGAACCAAGCATTaGGAGACACCTTGCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: PATGQLPSPCPRCGEAAPTRTKH*ETPCHG Trigger: TCCATGGCAAGGTGTCTCTCAATGCTTGGTTCTGGT...GGGGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | TGGGTTCTGATCCTGAGCTTCCCGGGGTCCTGGCTGGGTTGTGGGAGGCAGGGTCACTTGCCATGGAACTaGGGCACTCTGTGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WVLILSFPGSWLGCGRQGHLPWN*GTLWPS Trigger: GGAGGGCCACAGAGTGCCTCAGTTCCATGGCAAGTG...ACCCTGCCTCCCACAACCCAGCCAGGACCCCGGGAAGCTCAGGATCAGAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | CTTGCCCTGGGATTGGCCGGGGAGAGTCCAGCTCTGACAAAGGGAACTGAGTGGATACACCTGCGGGTGTaGGGGAGGCGCTGGCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LALGLAGESPALTKGTEWIHLRV*GRRWRF Trigger: GAACCGCCAGCGCCTCCCTCACACCCGCAGGTGTAT...CCACTCAGTTCCCTTTGTCAGAGCTGGACTCTCCCCGGCCAATCCCAGGGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CCA 90 bp | TTCCCGGGGTCCTGGCTGGGTTGTGGGAGGCAGGGTAGAAACCCCTCCTACCCAATGTGCCAGATGGCGTaGGCGTCCAGGACCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FPGSWLGCGRQGRNPSYPMCQMA*ASRTQK Trigger: CTTCTGGGTCCTGGACGCCCACGCCATCTGGCACAT...TGGGTAGGAGGGGTTTCTACCCTGCCTCCCACAACCCAGCCAGGACCCCGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | TTGGTCTCCGTTCAGGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATAAGCTGGCTCTTGGATaGACAGGAACCGGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LVSVQAQPPDSCLVPAPDKLALG*TGTGRR Trigger: CCTTCTCCCGGTTCCTGTTCATCCAAGAGCCAGCTT...ATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCCTGAACGGAGACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGGGCTGGCCAGGCCATTaGGGAGTGAGGCCACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVHVHLLHIPSPNHLSALGWPGH*GVRPRQ Trigger: CTGCCGTGGCCTCACTCCTCAATGGCCTGGCCAGCC...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | GATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTGTGATACACCTGCGGGTGTaGGGGAGGCGCTGGCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: DVEREGLGNIDAALLLSVIHLRV*GRRWRF Trigger: GAACCGCCAGCGCCTCCCTCACACCCGCAGGTGTAT...CACAGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | GTGAGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCGGACCGGGATGGTGCTaGTGTGCCAGATGGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDVEREGLGNIDAALLLGPGWC*CARWRG Trigger: CCCACGCCATCTGGCACATCAGCACCATCCCGGTCC...GAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTATCAGGTCATGTCATGGGGGAGGAGGCTaGCACAGAGGCGCGATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGWAPTLPPSIPKSIRSCHGGGG*HRGAIA Trigger: CGCTATCGCGCCTCTGTGCCAGCCTCCTCCCCCATG...ACATGACCTGATAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR GCA 90 bp | GTGAGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCGGGATGGTGCTGATGTaGCAGATGGCGTGGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSDVEREGLGNIDAALLLGMVLM*QMAWAS Trigger: GGACGCCCACGCCATCTGGCACATCAGCACCATCCC...GAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR GCA 90 bp | GATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTGTGTGGCGGGAGCGGAAGTaGTTCAGTGCGTCTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DVEREGLGNIDAALLLSVWRERK*FSASPE Trigger: TTCGGGAGACGCACTGAAGCACTTCCGCTCCCGCCA...CACAGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGAGCCTTGGCATAGCTATCCTCCCCCGCAAAGAGGGGGTAGAGGACAGAGCAGAAGCTGGCTCTTaGATGAACAGGAACCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SWSLGIAILPRKEGVEDRAEAGS*MNRNRE Trigger: CTCCCGGTTCCTGTTCATCCAAGAGCCAGCTTCTGC...TCTGTCCTCTACCCCCTCTTTGCGGGGGAGGATAGCTATGCCAAGGCTCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | CGCAAAGAGGGGGTAGAGGACAGAGGCAGGGCTCAACTGCAGACAGCCTTCCTGAGTCCATCTTCTCTGTaGGGTCAGTGTCCCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKEGVEDRGRAQLQTAFLSPSSL*GQCPWY Trigger: ATACCAGGGACACTGACCTCACAGAGAAGATGGACT...CAGGAAGGCTGTCTGCAGTTGAGCCCTGCCTCTGTCCTCTACCCCCTCTTTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR GCA 90 bp | GCAAGCATCCAGCGCCACCTAGTGTGCCCTGACAAAAAGAGATCCCAACGAACCCCCAAGCGAAGGCCATaGAGGTATGGTACATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASIQRHLVCPDKKRSQRTPKRRP*RYGTWG Trigger: CCCCCATGTACCATACCTGCATGGCCTTCGCTTGGG...GGTTCGTTGGGATCTCTTTTTGTCAGGGCACACTAGGTGGCGCTGGATGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | CAGGTTCCATGTGAAGGCCAGCAAGGGCCAGGTAGCTACAGGATTTCAGGTCCAGTAGTCCCACGGTCCTaGCACAGCACAGGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPCEGQQGPGSYRISGPVVPRS*HSTGKQ Trigger: CTGTTTACCTGTGCTGTGTCAGGACCGTGGGACTAC...TGGACCTGAAATCCTGTAGCTACCTGGCCCTTGCTGGCCTTCACATGGAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CCA 90 bp | AGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTAAGGCCATGCAGGTATaGTACATGGGGGAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVEREGLGNIDAALLLSKAMQV*YMGEEA Trigger: AGCCTCCTCCCCCATGTACCATACCTGCATGGCCTT...AGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CCA 90 bp | GGCAGGGCTCAACTGCAGACAGCCTTCCTGATGGGTTGGTTCAGGATACAGGCTCTGAAAAAGAGGGTGTaGACCGGGATGGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQLQTAFLMGWFRIQALKKRV*TGMVLM Trigger: CATCAGCACCATCCCGGTCCACACCCTCTTTTTCAG...AGCCTGTATCCTGAACCAACCCATCAGGAAGGCTGTCTGCAGTTGAGCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | GATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTGTGCATCTTCCAGAAACCTaGAAAAGAGGGTGTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: DVEREGLGNIDAALLLSVHLPET*KRGCGP Trigger: CGGTCCACACCCTCTTTTTCAGGTTTCTGGAAGATG...CACAGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR GCA 90 bp | CAAAGAGGGGGTAGAGGACAGAGGCAGGGCTCAACTGCAGACAGCCTTCCTGATACATACACTCATACTTaGAGTCGTCCCGACAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRGGRGQRQGSTADSLPDTYTHT*SRPDRS Trigger: GGACCTGTCGGGACGACTGCAAGTATGAGTGTATGT...ATCAGGAAGGCTGTCTGCAGTTGAGCCCTGCCTCTGTCCTCTACCCCCTCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CCA 90 bp | GTGAGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCAGTGTCCCTGGTATaGAAGACTGTGGACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSDVEREGLGNIDAALLLSVSLV*KTVDQN Trigger: GTTCTGGTCCACAGTCTTCCATACCAGGGACACTGA...GAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTATCAGGTCATGTGGTAGAGGCCAACAGTaGACCACATACACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TGWAPTLPPSIPKSIRSCGRGQQ*TTYTHT Trigger: AGTATGAGTGTATGTGGTTCACTGTTGGCCTCTACC...ACATGACCTGATAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | GTGAGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCGGTAGAGGCCAACAGTaGACCACATACACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: VSDVEREGLGNIDAALLLGRGQQ*TTYTHT Trigger: AGTATGAGTGTATGTGGTTCACTGTTGGCCTCTACC...GAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGATGCAGGATGACAGCTaGAGCGCAGAAGTAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVHVHLLHIPSPNHLSALMQDDS*SAEVVH Trigger: ATGGACTACTTCTGCGCTTCAGCTGTCATCCTGCAT...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR TCA 90 bp | AGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTATGCAGGATGACAGCTaGAGCGCAGAAGTAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDVEREGLGNIDAALLLSMQDDS*SAEVVH Trigger: ATGGACTACTTCTGCGCTTCAGCTGTCATCCTGCAT...AGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR TCA 90 bp | GCAAGCATCCAGCGCCACCTAGTGTGCCCTGACAAAAAGAGATCCCAACGAACCCATCTTCCAGAAACCTaGAAAAGAGGGTGTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASIQRHLVCPDKKRSQRTHLPET*KRGCGP Trigger: CGGTCCACACCCTCTTTTTCAGGTTTCTGGAAGATG...GGTTCGTTGGGATCTCTTTTTGTCAGGGCACACTAGGTGGCGCTGGATGCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR GCA 90 bp | CAGGTTCCATGTGAAGGCCAGCAAGGGCCAGGTAGCTACAGGATTTCAGGTCCAACATACACTCATACTTaGAGTCGTCCCGACAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPCEGQQGPGSYRISGPTYTHT*SRPDRS Trigger: GGACCTGTCGGGACGACTGCAAGTATGAGTGTATGT...TGGACCTGAAATCCTGTAGCTACCTGGCCCTTGCTGGCCTTCACATGGAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CCA 90 bp | CCGGTGCATGTTCATCTCTTACACATACCTTCCCCAAACCACCTCAGCGCCCTGTCAGTGTCCCTGGTATaGAAGACTGTGGACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVHVHLLHIPSPNHLSALSVSLV*KTVDQN Trigger: GTTCTGGTCCACAGTCTTCCATACCAGGGACACTGA...CAGGGCGCTGAGGTGGTTTGGGGAAGGTATGTGTAAGAGATGAACATGCACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CAA 90 bp | CCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCCCCTAGGCTCATGTAGATaGGCTGGCGGGAGCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PATGQLPSPCPRCGEAAPLGSCR*AGGSGS Trigger: ACTTCCGCTCCCGCCAGCCAATCTACATGAGCCTAG...GGGGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGG 68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATGTGGGGAGGCCGCCCCCGACCAGAACCAAGCATaGAGAGACACCTTGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PATGQLPSPCPRCGEAAPDQNQA*RDTLPW Trigger: CCATGGCAAGGTGTCTCTCAATGCTTGGTTCTGGTC...GGGGGCGGCCTCCCCACATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128897.2 |
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| CDS CCA 90 bp | CACCCAAGCGAAGGCCATGCAGGTATGGTACATGGGGGAGGAGGCTaGCACAGAGGCGCGATAGCGGCAGAGCATCACCAGGCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPSEGHAGMVHGGGG*HRGAIAAEHHQAGQ Trigger: CTGGCCAGCCTGGTGATGCTCTGCCGCTATCGCGCCTCTGTGCCAGCCTCCTCCCCCATGTACCATACCTGCATGGCCTTCGCTTGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS TCA 90 bp | GCGATAGCGGCAGAGCATCACCAGGCTGGCCAGGCCATTGAGGAGTaGGGCCACGGCAGAAGCTGGCTCTTGGATGAACAGGAACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AIAAEHHQAGQAIEE*GHGRSWLLDEQEPG Trigger: TCCCGGTTCCTGTTCATCCAAGAGCCAGCTTCTGCCGTGGCCTCACTCCTCAATGGCCTGGCCAGCCTGGTGATGCTCTGCCGCTATCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CAA 90 bp | GGGGAGGTATGTGATTTGAGTGGAGTGCAAAGGGGGCACTGGGTGGGCACCCACCTAGGCTCATGTAGATaGGCTGGCGGGAGCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEVCDLSGVQRGHWVGTHLGSCR*AGGSGS Trigger: ACTTCCGCTCCCGCCAGCCAATCTACATGAGCCTAG...GTGGGTGCCCACCCAGTGCCCCCTTTGCACTCCACTCAAATCACATACCTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CAA 90 bp | TTGGTCTCCGTTCAGGCCCAGCCACCGGACAGCTGCCTAGTCCCTGCCCCAGATCACATACACTCATACTaGCAGTCGTCCCGACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSVQAQPPDSCLVPAPDHIHSY*QSSRQV Trigger: GACCTGTCGGGACGACTGCAAGTATGAGTGTATGTG...ATCTGGGGCAGGGACTAGGCAGCTGTCCGGTGGCTGGGCCTGAACGGAGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS-3UTR CAA 90 bp | GGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTATCAGGTCATGTGTATAGGCTGGCCAGGCCATaGAGGAGTGAGGCCACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGHPHSHPASQSLSGHVYRLARP*RSEATA Trigger: TGCCGTGGCCTCACTCCTCAATGGCCTGGCCAGCCT...ATACACATGACCTGATAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CAA 90 bp | GGTGGGCACCCACACTCCCACCCAGCATCCCAAAGTCTATCAGGTCATGTGTATGGCAGAAGCTGGCTCTaGGATGAACAGGAACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGHPHSHPASQSLSGHVYGRSWL*DEQEPG Trigger: TCCCGGTTCCTGTTCATCCAAGAGCCAGCTTCTGCC...ATACACATGACCTGATAGACTTTGGGATGCTGGGTGGGAGTGTGGGTGCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS-3UTR CAA 90 bp | AGTGATGTGGAAAGGGAGGGGTTGGGGAATATAGACGCAGCCCTCCTCCTCTCTCACATACACTCATACTaGCAGTCGTCCCGACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDVEREGLGNIDAALLLSHIHSY*QSSRQV Trigger: GACCTGTCGGGACGACTGCAAGTATGAGTGTATGTG...AGAGAGGAGGAGGGCTGCGTCTATATTCCCCAACCCCTCCCTTTCCACATCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS TCA 90 bp | CACGGTCCTGACACAGCACAGGTAAACAGAATGCAGGATGACAGCTaGAGCGCAGAAGTAGTCCATCTTCTCTGTGAGGTCAGTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HGPDTAQVNRMQDDS*SAEVVHLLCEVSVP Trigger: AGGGACACTGACCTCACAGAGAAGATGGACTACTTCTGCGCTTCAGCTGTCATCCTGCATTCTGTTTACCTGTGCTGTGTCAGGACCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS TCA 72 bp | TGCAGCAGCACTACCACCACCATACACCTGCGGGTGTaGGGGAGGCGCTGGCGGTTCCGTAGGCACCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: CSSTTTTIHLRV*GRRWRFRRHQT Trigger: GGTCTGGTGCCTACGGAACCGCCAGCGCCTCCCTCACACCCGCAGGTGTATGGTGGTGGTAGTGCTGCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS GCA 72 bp | GGCGGGAAGTCAAGCAATTCCAGCAGGGACAGCCCCTaGAGCAGCACTACCACCACCATACACCTGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGKSSNSSRDSP*SSTTTTIHLRV Trigger: CACCCGCAGGTGTATGGTGGTGGTAGTGCTGCTGCAGGGGCTGTCCCTGCTGGAATTGCTTGACTTCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS CAA 72 bp | CGTCCCGACAGGTCCAGCCAGCTAGGCTCATGTAGATaGGCTGGCGGGAGCGGAAGTGCTTCAGTGCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPDRSSQLGSCR*AGGSGSASVRL Trigger: GAGACGCACTGAAGCACTTCCGCTCCCGCCAGCCAATCTACATGAGCCTAGCTGGCTGGACCTGTCGGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS GCA 72 bp | CATGTAGATTGGCTGGCGGGAGCGGAAGTGCTTCAGTaGGTCTCCCGAACAGTTCCGTTCCTCGCATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HVDWLAGAEVLQ*VSRTVPFLASE Trigger: CTCCGATGCGAGGAACGGAACTGTTCGGGAGACGCACTGAAGCACTTCCGCTCCCGCCAGCCAATCTACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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| CDS CCA 72 bp | CCATTGAGGAGTGAGGCCACGGCAGAAGCTGGCTCTTaGATGAACAGGAACCGGGAGAAGGGCCACTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLRSEATAEAGS*MNRNREKGHLP Trigger: TGGCAAGTGGCCCTTCTCCCGGTTCCTGTTCATCCAAGAGCCAGCTTCTGCCGTGGCCTCACTCCTCAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090827.12 |
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| CDS CCA 72 bp | AAGCTGTCATCTTCCAGAAACCTGAAAAAGAGGGTGTaGACCGGGATGGTGCTGATGTGCCAGATGGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KLSSSRNLKKRV*TGMVLMCQMAW Trigger: CCACGCCATCTGGCACATCAGCACCATCCCGGTCCACACCCTCTTTTTCAGGTTTCTGGAAGATGACAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090827.12 ENSMUST00000128897.2 |
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