Pregenerated sensors for PFKL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020277Ensembl transcript IDs: ENSMUST00000020522.9, ENSMUST00000145716.2, ENSMUST00000218383.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATaGAGCAGCTGGGTACATGGCCTGCAATACCCCCACAGAAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: HSRTLLPAALGAPAR*SSWVHGLQYPHRSL Trigger: AAGGCTTCTGTGGGGGTATTGCAGGCCATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR TCA 90 bp | TTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGATATaGCACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LLPCAQDQTLQGAVI*HLHSRTLLPAALGA Trigger: AGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTCATATCACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCACTAGCACTGGGAGGGTaGGAGTCCGGGAACGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SWPVRERQCGSDWKVGAPLALGG*ESGNAG Trigger: TCCTGCGTTCCCGGACTCTCACCCTCCCAGTGCTAG...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR TCA 90 bp | GACACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGCTCCGAGTTCCCCTTaGGTTCCCCTCGGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DTYTPGLCSQQLWGLQPDAPSSP*VPLGAG Trigger: CCCAGCACCGAGGGGAACTCAAGGGGAACTCGGAGC...ATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR TCA 90 bp | CATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACTTTTCAGCCGTGTGGTaGGGCAGCCAGCTGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: HCPQADTPAIPGQVWGSHFSAVW*GSQLAS Trigger: ACTGGCCAGCTGGCTGCCTCACCACACGGCTGAAAA...GTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR CCA 90 bp | GACACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATAGGCACTGTAGAGGATaGACCCAGCAGCAGCTCACG | + |
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Preference number: 2 (lower is better) Translates to: DTYTPGLCSQQLWGLQPDRHCRG*TQQQLT Trigger: CGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCT...ATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGACCGGCGATGGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTGAGATCTGCTCCTCCAGCAAGCTaGCCCACTCGTTGCGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PDRRWSSVRSSELWTLRSAPPAS*PTRCGR Trigger: TCTTCCGCAACGAGTGGGGCAGCTTGCTGGAGGAGC...AGATCTCAGAGTCCACAGCTCAGAACTACGCACACTTGACCATCGCCGGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR-3UTR CCA 90 bp | AATATACAGGCCTTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGGAGAGGGATCTGAGGTaGGGCTGGCCAGGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: NIQALLPCAQDQTLQGAVERDLR*GWPGLS Trigger: GCTGAGCCCTGGCCAGCCCCACCTCAGATCCCTCTC...CACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAAGGCCTGTATATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR CCA 90 bp | ATCACCAACTGCCCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTAGTTCCCCTCGGTGCTaGGATCTGTGGCTAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: ITNCPSRGPEFKSQQPHGSSPRC*DLWLAL Trigger: CAGTGCTAGCCACAGATCCCAGCACCGAGGGGAACT...ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTTGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR TCA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGCCCTTCCAGAGGTCCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKPFQRS*VQIPAT Trigger: GGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGG...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR GCA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGTTGAGTTCCCCTCGGTaGTGGGATCTGTGGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKLSSPR*WDLWLA Trigger: TGCTAGCCACAGATCCCAGCACCGAGGGGAACTCAA...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR CCA 72 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTaGAAGGTAGGGGCCCCACAGGCTCTCTGTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SWPVRERQCGSD*KVGAPQALCPG Trigger: CCCAGGACAGAGAGCCTGTGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCAAGCTGCCCCACTCGTTGCGGAAGATGTTGGCCCCCGTGAGGCTGCCGCCGATGACACACAGGTaGGTGATGCCGTGTTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SSKLPHSLRKMLAPVRLPPMTHR*VMPCWS Trigger: GCTCCAACACGGCATCACCAACCTGTGTGTCATCGG...CGGCAGCCTCACGGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCTTGCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR TCA 72 bp | ACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATaGAGCAGCTGGGTACATGGCCTGCAATACCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TLLPAALGAPAR*SSWVHGLQYPH Trigger: GTGGGGGTATTGCAGGCCATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR TCA 72 bp | CCTCGGTGCTGGGATCTGTGGCTAGCACTGGGAGGGTaGGAGTCCGGGAACGCAGGAACAGTAGTGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: PRCWDLWLALGG*ESGNAGTVVTV Trigger: TACTGTCACTACTGTTCCTGCGTTCCCGGACTCTCACCCTCCCAGTGCTAGCCACAGATCCCAGCACCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCGGCGATGGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTGAGATCTAAGCTGCCCCACTCGTaGCGGAAGATGTTGGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: PDRRWSSVRSSELWTLRSKLPHS*RKMLAP Trigger: GGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCTT...AGATCTCAGAGTCCACAGCTCAGAACTACGCACACTTGACCATCGCCGGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR-3UTR CAA 90 bp | CGACCTCAAGAACCTCCTGAAGGGCAGCAATCAGCCAAGAACACTATACTGACACCAGACCGGGGCACATaGCCCACAGGCCGATACCCC | + |
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Preference number: 3 (lower is better) Translates to: RPQEPPEGQQSAKNTILTPDRGT*PTGRYP Trigger: GGGGTATCGGCCTGTGGGCAATGTGCCCCGGTCTGG...TGTCAGTATAGTGTTCTTGGCTGATTGCTGCCCTTCAGGAGGTTCTTGAGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR CCA 72 bp | AGAAGTCGTTATCGATGGAGCCCACCAGACCGGCGATaGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: RSRYRWSPPDRR*SSVRSSELWTL Trigger: CAGAGTCCACAGCTCAGAACTACGCACACTTGACCATCGCCGGTCTGGTGGGCTCCATCGATAACGACTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR TCA 72 bp | TGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGATATaGCACTTACACTCCAGGACTCTGCTCCCAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: CAQDQTLQGAVI*HLHSRTLLPAA Trigger: AGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTCATATCACAGCACCCTGGAGGGTTTGGTCTTGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR GCA 72 bp | GACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTaGCCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: DWRDGSAVKITN*PSRGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR-3UTR CAA 90 bp | TGGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTGAGATCTTGCCTTCCTTCAGTTGGTGATGCCGTGTaGGAGCAGATTGTAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: WSSVRSSELWTLRSCLPSVGDAV*EQIVGC Trigger: GCAGCCTACAATCTGCTCCAACACGGCATCACCAAC...TGAAGGAAGGCAAGATCTCAGAGTCCACAGCTCAGAACTACGCACACTTGACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR TCA 72 bp | CCCTCTCCCTGGACTCCTCTGGTCATGTTGTCCCAGTaGCCATGCTCTAGACAGGTGACTTTATTTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSPWTPLVMLSQ*PCSRQVTLFLK Trigger: TTTTAGAAATAAAGTCACCTGTCTAGAGCATGGTCACTGGGACAACATGACCAGAGGAGTCCAGGGAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGCAAGCTGCCCCACTCGTTGCGGAAGATGTTGGCCCCCGTGAGGCTGCCGCACTCCAATGGCCTTaGCAGCCCCCGACATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LQQAAPLVAEDVGPREAAALQWP*QPPTSA Trigger: TGCGGATGTCGGGGGCTGGCAAGGCCATTGGAGTGC...GGCAGCCTCACGGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCTTGCTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| 3UTR CAA 72 bp | CACATCCCTCAGCCAGCCACGGGCTCCGAGTTCCCCTaGAGTTCCCCTCGGTGCTGGGATCTGTGGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: HIPQPATGSEFP*SSPRCWDLWLA Trigger: TGCTAGCCACAGATCCCAGCACCGAGGGGAACTCAAGGGGAACTCGGAGCCCGTGGCTGGCTGAGGGATGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | CTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGAAGCAGCTGGGTACATGTCAAGGTGCGGCGTGTaGCGTGCTCCAGCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCSQQLWGLQPDEAAGYMSRCGV*RAPAPQ Trigger: CTGGGGAGCTGGAGCACGTCACACGCCGCACCTTGA...CATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCAGCACTCCAATGGCCTTaGCAGCCCCCGACATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SWPVRERQCGSDWKVGAPALQWP*QPPTSA Trigger: TGCGGATGTCGGGGGCTGGCAAGGCCATTGGAGTGC...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGAGTTCGCTCCTCCAGCAAGCTaGCCCACTCGTTGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QSSTVDPHIPQPATGSEFAPPAS*PTRCGR Trigger: TCTTCCGCAACGAGTGGGGCAGCTTGCTGGAGGAGC...GAACTCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGAGTTCGGAGCACCACCCTGCTaGAAGTGGCCCAGCACATTG | + |
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Preference number: 4 (lower is better) Translates to: QSSTVDPHIPQPATGSEFGAPPC*KWPSTL Trigger: CAATGTGCTGGGCCACTTGCAGCAGGGTGGTGCTCC...GAACTCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | TGTGGGCAGGACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTGCCCTTCCGGTTCCCGGAGAGGCTaGCCACACAGGCCGGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: CGQDWRDGSAVKITNCPSGSRRG*PHRPAC Trigger: ACACGCCGGCCTGTGTGGTCAGCCTCTCCGGGAACC...GGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTCCTGCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGAGTTCGCTGAGCCAGTTGGCTaGCTTGATGTTCTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QSSTVDPHIPQPATGSEFAEPVG*LDVLAS Trigger: GGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGC...GAACTCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGAAGCAGCTGGGTACATGTGCGGAGCGCACAGCTaGATTCATGCCAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCSQQLWGLQPDEAAGYMCGAHS*IHASSW Trigger: CCAGCTGCTGGCATGAATGCAGCTGTGCGCTCCGCA...CATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCACAGCCTGCCACATCATaGCAGCCCACTTCTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SWPVRERQCGSDWKVGAPQPATS*QPTSCT Trigger: GGTGCAAGAAGTGGGCTGGCATGATGTGGCAGGCTG...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGAGTTCAGAAGTCGTTATCGATaGAGCCCACCAGACCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QSSTVDPHIPQPATGSEFRSRYR*SPPDRR Trigger: TCGCCGGTCTGGTGGGCTCCATCGATAACGACTTCT...GAACTCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCTGGGCAGTGTCCTCTTaGTCCCCAGCATCGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTWAVSS*SPASSH Trigger: GTGGCTCGATGCTGGGGACCAAGAGGACACTGCCCA...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGAGCCAACGTCCCGACCTCAAGAACCTCCTGAAGGGCAGCAATCAGCCCCTCCAGGTGGGGCTTaGGCAGTGTCCTCTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SEEPTSRPQEPPEGQQSAPPGGA*AVSSWS Trigger: GGACCAAGAGGACACTGCCCAAGCCCCACCTGGAGG...GGCTGATTGCTGCCCTTCAGGAGGTTCTTGAGGTCGGGACGTTGGCTCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| 3UTR CAA 72 bp | CTGACAATGACAGTCTCCTCTCCAGACCGGGGCACATaGCCCACAGGCCGATACCCCAGCCATTCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTMTVSSPDRGT*PTGRYPSHSRA Trigger: TGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAATGTGCCCCGGTCTGGAGAGGAGACTGTCATTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | CTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGAAGCAGCTGGGTACATGGTTGACAGCCGTGTCTaGGCCCAGGCTGAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LCSQQLWGLQPDEAAGYMVDSRV*AQAEVS Trigger: ACTGACTTCAGCCTGGGCTCAGACACGGCTGTCAAC...CATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | GTGTTGGAGCAGATTGTAGGCTGCAGCCAGGCGGCCTTCCCTCGTAGTGAAGGCGCTGAGCCAGTTGGCTaGCTTGATGTTCTCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLEQIVGCSQAAFPRSEGAEPVG*LDVLAS Trigger: GGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGC...GCCTTCACTACGAGGGAAGGCCGCCTGGCTGCAGCCTACAATCTGCTCCAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| CDS-3UTR CCA 90 bp | ATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACGACCTCTCCTCGTCCATaGCCTTCTGCACGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: IAHRPIPQPFQGRYGAHTTSPRP*PSARPL Trigger: CAAAGGACGTGCAGAAGGCCATGGACGAGGAGAGGT...CGTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCTGCCACGGAGCTGGATaGCCTCGTCAAACCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTCHGAG*PRQTSP Trigger: AGGAGAGGTTTGACGAGGCCATCCAGCTCCGTGGCA...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | GACACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATACAATGGCCTCCAGGTaGGGCTTGGGCAGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DTYTPGLCSQQLWGLQPDTMASR*GLGSVL Trigger: GAGGACACTGCCCAAGCCCCACCTGGAGGCCATTGT...ATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | ATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACGCAGACACCCACAACATaGCCTTCACCCCCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IAHRPIPQPFQGRYGAHTQTPTT*PSPPVW Trigger: CCAAACTGGGGGTGAAGGCCATGTTGTGGGTGTCTG...CGTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCCGTAGCCCTCATAGATaGGGAAGACTTTGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTRSPHR*GRLWPP Trigger: TGGGGGCCAAAGTCTTCCTCATCTATGAGGGCTACG...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | ATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACGACAAAGGTCCTCTGGTaGCTTTGGGCAGTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: IAHRPIPQPFQGRYGAHTTKVLW*LWAVVV Trigger: CACTACCACTGCCCAAAGTCACCAGAGGACCTTTGT...CGTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | TGTGGGCAGGACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTGCCCTTCCGCACAGCTGCATTCATaGCAGCAGCTGGAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: CGQDWRDGSAVKITNCPSAQLHS*QQLEPP Trigger: TGGGGGCTCCAGCTGCTGGCATGAATGCAGCTGTGC...GGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTCCTGCCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | GCAGCTCACGTAAGAAACCCTGATAAGGGGCTTAGAGAGGGATCTGAGGTGGGGAGATTCAGCCACCACTaGTCCCGGGGCATGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AAHVRNPDKGLREGSEVGRFSHH*SRGMRC Trigger: GCACCGCATGCCCCGGGAGCAGTGGTGGCTGAATCT...CCCCACCTCAGATCCCTCTCTAAGCCCCTTATCAGGGTTTCTTACGTGAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TTGCACCTGAGTCCTGACAACCCTCTCCCTGGACTCCTCTGGTCATGTTGTCCCCTCCTGCCACGGAGCTaGATGGCCTCGTCAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: LHLSPDNPLPGLLWSCCPLLPRS*MASSNL Trigger: GAGGTTTGACGAGGCCATCCAGCTCCGTGGCAGGAG...GGGACAACATGACCAGAGGAGTCCAGGGAGAGGGTTGTCAGGACTCAGGTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCACTGAGTCTGGAGCATTaGCAAACACCCGCCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SWPVRERQCGSDWKVGAPLSLEH*QTPALY Trigger: GTAAAGGGCGGGTGTTTGCCAATGCTCCAGACTCAG...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | TGTGGGCAGGACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTGCCCTTCCTCGAAGCCCAGCCTCTaGACCACCAGATCCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWRDGSAVKITNCPSSKPSL*TTRSFT Trigger: CGTGAAGGATCTGGTGGTTCAGAGGCTGGGCTTCGA...GGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTCCTGCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | GACCCAGCAGCAGCTCACGTAAGAAACCCTGATAAGGGGCTTAGAGAGGGATCTAGCTGCCCCACTCGTTaGGGAAGATGTTGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPAAAHVRNPDKGLREGSSCPTR*GRCWPP Trigger: CGGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCT...AGATCCCTCTCTAAGCCCCTTATCAGGGTTTCTTACGTGAGCTGCTGCTGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCTCCCGGGGCATGCGGTaGTCAAAATCAGTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTSRGMR*SKSVSF Trigger: GAAAGAGACTGATTTTGAGCACCGCATGCCCCGGGA...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | ATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACGATGGTGCCACCCAGCTaGATGATATTGGAAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAHRPIPQPFQGRYGAHTMVPPS*MILETL Trigger: CAGCGTTTCCAATATCATCCAGCTGGGTGGCACCAT...CGTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | AATATACAGGCCTTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGCCGGCGTGTCAGGCGTaGCCTCTAGCAGCGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NIQALLPCAQDQTLQGAVPACQA*PLAAPS Trigger: TGATGGCGCTGCTAGAGGCCACGCCTGACACGCCGG...CACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAAGGCCTGTATATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCATTCATGCCAGCAGCTaGAGCCCCCACATTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTIHASS*SPHIQD Trigger: ATCCTGAATGTGGGGGCTCCAGCTGCTGGCATGAAT...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGAGCCAACGTCCCGACCTCAAGAACCTCCTGAAGGGCAGCAATCAGCCCTTGCACCTGACCCTTaGCCAGACCCTCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEEPTSRPQEPPEGQQSALAPDP*PDPQSH Trigger: ATGGCTTTGAGGGTCTGGCCAAGGGTCAGGTGCAAG...GGCTGATTGCTGCCCTTCAGGAGGTTCTTGAGGTCGGGACGTTGGCTCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | TCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCACAGATTCGGTCGAAGGCTaGAGGCGTCCCTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAKNTILTMTVSSPDRGTDSVEG*RRPSSL Trigger: CAGCGAGGAGGGACGCCTTCAGCCTTCGACCGAATC...TGTGCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | GACACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGCTGATGCGGTAGTGTaGCAGCATCTTCAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTYTPGLCSQQLWGLQPDADAVV*QHLQHQ Trigger: CTGATGCTGAAGATGCTGGCACACTACCGCATCAGC...ATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CAATCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCGTGCGGCGTGTGACGTaGTCCAGCTCCCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QSAKNTILTMTVSSPDRGVRRVT*SSSPDT Trigger: TGTGTCTGGGGAGCTGGAGCACGTCACACGCCGCAC...GCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | CATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACGTTGCTGATGGTGGCTaGGATGACACACATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HCPQADTPAIPGQVWGSHVADGG*DDTHDN Trigger: ATTGTCATGTGTGTCATCCCAGCCACCATCAGCAAC...GTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | CTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGAAGCAGCTGGGTACATGAGCACCAGTCCCCTCTaGATGTCTGTCTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSQQLWGLQPDEAAGYMSTSPL*MSVFIF Trigger: GAAGATGAAGACAGACATCCAGAGGGGACTGGTGCT...CATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TGTGGGCAGGACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTGCCCTTCCCCTTCACCCCCAGTTTaGTCCCATAGTTCCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWRDGSAVKITNCPSPSPPV*SHSSGR Trigger: TCGACCGGAACTATGGGACCAAACTGGGGGTGAAGG...GGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTCCTGCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | TCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACGGTCTCCTCCTCGCTGTACATaGCCCAGCACAGTCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGPEFKSQQPHGGSQRSPPRCT*PSTVTR Trigger: ACGAGTGACTGTGCTGGGTCATGTACAGCGAGGAGG...AGACCGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | CAATCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCCCAGCACATTGGTCCTaGAGTCAAACACGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSAKNTILTMTVSSPDRGPAHWS*SQTRPC Trigger: GCAGGGGCGTGTTTGACTGCAGGACCAATGTGCTGG...GCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR TCA 90 bp | GACCCAGCAGCAGCTCACGTAAGAAACCCTGATAAGGGGCTTAGAGAGGGATCTTACGGGTCACAGCCCTaGCAGCAGCATTCATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPAAAHVRNPDKGLREGSYGSQP*QQHSYL Trigger: AAGGTATGAATGCTGCTGTCAGGGCTGTGACCCGTA...AGATCCCTCTCTAAGCCCCTTATCAGGGTTTCTTACGTGAGCTGCTGCTGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGGCCAGGTACCCGCAGTaGCGTCCCATCACCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKARYPQ*RPITSK Trigger: TTTGGAGGTGATGGGACGGCACTGCGGGTACCTGGC...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
||
| CDS-3UTR GCA 90 bp | TTGCACCTGAGTCCTGACAACCCTCTCCCTGGACTCCTCTGGTCATGTTGTCCCGTCAATGGCACCCTCTaGGATGATGATGATGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLSPDNPLPGLLWSCCPVNGTL*DDDDVQ Trigger: CTGAACATCATCATCATCGCAGAGGGTGCCATTGAC...GGGACAACATGACCAGAGGAGTCCAGGGAGAGGGTTGTCAGGACTCAGGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | TGTGGGCAGGACTGGAGAGATGGCTCAGCGGTTAAGATCACCAACTGCCCTTCCCCCTCAAAGCCATCATaGACGATGTATACCGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWRDGSAVKITNCPSPSKPS*TMYTVC Trigger: ACACACGGTATACATCGTGCATGATGGCTTTGAGGG...GGAAGGGCAGTTGGTGATCTTAACCGCTGAGCCATCTCTCCAGTCCTGCCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | CCAGACCGGCGATGGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTGAGATCTATGGTGCCACCCAGCTaGATGATATTGGAAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDRRWSSVRSSELWTLRSMVPPS*MILETL Trigger: CAGCGTTTCCAATATCATCCAGCTGGGTGGCACCAT...AGATCTCAGAGTCCACAGCTCAGAACTACGCACACTTGACCATCGCCGGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| CDS-3UTR GCA 90 bp | GACCCAGCAGCAGCTCACGTAAGAAACCCTGATAAGGGGCTTAGAGAGGGATCTTGGACTCTGAGATCTTaGCTTCCTTCACCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPAAAHVRNPDKGLREGSWTLRS*LPSPAP Trigger: AGGAGCTGGTGAAGGAAGGCAAGATCTCAGAGTCCA...AGATCCCTCTCTAAGCCCCTTATCAGGGTTTCTTACGTGAGCTGCTGCTGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | AATATACAGGCCTTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGGAGATAGGCTTTCCATaGCGGTCAATGGCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NIQALLPCAQDQTLQGAVEIGFP*RSMAPS Trigger: AGAGGGTGCCATTGACCGGCATGGAAAGCCTATCTC...CACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAAGGCCTGTATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACGGTCTCGTGGATGTTGTAGGTaGGGAGATTCTCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGPEFKSQQPHGGSQRSRGCCR*GDSPQW Trigger: CCATTGTGGAGAATCTCCGCACCTACAACATCCACG...AGACCGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGGGAGATTCTCCACAATaGCCTCCAGGTGGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKGDSPQ*PPGGAW Trigger: CCAAGCCCCACCTGGAGGCCATTGTGGAGAATCTCC...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CCA 90 bp | TCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCACATTGGCCTTTAAGTCATaGATGTTGAAAGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKNTILTMTVSSPDRGTLAFKS*MLKGSS Trigger: TGAGGACCCTTTCAACATCCATGACTTAAAGGCCAA...TGTGCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGCAATGGTCATGTCAGTaGCACAGAAGTCGTTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKQWSCQ*HRSRYR Trigger: TCGATAACGACTTCTGTGGCACTGACATGACCATTG...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR GCA 90 bp | ATCACCAACTGCCCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTATCTTCTCTGTCATATaGTCCACATTGGCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITNCPSRGPEFKSQQPHGIFSVI*STLAFK Trigger: CTTAAAGGCCAATGTGGAGCATATGACAGAGAAGAT...ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTTGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCAGCCTCCAGGTGGGGCTaGGGCAGTGTCCTCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWPVRERQCGSDWKVGAPASRWG*GSVLLV Trigger: GACCAAGAGGACACTGCCCAAGCCCCACCTGGAGGC...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 90 bp | TGTCCTCTTGGTCCCCAGCATCGAGCCACCACGTCCCAGCCAGCCTaGCACATCATGCCAGCCCACTTCTTGCACCTGACCCTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPLGPQHRATTSQPA*HIMPAHFLHLTLGQ Trigger: CTGGCCAAGGGTCAGGTGCAAGAAGTGGGCTGGCATGATGTGGCAGGCTGGCTGGGACGTGGTGGCTCGATGCTGGGGACCAAGAGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | TCCAGCAAGCTGCCCCACTCGTTGCGGAAGATGTTGGCCCCCGTGAGGCTGCCGAGCCAGTTGGCTGGCTaGATGTTCTCGCCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKLPHSLRKMLAPVRLPSQLAG*MFSPPS Trigger: GGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCT...CGGCAGCCTCACGGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCTTGCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGACCCAGCTGGATGATATaGGAAACGCTGAGCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: APEQHSRPPHPSASHGLRPSWMI*ETLSQL Trigger: CAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGG...TCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGCACAGTAGACCCCCACATCCCTCAGCCAGCCACGGGCTCCGAGTTCTCAGTGCCAGGCACATaGTTGCTGATGGTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSTVDPHIPQPATGSEFSVPGT*LLMVAG Trigger: CCCAGCCACCATCAGCAACAATGTGCCTGGCACTGA...GAACTCGGAGCCCGTGGCTGGCTGAGGGATGTGGGGGTCTACTGTGCTGCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | TCACCAGCAGGGCGTGGATGTTGTAGGTGCGGAGATTCTCCACAATaGCCTCCAGGTGGGGCTTGGGCAGTGTCCTCTTGGTCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPAGRGCCRCGDSPQ*PPGGAWAVSSWSPA Trigger: TGCTGGGGACCAAGAGGACACTGCCCAAGCCCCACCTGGAGGCCATTGTGGAGAATCTCCGCACCTACAACATCCACGCCCTGCTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | CATTGCCCACAGGCCGATACCCCAGCCATTCCAGGGCAGGTATGGGGCTCACACCCGATGACACACAGGTaGGTGATGCCGTGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HCPQADTPAIPGQVWGSHPMTHR*VMPCWS Trigger: GCTCCAACACGGCATCACCAACCTGTGTGTCATCGG...GTGTGAGCCCCATACCTGCCCTGGAATGGCTGGGGTATCGGCCTGTGGGCAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 90 bp | CAAGGTGCGGCGTGTGACGTGCTCCAGCTCCCCAGACACATAGTCTaGCATGCTGATGCGGTAGTGTGCCAGCATCTTCAGCATCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGAACDVLQLPRHIV*HADAVVCQHLQHQP Trigger: CGGCTGATGCTGAAGATGCTGGCACACTACCGCATCAGCATGGCAGACTATGTGTCTGGGGAGCTGGAGCACGTCACACGCCGCACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | TCCTTTGTCACTTGCACACACTCCATGAGAGGTAGCCTCACAGACTaGTTCCCGGAGAGGCTGACCACACAGGCCGGCGTGTCAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFVTCTHSMRGSLTD*FPERLTTQAGVSGV Trigger: CACGCCTGACACGCCGGCCTGTGTGGTCAGCCTCTCCGGGAACCAGTCTGTGAGGCTACCTCTCATGGAGTGTGTGCAAGTGACAAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | AGGAAACCACCGCCCCAATGCGGCCTGCAGGTCCACAGAGCCAAAGTCACAACCGTGCCAGGCACATTGTaGCTGATGGTGGCTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKPPPQCGLQVHRAKVTTVPGTL*LMVAGM Trigger: CATCCCAGCCACCATCAGCAACAATGTGCCTGGCAC...GGTTGTGACTTTGGCTCTGTGGACCTGCAGGCCGCATTGGGGCGGTGGTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 90 bp | CACGGCCTCCATACCCATCTTGCTACTCAGGATTCGGTCGAAGGCTaGAGGCGTCCCTCCTCGCTGTACATGACCCAGCACAGTCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HGLHTHLATQDSVEG*RRPSSLYMTQHSHS Trigger: CGAGTGACTGTGCTGGGTCATGTACAGCGAGGAGGGACGCCTTCAGCCTTCGACCGAATCCTGAGTAGCAAGATGGGTATGGAGGCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | GGTGCCACCCAGCTGGATGATATTGGAAACGCTGAGCCAGTTGGCTaGCTTGATGTTCTCGCCTCCTTCCACAAGGCCCTCGTAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GATQLDDIGNAEPVG*LDVLASFHKALVAL Trigger: GAGGGCTACGAGGGCCTTGTGGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGAAGCAGCTGGGTACATGGAAACGCTGAGCCAGTaGGCTGGCTTGATGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LCSQQLWGLQPDEAAGYMETLSQ*AGLMFS Trigger: CGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTC...CATGTACCCAGCTGCTTCATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
||
| CDS TCA 90 bp | CGGACTGAAGGCCACTACCTTCTTCCGCAGGCCGATCACACAGGCTaGGTCTGGAGCATTGGCAAACACCCGCCCTTTACGGTAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: RTEGHYLLPQADHTG*VWSIGKHPPFTVDI Trigger: GATGTCTACCGTAAAGGGCGGGTGTTTGCCAATGCTCCAGACTCAGCCTGTGTGATCGGCCTGCGGAAGAAGGTAGTGGCCTTCAGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
||
| CDS GCA 90 bp | CTCCAGCTCCCCAGACACATAGTCTGCCATGCTGATGCGGTAGTGTaGCAGCATCTTCAGCATCAGCCGCAGATTCAGCCACCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLPRHIVCHADAVV*QHLQHQPQIQPPLL Trigger: GAGCAGTGGTGGCTGAATCTGCGGCTGATGCTGAAGATGCTGGCACACTACCGCATCAGCATGGCAGACTATGTGTCTGGGGAGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
||
| CDS CCA 90 bp | CACGTAGCTTCTCAGACACCCACAACATGGCCTTCACCCCCAGTTTaGTCCCATAGTTCCGGTCGAAAGGGGTTGGAGCACCACCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVASQTPTTWPSPPV*SHSSGRKGLEHHPA Trigger: AGCAGGGTGGTGCTCCAACCCCTTTCGACCGGAACTATGGGACCAAACTGGGGGTGAAGGCCATGTTGTGGGTGTCTGAGAAGCTACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
||
| CDS CCA 90 bp | GGTGCCACCCAGCTGGATGATATTGGAAACGCTGAGCCAGTTGGCTaGCTTGATGTTCTCGCCTCCTTCCACAAGGCCCTCGTAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GATQLDDIGNAEPVG*LDVLASFHKALVAL Trigger: AAGGGCTACGAGGGCCTTGTGGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
||
| CDS-3UTR CAA 90 bp | GACACTTACACTCCAGGACTCTGCTCCCAGCAGCTTTGGGGGCTCCAGCCAGATGCCTCCATACCCATCTaGCTACTCAGGATTCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DTYTPGLCSQQLWGLQPDASIPI*LLRIRS Trigger: CGACCGAATCCTGAGTAGCAAGATGGGTATGGAGGC...ATCTGGCTGGAGCCCCCAAAGCTGCTGGGAGCAGAGTCCTGGAGTGTAAGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | CAATCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCAAGCTGCCCCACTCGTaGCGGAAGATGTTGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: QSAKNTILTMTVSSPDRGKLPHS*RKMLAP Trigger: GGGGGCCAACATCTTCCGCAACGAGTGGGGCAGCTT...GCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | ACACGCCCCTGCCTTCTGAGGAGTACAGGTTGTATAGGAACTCTGTaGTGTAGTGTTCGTGACACTTCTCGTTCCGGAGCACCAGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: TRPCLLRSTGCIGTL*CSVRDTSRSGAPVP Trigger: GGGGACTGGTGCTCCGGAACGAGAAGTGTCACGAACACTACACCACAGAGTTCCTATACAACCTGTACTCCTCAGAAGGCAGGGGCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | GCCCTTTACGGTAGACATCACGTAGCTTCTCAGACACCCACAACATaGCCTTCACCCCCAGTTTGGTCCCATAGTTCCGGTCGAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ALYGRHHVASQTPTT*PSPPVWSHSSGRKG Trigger: CCCCTTTCGACCGGAACTATGGGACCAAACTGGGGGTGAAGGCCATGTTGTGGGTGTCTGAGAAGCTACGTGATGTCTACCGTAAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | CTACCTTCTTCCGCAGGCCGATCACACAGGCTGAGTCTGGAGCATTaGCAAACACCCGCCCTTTACGGTAGACATCACGTAGCTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LPSSAGRSHRLSLEH*QTPALYGRHHVASQ Trigger: CTGAGAAGCTACGTGATGTCTACCGTAAAGGGCGGGTGTTTGCCAATGCTCCAGACTCAGCCTGTGTGATCGGCCTGCGGAAGAAGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | CCAGACCGGCGATGGTCAAGTGTGCGTAGTTCTGAGCTGTGGACTCTGAGATCTGAAACGCTGAGCCAGTaGGCTGGCTTGATGTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: PDRRWSSVRSSELWTLRSETLSQ*AGLMFS Trigger: CGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTC...AGATCTCAGAGTCCACAGCTCAGAACTACGCACACTTGACCATCGCCGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218383.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTCACGTAAGAAACCCTGATAAGGGGCTTAGAGAGGGATCTGAGGTGGGGGTGGACTCTGAGATCTaGCCTTCCTTCACCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAHVRNPDKGLREGSEVGVDSEI*PSFTSS Trigger: GGAGCTGGTGAAGGAAGGCAAGATCTCAGAGTCCAC...CCCCACCTCAGATCCCTCTCTAAGCCCCTTATCAGGGTTTCTTACGTGAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | ATCACCAACTGCCCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTATGCCAGCCCACTTCTaGCACCTGACCCTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ITNCPSRGPEFKSQQPHGMPAHF*HLTLGQ Trigger: CTGGCCAAGGGTCAGGTGCAAGAAGTGGGCTGGCAT...ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTTGGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | AATATACAGGCCTTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGTTGGGCAGTGTCCTCTaGGTCCCCAGCATCGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: NIQALLPCAQDQTLQGAVLGSVL*VPSIEP Trigger: TGGCTCGATGCTGGGGACCAAGAGGACACTGCCCAA...CACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAAGGCCTGTATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 90 bp | GTGAAGGCCTTACAGCGGGCACTGCCAATAATGGTGCCACCCAGCTaGATGATATTGGAAACGCTGAGCCAGTTGGCTGGCTTGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: VKALQRALPIMVPPS*MILETLSQLAGLMF Trigger: GAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACCATTATTGGCAGTGCCCGCTGTAAGGCCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 |
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| CDS-3UTR CAA 90 bp | CAATCAGCCAAGAACACTATACTGACAATGACAGTCTCCTCTCCAGACCGGGGCAGCCAGTTGGCTGGCTaGATGTTCTCGCCTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: QSAKNTILTMTVSSPDRGSQLAG*MFSPPS Trigger: GGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCT...GCCCCGGTCTGGAGAGGAGACTGTCATTGTCAGTATAGTGTTCTTGGCTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | AATATACAGGCCTTGTTGCCATGTGCTCAAGACCAAACCCTCCAGGGTGCTGTGGGTCCTCTGGTGACTTaGGGCAGTGGTAGTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: NIQALLPCAQDQTLQGAVGPLVT*GSGSDG Trigger: GCCATCACTACCACTGCCCAAAGTCACCAGAGGACC...CACAGCACCCTGGAGGGTTTGGTCTTGAGCACATGGCAACAAGGCCTGTATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | AGCTGGCCAGTGAGGGAGAGGCAATGTGGGTCTGACTGGAAGGTAGGGGCCCCATTTAAGTCATGGATGTaGAAAGGGTCCTCAAAGACG | + |
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Preference number: 5 (lower is better) Translates to: SWPVRERQCGSDWKVGAPFKSWM*KGSSKT Trigger: CGTCTTTGAGGACCCTTTCAACATCCATGACTTAAA...TGGGGCCCCTACCTTCCAGTCAGACCCACATTGCCTCTCCCTCACTGGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 90 bp | ATGGTCTCTACAATGAACACACGCCGCTTTGTCCCTGAGGCTGACTaGTTGATGCGATCACAACTCTCCATTGCAGCGTTGACAGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: MVSTMNTRRFVPEAD*LMRSQLSIAALTAV Trigger: CACGGCTGTCAACGCTGCAATGGAGAGTTGTGATCGCATCAAGCAGTCAGCCTCAGGGACAAAGCGGCGTGTGTTCATTGTAGAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACGGTCTCCTTCTGCACGTCCTTaGTCACTTGCACACACTCCA | + |
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Preference number: 5 (lower is better) Translates to: SRGPEFKSQQPHGGSQRSPSARP*SLAHTP Trigger: TGGAGTGTGTGCAAGTGACAAAGGACGTGCAGAAGG...AGACCGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | TATTGTAAAAATCCAGGCACTGTAGAGGATGGACCCAGCAGCAGCTCACGTAAGGTTGGTGATGCCGTGTaGGAGCAGATTGTAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: YCKNPGTVEDGPSSSSRKVGDAV*EQIVGC Trigger: GCAGCCTACAATCTGCTCCAACACGGCATCACCAAC...CTTACGTGAGCTGCTGCTGGGTCCATCCTCTACAGTGCCTGGATTTTTACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | ATCACCAACTGCCCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTATGGCCAGGGAGAAGTaGGACTTCTCTTTAGACACC | + |
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Preference number: 5 (lower is better) Translates to: ITNCPSRGPEFKSQQPHGMAREK*DFSLDT Trigger: GGTGTCTAAAGAGAAGTCCAACTTCTCCCTGGCCAT...ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTTGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS-3UTR CAA 90 bp | CGACCTCAAGAACCTCCTGAAGGGCAGCAATCAGCCAAGAACACTATACTGACAAAATCAGTCTCTTTCTaGAGTTCTGTGACCGGACTG | + |
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Preference number: 5 (lower is better) Translates to: RPQEPPEGQQSAKNTILTKSVSF*SSVTGL Trigger: CAGTCCGGTCACAGAACTCAAGAAAGAGACTGATTT...TGTCAGTATAGTGTTCTTGGCTGATTGCTGCCCTTCAGGAGGTTCTTGAGGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 72 bp | GGTCCCCAGCATCGAGCCACCACGTCCCAGCCAGCCTaGCACATCATGCCAGCCCACTTCTTGCACCTGACC | + |
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Preference number: 6 (lower is better) Translates to: GPQHRATTSQPA*HIMPAHFLHLT Trigger: GGTCAGGTGCAAGAAGTGGGCTGGCATGATGTGGCAGGCTGGCTGGGACGTGGTGGCTCGATGCTGGGGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | AGCCTCGGCTCCGAGTCTCGCCCAGCCTCTCACACATaGAGTTCTCCCAGCCATCCTCAGGGGGCGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLGSESRPASHT*SSPSHPQGALQ Trigger: CTGAAGCGCCCCCTGAGGATGGCTGGGAGAACTTCATGTGTGAGAGGCTGGGCGAGACTCGGAGCCGAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | ACTTGCACACACTCCATGAGAGGTAGCCTCACAGACTaGTTCCCGGAGAGGCTGACCACACAGGCCGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: TCTHSMRGSLTD*FPERLTTQAGV Trigger: CACGCCGGCCTGTGTGGTCAGCCTCTCCGGGAACCAGTCTGTGAGGCTACCTCTCATGGAGTGTGTGCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | GGGCGTGGATGTTGTAGGTGCGGAGATTCTCCACAATaGCCTCCAGGTGGGGCTTGGGCAGTGTCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRGCCRCGDSPQ*PPGGAWAVSSW Trigger: CCAAGAGGACACTGCCCAAGCCCCACCTGGAGGCCATTGTGGAGAATCTCCGCACCTACAACATCCACGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | TGGCCCCCACATATATGCCCATACGGGTCACAGCCCTaGCAGCAGCATTCATACCTTGCGCATCACCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: WPPHICPYGSQP*QQHSYLAHHRR Trigger: GCGGCGGTGATGCGCAAGGTATGAATGCTGCTGTCAGGGCTGTGACCCGTATGGGCATATATGTGGGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | AGTTCTCCCAGCCATCCTCAGGGGGCGCTTCAGGAATaGATAGCCAATCAGCCCCGGAAGCCAGGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: SSPSHPQGALQE*IANQPRKPGQT Trigger: TGTCTGCCCTGGCTTCCGGGGCTGATTGGCTATTCATTCCTGAAGCGCCCCCTGAGGATGGCTGGGAGAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | GGCCACTACCTTCTTCCGCAGGCCGATCACACAGGCTaGGTCTGGAGCATTGGCAAACACCCGCCCTTTACG | + |
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Preference number: 6 (lower is better) Translates to: GHYLLPQADHTG*VWSIGKHPPFT Trigger: CGTAAAGGGCGGGTGTTTGCCAATGCTCCAGACTCAGCCTGTGTGATCGGCCTGCGGAAGAAGGTAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 72 bp | GCGTGTGACGTGCTCCAGCTCCCCAGACACATAGTCTaGCATGCTGATGCGGTAGTGTGCCAGCATCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACDVLQLPRHIV*HADAVVCQHLQ Trigger: CTGAAGATGCTGGCACACTACCGCATCAGCATGGCAGACTATGTGTCTGGGGAGCTGGAGCACGTCACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | CATACCCATCTTGCTACTCAGGATTCGGTCGAAGGCTaGAGGCGTCCCTCCTCGCTGTACATGACCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HTHLATQDSVEG*RRPSSLYMTQH Trigger: GTGCTGGGTCATGTACAGCGAGGAGGGACGCCTTCAGCCTTCGACCGAATCCTGAGTAGCAAGATGGGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | CCTTCTGCACGTCCTTTGTCACTTGCACACACTCCATaGGAGGTAGCCTCACAGACTGGTTCCCGGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSARPLSLAHTP*EVASQTGSRRG Trigger: GCCTCTCCGGGAACCAGTCTGTGAGGCTACCTCTCATGGAGTGTGTGCAAGTGACAAAGGACGTGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 72 bp | AGCATCTTCAGCATCAGCCGCAGATTCAGCCACCACTaGTCCCGGGGCATGCGGTGCTCAAAATCAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SIFSISRRFSHH*SRGMRCSKSVS Trigger: AGAGACTGATTTTGAGCACCGCATGCCCCGGGAGCAGTGGTGGCTGAATCTGCGGCTGATGCTGAAGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | TCCAGTTGTTCTCAAAGCTCCTGCCACGGAGCTGGATaGCCTCGTCAAACCTCTCCTCGTCCATGGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSCSQSSCHGAG*PRQTSPRPWPS Trigger: AGAAGGCCATGGACGAGGAGAGGTTTGACGAGGCCATCCAGCTCCGTGGCAGGAGCTTTGAGAACAACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | TCCGCAGGCCGATCACACAGGCTGAGTCTGGAGCATTaGCAAACACCCGCCCTTTACGGTAGACATCACGTA | + |
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Preference number: 6 (lower is better) Translates to: SAGRSHRLSLEH*QTPALYGRHHV Trigger: TACGTGATGTCTACCGTAAAGGGCGGGTGTTTGCCAATGCTCCAGACTCAGCCTGTGTGATCGGCCTGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CAA 72 bp | GCTGGAGCCCCCACATTCAGGATGGCCAGGGAGAAGTaGGACTTCTCTTTAGACACCTTCTGGTGGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: AGAPTFRMAREK*DFSLDTFWWAR Trigger: CCTTGCCCACCAGAAGGTGTCTAAAGAGAAGTCCAACTTCTCCCTGGCCATCCTGAATGTGGGGGCTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS TCA 72 bp | CAGCCTCTGAACCACCAGATCCTTCACGTAGCTGGATaGGATAGGCTTTCCATGCCGGTCAATGGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: QPLNHQILHVAG*DRLSMPVNGTL Trigger: GAGGGTGCCATTGACCGGCATGGAAAGCCTATCTCATCCAGCTACGTGAAGGATCTGGTGGTTCAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 72 bp | TCCTCGTCCATGGCCTTCTGCACGTCCTTTGTCACTTaGACACACTCCATGAGAGGTAGCCTCACAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSMAFCTSFVT*THSMRGSLTDW Trigger: CCAGTCTGTGAGGCTACCTCTCATGGAGTGTGTGCAAGTGACAAAGGACGTGCAGAAGGCCATGGACGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS GCA 72 bp | CCCAGACACATAGTCTGCCATGCTGATGCGGTAGTGTaGCAGCATCTTCAGCATCAGCCGCAGATTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PRHIVCHADAVV*QHLQHQPQIQP Trigger: TGGCTGAATCTGCGGCTGATGCTGAAGATGCTGGCACACTACCGCATCAGCATGGCAGACTATGTGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | CAGCTGGATGATATTGGAAACGCTGAGCCAGTTGGCTaGCTTGATGTTCTCGCCTCCTTCCACAAGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLDDIGNAEPVG*LDVLASFHKAL Trigger: GAGGGCCTTGTGGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 ENSMUST00000218383.2 |
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| CDS CCA 72 bp | TTACAGCGGGCACTGCCAATAATGGTGCCACCCAGCTaGATGATATTGGAAACGCTGAGCCAGTTGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRALPIMVPPS*MILETLSQLAG Trigger: GCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACCATTATTGGCAGTGCCCGCTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 ENSMUST00000218383.2 |
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| CDS CAA 90 bp | TTACAGCGGGCACTGCCAATAATGGTGCCACCCAGCTGGATGATATaGGAAACGCTGAGCCAGTTGGCTGGCTTGATGTTCTCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQRALPIMVPPSWMI*ETLSQLAGLMFSPP Trigger: AGGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACCATTATTGGCAGTGCCCGCTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 ENSMUST00000218383.2 |
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| CDS TCA 72 bp | ATCACAACTCTCCATTGCAGCGTTGACAGCCGTGTCTaGGCCCAGGCTGAAGTCAGTGCCAGGCACATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ITTLHCSVDSRV*AQAEVSARHIV Trigger: AACAATGTGCCTGGCACTGACTTCAGCCTGGGCTCAGACACGGCTGTCAACGCTGCAATGGAGAGTTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CCA 72 bp | GGTAGACATCACGTAGCTTCTCAGACACCCACAACATaGCCTTCACCCCCAGTTTGGTCCCATAGTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRHHVASQTPTT*PSPPVWSHSSG Trigger: ACCGGAACTATGGGACCAAACTGGGGGTGAAGGCCATGTTGTGGGTGTCTGAGAAGCTACGTGATGTCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CAA 72 bp | TCCCGGGGCATGCGGTGCTCAAAATCAGTCTCTTTCTaGAGTTCTGTGACCGGACTGAAGGCCACTACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGMRCSKSVSF*SSVTGLKATTF Trigger: GAAGGTAGTGGCCTTCAGTCCGGTCACAGAACTCAAGAAAGAGACTGATTTTGAGCACCGCATGCCCCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020522.9 |
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| CDS CAA 72 bp | GCACTGCCAATAATGGTGCCACCCAGCTGGATGATATaGGAAACGCTGAGCCAGTTGGCTGGCTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: ALPIMVPPSWMI*ETLSQLAGLMF Trigger: GAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGGGTGGCACCATTATTGGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020522.9 ENSMUST00000145716.2 ENSMUST00000218383.2 |
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