Pregenerated sensors for PFKFB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025648Ensembl transcript IDs: ENSMUST00000051873.15, ENSMUST00000196249.5, ENSMUST00000198140.5, ENSMUST00000199591.5, ENSMUST00000200015.6
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGGGCTGTTCCAGCACAACTCCTGCTCCACTGACATCCCTCTaGCCCCACCCTGGGCTCTTACACCTCTGGGTCCATCAGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GRGCSSTTPAPLTSL*PHPGLLHLWVHQFL Trigger: CAGGAACTGATGGACCCAGAGGTGTAAGAGCCCAGGGTGGGGGCAGAGGGATGTCAGTGGAGCAGGAGTTGTGCTGGAACAGCCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR TCA 90 bp | GTATGGTCTTCCAGCTCCGAGCTAGGACATGGAGGTCTGAGGAGATaGGCCCAGGAGTCCCGCCCTAGGCCCGCACAGACAGCAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: VWSSSSELGHGGLRR*AQESRPRPAQTAVW Trigger: CCAAACTGCTGTCTGTGCGGGCCTAGGGCGGGACTCCTGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | ACTAGAGTGGGGCCAGCGACTCCTCCTGGGGTCTGGGCTGCCTCATaGCTTGTCCTTTCCTTCCTCAGTCCTACAGGTAGAGGCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: TRVGPATPPGVWAAS*LVLSFLSPTGRGQQ Trigger: TTGCTGGCCTCTACCTGTAGGACTGAGGAAGGAAAGGACAAGGCATGAGGCAGCCCAGACCCCAGGAGGAGTCGCTGGCCCCACTCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | TGCAAACGTCATGAAGCAGCCAGCCTGGTGAGTGGACTGCTCGAGTaGTGTAGCAGAGGGGCTGGCAGCAGAGCACATAGCCCAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: CKRHEAASLVSGLLE*CSRGAGSRAHSPGI Trigger: AATCCCTGGGCTATGTGCTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCTGGCTGCTTCATGACGTTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR CCA 90 bp | GGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCTAGCCACCCATaGCTTCAGGAGTGTTCCTGCATGGTGGCACCATCAGTACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GRWARLKVLSVASHP*LQECSCMVAPSVQQ Trigger: TTGCTGTACTGATGGTGCCACCATGCAGGAACACTCCTGAAGCCATGGGTGGCTAGCAACACTCAGAACCTTCAGCCTGGCCCACCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR TCA 90 bp | AAGATGGCCTGGAGTGACCCCTCTGACAGAGGTCAGGGTCACTGGTaGGCAGGGACTGTGACAAGGGCTTCCTCTGAAGGCCTGGATATG | + |
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Preference number: 1 (lower is better) Translates to: KMAWSDPSDRGQGHW*AGTVTRASSEGLDM Trigger: CATATCCAGGCCTTCAGAGGAAGCCCTTGTCACAGTCCCTGCTCACCAGTGACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
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| 3UTR CCA 90 bp | AAGAGTAGCTATGGAGAGGGCAGTAGAACTCTTCCAGGGGTTGCCTaGCCCCCATCAGGCAGCAGGGCCACAGTGGAATGTCTTAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: KSSYGEGSRTLPGVA*PPSGSRATVECLSE Trigger: CTCACTAAGACATTCCACTGTGGCCCTGCTGCCTGATGGGGGCCAGGCAACCCCTGGAAGAGTTCTACTGCCCTCTCCATAGCTACTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CCA 90 bp | CCATCTTCTGTTCCAGGCAGGGAAGGAAGGGCTTTCCACTTCACCTaGGGTGGTGTCCACATAAGGCCCCATGAAGATCAAGCCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PSSVPGREGRAFHFT*GGVHIRPHEDQASG Trigger: GCCAGAGGCTTGATCTTCATGGGGCCTTATGTGGACACCACCCCAGGTGAAGTGGAAAGCCCTTCCTTCCCTGCCTGGAACAGAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CCA 90 bp | GGAGTGTTCCTGCATGGTGGCACCATCAGTACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTGACAGAGGTCAGGGTCACTGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GVFLHGGTISTANTR*PGVTPLTEVRVTGE Trigger: CTCACCAGTGACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGTACTGATGGTGCCACCATGCAGGAACACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
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| 3UTR TCA 90 bp | AGTGTCTCATTTAAGGTTGCAAACGTCATGAAGCAGCCAGCCTGGTaGGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTGGCAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SVSFKVANVMKQPAW*VDCSSAVAEGLAAE Trigger: CTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCTTAAATGAGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR TCA 90 bp | CTGGCAGGGCTGGAAAAGGTGGACTATTCTGCCAGATTTGGGCTTTaGACGGTTCTTGGATGCAGGGCATGGCTTCCCCATGGCTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LAGLEKVDYSARFGL*TVLGCRAWLPHGCS Trigger: AGAGCAGCCATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | TTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTaGCTCAAGCTGCATCCAGCCATTATCCACAGTGGCCGACCACAG | + |
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Preference number: 1 (lower is better) Translates to: FLLSRGTEEKGFGGL*LKLHPAIIHSGRPQ Trigger: CTGTGGTCGGCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CCA 90 bp | CCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTaGTCTTTGCCTCAAGCTGCATCCAGCCATTATCCACAGTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: PSVPAFPGHRGKRLW*SLPQAASSHYPQWP Trigger: CGGCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CCA 90 bp | GGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTaGTGGTCTTTGCCTCAAGCTGCATCCAGCCATTATCCACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GPSVPAFPGHRGKRL*WSLPQAASSHYPQW Trigger: CCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | TGGCTTCCCCATGGCTGCTCTGTGGACACTAGAGCAACCAGTTACTaGTGTAGAAAGTTTCTTGCCCTGCTCCACAACCTGCCTATCACC | + |
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Preference number: 1 (lower is better) Translates to: WLPHGCSVDTRATSY*CRKFLALLHNLPIT Trigger: GGTGATAGGCAGGTTGTGGAGCAGGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTCTAGTGTCCACAGAGCAGCCATGGGGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CCA 90 bp | GAACGGTTCTTGGATGCAGGGCATGGCTTCCCCATGGCTGCTCTGTaGACACTAGAGCAACCAGTTACTGCTGTAGAAAGTTTCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: ERFLDAGHGFPMAAL*TLEQPVTAVESFLP Trigger: GGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTCTAGTGTCCACAGAGCAGCCATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR TCA 90 bp | AAATGGGAAGACAGTCCGACAGGACCACCAGTTCTGAGCCTCTCATaGCAAAGGCATGTCCCCGTTACCAGTGTACAGTTCTGTGTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: KWEDSPTGPPVLSLS*QRHVPVTSVQFCVD Trigger: GTCCACACAGAACTGTACACTGGTAACGGGGACATGCCTTTGTCATGAGAGGCTCAGAACTGGTGGTCCTGTCGGACTGTCTTCCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | AACGGCCAGGTAGGGGAGACCAGTTTCCATAAGCACTTTGGTGTGTaGACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: NGQVGETSFHKHFGV*TKKVLPKAALPLQD Trigger: ATCCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGTGCTTATGGAAACTGGTCTCCCCTACCTGGCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | TGGACACTAGAGCAACCAGTTACTGCTGTAGAAAGTTTCTTGCCCTaGTCCACAACCTGCCTATCACCTTGCTGGTCAGCTGAAACATGG | + |
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Preference number: 1 (lower is better) Translates to: WTLEQPVTAVESFLP*STTCLSPCWSAETW Trigger: CCATGTTTCAGCTGACCAGCAAGGTGATAGGCAGGTTGTGGAGCAGGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTCTAGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR GCA 90 bp | TCACTGAGGAACTTCCGGACATCACTGAGGGCTGCTAAGGCACACTaGTTCCTGATTTTCAGGCCTTCTTCATTGTCTGGGAGGAAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: SLRNFRTSLRAAKAH*FLIFRPSSLSGRKN Trigger: GTTTTTCCTCCCAGACAATGAAGAAGGCCTGAAAATCAGGAAGCAGTGTGCCTTAGCAGCCCTCAGTGATGTCCGGAAGTTCCTCAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
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| 3UTR TCA 90 bp | GATGTAGGACAGATCCCTGTCCAGGTCTTCATCCAGCGACTCATATaGGTTTTCATAGCATTCAATGCGCCTCATGAAGTCTTCGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: DVGQIPVQVFIQRLI*VFIAFNAPHEVFGG Trigger: GCCACCGAAGACTTCATGAGGCGCATTGAATGCTATGAAAACTCATATGAGTCGCTGGATGAAGACCTGGACAGGGATCTGTCCTACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCCCCACCCTGGGCTCTTACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGGGCAGATGGCAGCTaGAAGCTACACAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CPHPGLLHLWVHQFLLSRGADGS*KLHSPG Trigger: TCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCCC...CCGGGAAAGCAGGAACTGATGGACCCAGAGGTGTAAGAGCCCAGGGTGGGGGCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAACGTCACTCAGACTCTGAGGGACACGGGGCAGAAGCTGCAGGGCCCATGTCTTCCAGGGGTTGCCTaGCCCCCATCAGGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MNVTQTLRDTGQKLQGPCLPGVA*PPSGSR Trigger: CCTGCTGCCTGATGGGGGCCAGGCAACCCCTGGAAG...ACATGGGCCCTGCAGCTTCTGCCCCGTGTCCCTCAGAGTCTGAGTGACGTTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGAGTGGACTGCTCGAGTaGTGTAGCAGAGGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SSHTQPVTGGQQRGRWARSGLLE*CSRGAG Trigger: GCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACT...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR GCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTAGTGGACTGCTCGAGTaGTGTAGCAGAGGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGSGLLE*CSRGAG Trigger: GCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACT...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR CCA 90 bp | ACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTCTTCCAGGGGTTGCCTaGCCCCCATCAGGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TPLGPSVPAFPGHRGKRLLPGVA*PPSGSR Trigger: CCTGCTGCCTGATGGGGGCCAGGCAACCCCTGGAAG...AAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGATGGCAGCTGCAAGCTACACAGCCCAGGACTGGCAGGGCTGGAAAAGGCCACACTTACTCTCCTaGGTACCCACAGATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GQMAAASYTAQDWQGWKRPHLLS*VPTDAE Trigger: CTCTGCATCTGTGGGTACTCAGGAGAGTAAGTGTGG...CCTTTTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR CCA 90 bp | CACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCCAACAAAGAGGCCGGTaGGCCAGGCTGAAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HWWSTKRPVGQAEGSECCQQRGR*ARLKVL Trigger: CAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG...GCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCACTCCTCCTGGGGTCTaGGCTGCCTCATGCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GSISSCFPGAQRKKALVVTPPGV*AASCLV Trigger: GACAAGGCATGAGGCAGCCCAGACCCCAGGAGGAGT...GACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR GCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAGTGGACTGCTCGAGTaGTGTAGCAGAGGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVSGLLE*CSRGAG Trigger: GCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSHTQPVTGGQQRGRWARTANTR*PGVTPL Trigger: CAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGT...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCCTAGGCCCGCACAGACAGCAGTTTGGAATAATGGCACTGACTTCTCAGCAACAAAGAGGCCGGTaGGCCAGGCTGAAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PALGPHRQQFGIMALTSQQQRGR*ARLKVL Trigger: CAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG...CTGAGAAGTCAGTGCCATTATTCCAAACTGCTGTCTGTGCGGGCCTAGGGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR TCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTATGTCCCGGCGATACTaGCCAACGTTGAATTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGMSRRY*PTLNSR Trigger: TCGGGAATTCAACGTTGGTCAGTATCGCCGGGACAT...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
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| 3UTR-3UTR CCA 90 bp | CCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PTCHWWSTKRPVGQAEGSTANTR*PGVTPL Trigger: CAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGT...AGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGGAAGTAGGCCAACAAAGAGGCCGGTaGGCCAGGCTGAAGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGAFEVGQLFSCLVKEVGQQRGR*ARLKVL Trigger: CAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG...GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
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| 3UTR-3UTR CCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTGTAGAGGCCAGCAAATaGGAAGACAGTCCGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGVEASK*EDSPTG Trigger: TCCTGTCGGACTGTCTTCCCATTTGCTGGCCTCTAC...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAGCTCCCAGGGCTGGAAAAGGTaGACTATTCTGCCAGATTTG | + |
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Preference number: 2 (lower is better) Translates to: GRSCRAHVPKAVVWSSSSQGWKR*TILPDL Trigger: CAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTG...GGAGCTGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CAA 90 bp | ACTGGCAGGGCTGGAAAAGGTGGACTATTCTGCCAGATTTGGGCTTaGAACGGTTCTTGGATGCAGGGCATGGCTTCCCCATGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TGRAGKGGLFCQIWA*NGSWMQGMASPWLL Trigger: GAGCAGCCATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR CAA 90 bp | GTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTaGCCTCAAGCTGCATCCAGCCATTATCCACAGTGGCCGACCACA | + |
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Preference number: 2 (lower is better) Translates to: VPAFPGHRGKRLWWS*PQAASSHYPQWPTT Trigger: TGTGGTCGGCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGAGGTTGCAAACGTCATaGAGCAGCCAGCCTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWRLQTS*SSQPGE Trigger: CTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCT...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATGGTCTTCCAGCTCCGAGCTAGGACATGGAGGTCTGAGGAGATGAGCCCACTGAAACATGGAGCCTaGCTCTGCTATGTGGACCCA | + |
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Preference number: 2 (lower is better) Translates to: GMVFQLRARTWRSEEMSPLKHGA*LCYVDP Trigger: TGGGTCCACATAGCAGAGTCAGGCTCCATGTTTCAG...TGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTTGGAATAATGGCACTGACTTCTCAGGGGCAGATGGCAGCTGCAAGCTAAGTGGACTGCTCGAGTaGTGTAGCAGAGGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: AVWNNGTDFSGADGSCKLSGLLE*CSRGAG Trigger: GCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACT...TAGCTTGCAGCTGCCATCTGCCCCTGAGAAGTCAGTGCCATTATTCCAAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCTTCCAGCTCCGAGCTAGGACATGGAGGTCTGAGGAGATGAGCCCAGGAACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: MVFQLRARTWRSEEMSPGTANTR*PGVTPL Trigger: CAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGT...TCCTGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| 3UTR-3UTR CCA 90 bp | TATGTGGACCCACAAGAACTCGGGGCATGGGAGGCACCAGGCTTCATAAGGCTGACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YVDPQELGAWEAPGFIRLTANTR*PGVTPL Trigger: CAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGT...CAGCCTTATGAAGCCTGGTGCCTCCCATGCCCCGAGTTCTTGTGGGTCCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAACAAAGAGGCCGGTaGGCCAGGCTGAAGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FPGAQRKKALVVFASSCIQQRGR*ARLKVL Trigger: CAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG...GATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTTACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAGCTTTCCACTTCACCTaGGGTGGTGTCCACATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSYTSGSISSCFPGAQRKAFHFT*GGVHIR Trigger: CCTTATGTGGACACCACCCCAGGTGAAGTGGAAAGC...TTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGTAAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCCATTATCCACAGTGGCCGACTCCGAGCTAGGACATaGAGGTCTGAGGAGATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GFGGLCLKLHPAIIHSGRLRART*RSEEMS Trigger: GCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAG...TCGGCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCAGGTTGCAAACGTCATaGAGCAGCCAGCCTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FPGAQRKKALVVFASSCIRLQTS*SSQPGE Trigger: CTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCT...GATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAACCCCTGAACCAACTCAGCCTGAAACATGGAGCCTaGCTCTGCTATGTGGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: RESRKCRQSACEPLNQLSLKHGA*LCYVDP Trigger: TGGGTCCACATAGCAGAGTCAGGCTCCATGTTTCAG...GCTGAGTTGGTTCAGGGGTTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGTAGCTATGGAGAGGGCAGTAGAACTCTTCCAGGGGTTGCCTGGCCCCCAGCAGCAGGGCCACAGTaGAATGTCTTAGTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KSSYGEGSRTLPGVAWPPAAGPQ*NVLVRV Trigger: AACTCTCACTAAGACATTCCACTGTGGCCCTGCTGC...TGGGGGCCAGGCAACCCCTGGAAGAGTTCTACTGCCCTCTCCATAGCTACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | CCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCGCAGCAGGGCCACAGTaGAATGTCTTAGTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PGHRGKRLWWSLPQAASSAAGPQ*NVLVRV Trigger: AACTCTCACTAAGACATTCCACTGTGGCCCTGCTGC...GCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTGCTTTCCACTTCACCTaGGGTGGTGTCCACATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TPLGPSVPAFPGHRGKRLAFHFT*GGVHIR Trigger: CCTTATGTGGACACCACCCCAGGTGAAGTGGAAAGC...AAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTGGTCAGCTGAAACATaGAGCCTGACTCTGCTATGT | + |
|
Preference number: 2 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGWSAET*SLTLLC Trigger: ACATAGCAGAGTCAGGCTCCATGTTTCAGCTGACCA...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAACCGTAAGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGGGGCTAAGACAAGAGTaGAGAGCACCTTGGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TTVSHGCELQDCVQGAFEGLRQE*RAPWSE Trigger: CTCACTCCAAGGTGCTCTCCACTCTTGTCTTAGCCC...CTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCTTACGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTTTGGAATAATGGCACTGACTTCTCAGGGGCAGATGGCAGCTGCAAGCTAAGGTTGCAAACGTCATaGAGCAGCCAGCCTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: AVWNNGTDFSGADGSCKLRLQTS*SSQPGE Trigger: CTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCT...TAGCTTGCAGCTGCCATCTGCCCCTGAGAAGTCAGTGCCATTATTCCAAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTTTGGAATAATGGCACTGACTTCTCAGGGGCAGATGGCAGCTGCAAGCTAGTCTGGGCTGCCTCATaGCTTGTCCTTTCCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AVWNNGTDFSGADGSCKLVWAAS*LVLSFL Trigger: GAGGAAGGAAAGGACAAGGCATGAGGCAGCCCAGAC...TAGCTTGCAGCTGCCATCTGCCCCTGAGAAGTCAGTGCCATTATTCCAAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCGTAGAGGCCAGCAAATaGGAAGACAGTCCGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FPGAQRKKALVVFASSCIVEASK*EDSPTG Trigger: TCCTGTCGGACTGTCTTCCCATTTGCTGGCCTCTAC...GATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTCTTCCTCTGAAGGCCTaGATATGTCTACATTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGLPLKA*ICLHSE Trigger: CTCAGAATGTAGACATATCCAGGCCTTCAGAGGAAG...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAACCCCTGAACCAACTCAGCCAGGGCTGGAAAAGGTaGACTATTCTGCCAGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: RESRKCRQSACEPLNQLSQGWKR*TILPDL Trigger: CAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTG...GCTGAGTTGGTTCAGGGGTTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTTTGGAATAATGGCACTGACTTCTCAGGGGCAGATGGCAGCTGCAAGCTACAGGACTGGCAGGGCTaGAAAAGGTGGACTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AVWNNGTDFSGADGSCKLQDWQG*KRWTIL Trigger: CAGAATAGTCCACCTTTTCCAGCCCTGCCAGTCCTG...TAGCTTGCAGCTGCCATCTGCCCCTGAGAAGTCAGTGCCATTATTCCAAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTCTTCCAGCTCCGAGCTAGGACATGGAGGTCTGAGGAGATGAGCCCAGGAGCACAGACAGCAGTTTaGAATAATGGCACTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: MVFQLRARTWRSEEMSPGAQTAV*NNGTDF Trigger: GAAGTCAGTGCCATTATTCCAAACTGCTGTCTGTGC...TCCTGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAACCGTAAGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGTGGTCACTGATGAACTaGGCCAGATGCTTGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TTVSHGCELQDCVQGAFEWSLMN*ARCLEN Trigger: GTTTTCCAAGCATCTGGCCCAGTTCATCAGTGACCA...CTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCTTACGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGAAGATTTGTACGTCTTaGCTATGTCCCGGCGATACT | + |
|
Preference number: 2 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWKICTS*LCPGDT Trigger: AGTATCGCCGGGACATAGTCAAGACGTACAAATCTT...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTGTGTGCAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGCATCCAAAGAAAGGATaGAGATCCAGGGCTAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: DCVQGAFEVGQLFSCLVKHPKKG*RSRAKT Trigger: TGTCTTAGCCCTGGATCTTCATCCTTTCTTTGGATG...CTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTGCACACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTGGTGTGTGCACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGTGGGTAGAAGCTCCCTaGTCCATCTTCTGTTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TLVCAPRRYFLKLPCLYRWVEAP*SIFCSR Trigger: CCTGGAACAGAAGATGGAGCAGGGAGCTTCTACCCA...CCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAACCCCTGAACCAACTCAGCGCACAGACAGCAGTTTaGAATAATGGCACTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: RESRKCRQSACEPLNQLSAQTAV*NNGTDF Trigger: GAAGTCAGTGCCATTATTCCAAACTGCTGTCTGTGC...GCTGAGTTGGTTCAGGGGTTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR TCA 90 bp | CCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCGACTCAATTTGTACTTaGATCAAAACTAGAGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PGHRGKRLWWSLPQAASSDSICT*IKTRVG Trigger: CCCCACTCTAGTTTTGATTCAAGTACAAATTGAGTC...GCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAAGTTGCTAGCCACCCATaGCTTCAGGAGTGTTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRIIHSRESRKCRQSACEVASHP*LQECSC Trigger: GCAGGAACACTCCTGAAGCCATGGGTGGCTAGCAAC...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAACTCCGAGCTAGGACATaGAGGTCTGAGGAGATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TRIIHSRESRKCRQSACELRART*RSEEMS Trigger: GCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAG...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAAAGCCATTATCCACAGTaGCCGACCACAGGCATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRIIHSRESRKCRQSACESHYPQ*PTTGIC Trigger: GCAGATGCCTGTGGTCGGCCACTGTGGATAATGGCT...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAACAGGACTGGCAGGGCTaGAAAAGGTGGACTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRIIHSRESRKCRQSACEQDWQG*KRWTIL Trigger: CAGAATAGTCCACCTTTTCCAGCCCTGCCAGTCCTG...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | CCCATGCGACTGCCTTGCGGAAGCCACTTCAGGGGCTaGAGGGAGGGGCTGTTCCAGCACAACTCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PMRLPCGSHFRG*REGLFQHNSCS Trigger: GGAGCAGGAGTTGTGCTGGAACAGCCCCTCCCTCCAGCCCCTGAAGTGGCTTCCGCAAGGCAGTCGCATGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR TCA 72 bp | TCCAGCTCCGAGCTAGGACATGGAGGTCTGAGGAGATaGGCCCAGGAGTCCCGCCCTAGGCCCGCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSSELGHGGLRR*AQESRPRPAQT Trigger: TGTCTGTGCGGGCCTAGGGCGGGACTCCTGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | GGCAGTGGTATGGTCTTCCAGCTCCGAGCTAGGACATaGAGGTCTGAGGAGATGAGCCCAGGAGTCCCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSGMVFQLRART*RSEEMSPGVPP Trigger: GGGCGGGACTCCTGGGCTCATCTCCTCAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCATACCACTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCCCACCCTGGGCTCTTACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGGCTGCCTCATGCCTaGTCCTTTCCTTCCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPHPGLLHLWVHQFLLSRGLPHA*SFPSSV Trigger: GACTGAGGAAGGAAAGGACAAGGCATGAGGCAGCCC...CCGGGAAAGCAGGAACTGATGGACCCAGAGGTGTAAGAGCCCAGGGTGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | CACGGGGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAGGCTTTGAACGGTTCTaGGATGCAGGGCATGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGAEAAGPMSRRQWYGLPGFERF*DAGHGF Trigger: GAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCC...TGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCCCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTGGCACGCCAATCCAGTaGAGGTACCGCGTCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGGTPIQ*RYRVSF Trigger: GAAGCTGACGCGGTACCTCAACTGGATTGGCGTGCC...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR CCA 72 bp | CAGGAGTCCCGCCCTAGGCCCGCACAGACAGCAGTTTaGAATAATGGCACTGACTTCTCAGGGGCAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: QESRPRPAQTAV*NNGTDFSGADG Trigger: GCCATCTGCCCCTGAGAAGTCAGTGCCATTATTCCAAACTGCTGTCTGTGCGGGCCTAGGGCGGGACTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | AGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATaGTCTTCCAGCTCCGAGCTAGGACATGGAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSCRAHVPKAVV*SSSSELGHGGL Trigger: CAGACCTCCATGTCCTAGCTCGGAGCTGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAACCGTAAGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGAACTGGGCCAGATGCTaGGAAAACTCCCGGCCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: TTVSHGCELQDCVQGAFENWARC*ENSRPR Trigger: CCGGGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTT...CTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCTTACGGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR-3UTR CAA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTGGCTTTGAACGGTTCTaGGATGCAGGGCATGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGGFERF*DAGHGF Trigger: GAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCC...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | AGGGATTCTCAGCAGCCATACCCAACCTGTCACTGGTaGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RDSQQPYPTCHW*STKRPVGQAEG Trigger: ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR CCA 72 bp | GGGCAGATGGCAGCTGCAAGCTACACAGCCCAGGACTaGCAGGGCTGGAAAAGGTGGACTATTCTGCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GQMAAASYTAQD*QGWKRWTILPD Trigger: ATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | AATAATGGCACTGACTTCTCAGGGGCAGATGGCAGCTaGAAGCTACACAGCCCAGGACTGGCAGGGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NNGTDFSGADGS*KLHSPGLAGLE Trigger: TTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCCCTGAGAAGTCAGTGCCATTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | ACCCTGGGCTCTTACACCTCTGGGTCCATCAGTTCCTaGTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLGSYTSGSISS*FPGAQRKKALV Trigger: CACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGTAAGAGCCCAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | TGGTGGCACCATCAGTACAGCAAACACAAGATGGCCTaGAGTGACCCCTCTGACAGAGGTCAGGGTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WWHHQYSKHKMA*SDPSDRGQGHW Trigger: CCAGTGACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGTACTGATGGTGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
||
| 3UTR CCA 72 bp | CTGCATGGTGGCACCATCAGTACAGCAAACACAAGATaGCCTGGAGTGACCCCTCTGACAGAGGTCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHGGTISTANTR*PGVTPLTEVRV Trigger: GACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCTGTACTGATGGTGCCACCATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
||
| 3UTR TCA 72 bp | TTTAAGGTTGCAAACGTCATGAAGCAGCCAGCCTGGTaGGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FKVANVMKQPAW*VDCSSAVAEGL Trigger: CAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR TCA 72 bp | TGTCCCCGTTACCAGTGTACAGTTCTGTGTGGACAGTaGCAGCAACGGCCAGGTAGGGGAGACCAGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CPRYQCTVLCGQ*QQRPGRGDQFP Trigger: TGGAAACTGGTCTCCCCTACCTGGCCGTTGCTGTCACTGTCCACACAGAACTGTACACTGGTAACGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR TCA 72 bp | GCCTATCACCTTGCTGGTCAGCTGAAACATGGAGCCTaGCTCTGCTATGTGGACCCACAAGAACTCGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AYHLAGQLKHGA*LCYVDPQELGA Trigger: TGCCCCGAGTTCTTGTGGGTCCACATAGCAGAGTCAGGCTCCATGTTTCAGCTGACCAGCAAGGTGATAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR TCA 72 bp | CTGACAGAGGTCAGGGTCACTGGTGAGCAGGGACTGTaGCAAGGGCTTCCTCTGAAGGCCTGGATATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LTEVRVTGEQGL*QGLPLKAWICL Trigger: TAGACATATCCAGGCCTTCAGAGGAAGCCCTTGTCACAGTCCCTGCTCACCAGTGACCCTGACCTCTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
||
| 3UTR GCA 72 bp | TCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTaGCTCAAGCTGCATCCAGCCATTATCCACAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRGTEEKGFGGL*LKLHPAIIHSG Trigger: GCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | GTTCCAGGCAGGGAAGGAAGGGCTTTCCACTTCACCTaGGGTGGTGTCCACATAAGGCCCCATGAAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPGREGRAFHFT*GGVHIRPHEDQ Trigger: TTGATCTTCATGGGGCCTTATGTGGACACCACCCCAGGTGAAGTGGAAAGCCCTTCCTTCCCTGCCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR TCA 72 bp | GCAAATGGGAAGACAGTCCGACAGGACCACCAGTTCTaGGCCTCTCATGACAAAGGCATGTCCCCGTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: ANGKTVRQDHQF*ASHDKGMSPLP Trigger: TGGTAACGGGGACATGCCTTTGTCATGAGAGGCTCAGAACTGGTGGTCCTGTCGGACTGTCTTCCCATTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | CCCAGGACTGGCAGGGCTGGAAAAGGTGGACTATTCTaGCAGATTTGGGCTTTGAACGGTTCTTGGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRTGRAGKGGLF*QIWALNGSWMQ Trigger: CTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCCAGTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | TTGCTAGCCACCCATGGCTTCAGGAGTGTTCCTGCATaGTGGCACCATCAGTACAGCAAACACAAGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLATHGFRSVPA*WHHQYSKHKMA Trigger: GGCCATCTTGTGTTTGCTGTACTGATGGTGCCACCATGCAGGAACACTCCTGAAGCCATGGGTGGCTAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR CCA 72 bp | GGACTATTCTGCCAGATTTGGGCTTTGAACGGTTCTTaGATGCAGGGCATGGCTTCCCCATGGCTGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GLFCQIWALNGS*MQGMASPWLLC Trigger: ACAGAGCAGCCATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | GGCAGGGCTGGAAAAGGTGGACTATTCTGCCAGATTTaGGCTTTGAACGGTTCTTGGATGCAGGGCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GRAGKGGLFCQI*ALNGSWMQGMA Trigger: AGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | AGCTACACAGCCCAGGACTGGCAGGGCTGGAAAAGGTaGACTATTCTGCCAGATTTGGGCTTTGAACGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SYTAQDWQGWKR*TILPDLGFERF Trigger: GAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | CCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTaGTCTTTGCCTCAAGCTGCATCCAGCCATTATCCA | + |
|
Preference number: 3 (lower is better) Translates to: PAFPGHRGKRLW*SLPQAASSHYP Trigger: TGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGGTAGGGCAGAAAGATTTGTACGTCTaGACTATGTCCCGGCGATAC | + |
|
Preference number: 3 (lower is better) Translates to: SHGCELQDCVQGAFEVGQKDLYV*TMSRRY Trigger: GTATCGCCGGGACATAGTCAAGACGTACAAATCTTT...CTGCCCTACCTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR CCA 72 bp | ACTAGGACTCAATTTGTACTTGAATCAAAACTAGAGTaGGGCCAGCGACTCCTCCTGGGGTCTGGGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRTQFVLESKLE*GQRLLLGSGLP Trigger: AGGCAGCCCAGACCCCAGGAGGAGTCGCTGGCCCCACTCTAGTTTTGATTCAAGTACAAATTGAGTCCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | TTGGATGCAGGGCATGGCTTCCCCATGGCTGCTCTGTaGACACTAGAGCAACCAGTTACTGCTGTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LDAGHGFPMAAL*TLEQPVTAVES Trigger: ACTTTCTACAGCAGTAACTGGTTGCTCTAGTGTCCACAGAGCAGCCATGGGGAAGCCATGCCCTGCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | GTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTaGTGGTCTTTGCCTCAAGCTGCATCCAGCCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: VPAFPGHRGKRL*WSLPQAASSHY Trigger: ATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGGAAGTAGGCTTCAGGCCTTCTTCATaGTCTGGGAGGAAAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: QGAFEVGQLFSCLVKEVGFRPSS*SGRKNS Trigger: TGAGTTTTTCCTCCCAGACAATGAAGAAGGCCTGAA...GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR TCA 72 bp | CTGGAAAAGGTGGACTATTCTGCCAGATTTGGGCTTTaGACGGTTCTTGGATGCAGGGCATGGCTTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LEKVDYSARFGL*TVLGCRAWLPH Trigger: ATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | AGTGTTGCTAGCCACCCATGGCTTCAGGAGTGTTCCTaGATGGTGGCACCATCAGTACAGCAAACACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVASHPWLQECS*MVAPSVQQTQD Trigger: ATCTTGTGTTTGCTGTACTGATGGTGCCACCATGCAGGAACACTCCTGAAGCCATGGGTGGCTAGCAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR GCA 72 bp | GTAGGGGAGACCAGTTTCCATAAGCACTTTGGTGTGTaGACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGETSFHKHFGV*TKKVLPKAALP Trigger: AGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGTGCTTATGGAAACTGGTCTCCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | GAGCAACCAGTTACTGCTGTAGAAAGTTTCTTGCCCTaGTCCACAACCTGCCTATCACCTTGCTGGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EQPVTAVESFLP*STTCLSPCWSA Trigger: AGCTGACCAGCAAGGTGATAGGCAGGTTGTGGAGCAGGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR GCA 72 bp | CATGGCTGCTCTGTGGACACTAGAGCAACCAGTTACTaGTGTAGAAAGTTTCTTGCCCTGCTCCACAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGCSVDTRATSY*CRKFLALLHNL Trigger: CAGGTTGTGGAGCAGGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTCTAGTGTCCACAGAGCAGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CCA 72 bp | CAAAGAAAGGATGAAGATCCAGGGCTAAGACAAGAGTaGAGAGCACCTTGGAGTGAGGCCTGGCCATATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRKDEDPGLRQE*RAPWSEAWPYE Trigger: CTCATATGGCCAGGCCTCACTCCAAGGTGCTCTCCACTCTTGTCTTAGCCCTGGATCTTCATCCTTTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| 3UTR TCA 72 bp | TTTGTCTCAGTGTCTCATTTAAGGTTGCAAACGTCATaGAGCAGCCAGCCTGGTGAGTGGACTGCTCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FVSVSHLRLQTS*SSQPGEWTARV Trigger: CACTCGAGCAGTCCACTCACCAGGCTGGCTGCTTCATGACGTTTGCAACCTTAAATGAGACACTGAGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR TCA 72 bp | AAAGATTTGTACGTCTTGACTATGTCCCGGCGATACTaGCCAACGTTGAATTCCCGAGTAGGCACGCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KDLYVLTMSRRY*PTLNSRVGTPI Trigger: GATTGGCGTGCCTACTCGGGAATTCAACGTTGGTCAGTATCGCCGGGACATAGTCAAGACGTACAAATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAAGTTTCCATAAGCACTTaGGTGTGTGCACCAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRIIHSRESRKCRQSACEVSIST*VCAPRR Trigger: CCTTCTTGGTGCACACACCAAAGTGCTTATGGAAAC...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR TCA 72 bp | CAGATCCCTGTCCAGGTCTTCATCCAGCGACTCATATaGGTTTTCATAGCATTCAATGCGCCTCATGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QIPVQVFIQRLI*VFIAFNAPHEV Trigger: GACTTCATGAGGCGCATTGAATGCTATGAAAACTCATATGAGTCGCTGGATGAAGACCTGGACAGGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR GCA 72 bp | CGGGGCATGGGAGGCACCAGGCTTCATAAGGCTGTTTaGACTAGGACTCAATTTGTACTTGAATCAAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: RGMGGTRLHKAV*TRTQFVLESKL Trigger: TAGTTTTGATTCAAGTACAAATTGAGTCCTAGTGCAAACAGCCTTATGAAGCCTGGTGCCTCCCATGCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAGATGGCAGCTGCAAGCTACACAGCCCAGGACTGGCAGGGCTGGAAAAGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GQMAAASYTAQDWQGWKRRAERA*HCCTAS Trigger: GGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACG...CCTTTTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | CACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCAGACACCACGCTGGCTaGCGTGCAGAGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HWWSTKRPVGQAEGSECCRHHAG*RAERAC Trigger: GCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCT...GCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCGTCGCTGTCCCGGTTaGCATAGTCAGGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHTQPVTGGQQRGRWARRRCPG*HSQGCP Trigger: TGGGCAGCCCTGACTATGTCAACCGGGACAGCGACG...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAGCTCCCACCAATCCGGCCCTTaGGGTTTAGCTCGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRSCRAHVPKAVVWSSSSHQSGP*GLARSP Trigger: GGGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTG...GGAGCTGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGTGAGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTGGCAGCAGAGCAGCCGGCAGAGGTAGATaGAGCGGGGTGTCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVSGLLECCSRGAGSRAAGRGR*SGVSHG Trigger: TCCATGTGACACCCCGCTCCATCTACCTCTGCCGGC...TGCTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGCACACCACGCTGGCTaGCGTGCAGAGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVAHHAG*RAERAC Trigger: GCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGC...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS-3UTR CCA 90 bp | CATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGATGCAGACACCACGCTaGCTGGCGTGCAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTQPVTGGQQRGRWARLKMQTPR*LACRAG Trigger: GCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCAT...CTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | CACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCCGTCGCTGTCCCGGTTaGCATAGTCAGGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HWWSTKRPVGQAEGSECCRRCPG*HSQGCP Trigger: TGGGCAGCCCTGACTATGTCAACCGGGACAGCGACG...GCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | CACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HWWSTKRPVGQAEGSECCRAERA*HCCTAS Trigger: GGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACG...GCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGGCCGGCAGAGGTAGATaGAGCGGGGTGTCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHTQPVTGGQQRGRWARAGRGR*SGVSHG Trigger: TCCATGTGACACCCCGCTCCATCTACCTCTGCCGGC...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAGCAGCACACCACGCTaGCTGGCGTGCAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVSSTPR*LACRAG Trigger: GCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAACACAAGATGGCCTGGAGTGACCCCTCTGACAGAGGTCAGGGTCACTGGATGCAGACACCACGCTaGCTGGCGTGCAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKHKMAWSDPSDRGQGHWMQTPR*LACRAG Trigger: GCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCAT...CCAGTGACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGTGAGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTGGCAGCAGAGCAATGAACTGGGCCAGATaGTTGGAAAACTCCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVSGLLECCSRGAGSRAMNWAR*LENSRP Trigger: GGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTTCAT...TGCTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGTGAGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTGGCAGCAGAGCAGGGCAGCTCTTCAGCTaGCTTGTCAAGGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVSGLLECCSRGAGSRAGQLFS*LVKEVG Trigger: GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCC...TGCTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTGTGTGCACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGGGGCACCACGCTGGCTaGCGTGCAGAGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLVCAPRRYFLKLPCLYRGHHAG*RAERAC Trigger: GCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGCCC...CCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
||
| CDS-3UTR CCA 90 bp | TTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCAGACACCACGCTGGCTaGCGTGCAGAGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGAQRKKALVVFASSCIRHHAG*RAERAC Trigger: GCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCT...GATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | CACGGGGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAATGTCCCGGCGATACTaGCCAACGTTGAATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGAEAAGPMSRRQWYGLPMSRRY*PTLNSR Trigger: TCGGGAATTCAACGTTGGTCAGTATCGCCGGGACAT...TGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCCCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | ACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTCGTCGCTGTCCCGGTTaGCATAGTCAGGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLGPSVPAFPGHRGKRLRRCPG*HSQGCP Trigger: TGGGCAGCCCTGACTATGTCAACCGGGACAGCGACG...AAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAGCTCCATGCGACTCTGGATGTaGTCAGCAACACGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRSCRAHVPKAVVWSSSSMRLWM*SATRFT Trigger: GGTGAACCGTGTTGCTGATCACATCCAGAGTCGCAT...GGAGCTGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | CATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGTACCGGTACTTGTCCTaGTCCCGCAGGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQPVTGGQQRGRWARLKYRYLS*SRRANS Trigger: GGAGTTTGCCCTGCGGGATCAGGACAAGTACCGGTA...CTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | CCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTCGTAAGCCACGGGTGTaGGCTTCAGGACTGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTCHWWSTKRPVGQAEGSRKPRV*ASGLCA Trigger: TGCACACAGTCCTGAAGCTCACACCCGTGGCTTACG...AGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | CAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCTAGCCACCCACGTAAGCCACGGGTGTaGGCTTCAGGACTGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQRGRWARLKVLSVASHPRKPRV*ASGLCA Trigger: TGCACACAGTCCTGAAGCTCACACCCGTGGCTTACG...TGGGTGGCTAGCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR GCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGERACH*CTASRS Trigger: AGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTC...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGATGTCCCGGCGATACTaGCCAACGTTGAATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHTQPVTGGQQRGRWARMSRRY*PTLNSR Trigger: TCGGGAATTCAACGTTGGTCAGTATCGCCGGGACAT...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGCACCAATCCGGCCCTTaGGGTTTAGCTCGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWHQSGP*GLARSP Trigger: GGGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTG...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGGACGGTACTTGTCCTaGTCCCGCAGGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWGRYLS*SRRANS Trigger: GGAGTTTGCCCTGCGGGATCAGGACAAGTACCGTCC...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | ATGAACGTCACTCAGACTCTGAGGGACACGGGGCAGAAGCTGCAGGGCCCATGTATGAACTGGGCCAGATaGTTGGAAAACTCCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MNVTQTLRDTGQKLQGPCMNWAR*LENSRP Trigger: GGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTTCAT...ACATGGGCCCTGCAGCTTCTGCCCCGTGTCCCTCAGAGTCTGAGTGACGTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR GCA 90 bp | CCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGGGCAGCTCTTCAGCTaGCTTGTCAAGGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCHWWSTKRPVGQAEGSGQLFS*LVKEVG Trigger: GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCC...AGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCCGCAGCTCTCCTGTATTCCAGTGTATAACTTGGTAGACGTTAGGCACCAATCCGGCCCTTaGGGTTTAGCTCGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPQLSCIPVYNLVDVRHQSGP*GLARSP Trigger: GGGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTG...CCTAACGTCTACCAAGTTATACACTGGAATACAGGAGAGCTGCGGCCCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTACCGGTACTTGTCCTaGTCCCGCAGGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSVPAFPGHRGKRLWWSYRYLS*SRRANS Trigger: GGAGTTTGCCCTGCGGGATCAGGACAAGTACCGGTA...AGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | ACAACCGTAAGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGTACCGGTACTTGTCCTaGTCCCGCAGGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVSHGCELQDCVQGAFEYRYLS*SRRANS Trigger: GGAGTTTGCCCTGCGGGATCAGGACAAGTACCGGTA...CTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCTTACGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| CDS-3UTR TCA 90 bp | CACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCGACAAGGGCTTCCTCTaGAGGCCTGGATATGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HWWSTKRPVGQAEGSECCDKGFL*RPGYVY Trigger: GTAGACATATCCAGGCCTTCAGAGGAAGCCCTTGTC...GCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTGGTGAGCAGGGACTGTaGCAAGGGCTTCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSVPAFPGHRGKRLWWSGEQGL*QGLPLK Trigger: CTTCAGAGGAAGCCCTTGTCACAGTCCCTGCTCACC...AGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCCATTATCCACAGTGGCCGAGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFGGLCLKLHPAIIHSGRERACH*CTASRS Trigger: AGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTC...TCGGCCACTGTGGATAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR GCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWERACH*CTASRS Trigger: AGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTC...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | GGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCGGGCAGCTCTTCAGCTaGCTTGTCAAGGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSISSCFPGAQRKKALVVGQLFS*LVKEVG Trigger: GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCC...GACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | AGCCACGGGTGTGAGCTTCAGGACTGTGTGCAAGGGGCATTTGAGGTAGGGCAGTTCTTCAGGGGATTCTaGGTCAGTTCCCGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHGCELQDCVQGAFEVGQFFRGF*VSSRGD Trigger: GTCTCCACGGGAACTGACCCAGAATCCCCTGAAGAA...CTGCCCTACCTCAAATGCCCCTTGCACACAGTCCTGAAGCTCACACCCGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| 3UTR CAA 72 bp | CCTGGGCCGCAGCTCTCCTGTATTCCAGTGTATAACTaGGTAGACGTTAGGAATGGGCGCCACGCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPQLSCIPVYN*VDVRNGRHAWS Trigger: GGACCATGCGTGGCGCCCATTCCTAACGTCTACCAAGTTATACACTGGAATACAGGAGAGCTGCGGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | TGGGCGCCACGCATGGTCCTTTCCACACTTACTCTCCTGAGTACCCACAGATGCATGTCCCGGCGATACTaGCCAACGTTGAATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WAPRMVLSTLTLLSTHRCMSRRY*PTLNSR Trigger: TCGGGAATTCAACGTTGGTCAGTATCGCCGGGACAT...GCATCTGTGGGTACTCAGGAGAGTAAGTGTGGAAAGGACCATGCGTGGCGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGAGGCACACTGCTTCCTaGTTTTCAGGCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHTQPVTGGQQRGRWARRHTAS*FSGLLH Trigger: ATGAAGAAGGCCTGAAAATCAGGAAGCAGTGTGCCT...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCCGCAGCTCTCCTGTATTCCAGTGTATAACTTGGTAGACGTTAGGGGTGAGCAGGGACTGTaGCAAGGGCTTCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPGPQLSCIPVYNLVDVRGEQGL*QGLPLK Trigger: CTTCAGAGGAAGCCCTTGTCACAGTCCCTGCTCACC...CCTAACGTCTACCAAGTTATACACTGGAATACAGGAGAGCTGCGGCCCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GACTGTGTGCAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGGAGCAGTCTGGGAAATaGATGGCTGGTGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCVQGAFEVGQLFSCLVKEQSGK*MAGDSL Trigger: CAGGGAGTCACCAGCCATTCATTTCCCAGACTGCTC...CTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTGCACACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| CDS-3UTR CCA 90 bp | TATGTGGACCCACAAGAACTCGGGGCATGGGAGGCACCAGGCTTCATAAGGCTGTTCTTCAGGGGATTCTaGGTCAGTTCCCGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YVDPQELGAWEAPGFIRLFFRGF*VSSRGD Trigger: GTCTCCACGGGAACTGACCCAGAATCCCCTGAAGAA...CAGCCTTATGAAGCCTGGTGCCTCCCATGCCCCGAGTTCTTGTGGGTCCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGCTCTCGGGTCGTATTaGTTGCATCAAAAACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTCHWWSTKRPVGQAEGSALGSY*LHQKPP Trigger: TGGCGGTTTTTGATGCAACCAATACGACCCGAGAGC...AGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | GGGCAGATGGCAGCTGCAAGCTACACAGCCCAGGACTGGCAGGGCTGGAAAAGGAGATCCTTAATGTTCTaGTCACTGATGAACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQMAAASYTAQDWQGWKRRSLMF*SLMNWA Trigger: GGCCCAGTTCATCAGTGACCAGAACATTAAGGATCT...CCTTTTCCAGCCCTGCCAGTCCTGGGCTGTGTAGCTTGCAGCTGCCATCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTCATGCCTTGTCCTTTCCTTCCTCAGTCCTACAGGTAGAGGCCAGCAAATGCGACTCTGGATGTaGTCAGCAACACGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: AASCLVLSFLSPTGRGQQMRLWM*SATRFT Trigger: GGTGAACCGTGTTGCTGATCACATCCAGAGTCGCAT...TTGCTGGCCTCTACCTGTAGGACTGAGGAAGGAAAGGACAAGGCATGAGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAGCTATGGAGAGGGCAGTAGAACTCTTCCAGGGGTTGCCTGGCCCCCAGCTCTCGGGTCGTATTaGTTGCATCAAAAACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSSYGEGSRTLPGVAWPPALGSY*LHQKPP Trigger: TGGCGGTTTTTGATGCAACCAATACGACCCGAGAGC...TGGGGGCCAGGCAACCCCTGGAAGAGTTCTACTGCCCTCTCCATAGCTACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTGTGTGCACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGGCCGGCAGAGGTAGATaGAGCGGGGTGTCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLVCAPRRYFLKLPCLYRAGRGR*SGVSHG Trigger: TCCATGTGACACCCCGCTCCATCTACCTCTGCCGGC...CCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | CAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCTAGCCACCCATGGTCACTGATGAACTaGGCCAGATGCTTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQRGRWARLKVLSVASHPWSLMN*ARCLEN Trigger: GTTTTCCAAGCATCTGGCCCAGTTCATCAGTGACCA...TGGGTGGCTAGCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| 3UTR CAA 72 bp | TGGACTATTCTGCCAGATTTGGGCTTTGAACGGTTCTaGGATGCAGGGCATGGCTTCCCCATGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTILPDLGFERF*DAGHGFPMAAL Trigger: CAGAGCAGCCATGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTAAGATTTGTACGTCTTaGCTATGTCCCGGCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGKICTS*LCPGDT Trigger: AGTATCGCCGGGACATAGTCAAGACGTACAAATCTT...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCCGCAGCTCTCCTGTATTCCAGTGTATAACTTGGTAGACGTTAGGGACAAGGGCTTCCTCTaGAGGCCTGGATATGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPQLSCIPVYNLVDVRDKGFL*RPGYVY Trigger: GTAGACATATCCAGGCCTTCAGAGGAAGCCCTTGTC...CCTAACGTCTACCAAGTTATACACTGGAATACAGGAGAGCTGCGGCCCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | CAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGGAAGTAGGCGAAATGAATGGCTGGTaGCTCCCTGAGAAAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGAFEVGQLFSCLVKEVGEMNGW*LPEKGA Trigger: AGCTCCTTTCTCAGGGAGTCACCAGCCATTCATTTC...GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200015.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGGCCGCAGCTCTCCTGTATTCCAGTGTATAACTTGGTAGACGTTAGGTTCTTCAGGGGATTCTaGGTCAGTTCCCGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPQLSCIPVYNLVDVRFFRGF*VSSRGD Trigger: GTCTCCACGGGAACTGACCCAGAATCCCCTGAAGAA...CCTAACGTCTACCAAGTTATACACTGGAATACAGGAGAGCTGCGGCCCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCTCTCGGGTCGTATTaGTTGCATCAAAAACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWALGSY*LHQKPP Trigger: TGGCGGTTTTTGATGCAACCAATACGACCCGAGAGC...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | GATATGATGAACGTCACTCAGACTCTGAGGGACACGGGGCAGAAGCTGCAGGGCTGGTCACTGATGAACTaGGCCAGATGCTTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DMMNVTQTLRDTGQKLQGWSLMN*ARCLEN Trigger: GTTTTCCAAGCATCTGGCCCAGTTCATCAGTGACCA...GCCCTGCAGCTTCTGCCCCGTGTCCCTCAGAGTCTGAGTGACGTTCATCATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | CATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGCTTCCTCTGAAGGCCTaGATATGTCTACATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTQPVTGGQQRGRWARLKLPLKA*ICLHSE Trigger: CTCAGAATGTAGACATATCCAGGCCTTCAGAGGAAG...CTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CAA 72 bp | GCTGGAAAAGGTGGACTATTCTGCCAGATTTGGGCTTaGAACGGTTCTTGGATGCAGGGCATGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGKGGLFCQIWA*NGSWMQGMASP Trigger: TGGGGAAGCCATGCCCTGCATCCAAGAACCGTTCAAAGCCCAAATCTGGCAGAATAGTCCACCTTTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CAA 72 bp | AGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTaGGTGGTCTTTGCCTCAAGCTGCATCCAGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSCFPGAQRKKA*VVFASSCIQPL Trigger: TAATGGCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAGGCACACTGCTTCCTaGTTTTCAGGCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVRHTAS*FSGLLH Trigger: ATGAAGAAGGCCTGAAAATCAGGAAGCAGTGTGCCT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGCCTGGATATGTCTACATTCTGAGGTCTGTCTCGGTGAGTGTTCACAGATGAACTGGGCCAGATaGTTGGAAAACTCCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKAWICLHSEVCLGECSQMNWAR*LENSRP Trigger: GGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTTCAT...CTGTGAACACTCACCGAGACAGACCTCAGAATGTAGACATATCCAGGCCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAACACAAGATGGCCTGGAGTGACCCCTCTGACAGAGGTCAGGGTCACTGGAGATCCTTAATGTTCTaGTCACTGATGAACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKHKMAWSDPSDRGQGHWRSLMF*SLMNWA Trigger: GGCCCAGTTCATCAGTGACCAGAACATTAAGGATCT...CCAGTGACCCTGACCTCTGTCAGAGGGGTCACTCCAGGCCATCTTGTGTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | CCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCCTTCCTCTGAAGGCCTaGATATGTCTACATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGHRGKRLWWSLPQAASSLPLKA*ICLHSE Trigger: CTCAGAATGTAGACATATCCAGGCCTTCAGAGGAAG...GCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAAGATTTGTACGTCTTaGCTATGTCCCGGCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVKICTS*LCPGDT Trigger: AGTATCGCCGGGACATAGTCAAGACGTACAAATCTT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGCCTGGATATGTCTACATTCTGAGGTCTGTCTCGGTGAGTGTTCACAGATGCGACTCTGGATGTaGTCAGCAACACGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKAWICLHSEVCLGECSQMRLWM*SATRFT Trigger: GGTGAACCGTGTTGCTGATCACATCCAGAGTCGCAT...CTGTGAACACTCACCGAGACAGACCTCAGAATGTAGACATATCCAGGCCTTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199591.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGCCTGGATATGTCTACATTCTGAGGTCTGTCTCGGTGAGTGTTCACAGTTCTTCAGGGGATTCTaGGTCAGTTCCCGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKAWICLHSEVCLGECSQFFRGF*VSSRGD Trigger: GTCTCCACGGGAACTGACCCAGAATCCCCTGAAGAA...CTGTGAACACTCACCGAGACAGACCTCAGAATGTAGACATATCCAGGCCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196249.5 ENSMUST00000199591.5 |
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| CDS-3UTR CCA 90 bp | GGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTAGATCCTTAATGTTCTaGTCACTGATGAACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSVPAFPGHRGKRLWWSRSLMF*SLMNWA Trigger: GGCCCAGTTCATCAGTGACCAGAACATTAAGGATCT...AGACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGCCACGTTCAGGAATATaGACTCCACTTTACAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVPRSGI*TPLYNR Trigger: ACGGTTGTAAAGTGGAGTCCATATTCCTGAACGTGG...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| 3UTR CAA 72 bp | ACACTAGAGCAACCAGTTACTGCTGTAGAAAGTTTCTaGCCCTGCTCCACAACCTGCCTATCACCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLEQPVTAVESF*PCSTTCLSPCW Trigger: CCAGCAAGGTGATAGGCAGGTTGTGGAGCAGGGCAAGAAACTTTCTACAGCAGTAACTGGTTGCTCTAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGTGTGTGCACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGAGGCACACTGCTTCCTaGTTTTCAGGCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLVCAPRRYFLKLPCLYRRHTAS*FSGLLH Trigger: ATGAAGAAGGCCTGAAAATCAGGAAGCAGTGTGCCT...CCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTGTGTGCACCAAGAAGGTACTTCCTAAAGCTGCCCTGCCTTTACAGGCCACGTTCAGGAATATaGACTCCACTTTACAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVCAPRRYFLKLPCLYRPRSGI*TPLYNR Trigger: ACGGTTGTAAAGTGGAGTCCATATTCCTGAACGTGG...CCTGTAAAGGCAGGGCAGCTTTAGGAAGTACCTTCTTGGTGCACACACCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS GCA 90 bp | AGGTCTTGCCCCGGGCACCACGCTGGCTGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSCPGHHAGWRAERA*HCCTASRSSSGDSG Trigger: CCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGCCCGGGGCAAGACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
||
| CDS GCA 90 bp | TGCCCCGGGCACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGHHAGWRAERACH*CTASRSSSGDSGSV Trigger: AACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGCCCGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
||
| CDS GCA 90 bp | GGAAGGCAAGCAGCACACCACGCTGGCTGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQAAHHAGWRAERA*HCCTASRSSSGDSG Trigger: CCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCTTGCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS-3UTR CAA 90 bp | TGCCCCCACCCTGGGCTCTTACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CPHPGLLHLWVHQFLLSRRAGLP*LYGIQI Trigger: GATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCT...CCGGGAAAGCAGGAACTGATGGACCCAGAGGTGTAAGAGCCCAGGGTGGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGTGAGTGGACTGCTCGAGTGCTGTAGCAGAGGGGCTGGCAGCAGAGCACCACCAATCCGGCCCTaGAGGTTTAGCTCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLVSGLLECCSRGAGSRAPPIRP*RFSSLS Trigger: GGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTGG...TGCTCTGCTGCCAGCCCCTCTGCTACAGCACTCGAGCAGTCCACTCACCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | AGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGAACTGGGCCAGATGCTaGGAAAACTCCCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSHTQPVTGGQQRGRWARNWARC*ENSRPR Trigger: CCGGGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTT...CCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS GCA 90 bp | CAAGCAGCACACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QAAHHAGWRAERACH*CTASRSSSGDSGSV Trigger: AACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS-3UTR CAA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGRAGLP*LYGIQI Trigger: GATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCT...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTCTGAGTGTTGCTAGCCACCCACCACCAATCCGGCCCTaGAGGTTTAGCTCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQRGRWARLKVLSVASHPPPIRP*RFSSLS Trigger: GGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTGG...TGGGTGGCTAGCAACACTCAGAACCTTCAGCCTGGCCCACCGGCCTCTTTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | GGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCAACTGGGCCAGATGCTaGGAAAACTCCCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSISSCFPGAQRKKALVVNWARC*ENSRPR Trigger: CCGGGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTT...GACCACCAAAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS GCA 90 bp | TCATGCAGACACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCRHHAGWRAERACH*CTASRSSSGDSGSV Trigger: AACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | CCGGGGCACAGAGGAAAAAGGCTTTGGTGGTCTTTGCCTCAAGCTGCATCCAGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PGHRGKRLWWSLPQAASSRAGLP*LYGIQI Trigger: GATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCT...GCTGGATGCAGCTTGAGGCAAAGACCACCAAAGCCTTTTTCCTCTGTGCCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS-3UTR CAA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAACTGGGCCAGATGCTaGGAAAACTCCCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVNWARC*ENSRPR Trigger: CCGGGGCCGGGAGTTTTCCAAGCATCTGGCCCAGTT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS GCA 90 bp | ATGAGTGTCGGACAGTTAGTCATGCAGACACCACGCTGGCTGGCGTaGAGAGCGGGCCTGCCATTGCTGTACGGCATCCAGATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSVGQLVMQTPRWLA*RAGLPLLYGIQIFF Trigger: GAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCATGACTAACTGTCCGACACTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | CAAGGGGCATTTGAGGTAGGGCAGCTCTTCAGCTGCCTTGTCAAGGAAGTAGGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QGAFEVGQLFSCLVKEVGRAGLP*LYGIQI Trigger: GATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCT...GCCTACTTCCTTGACAAGGCAGCTGAAGAGCTGCCCTACCTCAAATGCCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
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| CDS-3UTR CAA 90 bp | ACACCTCTGGGTCCATCAGTTCCTGCTTTCCCGGGGCACAGAGGAAAAAGGCTTCCACCAATCCGGCCCTaGAGGTTTAGCTCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLGPSVPAFPGHRGKRLPPIRP*RFSSLS Trigger: GGAGAGCGAGCTAAACCTCAAGGGCCGGATTGGTGG...AAGCCTTTTTCCTCTGTGCCCCGGGAAAGCAGGAACTGATGGACCCAGAGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS-3UTR CAA 90 bp | GGCAGAAGCTGCAGGGCCCATGTCCCGAAGGCAGTGGTATGGTCTTCCAGCTCCAAAGATTTGTACGTCTaGACTATGTCCCGGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: GRSCRAHVPKAVVWSSSSKDLYV*TMSRRY Trigger: GTATCGCCGGGACATAGTCAAGACGTACAAATCTTT...GGAGCTGGAAGACCATACCACTGCCTTCGGGACATGGGCCCTGCAGCTTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS-3UTR CAA 90 bp | TACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGGCCAGGCTGAAGGTTTCAGGCCTTCTTCATaGTCTGGGAGGAAAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPTCHWWSTKRPVGQAEGFRPSS*SGRKNS Trigger: TGAGTTTTTCCTCCCAGACAATGAAGAAGGCCTGAA...ACCTTCAGCCTGGCCCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAAGGCACGCCAATCCAGTaGAGGTACCGCGTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRIIHSRESRKCRQSACEGTPIQ*RYRVSF Trigger: GAAGCTGACGCGGTACCTCAACTGGATTGGCGTGCC...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS-3UTR CAA 90 bp | CCCGCCCTAGGCCCGCACAGACAGCAGTTTGGAATAATGGCACTGACTTCTCAGTTCAGGCCTTCTTCATaGTCTGGGAGGAAAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PALGPHRQQFGIMALTSQFRPSS*SGRKNS Trigger: TGAGTTTTTCCTCCCAGACAATGAAGAAGGCCTGAA...CTGAGAAGTCAGTGCCATTATTCCAAACTGCTGTCTGTGCGGGCCTAGGGCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS-3UTR CAA 90 bp | GATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGAAAGATTTGTACGTCTaGACTATGTCCCGGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: DSQQPYPTCHWWSTKRPVKDLYV*TMSRRY Trigger: GTATCGCCGGGACATAGTCAAGACGTACAAATCTTT...CACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | ATTCTCAGCAGCCATACCCAACCTGTCACTGGTGGTCAACAAAGAGGCCGGTGGTTCAGGCCTTCTTCATaGTCTGGGAGGAAAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILSSHTQPVTGGQQRGRWFRPSS*SGRKNS Trigger: TGAGTTTTTCCTCCCAGACAATGAAGAAGGCCTGAA...CCACCGGCCTCTTTGTTGACCACCAGTGACAGGTTGGGTATGGCTGCTGAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 ENSMUST00000199591.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGATAATACATTCTAGGGAAAGCAGGAAATGTAGGCAGTCCGCCTGTGAAAAAGATTTGTACGTCTaGACTATGTCCCGGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: TRIIHSRESRKCRQSACEKDLYV*TMSRRY Trigger: GTATCGCCGGGACATAGTCAAGACGTACAAATCTTT...TTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAATGTATTATCCTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051873.15 ENSMUST00000198140.5 |
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| CDS GCA 72 bp | CCCGGGCACCACGCTGGCTGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCCAGATCTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGHHAGWRAERA*HCCTASRSSSG Trigger: CCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGCCCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
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| CDS GCA 72 bp | GACTGGAAGGCAAGCAGCACACCACGCTGGCTGGCGTaGAGAGCGGGCCTGCCATTGCTGTACGGCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DWKASSTPRWLA*RAGLPLLYGIQ Trigger: CTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCTTGCCTTCCAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS GCA 72 bp | GCAGCACACCACGCTGGCTGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCCAGATCTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAHHAGWRAERA*HCCTASRSSSG Trigger: CCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS CCA 72 bp | ATGCAGACTGGAAGGCAAGCAGCACACCACGCTGGCTaGCGTGCAGAGCGGGCCTGCCATTGCTGTACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MQTGRQAAHHAG*RAERACHCCTA Trigger: TGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCTTGCCTTCCAGTCTGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS CAA 90 bp | TTGCCCCGGGCACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPRAPRWLACRAGLP*LYGIQIFFRGFWVS Trigger: ACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGCCCGGGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
||
| CDS GCA 72 bp | TGCAGACACCACGCTGGCTGGCGTGCAGAGCGGGCCTaGCATTGCTGTACGGCATCCAGATCTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRHHAGWRAERA*HCCTASRSSSG Trigger: CCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS GCA 72 bp | GGACAGTTAGTCATGCAGACACCACGCTGGCTGGCGTaGAGAGCGGGCCTGCCATTGCTGTACGGCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GQLVMQTPRWLA*RAGLPLLYGIQ Trigger: CTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCATGACTAACTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS CAA 72 bp | GCACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATCTTCTTCAGGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: APRWLACRAGLP*LYGIQIFFRGF Trigger: GAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051873.15 |
||
| CDS CAA 90 bp | GCAAGCAGCACACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSTPRWLACRAGLP*LYGIQIFFRGFWVS Trigger: ACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTGCTGCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196249.5 |
||
| CDS GCA 72 bp | CACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATTaGTGTACGGCATCCAGATCTTCTTCAGGGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: HHAGWRAERACH*CTASRSSSGDS Trigger: AGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051873.15 ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS CAA 72 bp | ACACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATCTTCTTCAGGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: TPRWLACRAGLP*LYGIQIFFRGF Trigger: GAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000196249.5 ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS CAA 90 bp | GTCATGCAGACACCACGCTGGCTGGCGTGCAGAGCGGGCCTGCCATaGCTGTACGGCATCCAGATCTTCTTCAGGGGATTCTGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VMQTPRWLACRAGLP*LYGIQIFFRGFWVS Trigger: ACTGACCCAGAATCCCCTGAAGAAGATCTGGATGCCGTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
||
| CDS CCA 72 bp | ATGAGTGTCGGACAGTTAGTCATGCAGACACCACGCTaGCTGGCGTGCAGAGCGGGCCTGCCATTGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: MSVGQLVMQTPR*LACRAGLPLLY Trigger: GTACAGCAATGGCAGGCCCGCTCTGCACGCCAGCCAGCGTGGTGTCTGCATGACTAACTGTCCGACACTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198140.5 ENSMUST00000199591.5 |
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