Pregenerated sensors for PGAM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029500Ensembl transcript IDs: ENSMUST00000059229.16, ENSMUST00000112505.9, ENSMUST00000196381.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCCAAGGTTAACAGTAGCCAGTAGCAAACTAAGATGGAACTGTTaGACAAGGATATTTTTCTGGGTCTTTAAACATAACTCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SPRLTVASSKLRWNC*TRIFFWVFKHNSGW Trigger: CCAGCCTGAGTTATGTTTAAAGACCCAGAAAAATATCCTTGTTCAACAGTTCCATCTTAGTTTGCTACTGGCTACTGTTAACCTTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR CAA 90 bp | CTTACAGGACTGTCACCTACTTGCCTTATACAGACCACAGTCTTCTaGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LTGLSPTCLIQTTVF*QGHFFHGFYLSYRK Trigger: CTTCCTATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCTGTATAAGGCAAGTAGGTGACAGTCCTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTTGAAGCCAGCCTGGGCAATAATTAAGATTCTGTCTCAAAAAGCAAAACCACGGGGGCTAAATCTTTaGCTCCAAAGAAGCGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: SLKPAWAIIKILSQKAKPRGLNL*LQRSAY Trigger: GTAAGCGCTTCTTTGGAGGCAAAGATTTAGCCCCCG...TGGTTTTGCTTTTTGAGACAGAATCTTAATTATTGCCCAGGCTGGCTTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGAGGACAGAGAGGTACATCAAATATTCCAACTCATTGCATTGATTACAACATTTGAGACAACATaGAGCCACAGCACAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PKEDREVHQIFQLIALITTFETT*SHSTAV Trigger: CACAGCTGTGCTGTGGCTTCATGTTGTCTCAAATGT...TGTAATCAATGCAATGAGTTGGAATATTTGATGTACCTCTCTGTCCTCTTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTTGAAGCCAGCCTGGGCAATAATTAAGATTCTGTCTCAAAAAGCAAAACCAATTACAAGTACATGCTaGCTCCTCTGTCAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SLKPAWAIIKILSQKAKPITSTC*LLCQSA Trigger: CGCTGACTGACAGAGGAGGCAGCATGTACTTGTAAT...TGGTTTTGCTTTTTGAGACAGAATCTTAATTATTGCCCAGGCTGGCTTCAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR TCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAATTGCCTTCTTCAGCATaGGCCAGAACTAAAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: IFQLIALITEDAHNHFIELPSSA*ARTKAP Trigger: GGGTGCTTTAGTTCTGGCTCATGCTGAAGAAGGCAA...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR TCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAACCCAAATGTGACATTTaGGACAACATGAAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: IFQLIALITEDAHNHFIEPKCDI*DNMKPQ Trigger: CTGTGGCTTCATGTTGTCTCAAATGTCACATTTGGG...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR TCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAACTAAGATGGAACTGTTaGACAAGGATATTTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: IFQLIALITEDAHNHFIELRWNC*TRIFFW Trigger: CCAGAAAAATATCCTTGTTCAACAGTTCCATCTTAG...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR TCA 72 bp | GAACTAAAGCACCCAAATGTGACATTTGAGACAACATaGAGCCACAGCACAGCTGTGGAAGACAAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ELKHPNVTFETT*SHSTAVEDKGR Trigger: CCTTCCCTTGTCTTCCACAGCTGTGCTGTGGCTTCATGTTGTCTCAAATGTCACATTTGGGTGCTTTAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGAAGCCAGCCTGGGCAATAATTAAGATTCTGTCTCAAAAAGCAAAACCAAGGAAGCCAGCCCCTTaGTCCTTCATTCAGATGCAG | + |
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Preference number: 3 (lower is better) Translates to: SLKPAWAIIKILSQKAKPRKPAP*SFIQMQ Trigger: CTGCATCTGAATGAAGGACAAAGGGGCTGGCTTCCT...TGGTTTTGCTTTTTGAGACAGAATCTTAATTATTGCCCAGGCTGGCTTCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR CAA 90 bp | CCCAAAGAGGACAGAGAGGTACATCAAATATTCCAACTCATTGCATTGATTACACAGACCACAGTCTTCTaGCAGGGCCACTTCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PKEDREVHQIFQLIALITQTTVF*QGHFFH Trigger: ATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCTG...TGTAATCAATGCAATGAGTTGGAATATTTGATGTACCTCTCTGTCCTCTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR GCA 72 bp | TGTCACCTACTTGCCTTATACAGACCACAGTCTTCTTaGAGGGCCACTTCTTCCATGGCTTTTATCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: CHLLALYRPQSS*RATSSMAFIYH Trigger: ATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCTGTATAAGGCAAGTAGGTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR CCA 72 bp | AGGATATTTTTCTGGGTCTTTAAACATAACTCAGGCTaGATAGTAACTCCTGATCCTGCTTCTGCCTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: RIFFWVFKHNSG*IVTPDPASASQ Trigger: TTGGGAGGCAGAAGCAGGATCAGGAGTTACTATCCAGCCTGAGTTATGTTTAAAGACCCAGAAAAATATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR CAA 90 bp | ATCAGACTATCTGGAGTAAACACATCATTTCTAAATAACCTACAAGTCCAAGGTAGGAAGCCAGCCCCTTaGTCCTTCATTCAGATGCAG | + |
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Preference number: 3 (lower is better) Translates to: IRLSGVNTSFLNNLQVQGRKPAP*SFIQMQ Trigger: CTGCATCTGAATGAAGGACAAAGGGGCTGGCTTCCT...ACCTTGGACTTGTAGGTTATTTAGAAATGATGTGTTTACTCCAGATAGTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGAAGCCAGCCTGGGCAATAATTAAGATTCTGTCTCAAAAAGCAAAACCAAGGACTGTCACCTACTaGCCTTATACAGACCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLKPAWAIIKILSQKAKPRTVTY*PYTDHS Trigger: ACTGTGGTCTGTATAAGGCAAGTAGGTGACAGTCCT...TGGTTTTGCTTTTTGAGACAGAATCTTAATTATTGCCCAGGCTGGCTTCAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR-3UTR CAA 90 bp | ATCAGACTATCTGGAGTAAACACATCATTTCTAAATAACCTACAAGTCCAAGGTAGGACTGTCACCTACTaGCCTTATACAGACCACAGT | + |
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Preference number: 3 (lower is better) Translates to: IRLSGVNTSFLNNLQVQGRTVTY*PYTDHS Trigger: ACTGTGGTCTGTATAAGGCAAGTAGGTGACAGTCCT...ACCTTGGACTTGTAGGTTATTTAGAAATGATGTGTTTACTCCAGATAGTCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR CCA 72 bp | ACAAGATGGAGAAGGGTCTCAAGTTTGAAGCCAGCCTaGGCAATAATTAAGATTCTGTCTCAAAAAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TRWRRVSSLKPA*AIIKILSQKAK Trigger: TTTTGCTTTTTGAGACAGAATCTTAATTATTGCCCAGGCTGGCTTCAAACTTGAGACCCTTCTCCATCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR GCA 72 bp | AGAGGACAGAGAGGTACATCAAATATTCCAACTCATTaGATTGATTACAGAAGATGCTCACAACCACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: RGQRGTSNIPTH*IDYRRCSQPLH Trigger: ATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATATTTGATGTACCTCTCTGTCCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR TCA 72 bp | CTTCATTCAGATGCAGTAAACATAGGATCTCTTAATTaGGCTGAGAAGTTGGTTTTCAAAGCAAGAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: LHSDAVNIGSLN*AEKLVFKARNH Trigger: GTGGTTTCTTGCTTTGAAAACCAACTTCTCAGCTCAATTAAGAGATCCTATGTTTACTGCATCTGAATGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | TGCTGCCTCCTCTGTCAGTCAGCGGGGGCTAAATCTTTGCCTCCAAAGAAGCGCCCACAGGCCGCCAGCTaGAGCGCCTGCCGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: CCLLCQSAGAKSLPPKKRPQAAS*SACRKA Trigger: GGCTTTCCGGCAGGCGCTTCAGCTGGCGGCCTGTGG...GCGCTTCTTTGGAGGCAAAGATTTAGCCCCCGCTGACTGACAGAGGAGGCAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCCTCGCCTGTCCCAGTTaGTGTCCCAGACGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSLACPS*CPRRRA Trigger: GGCGCGGCGTCTGGGACACCAACTGGGACAGGCGAG...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCTCTTGTCTGGGGGCATaGACCCTGTGTCCCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSSCLGA*TLCPQG Trigger: CCCTTGGGGACACAGGGTTCATGCCCCCAGACAAGA...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCGTAGCAAGTCTGTGCTaGCTCTGGAGACACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSVASLC*LWRHLA Trigger: TGCCAGGTGTCTCCAGAGTCAGCACAGACTTGCTAC...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | TGCTGCCTCCTCTGTCAGTCAGCGGGGGCTAAATCTTTGCCTCCAAAGAAGCGCACTGGGAATGCCGGATaGGGAAGATGTGCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CCLLCQSAGAKSLPPKKRTGNAG*GRCALW Trigger: CCACAAGGCACATCTTCCTCATCCGGCATTCCCAGT...GCGCTTCTTTGGAGGCAAAGATTTAGCCCCCGCTGACTGACAGAGGAGGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | TGCTGCCTCCTCTGTCAGTCAGCGGGGGCTAAATCTTTGCCTCCAAAGAAGCGCGGTGGATGTAGTTCCTaGAGGCAGCTTCAATCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CCLLCQSAGAKSLPPKKRGGCSS*RQLQSG Trigger: CCCGGATTGAAGCTGCCTTCAGGAACTACATCCACC...GCGCTTCTTTGGAGGCAAAGATTTAGCCCCCGCTGACTGACAGAGGAGGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | GCACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGATACTGCACAGCCTCTaGCTTCCAGTGAGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: AQLWKTREGCSQATSRGQILHSL*LPVRDR Trigger: CCTGTCTCTCACTGGAAGCCAGAGGCTGTGCAGTAT...CTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | TGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCGTGCAGACATGGTACTGGGAATaGCGGATGAGGAAGATGTGC | + |
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Preference number: 4 (lower is better) Translates to: CGRQGKAVVRPPAEDSVQTWYWE*RMRKMC Trigger: GCACATCTTCCTCATCCGGCATTCCCAGTACCATGT...CTGCACGCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATACCACAGGCCGCCAGCTaGAGCGCCTGCCGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHIPQAAS*SACRKA Trigger: GGCTTTCCGGCAGGCGCTTCAGCTGGCGGCCTGTGG...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCGGAAGATGTGCCTTGTaGCCTTGGCCTTATAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSGRCAL*PWPYSD Trigger: ATCACTATAAGGCCAAGGCCACAAGGCACATCTTCC...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCCATTGGCATGGCATATaGAGATCTCATAGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSHWHGI*RSHSCP Trigger: AGGACAGCTATGAGATCTTCATATGCCATGCCAATG...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | GCACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCCTTCTGGGGGAAACTaGAACGCTCTACAAACAATA | + |
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Preference number: 4 (lower is better) Translates to: AQLWKTREGCSQATSRGQPSGGN*NALQTI Trigger: TATTGTTTGTAGAGCGTTGCAGTTTCCCCCAGAAGG...CTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCCCTTCTGGGGGAAACTaGAACGCTCTACAAACAATA | + |
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Preference number: 4 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSPSGGN*NALQTI Trigger: TATTGTTTGTAGAGCGTTGCAGTTTCCCCCAGAAGG...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATACTCGCCTGTCCCAGTTaGTGTCCCAGACGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHILACPS*CPRRRA Trigger: GGCGCGGCGTCTGGGACACCAACTGGGACAGGCGAG...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | ACAGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATACCCAAGGGTCCTGAGTaGCACACGACCATTGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: TDHSLLAGPLLPWLLSIIPKGPE*HTTIGS Trigger: CGACCCAATGGTCGTGTGGCACTCAGGACCCTTGGG...TATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATATCTTGTCTGGGGGCATaGACCCTGTGTCCCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHISCLGA*TLCPQG Trigger: CCCTTGGGGACACAGGGTTCATGCCCCCAGACAAGA...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATACCCAAGGGTCCTGAGTaGCACACGACCATTGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHIPKGPE*HTTIGS Trigger: CGACCCAATGGTCGTGTGGCACTCAGGACCCTTGGG...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | AGTTGCCTTCTTCAGCATGAGCCAGAACTAAAGCACCCAAATGTGACATTTGAGACTGGGAATGCCGGATaGGGAAGATGTGCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCLLQHEPELKHPNVTFETGNAG*GRCALW Trigger: CCACAAGGCACATCTTCCTCATCCGGCATTCCCAGT...CTCAAATGTCACATTTGGGTGCTTTAGTTCTGGCTCATGCTGAAGAAGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | AGTTGCCTTCTTCAGCATGAGCCAGAACTAAAGCACCCAAATGTGACATTTGAGAGGGAGCCATCCACATaGTACTGGGAATGCCGGATG | + |
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Preference number: 4 (lower is better) Translates to: SCLLQHEPELKHPNVTFEREPST*YWECRM Trigger: CATCCGGCATTCCCAGTACCATGTGGATGGCTCCCT...CTCAAATGTCACATTTGGGTGCTTTAGTTCTGGCTCATGCTGAAGAAGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | AGTTGCCTTCTTCAGCATGAGCCAGAACTAAAGCACCCAAATGTGACATTTGAGGAGACACCTGGCAGGTaGTTGCTGATGATGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SCLLQHEPELKHPNVTFEETPGR*LLMMSV Trigger: CACAGACATCATCAGCAAGCACCTGCCAGGTGTCTC...CTCAAATGTCACATTTGGGTGCTTTAGTTCTGGCTCATGCTGAAGAAGGCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | CAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATAGGAAGCCCGAGTAATCTTGTCTaGGGGCATGAACCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QSSCRATSSMAFIYHIGSPSNLV*GHEPCV Trigger: GACACAGGGTTCATGCCCCCAGACAAGATTACTCGG...GCTTCCTATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR TCA 90 bp | ATCTATCATATAGGAAGCCAGCCCCTTTGTCCTTCATTCAGATGCAGTAAACATGGTGGATGTAGTTCCTaGAGGCAGCTTCAATCCGGG | + |
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Preference number: 4 (lower is better) Translates to: IYHIGSQPLCPSFRCSKHGGCSS*RQLQSG Trigger: CCCGGATTGAAGCTGCCTTCAGGAACTACATCCACC...ATGTTTACTGCATCTGAATGAAGGACAAAGGGGCTGGCTTCCTATATGATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATACGGATGAGGAAGATGTaGCTTGTGGCCTTGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHIRMRKM*LVALAL Trigger: TAAGGCCAAGGCCACAAGGCACATCTTCCTCATCCG...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | CTTAGATTGCAGTATATGAAATGTAATGTCACCTGTAAACCACCATACTACCAGCTAATGGTGTCAGGGTaGGGTCCTTCTCCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LRLQYMKCNVTCKPPYYQLMVSG*GPSPGS Trigger: GCTCCCTGGAGAAGGACCGCACCCTGACACCATTAG...CTGGTAGTATGGTGGTTTACAGGTGACATTACATTTCATATACTGCAATCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | AATGGTAAAGGAGAAAACTTTCACAAAGGCCGTCTAACTCCTAAGTTGCCTTCTGAGACACCTGGCAGGTaGTTGCTGATGATGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NGKGENFHKGRLTPKLPSETPGR*LLMMSV Trigger: CACAGACATCATCAGCAAGCACCTGCCAGGTGTCTC...AGAAGGCAACTTAGGAGTTAGACGGCCTTTGTGAAAGTTTTCTCCTTTACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR CAA 72 bp | CTGTCACCTACTTGCCTTATACAGACCACAGTCTTCTaGCAGGGCCACTTCTTCCATGGCTTTTATCTATCA | + |
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Preference number: 4 (lower is better) Translates to: LSPTCLIQTTVF*QGHFFHGFYLS Trigger: TGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCTGTATAAGGCAAGTAGGTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | AGACCACAGTCTTCTTGCAGGGCCACTTCTTCCATGGCTTTTATCTATCATATAGGAAGATGTGCCTTGTaGCCTTGGCCTTATAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RPQSSCRATSSMAFIYHIGRCAL*PWPYSD Trigger: ATCACTATAAGGCCAAGGCCACAAGGCACATCTTCC...TATATGATAGATAAAAGCCATGGAAGAAGTGGCCCTGCAAGAAGACTGTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | ATCTATCATATAGGAAGCCAGCCCCTTTGTCCTTCATTCAGATGCAGTAAACATATAATACACAGCCTCTaGCTTCCAGTGAGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: IYHIGSQPLCPSFRCSKHIIHSL*LPVRDR Trigger: CCTGTCTCTCACTGGAAGCCAGAGGCTGTGTATTAT...ATGTTTACTGCATCTGAATGAAGGACAAAGGGGCTGGCTTCCTATATGATAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059229.16 |
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| CDS-3UTR GCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAACGGATGAGGAAGATGTaGCTTGTGGCCTTGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: IFQLIALITEDAHNHFIERMRKM*LVALAL Trigger: TAAGGCCAAGGCCACAAGGCACATCTTCCTCATCCG...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAAGACTCTGGAGACACCTaGCAGGTGCTTGCTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: IFQLIALITEDAHNHFIEDSGDT*QVLADD Trigger: ATCATCAGCAAGCACCTGCCAGGTGTCTCCAGAGTC...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | ATCAGACTATCTGGAGTAAACACATCATTTCTAAATAACCTACAAGTCCAAGGTGACTCTGGAGACACCTaGCAGGTGCTTGCTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: IRLSGVNTSFLNNLQVQGDSGDT*QVLADD Trigger: ATCATCAGCAAGCACCTGCCAGGTGTCTCCAGAGTC...ACCTTGGACTTGTAGGTTATTTAGAAATGATGTGTTTACTCCAGATAGTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CCA 90 bp | ATCAGACTATCTGGAGTAAACACATCATTTCTAAATAACCTACAAGTCCAAGGTCCGAGTAATCTTGTCTaGGGGCATGAACCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IRLSGVNTSFLNNLQVQGPSNLV*GHEPCV Trigger: GACACAGGGTTCATGCCCCCAGACAAGATTACTCGG...ACCTTGGACTTGTAGGTTATTTAGAAATGATGTGTTTACTCCAGATAGTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR GCA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAAACATGGTACTGGGAATaGCGGATGAGGAAGATGTGC | + |
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Preference number: 4 (lower is better) Translates to: IFQLIALITEDAHNHFIETWYWE*RMRKMC Trigger: GCACATCTTCCTCATCCGGCATTCCCAGTACCATGT...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| 3UTR CAA 72 bp | GACAGAGAGGTACATCAAATATTCCAACTCATTGCATaGATTACAGAAGATGCTCACAACCACTTCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: DREVHQIFQLIA*ITEDAHNHFIE Trigger: TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATATTTGATGTACCTCTCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS GCA 90 bp | GGCTCGCGCTCCTGTCCAGGCCGGCGGCTCGGTCGCGCGCGTGTCTaGATCCCCGCCACCTCGCGGCTTCCCTACCGCGACCGCCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: GSRSCPGRRLGRARV*IPATSRLPYRDRRE Trigger: TTCTCGGCGGTCGCGGTAGGGAAGCCGCGAGGTGGCGGGGATGCAGACACGCGCGCGACCGAGCCGCCGGCCTGGACAGGAGCGCGAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CAA 90 bp | TGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCGTGCAGAGTGCCACACGACCATaGGGTCGAATCACCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CGRQGKAVVRPPAEDSVQSATRP*GRITRW Trigger: CCACCTGGTGATTCGACCCAATGGTCGTGTGGCACT...CTGCACGCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CAA 90 bp | CACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCACACCTGGCAGGTGCTaGCTGATGATGTCTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: HSCGRQGKAVVRPPAEDSTPGRC*LMMSVV Trigger: GACCACAGACATCATCAGCAAGCACCTGCCAGGTGT...GCTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CAA 90 bp | GCACAGCTGTGGAAGACAAGGGAAGGCTGTAGTCAGGCCACCAGCAGAGGACAGCAGGACCGAGTAATCTaGTCTGGGGGCATGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: AQLWKTREGCSQATSRGQQDRVI*SGGMNP Trigger: AGGGTTCATGCCCCCAGACAAGATTACTCGGTCCTG...CTGTCCTCTGCTGGTGGCCTGACTACAGCCTTCCCTTGTCTTCCACAGCTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS CCA 90 bp | GTGGGTGATACTGCCGTTGTTGAGGGACAGGCGGAGCCAACCTTCTaGGGGAAACTGCAACGCTCTACAAACAATATAGCGGATGACATT | + |
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Preference number: 5 (lower is better) Translates to: VGDTAVVEGQAEPTF*GKLQRSTNNIADDI Trigger: AATGTCATCCGCTATATTGTTTGTAGAGCGTTGCAGTTTCCCCCAGAAGGTTGGCTCCGCCTGTCCCTCAACAACGGCAGTATCACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CAA 90 bp | GCAGGTATGGTAGTATATACATGCAATCCCAACATTTACAAGATGGAGAAGGGTACACCTGGCAGGTGCTaGCTGATGATGTCTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: AGMVVYTCNPNIYKMEKGTPGRC*LMMSVV Trigger: GACCACAGACATCATCAGCAAGCACCTGCCAGGTGT...ACCCTTCTCCATCTTGTAAATGTTGGGATTGCATGTATATACTACCATACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS-3UTR CAA 90 bp | ATATTCCAACTCATTGCATTGATTACAGAAGATGCTCACAACCACTTCATAGAAAGTGCCACACGACCATaGGGTCGAATCACCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: IFQLIALITEDAHNHFIESATRP*GRITRW Trigger: CCACCTGGTGATTCGACCCAATGGTCGTGTGGCACT...TTCTATGAAGTGGTTGTGAGCATCTTCTGTAATCAATGCAATGAGTTGGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS GCA 72 bp | TCCTGTCCAGGCCGGCGGCTCGGTCGCGCGCGTGTCTaGATCCCCGCCACCTCGCGGCTTCCCTACCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: SCPGRRLGRARV*IPATSRLPYRD Trigger: GTCGCGGTAGGGAAGCCGCGAGGTGGCGGGGATGCAGACACGCGCGCGACCGAGCCGCCGGCCTGGACAGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS CCA 72 bp | CTGAGTGCCACACGACCATTGGGTCGAATCACCAGGTaGGTGATACTGCCGTTGTTGAGGGACAGGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LSATRPLGRITR*VILPLLRDRRS Trigger: GCTCCGCCTGTCCCTCAACAACGGCAGTATCACCCACCTGGTGATTCGACCCAATGGTCGTGTGGCACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 |
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| CDS GCA 72 bp | AGCAAGTCTGTGCTGACTCTGGAGACACCTGGCAGGTaGTTGCTGATGATGTCTGTGGTCTCTACTGCACGG | + |
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Preference number: 6 (lower is better) Translates to: SKSVLTLETPGR*LLMMSVVSTAR Trigger: CCGTGCAGTAGAGACCACAGACATCATCAGCAAGCACCTGCCAGGTGTCTCCAGAGTCAGCACAGACTTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 ENSMUST00000196381.2 |
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| CDS CAA 72 bp | AAGTCTGTGCTGACTCTGGAGACACCTGGCAGGTGCTaGCTGATGATGTCTGTGGTCTCTACTGCACGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KSVLTLETPGRC*LMMSVVSTARV Trigger: GACCCGTGCAGTAGAGACCACAGACATCATCAGCAAGCACCTGCCAGGTGTCTCCAGAGTCAGCACAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059229.16 ENSMUST00000112505.9 ENSMUST00000196381.2 |
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| CDS CCA 72 bp | TTCAATCCGGGCTCCATCTTCATAATACACAGCCTCTaGCTTCCAGTGAGAGACAGGTGGATCCGGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FNPGSIFIIHSL*LPVRDRWIRFN Trigger: ATTGAACCGGATCCACCTGTCTCTCACTGGAAGCCAGAGGCTGTGTATTATGAAGATGGAGCCCGGATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059229.16 |
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