Pregenerated sensors for PFPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040065Ensembl transcript IDs: ENSMUST00000168148.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAAAACCCAGCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATaGCCCATGGAAGCCATCCTGGATCTGAAATGCATGTCACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: AKPSYCQVSVMQPAG*PMEAILDLKCMSQV Trigger: CACCTGTGACATGCATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGCTGGGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 90 bp | TTGAGCAAAACCCAGCTATTGCCAGGTGTCAGTCATGCAGCCTGCTaGATGCCCCATGGAAGCCATCCTGGATCTGAAATGCATGTCACA | + |
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Preference number: 1 (lower is better) Translates to: LSKTQLLPGVSHAAC*MPHGSHPGSEMHVT Trigger: TGTGACATGCATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGCTGGGTTTTGCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 90 bp | AAATTGAGCAAAACCCAGCTATTGCCAGGTGTCAGTCATGCAGCCTaGTGGATGCCCCATGGAAGCCATCCTGGATCTGAAATGCATGTC | + |
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Preference number: 1 (lower is better) Translates to: KLSKTQLLPGVSHAA*WMPHGSHPGSEMHV Trigger: GACATGCATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGCTGGGTTTTGCTCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR TCA 90 bp | GAAGACACCAGTGGCTTGTGTGGGAATGAGCATTCCGACAATGGCTaGGAACCTGGGCTTGTTTTTGCTGACTGGGTTGCAAGTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: EDTSGLCGNEHSDNG*EPGLVFADWVASFP Trigger: AGGAAAACTTGCAACCCAGTCAGCAAAAACAAGCCCAGGTTCTCAGCCATTGTCGGAATGCTCATTCCCACACAAGCCACTGGTGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 90 bp | CTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATaGAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: LHPKVLVALHPVVLS*RDSGEDTSGLCGNE Trigger: CTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 90 bp | ATCACATCAGCCCTCTTTGTAGCAGTGAAAACAAGCAAACCTAAATaGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ITSALFVAVKTSKPK*TGHDVFCLALVLGR Trigger: TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTTGCTTGTTTTCACTGCTACAAAGAGGGCTGATGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATGCCCCATGGAAGCCATCCCAACACTGGTTGAACTaGACCATCTGCATGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AIARCQSCSLLDAPWKPSQHWLN*TICMFS Trigger: TGAGAACATGCAGATGGTCCAGTTCAACCAGTGTTG...GGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATGCCCCATGGAAGCCATCCGCAGCAGACAGAAAGTaGACTTGTTCTGAACTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIARCQSCSLLDAPWKPSAADRK*TCSELC Trigger: ACAGAGTTCAGAACAAGTCCACTTTCTGTCTGCTGC...GGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATGTTCCATTCCGACAATGGCTaGGAACCTGGGCTTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: YRVLESPQHWLNWTICMFHSDNG*EPGLVF Trigger: AAAAACAAGCCCAGGTTCTCAGCCATTGTCGGAATG...GAACATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CAA 90 bp | CTTTGCCAACTTCACAATAAGAGCAGCTTCATCCCAAAGTTCTTGTaGCTCTCCACCCAGTTGTTCTTTCATGCAGAGATTCAGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LCQLHNKSSFIPKFL*LSTQLFFHAEIQVK Trigger: CTTCACCTGAATCTCTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGCTCTTATTGTGAAGTTGGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CAA 90 bp | AACCTTTGCCAACTTCACAATAAGAGCAGCTTCATCCCAAAGTTCTaGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGAGATTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NLCQLHNKSSFIPKF*LLSTQLFFHAEIQV Trigger: CACCTGAATCTCTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGCTCTTATTGTGAAGTTGGCAAAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATTTCCCCTGCCTTATTTaGACAGATCCTTTAATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SVQSFGVSTTLVELDHLHFPCLI*TDPLIP Trigger: GGGAATTAAAGGATCTGTGCAAATAAGGCAGGGGAA...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATGTTCTGCTCACAAATTaGAAAACCTTTGCCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: SVQSFGVSTTLVELDHLHVLLTN*KTFANF Trigger: GAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAAC...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGAAGTTTTCCTTCCCCTaGCTTATTTGCACAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: ISWLKETSKFLKHRSPLQKFSFP*LICTDP Trigger: AGGATCTGTGCAAATAAGGCAGGGGAAGGAAAACTT...CTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGTTTTTGAACTGGACCATCTaGATGTTCTCAGAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SWLKETSKFLKHRSPLQFLNWTI*MFSEFG Trigger: CCCAAACTCTGAGAACATGCAGATGGTCCAGTTCAA...AAACTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCTGCTCACAAATTGGAAAACCTTTGCCAACTTCACAATAAGAGCAGCTAAACCTTCTTTCGGTTaGGACTTCTGCTTTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVLLTNWKTFANFTIRAAKPSFG*DFCFSS Trigger: AGAGCTAAAGCAGAAGTCGCAACCGAAAGAAGGTTT...AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CCA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGCATGTTCTCAGAGTTTaGGTTGTCTTTAAGAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HYMMSSKVDISWLKETSKHVLRV*VVFKRL Trigger: TAGCCTCTTAAAGACAACCCAAACTCTGAGAACATG...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 72 bp | ACCCAGCTATTGCCAGGTGTCAGTCATGCAGCCTGCTaGATGCCCCATGGAAGCCATCCTGGATCTGAAATG | + |
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Preference number: 3 (lower is better) Translates to: TQLLPGVSHAAC*MPHGSHPGSEM Trigger: CATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATGCCCCATGGAAGCCATCCCATCAGTACAGAGTTTaGGAGTCTCCACAACACTGG | + |
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Preference number: 3 (lower is better) Translates to: AIARCQSCSLLDAPWKPSHQYRV*ESPQHW Trigger: CCAGTGTTGTGGAGACTCCAAAACTCTGTACTGATG...GGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 72 bp | AGCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATaGCCCATGGAAGCCATCCTGGATCTGAAATGCATG | + |
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Preference number: 3 (lower is better) Translates to: SYCQVSVMQPAG*PMEAILDLKCM Trigger: CATGCATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 72 bp | GCTGGATGCCCCATGGAAGCCATCCTGGATCTGAAATaGATGTCACAGGTGATTTTGGGTGTCTGTTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGCPMEAILDLK*MSQVILGVCSS Trigger: GCTGGAACAGACACCCAAAATCACCTGTGACATGCATTTCAGATCCAGGATGGCTTCCATGGGGCATCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR TCA 72 bp | AGTGGCTTGTGTGGGAATGAGCATTCCGACAATGGCTaGGAACCTGGGCTTGTTTTTGCTGACTGGGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLCGNEHSDNG*EPGLVFADWVA Trigger: TGCAACCCAGTCAGCAAAAACAAGCCCAGGTTCTCAGCCATTGTCGGAATGCTCATTCCCACACAAGCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCATGTTCTGCTCACAAATaGGAAAACCTTTGCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: TCSELCALQAHREMTQSSCSAHK*ENLCQL Trigger: AAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACA...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CAA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGGAAGACACCAGTGGCTaGTGTGGGAATGAGCATTCC | + |
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Preference number: 3 (lower is better) Translates to: HYMMSSKVDISWLKETSKEDTSG*CGNEHS Trigger: GGAATGCTCATTCCCACACAAGCCACTGGTGTCTTC...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGCACCACCCTTTTGCCTaGGACATTGCATGGGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: ISWLKETSKFLKHRSPLQHHPFA*DIAWEV Trigger: AACTTCCCATGCAATGTCCAAGGCAAAAGGGTGGTG...CTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 72 bp | AAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATaGAGAGATTCAGGTGAAGACACCAGTGGCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: KVLVALHPVVLS*RDSGEDTSGLC Trigger: ACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 72 bp | AACAAGGTAAATTCTAACTGTGCAGCAGACAGAAAGTaGACTTGTTCTGAACTCTGTGCCCTTCAGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: NKVNSNCAADRK*TCSELCALQAH Trigger: GTGTGCCTGAAGGGCACAGAGTTCAGAACAAGTCCACTTTCTGTCTGCTGCACAGTTAGAATTTACCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGTTTATCCCAAAGTTCTTGTaGCTCTCCACCCAGTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SWLKETSKFLKHRSPLQFIPKFL*LSTQLF Trigger: GAACAACTGGGTGGAGAGCAACAAGAACTTTGGGAT...AAACTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 72 bp | AAGATACAGGGAAGGCAAAGTGTTCTGCTCACAAATTaGAAAACCTTTGCCAACTTCACAATAAGAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KIQGRQSVLLTN*KTFANFTIRAA Trigger: AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACTTTGCCTTCCCTGTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR GCA 72 bp | ACTTCTGATGGGAAGACATTAAGGGTGAGTGCTAGTTaGAGAAAGAGAAAGGGTTATACTTTTGGTAACATG | + |
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Preference number: 3 (lower is better) Translates to: TSDGKTLRVSAS*RKRKGYTFGNM Trigger: CATGTTACCAAAAGTATAACCCTTTCTCTTTCTGCAACTAGCACTCACCCTTAATGTCTTCCCATCAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR CCA 72 bp | CTGGTTGAACTGGACCATCTGCATGTTCTCAGAGTTTaGGTTGTCTTTAAGAGGCTAAAATACAAAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: LVELDHLHVLRV*VVFKRLKYKTR Trigger: TCTTGTTTTGTATTTTAGCCTCTTAAAGACAACCCAAACTCTGAGAACATGCAGATGGTCCAGTTCAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| 3UTR TCA 72 bp | ATACTTCTTGCTGTAATAAGGGTGTATCTATTCATGTaGCTTTGTATCTGTATTCACACTTCTGATGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ILLAVIRVYLFM*LCICIHTSDGK Trigger: CTTCCCATCAGAAGTGTGAATACAGATACAAAGTCACATGAATAGATACACCCTTATTACAGCAAGAAGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATGCCCCATGGAAGCCATCCAGTTTCCACTGTCTTTaGCAGTTGCTCCACCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AIARCQSCSLLDAPWKPSSFHCL*QLLHQV Trigger: CACTTGGTGGAGCAACTGGCAAAGACAGTGGAAACT...GGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATCAGCGAGCTGTTGGCTaGAGCCCCCGGGACACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SVQSFGVSTTLVELDHLHQRAVG*SPRDTL Trigger: CAAAGTGTCCCGGGGGCTTCAGCCAACAGCTCGCTG...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCAGGTGTCAGTCATGCAGCCTGCTGGATGCCCCATGGAAGCCATCCGTGGCCAAGTTATTTTaGTACTCAAAGCCTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: AIARCQSCSLLDAPWKPSVAKLF*YSKPVS Trigger: AGAGACAGGCTTTGAGTATCAAAATAACTTGGCCAC...GGATGGCTTCCATGGGGCATCCAGCAGGCTGCATGACTGACACCTGGCAATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGGCCAGCACGGTCCACTaGCACCAGGTGGTTAATGAT | + |
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Preference number: 4 (lower is better) Translates to: AASSQSSCCSPPSCSFMQASTVH*HQVVND Trigger: ATCATTAACCACCTGGTGGCAGTGGACCGTGCTGGC...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCAATTCCTCCAATACTCTaGACCCTAGAACCGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TCSELCALQAHREMTQSSIPPIL*TLEPVL Trigger: CAGAACCGGTTCTAGGGTTCAGAGTATTGGAGGAAT...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR CCA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGATCGCAGCGAGCTGTTaGCTGAAGCCCCCGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: HYMMSSKVDISWLKETSKIAASC*LKPPGH Trigger: GTGTCCCGGGGGCTTCAGCCAACAGCTCGCTGCGAT...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATGCCTGGTCTCTCACTTaGGTGGTCTTTATCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVQSFGVSTTLVELDHLHAWSLT*VVFILW Trigger: CCAAAGGATAAAGACCACTCAAGTGAGAGACCAGGC...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGGGTTTGATAAAGAAATaGAGAGGCAAGCCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: AASSQSSCCSPPSCSFMQGLIKK*RGKPAR Trigger: CCGTGCTGGCTTGCCTCTGCATTTCTTTATCAAACC...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCAGCATTCTGGCACTTTTaGAAACCATACTCATGGATC | + |
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Preference number: 4 (lower is better) Translates to: TCSELCALQAHREMTQSSAFWHF*KPYSWI Trigger: GATCCATGAGTATGGTTTCCAAAAGTGCCAGAATGC...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGGTGGCCATCTTCGTCTaGTTTTTCTCTAGACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: AASSQSSCCSPPSCSFMQVAIFV*FFSRRS Trigger: TGACCGTCTAGAGAAAAACCAGACGAAGATGGCCAC...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGTTGCAAGTTTTCCTTCCCCTGCCTTATTTGCACAGATCCTTTAATTCCAGTTGCTCCACCAAGTaGCGTGGAAAAGCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TGLQVFLPLPYLHRSFNSSCSTK*RGKAGS Trigger: GCTTCCTGCTTTTCCACGCCACTTGGTGGAGCAACT...GGAATTAAAGGATCTGTGCAAATAAGGCAGGGGAAGGAAAACTTGCAACCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCAAGGTTGCTCTCTTTCTaGGGAATAGTAAAGACATCA | + |
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Preference number: 4 (lower is better) Translates to: TCSELCALQAHREMTQSSRLLSF*GIVKTS Trigger: TGATGTCTTTACTATTCCTCAGAAAGAGAGCAACCT...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR GCA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCAGAAGTTCACAACCTTTaGGAAAGTAAATCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TCSELCALQAHREMTQSSEVHNL*ESKSSR Trigger: TCTGCTGGATTTACTTTCGCAAAGGTTGTGAACTTC...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTTCTGAACTCTGTGCCCTTCAGGCACACAGGGAGATGACGCAGTCATCATGGAAACCATACTCATaGATCTCTTTAAGTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TCSELCALQAHREMTQSSWKPYS*ISLSAF Trigger: GAAGGCACTTAAAGAGATCCATGAGTATGGTTTCCA...TGATGACTGCGTCATCTCCCTGTGTGCCTGAAGGGCACAGAGTTCAGAACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATAGCCTGTCTCTATTTTaGAGTTCACAACCTTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHSLSLF*SSQPLR Trigger: TCGCAAAGGTTGTGAACTTCAAAATAGAGACAGGCT...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS-3UTR TCA 90 bp | ATCAGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGCTCCAAAGGGAGCGTTaGCCAGTTTACCATCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISWLKETSKFLKHRSPLQLQRER*PVYHHK Trigger: CTTGTGATGGTAAACTGGTCAACGCTCCCTTTGGAG...CTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATGAGAAACACATACCTTaGCGTTCTCAAACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHEKHIP*RSQTAS Trigger: TGAAGCTGTTTGAGAACGTCAAGGTATGTGTTTCTC...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATAGATTCAGAGCATTCTaGCACTTTTGGAAACCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHRFRAF*HFWKPY Trigger: GTATGGTTTCCAAAAGTGCCAGAATGCTCTGAATCT...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGTTCGATGGTCATCCCTaGGTAGAAGGGAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HYMMSSKVDISWLKETSKFDGHP*VEGNSS Trigger: GGAGGAATTCCCTTCTACCCAGGGATGACCATCGAA...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGCAATGCCTGTTGTCTTaGAAGTCCATTGGGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: AASSQSSCCSPPSCSFMQQCLLS*KSIGFI Trigger: AATAAACCCAATGGACTTCCAAGACAACAGGCATTG...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| 3UTR CAA 72 bp | CAACTTCACAATAAGAGCAGCTTCATCCCAAAGTTCTaGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLHNKSSFIPKF*LLSTQLFFHAE Trigger: CTCTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGCTCTTATTGTGAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTGCTCACAAATTGGAAAACCTTTGCCAACTTCACAATAAGAGCAGCTGTCAAGTCCATCACTTaGCCCATGTCCATATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTNWKTFANFTIRAAVKSIT*PMSIFL Trigger: GAGGAATATGGACATGGGGCAAGTGATGGACTTGAC...AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGTTTCCCCAAGTTGAGTTCTaGATTTGGGTTGGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLKETSKFLKHRSPLQFPQVEF*IWVGFH Trigger: GTGAAAGCCAACCCAAATGCAGAACTCAACTTGGGG...AAACTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| 3UTR CAA 72 bp | CAAGATACAGGGAAGGCAAAGTGTTCTGCTCACAAATaGGAAAACCTTTGCCAACTTCACAATAAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDTGKAKCSAHK*ENLCQLHNKSS Trigger: GCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACTTTGCCTTCCCTGTATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAATGGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGAAGACATCATCAGGGATaGTGTACTGTCCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKWTGHDVFCLALVLGRRHHQG*CTVRLL Trigger: CAGAAGACGGACAGTACATCATCCCTGATGATGTCT...TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGGTAAGTGGATTCTTCTaGTGGAAATCTAGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ISWLKETSKFLKHRSPLQVSGFF*WKSRHM Trigger: CATGTGCCTAGATTTCCATCAGAAGAATCCACTTAC...CTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGCTAAGTCTCCAGATGTaGAAGAACCATACAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYMMSSKVDISWLKETSKLSLQM*KNHTRG Trigger: ACCCCTTGTATGGTTCTTTCACATCTGGAGACTTAG...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATTTTGAAGATAGCCTGTaGCCAAGTTATTTTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHFEDSL*PSYFDT Trigger: AGTATCAAAATAACTTGGCCACAGGCTATCTTCAAA...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATAGCCATCATCTGTATTaGCTTGAAAATCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSFGVSTTLVELDHLHSHHLY*LENQSW Trigger: CCAACTTTGATTTTCAAGCCAATACAGATGATGGCT...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAATGGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGATCATCTGTATTGGCTTaGAAATCAAAGTTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKWTGHDVFCLALVLGRSSVLA*KSKLGE Trigger: CTCCCCCAACTTTGATTTTCAAGCCAATACAGATGA...TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAATGGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGATCCAAAGAGAATTCCTaGGTTTTCTGGTACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPKWTGHDVFCLALVLGRSKENS*VFWYLA Trigger: AGCCAAGTACCAGAAAACTCAGGAATTCTCTTTGGA...TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTGCTCACAAATTGGAAAACCTTTGCCAACTTCACAATAAGAGCAGCTATGGATCTCTTTAAGTaGCTTCTCCTCTTCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTNWKTFANFTIRAAMDLFK*LLLFSI Trigger: TATGCTGAAGAGGAGAAGGCACTTAAAGAGATCCAT...AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCTAAAAGAAACCAGCAAGTTCCTAAAACATCGGAGTCCTCTTCAGTTTAAAGACTCTAACTCTTaGAAAAGGAAGCAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWLKETSKFLKHRSPLQFKDSNS*KRKQCL Trigger: CAGGCATTGCTTCCTTTTCCAAGAGTTAGAGTCTTT...AAACTGAAGAGGACTCCGATGTTTTAGGAACTTGCTGGTTTCTTTTAGCCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGGATCGCAGCGAGCTGTaGGCTGAAGCCCCCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AASSQSSCCSPPSCSFMQDRSEL*AEAPGT Trigger: TGTCCCGGGGGCTTCAGCCAACAGCTCGCTGCGATC...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATAGCCCCCGGGACACTTaGGCAGAAATGATTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHSPRDT*AEMISL Trigger: TAGAGAAATCATTTCTGCCAAAGTGTCCCGGGGGCT...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGTGTCAAGTCCATCACTaGCCCCATGTCCATATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AASSQSSCCSPPSCSFMQCQVHH*PHVHIP Trigger: AGGAATATGGACATGGGGCAAGTGATGGACTTGACA...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCATGCAGAGATTCAGGTGAAGACACCAGTGGCTTGTGTGGGAATGAGCATAGCCTGGTCTCTCACTaGAGTGGTCTTTATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCRDSGEDTSGLCGNEHSLVSH*SGLYPL Trigger: CAAAGGATAAAGACCACTCAAGTGAGAGACCAGGCT...ATGCTCATTCCCACACAAGCCACTGGTGTCTTCACCTGAATCTCTGCATGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGATAGGGTTGATGCTCTaGTCAGTGAAGACTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AASSQSSCCSPPSCSFMQIGLML*SVKTPP Trigger: TGGAGGAGTCTTCACTGACAAGAGCATCAACCCTAT...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS TCA 90 bp | CTGAATATTTGGGCCCCAACTCATGATCCAGAGAAACACATACCTTaGCGTTCTCAAACAGCTTCAGAGGAAAGTAACTGGTTGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LNIWAPTHDPEKHIP*RSQTASEESNWLGT Trigger: CGTGCCCAACCAGTTACTTTCCTCTGAAGCTGTTTGAGAACGTCAAGGTATGTGTTTCTCTGGATCATGAGTTGGGGCCCAAATATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTACAGAGTTTTGGAGTCTCCACAACACTGGTTGAACTGGACCATCTGCATAGAACCGGTTCTGTTTaGAAGATAGCCTGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVQSFGVSTTLVELDHLHRTGSV*KIACGQ Trigger: TTGGCCACAGGCTATCTTCAAAACAGAACCGGTTCT...ATGCAGATGGTCCAGTTCAACCAGTGTTGTGGAGACTCCAAAACTCTGTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 90 bp | CCTCCTCCAGGTAGCACTTCCAAAACAGGTAGATTCAGAGCATTCTaGCACTTTTGGAAACCATACTCATGGATCTCTTTAAGTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPGSTSKTGRFRAF*HFWKPYSWISLSAF Trigger: GAAGGCACTTAAAGAGATCCATGAGTATGGTTTCCAAAAGTGCCAGAATGCTCTGAATCTACCTGTTTTGGAAGTGCTACCTGGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 90 bp | AGCTGGATTTGGATCCTGCACTCCATCAGGAAAGACTCTAACTCTTaGAAAAGGAAGCAATGCCTGTTGTCTTGGAAGTCCATTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWIWILHSIRKDSNS*KRKQCLLSWKSIGF Trigger: AAACCCAATGGACTTCCAAGACAACAGGCATTGCTTCCTTTTCCAAGAGTTAGAGTCTTTCCTGATGGAGTGCAGGATCCAAATCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCATCCCAAAGTTCTTGTTGCTCTCCACCCAGTTGTTCTTTCATGCAGGTGGTCTTACAGTTGTaGTATGTCAAGTCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: AASSQSSCCSPPSCSFMQVVLQL*YVKSIT Trigger: AGTGATGGACTTGACATACAACAACTGTAAGACCAC...CTGCATGAAAGAACAACTGGGTGGAGAGCAACAAGAACTTTGGGATGAAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 90 bp | ACATACCTTGACGTTCTCAAACAGCTTCAGAGGAAAGTAACTGGTTaGGCACGATGGTTCATTTGTCATAGGGTTGATGCTCTTGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TYLDVLKQLQRKVTG*ARWFICHRVDALVS Trigger: ACTGACAAGAGCATCAACCCTATGACAAATGAACCATCGTGCCCAACCAGTTACTTTCCTCTGAAGCTGTTTGAGAACGTCAAGGTATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AACTTAATGATGCAACTTTTTATCACATCAGCCCTCTTTGTAGCAGTGAAAACACACTGTCTTTGCCAGTaGCTCCACCAAGTGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLMMQLFITSALFVAVKTHCLCQ*LHQVAW Trigger: CCACGCCACTTGGTGGAGCAACTGGCAAAGACAGTG...TGTTTTCACTGCTACAAAGAGGGCTGATGTGATAAAAAGTTGCATCATTAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTTCTGCTCACAAATTGGAAAACCTTTGCCAACTTCACAATAAGAGCAGCTTCAAAGTTGGGGGAGTaGATATTTGTGCAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLTNWKTFANFTIRAASKLGE*IFVQPG Trigger: CCCAGGCTGCACAAATATCAACTCCCCCAACTTTGA...AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AAACCTAAATGGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGAAACTCAGAAGAGAACTaGCCGTTGACTCTGGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: KPKWTGHDVFCLALVLGRNSEEN*PLTLGR Trigger: TCGTCCCAGAGTCAACGGCAAGTTCTCTTCTGAGTT...TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS GCA 90 bp | CTGCACTCCATCAGGAAAGACTCTAACTCTTGGAAAAGGAAGCAATaGCTGTTGTCTTGGAAGTCCATTGGGTTTATTCTTCTTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LHSIRKDSNSWKRKQ*LLSWKSIGFILLKP Trigger: AGGTTTAAGAAGAATAAACCCAATGGACTTCCAAGACAACAGGCATTGCTTCCTTTTCCAAGAGTTAGAGTCTTTCCTGATGGAGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 90 bp | ATTGGCTTGAAAATCAAAGTTGGGGGAGTTGATATTTGTGCAGCCTaGGTATGTATTAAAGTTGTAATAGCTTTCCGCAGCAGTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IGLKIKVGGVDICAA*VCIKVVIAFRSSFH Trigger: GTGGAAACTGCTGCGGAAAGCTATTACAACTTTAATACATACCCAGGCTGCACAAATATCAACTCCCCCAACTTTGATTTTCAAGCCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | CACTATATGATGAGCTCAAAGGTAGACATCAGTTGGCTAAAAGAAACCAGCAAGTGTGGCCAAGTTATTTaGATACTCAAAGCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HYMMSSKVDISWLKETSKCGQVI*ILKACL Trigger: GAGACAGGCTTTGAGTATCAAAATAACTTGGCCACA...CTTGCTGGTTTCTTTTAGCCAACTGATGTCTACCTTTGAGCTCATCATATAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTTCTGCTCACAAATTGGAAAACCTTTGCCAACTTCACAATAAGAGCAGCTGGAAGCTTTTCAGGTTaGATAAAGAAATGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLLTNWKTFANFTIRAAGSFSG*IKKCRG Trigger: GCCTCTGCATTTCTTTATCAAACCTGAAAAGCTTCC...AGCTGCTCTTATTGTGAAGTTGGCAAAGGTTTTCCAATTTGTGAGCAGAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AACTTAATGATGCAACTTTTTATCACATCAGCCCTCTTTGTAGCAGTGAAAACACAGTTTCCACTGTCTTaGCCAGTTGCTCCACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NLMMQLFITSALFVAVKTQFPLS*PVAPPS Trigger: ACTTGGTGGAGCAACTGGCAAAGACAGTGGAAACTG...TGTTTTCACTGCTACAAAGAGGGCTGATGTGATAAAAAGTTGCATCATTAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AACTTAATGATGCAACTTTTTATCACATCAGCCCTCTTTGTAGCAGTGAAAACAGACACAGTAGGACACTaGGCATCCATCAATGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: NLMMQLFITSALFVAVKTDTVGH*ASINDR Trigger: GCGATCATTGATGGATGCCAAGTGTCCTACTGTGTC...TGTTTTCACTGCTACAAAGAGGGCTGATGTGATAAAAAGTTGCATCATTAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAAAGTAGGTTGAACAAGGTAAATTCTAACTGTGCAGCAGACAGAAAGTGGGCAATGCCTGTTGTCTaGGAAGTCCATTGGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SKSRLNKVNSNCAADRKWAMPVV*EVHWVY Trigger: ATAAACCCAATGGACTTCCAAGACAACAGGCATTGC...CCACTTTCTGTCTGCTGCACAGTTAGAATTTACCTTGTTCAACCTACTTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AACTTAATGATGCAACTTTTTATCACATCAGCCCTCTTTGTAGCAGTGAAAACAAGGAAGCAATGCCTGTaGTCTTGGAAGTCCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NLMMQLFITSALFVAVKTRKQCL*SWKSIG Trigger: CCCAATGGACTTCCAAGACAACAGGCATTGCTTCCT...TGTTTTCACTGCTACAAAGAGGGCTGATGTGATAAAAAGTTGCATCATTAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AAACCTAAATGGACAGGACATGATGTCTTCTGTTTGGCATTAGTTTTAGGGAGAATCATCTGTATTGGCTaGAAAATCAAAGTTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPKWTGHDVFCLALVLGRIICIG*KIKVGG Trigger: TCCCCCAACTTTGATTTTCAAGCCAATACAGATGAT...TCTCCCTAAAACTAATGCCAAACAGAAGACATCATGTCCTGTCCATTTAGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS-3UTR CAA 90 bp | AACTTAATGATGCAACTTTTTATCACATCAGCCCTCTTTGTAGCAGTGAAAACAATAGTCTACCACTTTTaGATGACTCCTCTAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLMMQLFITSALFVAVKTIVYHF*MTPLGS Trigger: GGAACCTAGAGGAGTCATCAAAAAGTGGTAGACTAT...TGTTTTCACTGCTACAAAGAGGGCTGATGTGATAAAAAGTTGCATCATTAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 72 bp | TGCAGAGGCAAGCCAGCACGGTCCACTGCCACCAGGTaGTTAATGATGCCCTTCTGCCAGGTTTCGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CRGKPARSTATR*LMMPFCQVSMV Trigger: GACCATCGAAACCTGGCAGAAGGGCATCATTAACCACCTGGTGGCAGTGGACCGTGCTGGCTTGCCTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CAA 72 bp | TCGTGTAAAGACTCCAGCCTTGACACAGTAGGACACTaGGCATCCATCAATGATCGCAGCGAGCTGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCKDSSLDTVGH*ASINDRSELLA Trigger: AGCCAACAGCTCGCTGCGATCATTGATGGATGCCAAGTGTCCTACTGTGTCAAGGCTGGAGTCTTTACACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CCA 72 bp | AATGATGCCCTTCTGCCAGGTTTCGATGGTCATCCCTaGGTAGAAGGGAATTCCTCCAATACTCTGAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: NDALLPGFDGHP*VEGNSSNTLNP Trigger: AGGGTTCAGAGTATTGGAGGAATTCCCTTCTACCCAGGGATGACCATCGAAACCTGGCAGAAGGGCATCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS TCA 72 bp | GACGGCACAACTGATAAACCCCTCCAAAGGGAGCGTTaGCCAGTTTACCATCACAAGAGCCATCATCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: DGTTDKPLQRER*PVYHHKSHHLY Trigger: ATACAGATGATGGCTCTTGTGATGGTAAACTGGTCAACGCTCCCTTTGGAGGGGTTTATCAGTTGTGCCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
||
| CDS CAA 72 bp | GGGATGATGTACTGTCCGTCTTCTGTGGTCTTACAGTaGTTGTATGTCAAGTCCATCACTTGCCCCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GMMYCPSSVVLQ*LYVKSITCPMS Trigger: GGACATGGGGCAAGTGATGGACTTGACATACAACAACTGTAAGACCACAGAAGACGGACAGTACATCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | TACAGCCTGGTCTCTCACTTGAGTGGTCTTTATCCTTaGGAACTCAGAAGAGAACTTGCCGTTGACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: YSLVSHLSGLYP*ELRRELAVDSG Trigger: CCCAGAGTCAACGGCAAGTTCTCTTCTGAGTTCCAAAGGATAAAGACCACTCAAGTGAGAGACCAGGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS TCA 72 bp | TGGGCCCCAACTCATGATCCAGAGAAACACATACCTTaGCGTTCTCAAACAGCTTCAGAGGAAAGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: WAPTHDPEKHIP*RSQTASEESNW Trigger: CCAGTTACTTTCCTCTGAAGCTGTTTGAGAACGTCAAGGTATGTGTTTCTCTGGATCATGAGTTGGGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | GGGCACGATGGTTCATTTGTCATAGGGTTGATGCTCTaGTCAGTGAAGACTCCTCCAAAGAGAATTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GHDGSFVIGLML*SVKTPPKRIPE Trigger: CTCAGGAATTCTCTTTGGAGGAGTCTTCACTGACAAGAGCATCAACCCTATGACAAATGAACCATCGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | TTGCAGCAGTTGATCCTCCTGATAGTCTACCACTTTTaGATGACTCCTCTAGGTTCCATTGCAGGGTATAGG | + |
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Preference number: 6 (lower is better) Translates to: LQQLILLIVYHF*MTPLGSIAGYR Trigger: CCTATACCCTGCAATGGAACCTAGAGGAGTCATCAAAAAGTGGTAGACTATCAGGAGGATCAACTGCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 90 bp | AGCGTTGACCAGTTTACCATCACAAGAGCCATCATCTGTATTGGCTaGAAAATCAAAGTTGGGGGAGTTGATATTTGTGCAGCCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SVDQFTITRAIICIG*KIKVGGVDICAAWV Trigger: TACCCAGGCTGCACAAATATCAACTCCCCCAACTTTGATTTTCAAGCCAATACAGATGATGGCTCTTGTGATGGTAAACTGGTCAACGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS GCA 72 bp | ATGGATCTCTTTAAGTGCCTTCTCCTCTTCAGCATATaGCACTGTGGTCCAGATAAGGACTGTGACAATGAA | + |
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Preference number: 6 (lower is better) Translates to: MDLFKCLLLFSI*HCGPDKDCDNE Trigger: TTCATTGTCACAGTCCTTATCTGGACCACAGTGGCATATGCTGAAGAGGAGAAGGCACTTAAAGAGATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CCA 72 bp | AAACAGCTTCAGAGGAAAGTAACTGGTTGGGCACGATaGTTCATTTGTCATAGGGTTGATGCTCTTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KQLQRKVTGWAR*FICHRVDALVS Trigger: ACTGACAAGAGCATCAACCCTATGACAAATGAACCATCGTGCCCAACCAGTTACTTTCCTCTGAAGCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | ATGATGTACTGTCCGTCTTCTGTGGTCTTACAGTTGTaGTATGTCAAGTCCATCACTTGCCCCATGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: MMYCPSSVVLQL*YVKSITCPMSI Trigger: TATGGACATGGGGCAAGTGATGGACTTGACATACAACAACTGTAAGACCACAGAAGACGGACAGTACATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 90 bp | GAAGGGAATTCCTCCAATACTCTGAACCCTAGAACCGGTTCTGTTTaGAAGATAGCCTGTGGCCAAGTTATTTTGATACTCAAAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: EGNSSNTLNPRTGSV*KIACGQVILILKAC Trigger: ACAGGCTTTGAGTATCAAAATAACTTGGCCACAGGCTATCTTCAAAACAGAACCGGTTCTAGGGTTCAGAGTATTGGAGGAATTCCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS TCA 72 bp | ACTTTGGCAGAAATGATTTCTCTAAGTCTCCAGATGTaGAAGAACCATACAAGGGGTTCCCTTTTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLAEMISLSLQM*KNHTRGSLLCS Trigger: GCTGCACAAAAGGGAACCCCTTGTATGGTTCTTTCACATCTGGAGACTTAGAGAAATCATTTCTGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CCA 72 bp | TCCAAAACAGGTAGATTCAGAGCATTCTGGCACTTTTaGAAACCATACTCATGGATCTCTTTAAGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKTGRFRAFWHF*KPYSWISLSAF Trigger: GAAGGCACTTAAAGAGATCCATGAGTATGGTTTCCAAAAGTGCCAGAATGCTCTGAATCTACCTGTTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CCA 72 bp | TCTAACTCTTGGAAAAGGAAGCAATGCCTGTTGTCTTaGAAGTCCATTGGGTTTATTCTTCTTAAACCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SNSWKRKQCLLS*KSIGFILLKPP Trigger: CGGAGGTTTAAGAAGAATAAACCCAATGGACTTCCAAGACAACAGGCATTGCTTCCTTTTCCAAGAGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CCA 72 bp | AAAATCAAAGTTGGGGGAGTTGATATTTGTGCAGCCTaGGTATGTATTAAAGTTGTAATAGCTTTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KIKVGGVDICAA*VCIKVVIAFRS Trigger: GCTGCGGAAAGCTATTACAACTTTAATACATACCCAGGCTGCACAAATATCAACTCCCCCAACTTTGATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | CAGTTTACCATCACAAGAGCCATCATCTGTATTGGCTaGAAAATCAAAGTTGGGGGAGTTGATATTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: QFTITRAIICIG*KIKVGGVDICA Trigger: TGCACAAATATCAACTCCCCCAACTTTGATTTTCAAGCCAATACAGATGATGGCTCTTGTGATGGTAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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| CDS CAA 72 bp | GGTTCTGTTTTGAAGATAGCCTGTGGCCAAGTTATTTaGATACTCAAAGCCTGTCTCTATTTTGAAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GSVLKIACGQVI*ILKACLYFEVH Trigger: GTGAACTTCAAAATAGAGACAGGCTTTGAGTATCAAAATAACTTGGCCACAGGCTATCTTCAAAACAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168148.2 |
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