Pregenerated sensors for PGAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073678Ensembl transcript IDs: ENSMUST00000097739.5
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAACTGCAATAGCAAATGCTACCTATTTATCAGGTCCAGGGGCTaGAGAGGGGGCTTCGTTCAGAGTGCTTGCTCTTCTGGAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: QNCNSKCYLFIRSRG*RGGFVQSACSSGGP Trigger: AGGTCCTCCAGAAGAGCAAGCACTCTGAACGAAGCCCCCTCTCCAGCCCCTGGACCTGATAAATAGGTAGCATTTGCTATTGCAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR GCA 90 bp | AATGATCTCTGTACACAGTCTCCCTCAGCAGCCATGAGGAGTGTGTaGTCTCAACGCTCAACCGTAGAAACTGATCTCACTAGACACCCA | + |
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Preference number: 1 (lower is better) Translates to: NDLCTQSPSAAMRSV*SQRSTVETDLTRHP Trigger: TGGGTGTCTAGTGAGATCAGTTTCTACGGTTGAGCGTTGAGAGCACACACTCCTCATGGCTGCTGAGGGAGACTGTGTACAGAGATCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | GGCCTACTTCTCATATGCCTCCTGCGGCTTTCAAGAACTAAAAACTaGGTTCTGCTTCCCTCTACTTCAGTATCTCCCATAGGAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: GLLLICLLRLSRTKN*VLLPSTSVSPIGGT Trigger: AGTCCCTCCTATGGGAGATACTGAAGTAGAGGGAAGCAGAACTCAGTTTTTAGTTCTTGAAAGCCGCAGGAGGCATATGAGAAGTAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR CCA 90 bp | TCTATAGTCTTTAGAAGGTTCCTGGGATGGCAGATGAAAGCTAGTTaGTATGTACAGGAGTCCTTAAGACAGAGGCCACAGCATCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SIVFRRFLGWQMKAS*YVQESLRQRPQHPF Trigger: GAAGGGATGCTGTGGCCTCTGTCTTAAGGACTCCTGTACATACCAACTAGCTTTCATCTGCCATCCCAGGAACCTTCTAAAGACTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR CCA 90 bp | AAAATACACAGAAAAGTACACAGAGGTGTATTAGTGCACTGCACATaGCACACAGCACTGGGACAAGCATGCATGTTGAGACAGGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: KIHRKVHRGVLVHCT*HTALGQACMLRQGD Trigger: ATCTCCCTGTCTCAACATGCATGCTTGTCCCAGTGCTGTGTGCCATGTGCAGTGCACTAATACACCTCTGTGTACTTTTCTGTGTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | CTAATCTGTCAGATACGACAAGTATACCGATGCTACACCACGGGCTaGAACCATGCTTCAACTACGTCCCTCGAGCATTACAAAACTAAT | + |
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Preference number: 1 (lower is better) Translates to: LICQIRQVYRCYTTG*NHASTTSLEHYKTN Trigger: ATTAGTTTTGTAATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGTATACTTGTCGTATCTGACAGATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR GCA 90 bp | ATACCAAAAATACACAGAAAAGTACACAGAGGTGTATTAGTGCACTaGACATGGCACACAGCACTGGGACAAGCATGCATGTTGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: IPKIHRKVHRGVLVH*TWHTALGQACMLRQ Trigger: CTGTCTCAACATGCATGCTTGTCCCAGTGCTGTGTGCCATGTGCAGTGCACTAATACACCTCTGTGTACTTTTCTGTGTATTTTTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR CCA 90 bp | TCAGTAGACAAACAAATGATGCAAACCCAGAGTTGTTCTGGCCTCTaGAGTTATCCCTTTAACAACCTATCATTGCTACAGGCACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SVDKQMMQTQSCSGL*SYPFNNLSLLQALL Trigger: CAGAAGTGCCTGTAGCAATGATAGGTTGTTAAAGGGATAACTCCAGAGGCCAGAACAACTCTGGGTTTGCATCATTTGTTTGTCTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | ACTCAACAAACACTATGGTACAGTTTATTCCTTTTGACACTCTTCTaGAACAAGGGACTAAAGGGTCTGCCATGTCTAGTACGATGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TQQTLWYSLFLLTLF*NKGLKGLPCLVRWL Trigger: AAGCCATCGTACTAGACATGGCAGACCCTTTAGTCCCTTGTTTCAGAAGAGTGTCAAAAGGAATAAACTGTACCATAGTGTTTGTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | GTCTTAGGAGACACCTCTACAAACCAAGATTTTGCTCTTAATGAGTaGTACAGGTGTGCAATCTATTCAGGCAGTGTTCACATTTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: VLGDTSTNQDFALNE*YRCAIYSGSVHIFS Trigger: ACTGAAAATGTGAACACTGCCTGAATAGATTGCACACCTGTATCACTCATTAAGAGCAAAATCTTGGTTTGTAGAGGTGTCTCCTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | TGCATGCTAACTGGTTTGCCTTATACTATATTAGGTTCTAGTGGATaGACACTGGGGACTGAGCAGAGACATAAAGAAAGCAAAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: CMLTGLPYTILGSSG*TLGTEQRHKESKRN Trigger: GTTTCTTTTGCTTTCTTTATGTCTCTGCTCAGTCCCCAGTGTTCATCCACTAGAACCTAATATAGTATAAGGCAAACCAGTTAGCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | GTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTGTGCCATaGGAAAATTGTAATTATCCAATGAACTCACTCTTGGGTACTCAA | + |
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Preference number: 1 (lower is better) Translates to: VRADTFLLRYVSVVP*ENCNYPMNSLLGTQ Trigger: TTGAGTACCCAAGAGTGAGTTCATTGGATAATTACAATTTTCTCATGGCACAACACTTACATATCTAAGTAGGAATGTATCTGCTCTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR TCA 90 bp | TTTAGTCACTGGGAAATCCTTACTATAAACCTAATAACCCTTATTTaGAAATATAAACGCATCTTGATCTGCCACAACACTGACCACAAG | + |
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Preference number: 1 (lower is better) Translates to: FSHWEILTINLITLI*KYKRILICHNTDHK Trigger: CTTGTGGTCAGTGTTGTGGCAGATCAAGATGCGTTTATATTTTCAAATAAGGGTTATTAGGTTTATAGTAAGGATTTCCCAGTGACTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCCTGGTCCAAAAGGCATaGGCCGCTTCTCCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FDIKSFTNPEACQYGQAGLVQKA*AASPSS Trigger: ACTGGAAGGAGAAGCGGCTCATGCCTTTTGGACCAG...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTCCCTCAGCAGCCATaGGGAGTGTGTGCTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHLPQQP*GVCALN Trigger: GTTGAGAGCACACACTCCTCATGGCTGCTGAGGGAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACGGACCTCACTGTTCCTaGAGGTGGCGCTGTACTGTG | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHGPHCS*RWRCTV Trigger: CACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCC...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCCTAACATGGCTGACGTaGGCAGAACCCTCTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: FDIKSFTNPEACQYGQAGLTWLT*AEPSGW Trigger: CCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAG...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACGCTGTACTGTGTCACTaGTCCAAAAGGCATGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHAVLCH*SKRHEP Trigger: CGGCTCATGCCTTTTGGACCAGTGACACAGTACAGC...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | CACATCTCCAGCAAAGTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTGTTGGCAGTAGCAGCTaGGAGGCTGTGACACCGTGT | + |
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Preference number: 2 (lower is better) Translates to: HISSKVRADTFLLRYVSVVGSSS*EAVTPC Trigger: ACACGGTGTCACAGCCTCTCAGCTGCTACTGCCAAC...AACACTTACATATCTAAGTAGGAATGTATCTGCTCTAACTTTGCTGGAGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACACACATTCGGACTGCTaGCCTGACTCCCATTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHTHSDC*PDSHFP Trigger: TGGAAAATGGGAGTCAGGTCAGCAGTCCGAATGTGT...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTTAGGTTCTAGTGGATaGACACTGGGGACTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHLGSSG*TLGTEQ Trigger: CTGCTCAGTCCCCAGTGTTCATCCACTAGAACCTAA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTGGATCCCCACCTCTTaGGTATTTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHWIPTS*VFVCVC Trigger: ACACACACACACAAATACTCAAGAGGTGGGGATCCA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACGACAGGCTCCCTTCATaGCGCATTGTTACTACACTA | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHDRLPS*RIVTTL Trigger: TAGTGTAGTAACAATGCGTCATGAAGGGAGCCTGTC...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCATGCCAGTCAGACAGTaGCAGAATCATACAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: FDIKSFTNPEACQYGQAGMPVRQ*QNHTNQ Trigger: TTGGTTTGTATGATTCTGTCACTGTCTGACTGGCAT...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACTTTGCCCACCATGGCTaGCAAAAACTGACCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: RQSALYELVSIVKMCHIDFAHHG*QKLTRL Trigger: GAGTCTGGTCAGTTTTTGGCAGCCATGGTGGGCAAA...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACAAACTAAAGGAACACTaGAATTCCCATGCCGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHKLKEH*NSHAAP Trigger: AGGAGCGGCATGGGAATTGCAGTGTTCCTTTAGTTT...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCAATGTTGTATTTATGCTaGGACCCTTCCTCCTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPMLYLC*DPSSSV Trigger: TACTGAGGAGGAAGGGTCTCAGCATAAATACAACAT...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACAAACTTTGCCCACCATaGCTGCCAAAAACTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: RQSALYELVSIVKMCHIDKLCPP*LPKTDQ Trigger: CTGGTCAGTTTTTGGCAGCCATGGTGGGCAAAGTTT...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCAAGTTGTTCTGGCCTCTaGAGTTATCCCTTTAACAAC | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPSCSGL*SYPFNN Trigger: GTTGTTAAAGGGATAACTCCAGAGGCCAGAACAACT...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCATTGTAATTATCCAATaGACTCACTCTTGGGTACTC | + |
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Preference number: 2 (lower is better) Translates to: FDIKSFTNPEACQYGQAGIVIIQ*THSWVL Trigger: GAGTACCCAAGAGTGAGTTCATTGGATAATTACAAT...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACGATACAACCCATTCATaGGCAATACTGGCTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RQSALYELVSIVKMCHIDDTTHS*AILAKQ Trigger: CTGCTTAGCCAGTATTGCTCATGAATGGGTTGTATC...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAATCCTGGGATGGCAGATaGAAGCTAGTTGGTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKSWDGR*KLVGMY Trigger: GTACATACCAACTAGCTTTCATCTGCCATCCCAGGA...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCACCATTCCTGGGCACTaGGAAGGACATAAGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QLRDTKVNVGPLVLKTFITIPGH*EGHKFT Trigger: TGTGAACTTATGTCCTTCTCAGTGCCCAGGAATGGT...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATGTGAGTGTGTATCTCTaGGTATGTGTGGCAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNVSVYL*VCVANG Trigger: GCCATTTGCCACACATACTCAGAGATACACACTCAC...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCTGCCAATGCAGAATCTaGAAGAACATTCTTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FDIKSFTNPEACQYGQAGCQCRI*KNILFL Trigger: TAAGAAAAGAATGTTCTTGCAGATTCTGCATTGGCA...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCATGGAATCAACTGCTCTaGTTTACTTCATATTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPWNQLL*FTSYLW Trigger: CCACAAATATGAAGTAAACCAGAGCAGTTGATTCCA...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCTGGTTCCCTTTATTCTaGCAAGTGACACACTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIWFPLF*QVTHSP Trigger: TGGGGAGTGTGTCACTTGCCAGAATAAAGGGAACCA...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCATCATCAGAAATTAACTaGCTTCGTAGTATAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPSSEIN*LRSIRT Trigger: CGTCCTTATACTACGAAGCCAGTTAATTTCTGATGA...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCACTTGTTCAAAAAGTCTaGAGTAAAATTCTAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPLVQKV*SKILAV Trigger: GACAGCTAGAATTTTACTGCAGACTTTTTGAACAAG...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTCTAACACCAAACTTTaGAAAGTTCTTTCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TKNRYTLIPERRLKANIHSNTKL*KVLSVC Trigger: ACACACAGAAAGAACTTTCCAAAGTTTGGTGTTAGA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCATACTTAATTTTGGCATaGAATGAATCCAGACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QKKHHREGFNCSNQTSTPYLILA*NESRQA Trigger: AGCTTGTCTGGATTCATTCCATGCCAAAATTAAGTA...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATATACCACTGACAGAATaGAAGACAGCATGTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNIPLTE*KTACVE Trigger: CTCTACACATGCTGTCTTTCATTCTGTCAGTGGTAT...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR CAA 90 bp | ATCTGCCACAACACTGACCACAAGTCTCAGAGGGAATGCACATCTTaGATAGGATTATTATCAATAAGACTAAGATACATTTCAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: ICHNTDHKSQRECTS*IGLLSIRLRYISVI Trigger: AATCACTGAAATGTATCTTAGTCTTATTGATAATAATCCTATCAAAGATGTGCATTCCCTCTGAGACTTGTGGTCAGTGTTGTGGCAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAATCAACAATGACAGAATaGTTACAGGTTGAGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKSTMTE*LQVESD Trigger: GTCAGACTCAACCTGTAAGCATTCTGTCATTGTTGA...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCATTTGGCACAAGATATaGATGCTAACTGGTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIIWHKI*MLTGLP Trigger: AGGCAAACCAGTTAGCATGCATATCTTGTGCCAAAT...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATCAGATGAAAGCTAGTTaGTATGTACAGGAGTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNQMKAS*YVQESL Trigger: TAAGGACTCCTGTACATACCAACTAGCTTTCATCTG...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAAAACCCTCGCTTTAATTaGAGGCTCTTTTTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKNPRFN*RLFFTD Trigger: ATCTGTGAAAAAGAGCCTCCAATTAAAGCGAGGGTT...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCATTCATGAGCAATACTaGCTAAGCAGGGAGACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIIHEQY*LSRETL Trigger: TAAAGTCTCCCTGCTTAGCCAGTATTGCTCATGAAT...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CAA 90 bp | GTACCAATGCCAGGGTTTTTCATTAACAACTGTATTTCAGAGTATTaGGCACAAGATATGCATGCTAACTGGTTTGCCTTATACTATATT | + |
|
Preference number: 2 (lower is better) Translates to: VPMPGFFINNCISEY*AQDMHANWFALYYI Trigger: AATATAGTATAAGGCAAACCAGTTAGCATGCATATCTTGTGCCAAATACTCTGAAATACAGTTGTTAATGAAAAACCCTGGCATTGGTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATACAGTTTATTCCTTTTaGCACTCTTCTGAAACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNTVYSF*HSSETR Trigger: CCTTGTTTCAGAAGAGTGTCAAAAGGAATAAACTGT...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCGATTCTATCAAAGCATaGCCATCTGTGTTTATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIDSIKA*PSVFMC Trigger: ACACATAAACACAGATGGGCATGCTTTGATAGAATC...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAACCATGTCTAGTACGATaGCTTTCCTTTAAAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKPCLVR*LSFKSL Trigger: AAGACTTTTAAAGGAAAGCCATCGTACTAGACATGG...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | CTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTaGTCCAAAAGGCATGAGCCGCTTCTCCTTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTVPGGGAVLCH*SKRHEPLLLPV Trigger: GACTGGAAGGAGAAGCGGCTCATGCCTTTTGGACCAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | GGGTCCTCATGCTTGCACCGCAGGCATGTGACTGTCTaGACCATCTCTCCAGGCCTACTTCTCATATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSSCLHRRHVTV*TISPGLLLICL Trigger: GAGGCATATGAGAAGTAGGCCTGGAGAGATGGTTCAGACAGTCACATGCCTGCGGTGCAAGCATGAGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | CTACACTTGGGTCCTCATGCTTGCACCGCAGGCATGTaGCTGTCTGAACCATCTCTCCAGGCCTACTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHLGPHACTAGM*LSEPSLQAYFS Trigger: TGAGAAGTAGGCCTGGAGAGATGGTTCAGACAGTCACATGCCTGCGGTGCAAGCATGAGGACCCAAGTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCGGCAGAACCCTCTGGTaGGCAGTAGCAGCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FDIKSFTNPEACQYGQAGGRTLW*AVAAER Trigger: CCTCTCAGCTGCTACTGCCAACCAGAGGGTTCTGCC...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | CAGATACGACAAGTATACCGATGCTACACCACGGGCTaGAACCATGCTTCAACTACGTCCCTCGAGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: QIRQVYRCYTTG*NHASTTSLEHY Trigger: GTAATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGTATACTTGTCGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | AATAGACTTGTTTTCTCCAGAGGACCTCACTGTTCCTaGAGGTGGCGCTGTACTGTGTCACTGGTCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NRLVFSRGPHCS*RWRCTVSLVQK Trigger: CTTTTGGACCAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAACAAGTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | AATAGCAAATGCTACCTATTTATCAGGTCCAGGGGCTaGAGAGGGGGCTTCGTTCAGAGTGCTTGCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NSKCYLFIRSRG*RGGFVQSACSS Trigger: AGAAGAGCAAGCACTCTGAACGAAGCCCCCTCTCCAGCCCCTGGACCTGATAAATAGGTAGCATTTGCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | GGGCTTCGTTCAGAGTGCTTGCTCTTCTGGAGGACCTaGGTTTGGTTCCTAGTATTGATATCCAGCAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLRSECLLFWRT*VWFLVLISSNS Trigger: TGAATTGCTGGATATCAATACTAGGAACCAAACTCAGGTCCTCCAGAAGAGCAAGCACTCTGAACGAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR GCA 72 bp | GAACCATCTCTCCAGGCCTACTTCTCATATGCCTCCTaGGGCTTTCAAGAACTAAAAACTGAGTTCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EPSLQAYFSYAS*GFQELKTEFCF Trigger: GAAGCAGAACTCAGTTTTTAGTTCTTGAAAGCCGCAGGAGGCATATGAGAAGTAGGCCTGGAGAGATGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR GCA 72 bp | ATACACAGAAAAGTACACAGAGGTGTATTAGTGCACTaGACATGGCACACAGCACTGGGACAAGCATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: IHRKVHRGVLVH*TWHTALGQACM Trigger: CATGCATGCTTGTCCCAGTGCTGTGTGCCATGTGCAGTGCACTAATACACCTCTGTGTACTTTTCTGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | TTTAGAAGGTTCCTGGGATGGCAGATGAAAGCTAGTTaGTATGTACAGGAGTCCTTAAGACAGAGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FRRFLGWQMKAS*YVQESLRQRPQ Trigger: CTGTGGCCTCTGTCTTAAGGACTCCTGTACATACCAACTAGCTTTCATCTGCCATCCCAGGAACCTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | GGGGAGACAGGAGGCACCAGACTCATTCCACAGTTATaGAATCAACTGCTCTGGTTTACTTCATATTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GETGGTRLIPQL*NQLLWFTSYLW Trigger: CCACAAATATGAAGTAAACCAGAGCAGTTGATTCCATAACTGTGGAATGAGTCTGGTGCCTCCTGTCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | AGAAAAGTACACAGAGGTGTATTAGTGCACTGCACATaGCACACAGCACTGGGACAAGCATGCATGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKVHRGVLVHCT*HTALGQACMLR Trigger: TCTCAACATGCATGCTTGTCCCAGTGCTGTGTGCCATGTGCAGTGCACTAATACACCTCTGTGTACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | AGCACTGCATCTATAGTCTTTAGAAGGTTCCTGGGATaGCAGATGAAAGCTAGTTGGTATGTACAGGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: STASIVFRRFLG*QMKASWYVQES Trigger: GGACTCCTGTACATACCAACTAGCTTTCATCTGCCATCCCAGGAACCTTCTAAAGACTATAGATGCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTAGACACCCACTGCTaGCACAACTTCTTTGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TKNRYTLIPERRLKANIHLDTHC*HNFFVN Trigger: ATTGACAAAGAAGTTGTGCAAGCAGTGGGTGTCTAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR GCA 72 bp | CATTTCCCACTGATGTTCAAGTCAACAATGACAGAATaGTTACAGGTTGAGTCTGACTCGAGATACCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: HFPLMFKSTMTE*LQVESDSRYQL Trigger: GAGTTGGTATCTCGAGTCAGACTCAACCTGTAAGCATTCTGTCATTGTTGACTTGAACATCAGTGGGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | GTTCCCTTTATTCTGGCAAGTGACACACTCCCCAAATaGACCGTGACCCTAAATAAACTTTATAGTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VPFILASDTLPK*TVTLNKLYSLL Trigger: CAAGAGACTATAAAGTTTATTTAGGGTCACGGTCCATTTGGGGAGTGTGTCACTTGCCAGAATAAAGGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTCAGCCTTGTATGAGTaGGTGAGCATTGTGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: TKNRYTLIPERRLKANIHSALYE*VSIVKM Trigger: CATTTTCACAATGCTCACCAACTCATACAAGGCTGA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | AACAAAGCTGATTCTCTTAGTACCATTCCTGGGCACTaGGAAGGACATAAGTTCACAAGTGCAACTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NKADSLSTIPGH*EGHKFTSATVN Trigger: ATTCACAGTTGCACTTGTGAACTTATGTCCTTCTCAGTGCCCAGGAATGGTACTAAGAGAATCAGCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | ACTGGTTTGCCTTATACTATATTAGGTTCTAGTGGATaGACACTGGGGACTGAGCAGAGACATAAAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGLPYTILGSSG*TLGTEQRHKES Trigger: GCTTTCTTTATGTCTCTGCTCAGTCCCCAGTGTTCATCCACTAGAACCTAATATAGTATAAGGCAAACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CCA 72 bp | AAACAAATGATGCAAACCCAGAGTTGTTCTGGCCTCTaGAGTTATCCCTTTAACAACCTATCATTGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KQMMQTQSCSGL*SYPFNNLSLLQ Trigger: CTGTAGCAATGATAGGTTGTTAAAGGGATAACTCCAGAGGCCAGAACAACTCTGGGTTTGCATCATTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | ACACTATGGTACAGTTTATTCCTTTTGACACTCTTCTaGAACAAGGGACTAAAGGGTCTGCCATGTCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TLWYSLFLLTLF*NKGLKGLPCLV Trigger: TACTAGACATGGCAGACCCTTTAGTCCCTTGTTTCAGAAGAGTGTCAAAAGGAATAAACTGTACCATAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | CTCTGGTTTACTTCATATTTGTGGATCCCCACCTCTTaGGTATTTGTGTGTGTGTGTGTGTGTTTACATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWFTSYLWIPTS*VFVCVCVCLHV Trigger: AACATGTAAACACACACACACACACACAAATACTCAAGAGGTGGGGATCCACAAATATGAAGTAAACCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | ACTACTCGTAAAATCAAACTTGATACAACCCATTCATaGGCAATACTGGCTAAGCAGGGAGACTTTAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: TTRKIKLDTTHS*AILAKQGDFRS Trigger: AGATCTAAAGTCTCCCTGCTTAGCCAGTATTGCTCATGAATGGGTTGTATCAAGTTTGATTTTACGAGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATACTGTAAAAATAGACTaGTTTTCTCCAGAGGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNTVKID*FSPEDL Trigger: GAGGTCCTCTGGAGAAAACAAGTCTATTTTTACAGT...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCCAGTTTCATTCAGCTTaGGTGGTAAAGTATGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIQFHSA*VVKYVC Trigger: GCAAACATACTTTACCACCAAAGCTGAATGAAACTG...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCCAGTTTTGGTTTATCTaGGGCATGTTGCTACGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIQFWFI*GMLLRL Trigger: TAAACGTAGCAACATGCCCAAGATAAACCAAAACTG...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | ACTGAAGGCAAAGAACAACTATATTCTTCAAGCTCCTaGCCTTCCTATTTTTCTATAGCTAAGGATGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: TEGKEQLYSSSS*PSYFSIAKDEL Trigger: TAGTTCATCCTTAGCTATAGAAAAATAGGAAGGTCAGGAGCTTGAAGAATATAGTTGTTCTTTGCCTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | CTTTCTCGTTTCCTCACATATCAGCAAGCCTTATGGTaGAAGAGTAGATATTCACAGAATTATGTTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRFLTYQQALW*KSRYSQNYVSC Trigger: ACAAGAAACATAATTCTGTGAATATCTACTCTTTCACCATAAGGCTTGCTGATATGTGAGGAAACGAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | CCTATGATATACAAACTCACAAATCTTCCACACAGATaGAAAACAATCAACAAAAACCTAGCTATCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PMIYKLTNLPHR*KTINKNLAIQH Trigger: GTGTTGGATAGCTAGGTTTTTGTTGATTGTTTTTCATCTGTGTGGAAGATTTGTGAGTTTGTATATCATAGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR TCA 72 bp | ACACCACAAAACAAGCCACGGTCAGATTACTTCAAATaGTTATTACCGCAATTAACTGCTAAAAGATTACTA | + |
|
Preference number: 3 (lower is better) Translates to: TPQNKPRSDYFK*LLPQLTAKRLL Trigger: TAGTAATCTTTTAGCAGTTAATTGCGGTAATAATCATTTGAAGTAATCTGACCGTGGCTTGTTTTGTGGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTCCAGGGAAGAACTAACATGGCTGACGTGGGCAGAACCCTCTGGTTGGCACACACGATGGAGAGGTaGTCTGTTGAGACCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVQGRTNMADVGRTLWLAHTMER*SVETQV Trigger: GACCTGGGTCTCAACAGACCACCTCTCCATCGTGTG...TGCCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAGTTCTTCCCTGGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTCCAGGGAAGAACTAACATGGCTGACGTGGGCAGAACCCTCTGGTTGGCACAGCTCAGCTTTCCATaGCAAATCAACCCCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KVQGRTNMADVGRTLWLAQLSFP*QINPLP Trigger: CGGCAAGGGGTTGATTTGTCATGGAAAGCTGAGCTG...TGCCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAGTTCTTCCCTGGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGAACAGCCAGAGGAAGTaGGAACTGGGAGACGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLNSQRK*ELGDGL Trigger: AAGACCGTCTCCCAGTTCCCACTTCCTCTGGCTGTT...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGAGTCGAAGTGGTACTTaGAGTCGATGTCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLSRSGT*SRCLLL Trigger: AAGCAGAAGACATCGACTTCAAGTACCACTTCGACT...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | AAGGTCCAGGGAAGAACTAACATGGCTGACGTGGGCAGAACCCTCTGGTTGGCACGAACATGTAGCTCATaGTGCACTTGTTTTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KVQGRTNMADVGRTLWLARTCSS*CTCFPR Trigger: TCGAGGAAAACAAGTGCAGCATGAGCTACATGTTCG...TGCCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAGTTCTTCCCTGGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGGGGAAACACATACTCTaGCTAGTCAAAACGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLGKHIL*LVKTMA Trigger: TGCCATCGTTTTGACTAGCCAGAGTATGTGTTTCCC...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCGGAGAGGTGGTCTGTTaGGACCCAGGTCTTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FDIKSFTNPEACQYGQAGGEVVC*DPGLRH Trigger: GTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCC...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | ACCGATGCTACACCACGGGCTGAAACCATGCTTCAACTACGTCCCTCGAGCATTACATGTAGCTCATGCTaGACTTGTTTTCCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDATPRAETMLQLRPSSITCSSC*TCFPRS Trigger: GCTTCGAGGAAAACAAGTGCAGCATGAGCTACATGT...AATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGCGAATTGTAGTCAACTaGAATTGTTTACACCACACG | + |
|
Preference number: 4 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLRIVVN*NCLHHT Trigger: CGTGTGGTGTAAACAATTGCAGTTGACTACAATTCG...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTTAAGACAGAGGCCACAGCATCCCTTCACTAATCTGTCAGATACGACATCACGGTGCTGTGCATaGGAAGACTGTCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLRQRPQHPFTNLSDTTSRCCA*EDCLQH Trigger: ATGCTGAAGACAGTCTTCGCATGCACAGCACCGTGA...TGTCGTATCTGACAGATTAGTGAAGGGATGCTGTGGCCTCTGTCTTAAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCGATGCTACACCACGGGCTGAAACCATGCTTCAACTACGTCCCTCGAGCATTTTAACGTCACCTTCCTaGAAGACAGTCCAAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDATPRAETMLQLRPSSILTSPS*KTVQRK Trigger: TTTCCTTTGGACTGTCTTCCAGGAAGGTGACGTTAA...AATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGAAGTTGCATAACGCATaGAACACAAGAGGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLKLHNA*NTRGMI Trigger: GATCATTCCTCTTGTGTTCCATGCGTTATGCAACTT...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | ACCGATGCTACACCACGGGCTGAAACCATGCTTCAACTACGTCCCTCGAGCATTTGGAAGTGCTGTTTATaGAGCCAAAAATCCAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDATPRAETMLQLRPSSIWKCCL*SQKSNY Trigger: ATAGTTGGATTTTTGGCTGCATAAACAGCACTTCCA...AATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCAACAAGGCCACCCATTaGGTGACCAATTATTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FDIKSFTNPEACQYGQAGNKATH*VTNYCH Trigger: GTGGCAATAATTGGTCACTCAATGGGTGGCCTTGTT...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTTAAGACAGAGGCCACAGCATCCCTTCACTAATCTGTCAGATACGACAATGGAACCTGTGCGATaGTTAGTGAATCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRQRPQHPFTNLSDTTMEPVR*LVNLHR Trigger: CCTATGAAGATTCACTAACCATCGCACAGGTTCCAT...TGTCGTATCTGACAGATTAGTGAAGGGATGCTGTGGCCTCTGTCTTAAGGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CAA 72 bp | TCGTTCAGAGTGCTTGCTCTTCTGGAGGACCTGAGTTaGGTTCCTAGTATTGATATCCAGCAATTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: SFRVLALLEDLS*VPSIDIQQFTT Trigger: GGTTGTGAATTGCTGGATATCAATACTAGGAACCAAACTCAGGTCCTCCAGAAGAGCAAGCACTCTGAACGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTCGCCAGAAACACCATaGAGACATAGAACGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHSPETP*RHRTPD Trigger: ATCTGGCGTTCTATGTCTTCATGGTGTTTCTGGCGA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACGTTTACACCACACGATaGAGAGGTGGTCTGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHVYTTR*RGGLLR Trigger: TCTCAACAGACCACCTCTCCATCGTGTGGTGTAAAC...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | TTTGACATAAAATCTTTCACCAATCCTGAAGCTTGCCAATATGGCCAGGCTGGCTGCCAGGGGTTTGCATaGGTCAGGACTAAGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FDIKSFTNPEACQYGQAGCQGFA*VRTKFK Trigger: TTTAAACTTAGTCCTGACCCATGCAAACCCCTGGCA...GCCAGCCTGGCCATATTGGCAAGCTTCAGGATTGGTGAAAGATTTTATGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACGGAACACAAGAGGAATaGTCACAAAACACGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDGTQEE*SQNTGP Trigger: GGGTCCCGTGTTTTGTGATCATTCCTCTTGTGTTCC...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCATTGTATCCAGCATGGTaGTCTGACAATAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKKHHREGFNCSNQTSTPLYPAW*SDNRHE Trigger: CTCATGCCTATTGTCAGAGCACCATGCTGGATACAA...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCAGAAGTATGGCAAGTaGTCCACAAGTTGTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHQKYGK*STSCPT Trigger: AGTTGGACAACTTGTGGAGCACTTGCCATACTTCTG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATCCCCTTGCCGGCACATaGAAGTGCTGTTTATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNPLAGT*KCCLCS Trigger: GCTGCATAAACAGCACTTCCATGTGCCGGCAAGGGG...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTCAGAGAAATGTCTGTaGAAGATGGAACCTGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHSEKCL*KMEPVR Trigger: TCGCACAGGTTCCATCTTCCACAGACATTTCTCTGA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACAGGCCACCCATTGAGTaGCCAATTATTGCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDRPPIE*PIIATL Trigger: AAGTGTGGCAATAATTGGTCACTCAATGGGTGGCCT...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTTCTGCTTTCCTAAGTaGAATAGAGCCGATAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHFCFPK*NRADRS Trigger: CGATCTATCGGCTCTATTGCACTTAGGAAAGCAGAA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACGCTTCCACCATACAATaGCACCAGTTCTTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHASTIQ*HQFFIE Trigger: TTCAATGAAGAACTGGTGGCATTGTATGGTGGAAGC...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTGAAGAAGTCGAAGTaGTACTTGAAGTCGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHLKKSK*YLKSMS Trigger: AGACATCGACTTCAAGTACCACTTCGACTTCTTCAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCAGAGAATCGCTATAGCTaGAATAAGGAGAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKKHHREGFNCSNQTSTPENRYS*NKEKCQ Trigger: CTGGCATTTCTCCTTATTCCAGCTATAGCGATTCTC...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CACATCTCCAGCAAAGTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTGGGACCCTGTATAAGTaGGAGGAGCCAAAAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: HISSKVRADTFLLRYVSVGTLYK*EEPKAI Trigger: GATTGCTTTTGGCTCCTCCCACTTATACAGGGTCCC...AACACTTACATATCTAAGTAGGAATGTATCTGCTCTAACTTTGCTGGAGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACAACTTGGTCTGCTTCTaGAGGCTTCCACCATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDNLVCF*RLPPYN Trigger: ATTGTATGGTGGAAGCCTTCAGAAGCAGACCAAGTT...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAAGGGAGCTCTATTTTCTaGTACTCGGGGTACTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKGSSIF*YSGYSN Trigger: GTTCGAGTACCCCGAGTACCAGAAAATAGAGCTCCC...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCAACAGATAAGGCACTaGTGTAATGGCTCAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHQQIRH*CNGSIL Trigger: CAAAATTGAGCCATTACACCAGTGCCTTATCTGTTG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CACATCTCCAGCAAAGTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTCCACATAGGACCATCTaGACACTTTTACTGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: HISSKVRADTFLLRYVSVPHRTI*TLLLEP Trigger: GGGTTCCAGTAAAAGTGTCCAGATGGTCCTATGTGG...AACACTTACATATCTAAGTAGGAATGTATCTGCTCTAACTTTGCTGGAGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACTATTTGTATCCAGCATaGTGCTCTGACAATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHYLYPA*CSDNRH Trigger: ATGCCTATTGTCAGAGCACCATGCTGGATACAAATA...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAATTTCAGTGTAAGCAATaGTCTGGCAACAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKFQCKQ*SGNKAT Trigger: GGTGGCCTTGTTGCCAGAGCATTGCTTACACTGAAA...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCTGGAATAAGGAGAAATaGCAGGGGTTTGCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLRDTKVNVGPLVLKTFIWNKEK*QGFAWV Trigger: GACCCATGCAAACCCCTGGCATTTCTCCTTATTCCA...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTTTGTCAGTTTCTTTaGGAGCTCTATTTTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHLCQFL*ELYFLV Trigger: TACCAGAAAATAGAGCTCCCAAAGAAACTGACAAAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTCAAACTGTTTAGCTaGGTGTCTTATAAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHLKLFS*VSYKMV Trigger: CACCATTTTATAAGACACCCAGCTAAACAGTTTGAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACACTTCCGTGGACAGATaGCACATAGACAACAATATG | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDTSVDR*HIDNNM Trigger: CATATTGTTGTCTATGTGCCATCTGTCCACGGAAGT...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR GCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACGAAGTCGATGTCTTCTaGTTTCCTAAGTGCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDEVDVF*FPKCNR Trigger: TCTATTGCACTTAGGAAAGCAGAAGACATCGACTTC...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCACTCGTGTACAAACTTaGTCTGCTTCTGAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLRDTKVNVGPLVLKTFITRVQT*SASEGF Trigger: GAAGCCTTCAGAAGCAGACCAAGTTTGTACACGAGT...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCAACTTTGTATGGTTTaGCTTCTTTATCCAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: TKNRYTLIPERRLKANIHQLCMV*LLYPIW Trigger: CCATATTGGATAAAGAAGCCAAACCATACAAAGTTG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAATTTACTGAAACAGTGTaGGTGTTTCCGAGAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKFTETV*VFPRIA Trigger: AGCGATTCTCGGAAACACTCACACTGTTTCAGTAAA...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATATGGCTGTCATTTTCTaGCTGAGCAACATGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNMAVIF*LSNMKL Trigger: AAGCTTCATGTTGCTCAGCCAGAAAATGACAGCCAT...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | AGACAATCAGCCTTGTATGAGTTGGTGAGCATTGTGAAAATGTGTCATATTGACCTGTCCAAGTATTTGTaGGAAGGAAGTCTTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSALYELVSIVKMCHIDLSKYL*EGSLNC Trigger: ACAATTAAGACTTCCTTCCCACAAATACTTGGACAG...GTCAATATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATGATAAGACAGAAGTATaGCAAGTGCTCCACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNDKTEV*QVLHKL Trigger: CAACTTGTGGAGCACTTGCCATACTTCTGTCTTATC...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| 3UTR CAA 72 bp | AAAATGTACAGGGACTTGATAGAAAGACAATCAGCCTaGTATGAGTTGGTGAGCATTGTGAAAATGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMYRDLIERQSA*YELVSIVKMCH Trigger: ATGACACATTTTCACAATGCTCACCAACTCATACAAGGCTGATTGTCTTTCTATCAAGTCCCTGTACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR TCA 90 bp | AGGAAACCAGACACAAAAGAACACAGAACAACACACTGTTCTAAATCTTTGAAATTTACTGGACTTTACTaGAACAGTGTGAGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKPDTKEHRTTHCSKSLKFTGLY*NSVSVS Trigger: GGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAA...TTTCAAAGATTTAGAACAGTGTGTTGTTCTGTGTTCTTTTGTGTCTGGTTTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CACATCTCCAGCAAAGTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTTTAGGTCAGAAATTATaGACGGATTTTCCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HISSKVRADTFLLRYVSVLGQKL*TDFPQT Trigger: AGTTTGAGGAAAATCCGTCCATAATTTCTGACCTAA...AACACTTACATATCTAAGTAGGAATGTATCTGCTCTAACTTTGCTGGAGATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCTCTTCAGCAATTTACTaGACTTTACTGAAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRDTKVNVGPLVLKTFISSAIY*TLLKQC Trigger: ACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGA...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 90 bp | TGGAACACAAGAGGAATGATCACAAAACACGGGACCCTGTATAAGTaGGAGGAGCCAAAAGCAATCACGCCAACAGCCAGAGGAAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WNTRGMITKHGTLYK*EEPKAITPTARGSG Trigger: CCCACTTCCTCTGGCTGTTGGCGTGATTGCTTTTGGCTCCTCCCACTTATACAGGGTCCCGTGTTTTGTGATCATTCCTCTTGTGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAGGGAAGAACTAACATGGCTGACGTGGGCAGAACCCTCTGGTTGGCAGCCACCAGTTCTTCATaGAAGTTGACACTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVQGRTNMADVGRTLWLAATSSS*KLTLKK Trigger: CTTCTTCAGTGTCAACTTCAATGAAGAACTGGTGGC...TGCCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAGTTCTTCCCTGGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 90 bp | GAGGAGCCAAAAGCAATCACGCCAACAGCCAGAGGAAGTGGGAACTaGGAGACGGTCTTCAGCAATTTACTGGACTTTACTGAAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EEPKAITPTARGSGN*ETVFSNLLDFTETV Trigger: CACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCAGTTCCCACTTCCTCTGGCTGTTGGCGTGATTGCTTTTGGCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGGCTTTGTCAGTTTCTTaGGGAGCTCTATTTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLALSVS*GALFSG Trigger: ACCAGAAAATAGAGCTCCCAAAGAAACTGACAAAGC...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAGGGAAGAACTAACATGGCTGACGTGGGCAGAACCCTCTGGTTGGCAGTCAAAGGGAGAATTTaGTGTTCTTCAGCGTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVQGRTNMADVGRTLWLAVKGRI*CSSAYD Trigger: ATCGTACGCTGAAGAACACAAAATTCTCCCTTTGAC...TGCCAACCAGAGGGTTCTGCCCACGTCAGCCATGTTAGTTCTTCCCTGGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | ATGCTGAGCAGCACAACCCACGTCAGCAAGTTAATCACGGTGCTGTaGATGCGAAGACTGTCTTCAGCATCATTAGCACATAAGCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MLSSTTHVSKLITVL*MRRLSSASLAHKRR Trigger: TCTTCGCTTATGTGCTAATGATGCTGAAGACAGTCTTCGCATGCACAGCACCGTGATTAACTTGCTGACGTGGGTTGTGCTGCTCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | ACCGATGCTACACCACGGGCTGAAACCATGCTTCAACTACGTCCCTCGAGCATTCACTTGCTGACCACGTaGACTTTAAAAGCTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TDATPRAETMLQLRPSSIHLLTT*TLKAWY Trigger: ATACCAAGCTTTTAAAGTCAACGTGGTCAGCAAGTG...AATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTTAAGACAGAGGCCACAGCATCCCTTCACTAATCTGTCAGATACGACAAGAAATGCCAGGGGTTaGCATGGGTCAGGACTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESLRQRPQHPFTNLSDTTRNARG*HGSGLS Trigger: ACTTAGTCCTGACCCATGCAAACCCCTGGCATTTCT...TGTCGTATCTGACAGATTAGTGAAGGGATGCTGTGGCCTCTGTCTTAAGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | ACCGATGCTACACCACGGGCTGAAACCATGCTTCAACTACGTCCCTCGAGCATTAGTTCTTCATTGAAGTaGACACTGAAGAAGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDATPRAETMLQLRPSSISSSLK*TLKKSK Trigger: CTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACT...AATGCTCGAGGGACGTAGTTGAAGCATGGTTTCAGCCCGTGGTGTAGCATCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTCCAGAGGACCTCACTGTTCCTGGAGGTGGCGCTGTACTGTGTCACTGACAAATGGGTCAACTTaGTATGGTTTGGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSRGPHCSWRWRCTVSLTNGST*YGLASL Trigger: TAAAGAAGCCAAACCATACAAAGTTGACCCATTTGT...CAGTGACACAGTACAGCGCCACCTCCAGGAACAGTGAGGTCCTCTGGAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | CTCGTGTACAAACTTGGTCTGCTTCTGAAGGCTTCCACCATACAATaGCACCAGTTCTTCATTGAAGTTGACACTGAAGAAGTCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVYKLGLLLKASTIQ*HQFFIEVDTEEVEV Trigger: CACTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACTGGTGGCATTGTATGGTGGAAGCCTTCAGAAGCAGACCAAGTTTGTACACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 90 bp | TGGGAGACGGTCTTCAGCAATTTACTGGACTTTACTGAAACAGTGTaGGTGTTTCCGAGAATCGCTATAGCTGGAATAAGGAGAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WETVFSNLLDFTETV*VFPRIAIAGIRRNA Trigger: GGCATTTCTCCTTATTCCAGCTATAGCGATTCTCGGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 90 bp | AAGTGGGAACTGGGAGACGGTCTTCAGCAATTTACTGGACTTTACTaGAACAGTGTGAGTGTTTCCGAGAATCGCTATAGCTGGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KWELGDGLQQFTGLY*NSVSVSENRYSWNK Trigger: CTTATTCCAGCTATAGCGATTCTCGGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCAGTTCCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | AGTTCAGCAGGTCTTTTCAGAGCTAGCCACAATGAAGAAAGAAGCTaGACAGATGTAGAAGAGAGTAGACCACTCCAGTATGCAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: SSAGLFRASHNEERS*TDVEESRPLQYAVH Trigger: ATGTACTGCATACTGGAGTGGTCTACTCTCTTCTACATCTGTGCAGCTTCTTTCTTCATTGTGGCTAGCTCTGAAAAGACCTGCTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTTAAGACAGAGGCCACAGCATCCCTTCACTAATCTGTCAGATACGACATACCTGTCCAAGTATTaGTGGGAAGGAAGTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ESLRQRPQHPFTNLSDTTYLSKY*WEGSLN Trigger: ATTAAGACTTCCTTCCCACAAATACTTGGACAGGTA...TGTCGTATCTGACAGATTAGTGAAGGGATGCTGTGGCCTCTGTCTTAAGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 90 bp | TTGAGAATCGCTTTAATGCACTCGTGTACAAACTTGGTCTGCTTCTaGAGGCTTCCACCATACAATGCCACCAGTTCTTCATTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRIALMHSCTNLVCF*RLPPYNATSSSLKL Trigger: CAACTTCAATGAAGAACTGGTGGCATTGTATGGTGGAAGCCTTCAGAAGCAGACCAAGTTTGTACACGAGTGCATTAAAGCGATTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | GAAGTCGAAGTGGTACTTGAAGTCGATGTCTTCTGCTTTCCTAAGTaGAATAGAGCCGATAGATCGAACTTGCTTATAGCTTCCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: EVEVVLEVDVFCFPK*NRADRSNLLIASSI Trigger: AATGCTGGAAGCTATAAGCAAGTTCGATCTATCGGCTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACATGCTGGATAACGCTTaGTCAGTTTCTTTGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TKNRYTLIPERRLKANIHMLDNA*SVSLGA Trigger: AGCTCCCAAAGAAACTGACAAAGCGTTATCCAGCAT...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAATCGCTACACGTTAATACCTGAGCGGAGACTGAAGGCAAATATTCACCTGGTTATTTCTTCTTaGCTTCCAGTGCACTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TKNRYTLIPERRLKANIHLVISS*LPVHLL Trigger: CAGCAAGTGCACTGGAAGCAAAGAAGAAATAACCAG...GTGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAACGTGTAGCGATTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 90 bp | AAAATTTTTCAGTGTAAGCAATGCTCTGGCAACAAGGCCACCCATTaGGTGACCAATTATTGCCACACTTGTAGGAGCAAATTCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KIFQCKQCSGNKATH*VTNYCHTCRSKFLT Trigger: GGTCAAGAATTTGCTCCTACAAGTGTGGCAATAATTGGTCACTCAATGGGTGGCCTTGTTGCCAGAGCATTGCTTACACTGAAAAATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 90 bp | CCAACTCACTATGAGAAAGACAACTGTCAAAACAGGCAAGTCTGGTaGCATCACCTTGATATCTTTAGGAAGTTCAGCAGGTCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTHYEKDNCQNRQVW*HHLDIFRKFSRSFQ Trigger: CTGAAAAGACCTGCTGAACTTCCTAAAGATATCAAGGTGATGTCACCAGACTTGCCTGTTTTGACAGTTGTCTTTCTCATAGTGAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | GTTGACACTGAAGAAGTCGAAGTGGTACTTGAAGTCGATGTCTTCTaGTTTCCTAAGTGCAATAGAGCCGATAGATCGAACTTGCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: VDTEEVEVVLEVDVF*FPKCNRADRSNLLI Trigger: TATAAGCAAGTTCGATCTATCGGCTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | AGTGTGAGTGTTTCCGAGAATCGCTATAGCTGGAATAAGGAGAAATaGCAGGGGTTTGCATGGGTCAGGACTAAGTTTAAAATAATACCT | + |
|
Preference number: 5 (lower is better) Translates to: SVSVSENRYSWNKEK*QGFAWVRTKFKIIP Trigger: AGGTATTATTTTAAACTTAGTCCTGACCCATGCAAACCCCTGGCATTTCTCCTTATTCCAGCTATAGCGATTCTCGGAAACACTCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 90 bp | AATGCCACCAGTTCTTCATTGAAGTTGACACTGAAGAAGTCGAAGTaGTACTTGAAGTCGATGTCTTCTGCTTTCCTAAGTGCAATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NATSSSLKLTLKKSK*YLKSMSSAFLSAIE Trigger: CTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACTGGTGGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | CAAAAGAAACACCACAGGGAAGGTTTCAACTGTAGTAACCAGACATCTACACCATGTAGTATAGGCCGTTaGTATTTAACGTCACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKKHHREGFNCSNQTSTPCSIGR*YLTSPS Trigger: GGAAGGTGACGTTAAATACAAACGGCCTATACTACA...TGGTGTAGATGTCTGGTTACTACAGTTGAAACCTTCCCTGTGGTGTTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | CACATCTCCAGCAAAGTTAGAGCAGATACATTCCTACTTAGATATGTAAGTGTTCAACAAGGCCACCCATaGAGTGACCAATTATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HISSKVRADTFLLRYVSVQQGHP*SDQLLP Trigger: TGGCAATAATTGGTCACTCAATGGGTGGCCTTGTTG...AACACTTACATATCTAAGTAGGAATGTATCTGCTCTAACTTTGCTGGAGATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 90 bp | AACAACCTTAAACACATAGTACAGATAAGACAGAAGTATGGCAAGTaGTCCACAAGTTGTCCAACTCACTATGAGAAAGACAACTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NNLKHIVQIRQKYGK*STSCPTHYEKDNCQ Trigger: TTGACAGTTGTCTTTCTCATAGTGAGTTGGACAACTTGTGGAGCACTTGCCATACTTCTGTCTTATCTGTACTATGTGTTTAAGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTAAGGGATACTAAAGTAAATGTGGGTCCATTGGTACTTAAAACTTTTATCTGTAGTCAACTGCAATaGTTTACACCACACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QLRDTKVNVGPLVLKTFICSQLQ*FTPHDG Trigger: TCCATCGTGTGGTGTAAACAATTGCAGTTGACTACA...GATAAAAGTTTTAAGTACCAATGGACCCACATTTACTTTAGTATCCCTTAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATCAAAAATCCAACTATTaGTATCCAGCATGGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNQKSNY*YPAWCS Trigger: AGAGCACCATGCTGGATACAAATAGTTGGATTTTTG...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTCTACATTTACTTTATCTGGTAAAGAAGATTTCCCGGAAGGAAGTAATTCTGGTGACATCACCTaGATATCTTTAGGAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSTFTLSGKEDFPEGSNSGDIT*ISLGSS Trigger: TGAACTTCCTAAAGATATCAAGGTGATGTCACCAGA...ATTACTTCCTTCCGGGAAATCTTCTTTACCAGATAAAGTAAATGTAGAACTCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | GGAGCCAAAAGCAATCACGCCAACAGCCAGAGGAAGTaGGAACTGGGAGACGGTCTTCAGCAATTTACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAKSNHANSQRK*ELGDGLQQFTG Trigger: TCCAGTAAATTGCTGAAGACCGTCTCCCAGTTCCCACTTCCTCTGGCTGTTGGCGTGATTGCTTTTGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | TCTGGTACTCGGGGTACTCGAACATGTAGCTCATGCTaGACTTGTTTTCCTCGAAGCCGAAGAAGACATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGTRGTRTCSSC*TCFPRSRRRHP Trigger: GGGATGTCTTCTTCGGCTTCGAGGAAAACAAGTGCAGCATGAGCTACATGTTCGAGTACCCCGAGTACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | GTCAACTGCAATTGTTTACACCACACGATGGAGAGGTaGTCTGTTGAGACCCAGGTCTTAGGCACTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VNCNCLHHTMER*SVETQVLGTAE Trigger: CTCAGCAGTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCCATCGTGTGGTGTAAACAATTGCAGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | AGAGGAATGATCACAAAACACGGGACCCTGTATAAGTaGGAGGAGCCAAAAGCAATCACGCCAACAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RGMITKHGTLYK*EEPKAITPTAR Trigger: TCTGGCTGTTGGCGTGATTGCTTTTGGCTCCTCCCACTTATACAGGGTCCCGTGTTTTGTGATCATTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | AGCACAACCCACGTCAGCAAGTTAATCACGGTGCTGTaGATGCGAAGACTGTCTTCAGCATCATTAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: STTHVSKLITVL*MRRLSSASLAH Trigger: ATGTGCTAATGATGCTGAAGACAGTCTTCGCATGCACAGCACCGTGATTAACTTGCTGACGTGGGTTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | AAAGCAATCACGCCAACAGCCAGAGGAAGTGGGAACTaGGAGACGGTCTTCAGCAATTTACTGGACTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: KAITPTARGSGN*ETVFSNLLDFT Trigger: AGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCAGTTCCCACTTCCTCTGGCTGTTGGCGTGATTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 72 bp | CAGTGTAAGCAATGCTCTGGCAACAAGGCCACCCATTaGGTGACCAATTATTGCCACACTTGTAGGAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QCKQCSGNKATH*VTNYCHTCRSK Trigger: TTTGCTCCTACAAGTGTGGCAATAATTGGTCACTCAATGGGTGGCCTTGTTGCCAGAGCATTGCTTACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CAA 90 bp | CTGCTGAGCTCACAACAGATAAGGCACTGGTGTAATGGCTCAATTTaGGTAGAAAAGTCAGTCCTGAACGAACTTGGTAATCCCGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSQQIRHWCNGSI*VEKSVLNELGNPGI Trigger: GATTCCGGGATTACCAAGTTCGTTCAGGACTGACTTTTCTACCAAAATTGAGCCATTACACCAGTGCCTTATCTGTTGTGAGCTCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 72 bp | GCTTTAATGCACTCGTGTACAAACTTGGTCTGCTTCTaGAGGCTTCCACCATACAATGCCACCAGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALMHSCTNLVCF*RLPPYNATSSS Trigger: TGAAGAACTGGTGGCATTGTATGGTGGAAGCCTTCAGAAGCAGACCAAGTTTGTACACGAGTGCATTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 72 bp | GTAAGCAATGCTCTGGCAACAAGGCCACCCATTGAGTaGCCAATTATTGCCACACTTGTAGGAGCAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSNALATRPPIE*PIIATLVGANS Trigger: AGAATTTGCTCCTACAAGTGTGGCAATAATTGGTCACTCAATGGGTGGCCTTGTTGCCAGAGCATTGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS TCA 72 bp | CTGGGAGACGGTCTTCAGCAATTTACTGGACTTTACTaGAACAGTGTGAGTGTTTCCGAGAATCGCTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDGLQQFTGLY*NSVSVSENRYS Trigger: GCTATAGCGATTCTCGGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | AATCAACCCCTTGCCGGCACATGGAAGTGCTGTTTATaGAGCCAAAAATCCAACTATTTGTATCCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: NQPLAGTWKCCL*SQKSNYLYPAW Trigger: CCATGCTGGATACAAATAGTTGGATTTTTGGCTGCATAAACAGCACTTCCATGTGCCGGCAAGGGGTTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | GAAGTGGGAACTGGGAGACGGTCTTCAGCAATTTACTaGACTTTACTGAAACAGTGTGAGTGTTTCCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EVGTGRRSSAIY*TLLKQCECFRE Trigger: TTCTCGGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGACCGTCTCCCAGTTCCCACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | GAAGAAGTCGAAGTGGTACTTGAAGTCGATGTCTTCTaGTTTCCTAAGTGCAATAGAGCCGATAGATCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EEVEVVLEVDVF*FPKCNRADRSN Trigger: GTTCGATCTATCGGCTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | GTTTCCGAGAATCGCTATAGCTGGAATAAGGAGAAATaGCAGGGGTTTGCATGGGTCAGGACTAAGTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: VSENRYSWNKEK*QGFAWVRTKFK Trigger: TTTAAACTTAGTCCTGACCCATGCAAACCCCTGGCATTTCTCCTTATTCCAGCTATAGCGATTCTCGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CCA 72 bp | CCAGTGCACTTGCTGACCACGTTGACTTTAAAAGCTTaGTATATCTGTCCAAAGTTCAGCAGCTCTATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PVHLLTTLTLKA*YICPKFSSSML Trigger: CAACATAGAGCTGCTGAACTTTGGACAGATATACCAAGCTTTTAAAGTCAACGTGGTCAGCAAGTGCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CAA 72 bp | CTTCCACCATACAATGCCACCAGTTCTTCATTGAAGTaGACACTGAAGAAGTCGAAGTGGTACTTGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LPPYNATSSSLK*TLKKSKWYLKS Trigger: CGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACTGGTGGCATTGTATGGTGGAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CAA 72 bp | GGCTCCACCATGAAACCTAACTACCTGTCCAAGTATTaGTGGGAAGGAAGTCTTAATTGTCACCTCATACTG | + |
|
Preference number: 6 (lower is better) Translates to: GSTMKPNYLSKY*WEGSLNCHLIL Trigger: CAGTATGAGGTGACAATTAAGACTTCCTTCCCACAAATACTTGGACAGGTAGTTAGGTTTCATGGTGGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | GTGGTACTTGAAGTCGATGTCTTCTGCTTTCCTAAGTaGAATAGAGCCGATAGATCGAACTTGCTTATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVLEVDVFCFPK*NRADRSNLLIA Trigger: AGCTATAAGCAAGTTCGATCTATCGGCTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS GCA 72 bp | AAACTTGGTCTGCTTCTGAAGGCTTCCACCATACAATaGCACCAGTTCTTCATTGAAGTTGACACTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KLGLLLKASTIQ*HQFFIEVDTEE Trigger: TTCTTCAGTGTCAACTTCAATGAAGAACTGGTGGCATTGTATGGTGGAAGCCTTCAGAAGCAGACCAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CAA 72 bp | ATAACTCATATGCTGGATAACGCTTTGTCAGTTTCTTaGGGAGCTCTATTTTCTGGTACTCGGGGTACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ITHMLDNALSVS*GALFSGTRGTR Trigger: TCGAGTACCCCGAGTACCAGAAAATAGAGCTCCCAAAGAAACTGACAAAGCGTTATCCAGCATATGAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
||
| CDS CAA 72 bp | CAAAGTTCAGCAGCTCTATGTTGTAGTATAGGCCGTTaGTATTTAACGTCACCTTCCTGGAAGACAGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSSAALCCSIGR*YLTSPSWKTVQ Trigger: TTGGACTGTCTTCCAGGAAGGTGACGTTAAATACAAACGGCCTATACTACAACATAGAGCTGCTGAACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 72 bp | TCCAGTGCACTTGCTGACCACGTTGACTTTAAAAGCTaGGTATATCTGTCCAAAGTTCAGCAGCTCTATGTT | + |
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Preference number: 6 (lower is better) Translates to: SSALADHVDFKS*VYLSKVQQLYV Trigger: AACATAGAGCTGCTGAACTTTGGACAGATATACCAAGCTTTTAAAGTCAACGTGGTCAGCAAGTGCACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 90 bp | CGTAAAGATATAACTCATATGCTGGATAACGCTTTGTCAGTTTCTTaGGGAGCTCTATTTTCTGGTACTCGGGGTACTCGAACATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RKDITHMLDNALSVS*GALFSGTRGTRTCS Trigger: GCTACATGTTCGAGTACCCCGAGTACCAGAAAATAGAGCTCCCAAAGAAACTGACAAAGCGTTATCCAGCATATGAGTTATATCTTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 90 bp | ACCAGTTCTTCATTGAAGTTGACACTGAAGAAGTCGAAGTGGTACTaGAAGTCGATGTCTTCTGCTTTCCTAAGTGCAATAGAGCCGATA | + |
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Preference number: 6 (lower is better) Translates to: TSSSLKLTLKKSKWY*KSMSSAFLSAIEPI Trigger: TATCGGCTCTATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS TCA 72 bp | GTCTTCAGCAATTTACTGGACTTTACTGAAACAGTGTaGGTGTTTCCGAGAATCGCTATAGCTGGAATAAGG | + |
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Preference number: 6 (lower is better) Translates to: VFSNLLDFTETV*VFPRIAIAGIR Trigger: CCTTATTCCAGCTATAGCGATTCTCGGAAACACTCACACTGTTTCAGTAAAGTCCAGTAAATTGCTGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS GCA 72 bp | TCAATAAGATCAAAGAACGCTCGAATTGTAGTCAACTaGAATTGTTTACACCACACGATGGAGAGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SIRSKNARIVVN*NCLHHTMERWS Trigger: AGACCACCTCTCCATCGTGTGGTGTAAACAATTGCAGTTGACTACAATTCGAGCGTTCTTTGATCTTATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CCA 72 bp | TCCACCATGAAACCTAACTACCTGTCCAAGTATTTGTaGGAAGGAAGTCTTAATTGTCACCTCATACTGACA | + |
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Preference number: 6 (lower is better) Translates to: STMKPNYLSKYL*EGSLNCHLILT Trigger: TGTCAGTATGAGGTGACAATTAAGACTTCCTTCCCACAAATACTTGGACAGGTAGTTAGGTTTCATGGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 90 bp | ATACTGGTTATTTCTTCTTTGCTTCCAGTGCACTTGCTGACCACGTaGACTTTAAAAGCTTGGTATATCTGTCCAAAGTTCAGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ILVISSLLPVHLLTT*TLKAWYICPKFSSS Trigger: AGAGCTGCTGAACTTTGGACAGATATACCAAGCTTTTAAAGTCAACGTGGTCAGCAAGTGCACTGGAAGCAAAGAAGAAATAACCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS GCA 72 bp | AAACACATAGTACAGATAAGACAGAAGTATGGCAAGTaGTCCACAAGTTGTCCAACTCACTATGAGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: KHIVQIRQKYGK*STSCPTHYEKD Trigger: GTCTTTCTCATAGTGAGTTGGACAACTTGTGGAGCACTTGCCATACTTCTGTCTTATCTGTACTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CCA 72 bp | AGTTCTTCATTGAAGTTGACACTGAAGAAGTCGAAGTaGTACTTGAAGTCGATGTCTTCTGCTTTCCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSSLKLTLKKSK*YLKSMSSAFLS Trigger: ACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAACTTCAATGAAGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CCA 72 bp | AAGAGAATCAAGGATACAAGAGGGAAACACATACTCTaGCTAGTCAAAACGATGGCATCTAATTCCGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: KRIKDTRGKHIL*LVKTMASNSGN Trigger: ATTACCGGAATTAGATGCCATCGTTTTGACTAGCCAGAGTATGTGTTTCCCTCTTGTATCCTTGATTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 72 bp | TCATTGAAGTTGACACTGAAGAAGTCGAAGTGGTACTaGAAGTCGATGTCTTCTGCTTTCCTAAGTGCAATA | + |
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Preference number: 6 (lower is better) Translates to: SLKLTLKKSKWY*KSMSSAFLSAI Trigger: TATTGCACTTAGGAAAGCAGAAGACATCGACTTCAAGTACCACTTCGACTTCTTCAGTGTCAACTTCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 72 bp | TCACAACAGATAAGGCACTGGTGTAATGGCTCAATTTaGGTAGAAAAGTCAGTCCTGAACGAACTTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: SQQIRHWCNGSI*VEKSVLNELGN Trigger: ATTACCAAGTTCGTTCAGGACTGACTTTTCTACCAAAATTGAGCCATTACACCAGTGCCTTATCTGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CAA 72 bp | ATTTCTTCTTTGCTTCCAGTGCACTTGCTGACCACGTaGACTTTAAAAGCTTGGTATATCTGTCCAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ISSLLPVHLLTT*TLKAWYICPKF Trigger: GAACTTTGGACAGATATACCAAGCTTTTAAAGTCAACGTGGTCAGCAAGTGCACTGGAAGCAAAGAAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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| CDS CCA 72 bp | TATAGCTGGAATAAGGAGAAATGCCAGGGGTTTGCATaGGTCAGGACTAAGTTTAAAATAATACCTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: YSWNKEKCQGFA*VRTKFKIIPKV Trigger: AACCTTAGGTATTATTTTAAACTTAGTCCTGACCCATGCAAACCCCTGGCATTTCTCCTTATTCCAGCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097739.5 |
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