Pregenerated sensors for PGAM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020475

Ensembl transcript IDs: ENSMUST00000020768.4

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GTCCTTGAGACTTTCACAGGTAGGCAGCTCCTCAGGCTTCAAGCCTaGATAGCGGCGGTCCTTGCTGATGGAGGTGTAGTAGTTGTGTTT	+
Preference number: 5 (lower is better) Translates to: VLETFTGRQLLRLQA*IAAVLADGGVVVVF Trigger: AAACACAACTACTACACCTCCATCAGCAAGGACCGCCGCTATGCAGGCTTGAAGCCTGAGGAGCTGCCTACCTGTGAAAGTCTCAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020768.4
CDS CCA 90 bp	TTCTCACTCAGCTCTGCATCAAACCAGCCACAGAAACGGTTCTCTTaGTTCCATAAGCTCTCACCGTGGCGAACCATTACTAGGCGGTGG	+
Preference number: 5 (lower is better) Translates to: FSLSSASNQPQKRFS*FHKLSPWRTITRRW Trigger: CCACCGCCTAGTAATGGTTCGCCACGGTGAGAGCTTATGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGAGCTGAGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020768.4
CDS GCA 72 bp	CCGCTTGGCCTCCTCTGCTCCCTTCTCACTCAGCTCTaGATCAAACCAGCCACAGAAACGGTTCTCTTGGTT	+
Preference number: 6 (lower is better) Translates to: PLGLLCSLLTQL*IKPATETVLLV Trigger: AACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGAGCTGAGTGAGAAGGGAGCAGAGGAGGCCAAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020768.4
CDS GCA 72 bp	ACTTTCACAGGTAGGCAGCTCCTCAGGCTTCAAGCCTaGATAGCGGCGGTCCTTGCTGATGGAGGTGTAGTA	+
Preference number: 6 (lower is better) Translates to: TFTGRQLLRLQA*IAAVLADGGVV Trigger: TACTACACCTCCATCAGCAAGGACCGCCGCTATGCAGGCTTGAAGCCTGAGGAGCTGCCTACCTGTGAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020768.4
CDS CCA 72 bp	AGCTCTGCATCAAACCAGCCACAGAAACGGTTCTCTTaGTTCCATAAGCTCTCACCGTGGCGAACCATTACT	+
Preference number: 6 (lower is better) Translates to: SSASNQPQKRFS*FHKLSPWRTIT Trigger: AGTAATGGTTCGCCACGGTGAGAGCTTATGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020768.4

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