Pregenerated sensors for PFKFB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026409Ensembl transcript IDs: ENSMUST00000050406.11, ENSMUST00000066863.13, ENSMUST00000169659.8, ENSMUST00000171479.8, ENSMUST00000185233.7, ENSMUST00000186777.2, ENSMUST00000186867.7, ENSMUST00000187089.7, ENSMUST00000189167.7, ENSMUST00000189534.7, ENSMUST00000191301.2, ENSMUST00000191347.7
Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCCCCGCCTAGCCTTCATTCCCAACCCCTCAGTCAGGAGGCACTaGATCAGTCCTGTCCAGTGCGTGAGGTACAAGCCTCCGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: WPRLAFIPNPSVRRH*ISPVQCVRYKPPRE Trigger: TTCTCTCGGAGGCTTGTACCTCACGCACTGGACAGGACTGATTCAGTGCCTCCTGACTGAGGGGTTGGGAATGAAGGCTAGGCGGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| 3UTR TCA 90 bp | GAGGCCAAAGCTGGAGGGAAACACACAGTTACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: EAKAGGKHTVTPPEC*LGSSAGPPLLACPE Trigger: CTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGCTTTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR CCA 90 bp | CAAAGCTGGAGGGAAACACACAGTTACACCACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCCAGAGCACGG | + |
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Preference number: 1 (lower is better) Translates to: QSWRETHSYTTGMLT*VFGWSAPSCMSRAR Trigger: CCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR TCA 90 bp | GGGGTTTACTTGACCACACAGACTGCCAAGAGCAAACCCTGGAGGTaGCCTGCATCTGCTGACTATACTGGCGATGCCCCCTGGATCCTC | + |
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Preference number: 1 (lower is better) Translates to: GVYLTTQTAKSKPWR*PASADYTGDAPWIL Trigger: GAGGATCCAGGGGGCATCGCCAGTATAGTCAGCAGATGCAGGTCACCTCCAGGGTTTGCTCTTGGCAGTCTGTGTGGTCAAGTAAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR GCA 90 bp | CCATCGAGGTCAAACAATGCTCCTGGGCATAACTGCTCTTCCTTCTaGTCCCCTGCACACAGGAAGAGCAGGCCATTGTCTGGGCCCCTA | + |
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Preference number: 1 (lower is better) Translates to: PSRSNNAPGHNCSSF*SPAHRKSRPLSGPL Trigger: TAGGGGCCCAGACAATGGCCTGCTCTTCCTGTGTGCAGGGGAGCAGAAGGAAGAGCAGTTATGCCCAGGAGCATTGTTTGACCTCGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CCA 90 bp | TGTCCATTTGCAAACTCCAGGGCTTTCTGTGGATGTTCTGTAGCCTaGGCTGACCCTTGCTGGACCTGGCTGGAGAGGAAGGGAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CPFANSRAFCGCSVA*ADPCWTWLERKGEG Trigger: CCCTTCTCCCTTCCTCTCCAGCCAGGTCCAGCAAGGGTCAGCCCAGGCTACAGAACATCCACAGAAAGCCCTGGAGTTTGCAAATGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| 3UTR GCA 90 bp | CCCAAACCTTACCCATCGAGGTCAAACAATGCTCCTGGGCATAACTaGTCTTCCTTCTGCTCCCCTGCACACAGGAAGAGCAGGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: PKPYPSRSNNAPGHN*SSFCSPAHRKSRPL Trigger: CAATGGCCTGCTCTTCCTGTGTGCAGGGGAGCAGAAGGAAGAGCAGTTATGCCCAGGAGCATTGTTTGACCTCGATGGGTAAGGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CCA 90 bp | AGGGCTGAGGGGCTTGAGGGGTCGGCTCCCAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGAACTGGACAGAGGCGTAAAGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: RAEGLEGSAPNTVIS*TPYCVRTGQRRKAV Trigger: AACAGCTTTACGCCTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAAATTACAGTGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR TCA 90 bp | CCAACCCCTCAGTCAGGAGGCACTGAATCAGTCCTGTCCAGTGCGTaGGGTACAAGCCTCCGAGAGAAAACAGTAGCTATAAGAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: PTPQSGGTESVLSSA*GTSLREKTVAIREC Trigger: ACATTCTCTTATAGCTACTGTTTTCTCTCGGAGGCTTGTACCTCACGCACTGGACAGGACTGATTCAGTGCCTCCTGACTGAGGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| 3UTR TCA 90 bp | CTTGGGGAAGTTGTGCTGATTGGAAATGGAGGGACACCACATACGTaGAAGCCACACCCAAACCTTACCCATCGAGGTCAAACAATGCTC | + |
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Preference number: 1 (lower is better) Translates to: LGEVVLIGNGGTPHT*KPHPNLTHRGQTML Trigger: GAGCATTGTTTGACCTCGATGGGTAAGGTTTGGGTGTGGCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR TCA 90 bp | TTCCTTCTCATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGCTaGTTGGAAATGGAGGGACACCACATACGTGAAAGCCACACCCAA | + |
|
Preference number: 1 (lower is better) Translates to: FLLILTGVWLLGKLC*LEMEGHHIRESHTQ Trigger: TTGGGTGTGGCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CCA 90 bp | TTCTCATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGCTGATTaGAAATGGAGGGACACCACATACGTGAAAGCCACACCCAAACCT | + |
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Preference number: 1 (lower is better) Translates to: FSSLQGFGSWGSCAD*KWRDTTYVKATPKP Trigger: AGGTTTGGGTGTGGCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR GCA 90 bp | AGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTaGACACAGCACCAATGGGGCTTAGATACTTATCAACAGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: RREGKRLSQCRSIPE*TQHQWGLDTYQQSL Trigger: AAGGGACTGTTGATAAGTATCTAAGCCCCATTGGTGCTGTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| 3UTR TCA 90 bp | CAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCTCTAGATaGAAAGGGAGCCACGGATACAATTCTCCTGCCACCAGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QTLHQRAWNNKNLSR*KGSHGYNSPATREE Trigger: CTCTTCTCTGGTGGCAGGAGAATTGTATCCGTGGCTCCCTTTTCATCTAGAGAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| 3UTR GCA 90 bp | ACTGGGTCAGACATCAGGAAACAGAAGAACCAAGTCTATGACTCATaGTTGGCTCCTCTTCTTTCAGATCATCCCATCTGGGGACATGTC | + |
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Preference number: 1 (lower is better) Translates to: TGSDIRKQKNQVYDS*LAPLLSDHPIWGHV Trigger: GACATGTCCCCAGATGGGATGATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGATGTCTGACCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| 3UTR CCA 90 bp | CCTTCTCATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGAGTTaGCTTGTCACGATGTGTGTCTACAGCATCCACATTCAGAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: PSHPYRGLALGEVVS*LVTMCVYSIHIQSN Trigger: ATTACTCTGAATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
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| 3UTR GCA 90 bp | AATCTGCCCACTCTCTTCAGTAAAATAGGCTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTTGCGGATCTTCATAGCCTCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: NLPTLFSKIGFNIFQ*HQSTLFADLHSLFI Trigger: AATGAAGAGGCTATGAAGATCCGCAAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAAGCCTATTTTACTGAAGAGAGTGGGCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR TCA 90 bp | TCAGGTAGTAGACAATCTTACTCTGGATGTAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTACATTTATCACCAGAATATTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SGSRQSYSGCSPELC*PGISGLHLSPEYWQ Trigger: CTGCCAATATTCTGGTGATAAATGTAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACTACATCCAGAGTAAGATTGTCTACTACCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR GCA 90 bp | ACACACACATACATACATACACACACACACATACATACACACACATaGATACATACACACACATACACACACACAGACTTCACAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: THTYIHTHTHIHTHT*IHTHTYTHTDFTDW Trigger: CCAGTCTGTGAAGTCTGTGTGTGTGTATGTGTGTGTATGTATGCATGTGTGTGTATGTATGTGTGTGTGTGTATGTATGTATGTGTGTGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| 3UTR GCA 90 bp | TTCATTGTCATGTCGAAAGAAATCATAAGACTGATAGGACTTGACTaGTTCACGTCGATATACCCCAAGATTAAACACTTTGGTGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: FIVMSKEIIRLIGLD*FTSIYPKIKHFGGY Trigger: GTACCCACCAAAGTGTTTAATCTTGGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAGTCTTATGATTTCTTTCGACATGACAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CAA 90 bp | CCAAAGCTGGAGGGAAACACACAGTTACACCACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCCAGAGCACG | + |
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Preference number: 2 (lower is better) Translates to: PKLEGNTQLHHRNAD*GLRLVRPFLHVQST Trigger: CGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAACACACAGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTGGTCCGCAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: GNTQLHHRNADLGLRLVRNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCCTCCAGGGCTTTCTGTaGATGTTCTGTAGCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLLQGFL*MFCSLG Trigger: GCCCAGGCTACAGAACATCCACAGAAAGCCCTGGAG...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | AATGCTGACTTGGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCCAGAGCACGTTGACCAGGAATCTCTaGCCTACATTTATCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: NADLGLRLVRPFLHVQSTLTRNL*PTFITR Trigger: TCTGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...CGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CAA 90 bp | ACTGGACAGAGGCGTAAAGCTGTTCCTTCTCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTGCTGATTGGAAATGGAGGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: TGQRRKAVPSHPYRG*ALGEVVLIGNGGTP Trigger: TGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAACAGCTTTACGCCTCTGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CAA 90 bp | ACTGGACAGAGGCGTAAAGCTGTTCCTTCTCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTGAGTTGGCTTGTCACGATGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: TGQRRKAVPSHPYRG*ALGEVVSWLVTMCV Trigger: GACACACATCGTGACAAGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAACAGCTTTACGCCTCTGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCCAACAACAATCTGATTCTTCTGAAAGAGACACCCACTCACTGATGCCCGACCCTTGCTGGACCTaGCTGGAGAGGAAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: VFQQQSDSSERDTHSLMPDPCWT*LERKGE Trigger: TTCTCCCTTCCTCTCCAGCCAGGTCCAGCAAGGGTC...GGGCATCAGTGAGTGGGTGTCTCTTTCAGAAGAATCAGATTGTTGTTGGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTACCGTTGCTCAATCTCTGAATATGTCATCTCCTCACACACGCCAGCATCTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
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Preference number: 2 (lower is better) Translates to: LGTVAQSLNMSSPHTRQHLLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...ATGCTGGCGTGTGTGAGGAGATGACATATTCAGAGATTGAGCAACGGTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTCAGATCATCCCATCTaGGGACATGTCCTAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: PDTLHLPGDLSHFPHCKRSDHPI*GHVLKT Trigger: GGTCTTTAGGACATGTCCCCAGATGGGATGATCTGA...CCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTGCACACACAGACTTCACAGACTaGGTCAGACATCAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: GEGKGKDSPSVDPFPSAHTDFTD*VRHQET Trigger: TGTTTCCTGATGTCTGACCCAGTCTGTGAAGTCTGT...GTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGTCACGGAACCGCCAGCAGTTCATCACATCCTACTTAGGTAACAGTCTGTTCCCTATGTCCATTTaGAAACTCCAGGGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: WESRNRQQFITSYLGNSLFPMSI*KLQGFL Trigger: CAGAAAGCCCTGGAGTTTGCAAATGGACATAGGGAA...CAGACTGTTACCTAAGTAGGATGTGATGAACTGCTGGCGGTTCCGTGACTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR CAA 90 bp | TGCTTGGCAAAGTTCAAAATCATGTCCCTCCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCAATCTGCCCACTCTCTTCAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: CLAKFKIMSLLSRVV*VASNTAICPLSSVK Trigger: TTTTACTGAAGAGAGTGGGCAGATTGCGGTGTTTGATGCCACCAATACCACTCGGGAGAGGAGGGACATGATTTTGAACTTTGCCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCCAGTGCCACCAGAGCACACTGTTTGCGGATCTTCATAGCCTCTTCATTCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
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Preference number: 2 (lower is better) Translates to: IFQCHQSTLFADLHSLFILIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...AATGAAGAGGCTATGAAGATCCGCAAACAGTGTGCTCTGGTGGCACTGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCACAGACTTCACAGACTaGGTCAGACATCAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLTDFTD*VRHQET Trigger: TGTTTCCTGATGTCTGACCCAGTCTGTGAAGTCTGT...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGTTACAGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGGTTTACACTAGAGAATaGCTGAGGCTGCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PAVTATAFQRSHQLDRHKVYTRE*LRLLCT Trigger: TGTGCAGAGCAGCCTCAGCCATTCTCTAGTGTAAAC...CTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCTGTAACTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGTAAGTTTGAAGATGATGTGCAGGGGGCACCTCAAGTATGGTAACTCATCTGTTTACACTAGAGAATaGCTGAGGCTGCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: GVSLKMMCRGHLKYGNSSVYTRE*LRLLCT Trigger: TGTGCAGAGCAGCCTCAGCCATTCTCTAGTGTAAAC...AGATGAGTTACCATACTTGAGGTGCCCCCTGCACATCATCTTCAAACTTACTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| 3UTR CAA 90 bp | TCCACATTCTTAGAGCCAGCTCTCCAGGGCAGCAAAAACTTAGGATaGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: STFLEPALQGSKNLG*FLMKRGKSSHPMSI Trigger: AATGGACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGCTCTAAGAATGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTGTTTACACTAGAGAATaGCTGAGGCTGCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PVSFSTLQEVTTSIHIALVYTRE*LRLLCT Trigger: TGTGCAGAGCAGCCTCAGCCATTCTCTAGTGTAAAC...AAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGAGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCTCTCCAGGGCAGCAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAACAGACTTCACAGACTaGGTCAGACATCAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: ASSPGQQKLRIVSHEKRQTDFTD*VRHQET Trigger: TGTTTCCTGATGTCTGACCCAGTCTGTGAAGTCTGT...TTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCCTAGGCAGAGGAAGGAGCCTCTCCAGGTGACATGCATACATAGAAAGTGGTATTTGCAAACTTaGTTCAAAAGAGACAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ACPRQRKEPLQVTCIHRKWYLQT*FKRDKN Trigger: GTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCA...CTTTCTATGTATGCATGTCACCTGGAGAGGCTCCTTCCTCTGCCTAGGACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCACACATTAGGCAGTCTATGACTCATGCTTaGCTCCTCTTCTTTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: ARPHLETNSETVCSHIRQSMTHA*LLFFQI Trigger: GATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGA...CTGCCTAATGTGTGAACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR CCA 90 bp | GAGACCTTCACTTTTGCCTGGAGAAACTCAGGGCTCAATGGTGCTTTTAAACAGTCTATGACTCATGCTTaGCTCCTCTTCTTTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: ETFTFAWRNSGLNGAFKQSMTHA*LLFFQI Trigger: GATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGA...CTGTTTAAAAGCACCATTGAGCCCTGAGTTTCTCCAGGCAAAAGTGAAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCAGTGAGGGATGCCATTaGGGGGTGTCTATGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: IKIPSDHQKGVYFNAKASSEGCH*GVSMLS Trigger: GCTGAGCATAGACACCCCTCAATGGCATCCCTCACT...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| 3UTR-3UTR GCA 90 bp | GATTTGTTTTTGGTACACAAAAGAAACCCAAGCCTCTTGATCCCAAAGATTCCACTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 2 (lower is better) Translates to: DLFLVHKRNPSLLIPKIPLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...TGGAATCTTTGGGATCAAGAGGCTTGGGTTTCTTTTGTGTACCAAAAACAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCCTCTTGGAAATAAAGAGACATACAGGACATGAACTCTGGATTTGTTTTCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: LCLLEIKRHTGHELWICFPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...AAAACAAATCCAGAGTTCATGTCCTGTATGTCTCTTTATTTCCAAGAGGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACTGGAATGGCAAAGAAAATGAGAGCCATAGGACAAAAATTCTGAACTGTCACCCTATGTCCATTTaGAAACTCCAGGGCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SYWNGKENESHRTKILNCHPMSI*KLQGFL Trigger: CAGAAAGCCCTGGAGTTTGCAAATGGACATAGGGTG...ACAGTTCAGAATTTTTGTCCTATGGCTCTCATTTTCTTTGCCATTCCAGTAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGCCTCTTGGAAATAAAGAGACATACAGGACATGAACTCTGGATTTGTTTTGAAACCCAAGCCTCTTaGTCCCAAAGATTCCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LCLLEIKRHTGHELWICFETQAS*SQRFQD Trigger: ATCTTGGAATCTTTGGGATCAAGAGGCTTGGGTTTC...AAAACAAATCCAGAGTTCATGTCCTGTATGTCTCTTTATTTCCAAGAGGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CCA 90 bp | GATATAAGGATAGACTTAAAGGACACATGTGAAGGACAATTAGGTTGTTACATCTCAGATCATCCCATCTaGGGACATGTCCTAAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: DIRIDLKDTCEGQLGCYISDHPI*GHVLKT Trigger: GGTCTTTAGGACATGTCCCCAGATGGGATGATCTGA...GATGTAACAACCTAATTGTCCTTCACATGTGTCCTTTAAGTCTATCCTTATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR GCA 72 bp | ATGCTGACTTGGGTCTTCGGCTGGTCCGCCCCTTCTTaGATGTCCAGAGCACGGAGAGGGCTGAGGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MLTWVFGWSAPS*MSRARRGLRGL Trigger: CAAGCCCCTCAGCCCTCTCCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTCAGCCTGCTCTCCTCCATCAGCTGAGAAGAGCGGCTTCCGGTGAGCAGACCCAACTTGCCATCTaGCCCCCGGGTGACGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALQPALLHQLRRAASGEQTQLAI*PPGDVF Trigger: AAACACGTCACCCGGGGGCAAGATGGCAAGTTGGGT...CTGCTCACCGGAAGCCGCTCTTCTCAGCTGATGGAGGAGAGCAGGCTGAAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCTCCCCTGCACACAGGAAGAGCAGGCCATTGTCTGGGCCCCTAGCCCCGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPCTQEEQAIVWAPSPATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...GGGGCTAGGGGCCCAGACAATGGCCTGCTCTTCCTGTGTGCAGGGGAGCAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACACACAGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTGGTCCGCACCCAACTTGCCATCTaGCCCCCGGGTGACGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GNTQLHHRNADLGLRLVRTQLAI*PPGDVF Trigger: AAACACGTCACCCGGGGGCAAGATGGCAAGTTGGGT...GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR TCA 72 bp | GCTGGAGGGAAACACACAGTTACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGTCCGCCCCTTCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AGGKHTVTPPEC*LGSSAGPPLLA Trigger: TGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR CCA 72 bp | AGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATGTCCAGAGCACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYTTGMLTWVFG*SAPSCMSRARR Trigger: TCTCCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCTCCCCTGCACACAGGAAGAGCAGGCCATTGTCTGGGCCCCTAGCCCCAGAAACCCAAGCCTCTaGATCCCAAAGATTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLPCTQEEQAIVWAPSPRNPSL*IPKIPR Trigger: TCTTGGAATCTTTGGGATCAAGAGGCTTGGGTTTCT...GGGGCTAGGGGCCCAGACAATGGCCTGCTCTTCCTGTGTGCAGGGGAGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | TTGACCACACAGACTGCCAAGAGCAAACCCTGGAGGTaGCCTGCATCTGCTGACTATACTGGCGATGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTTQTAKSKPWR*PASADYTGDAP Trigger: GGGGGCATCGCCAGTATAGTCAGCAGATGCAGGTCACCTCCAGGGTTTGCTCTTGGCAGTCTGTGTGGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | AGGGAAACACACAGTTACACCACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RETHSYTTGMLT*VFGWSAPSCMS Trigger: GGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR TCA 72 bp | CTAGCCTTCATTCCCAACCCCTCAGTCAGGAGGCACTaGATCAGTCCTGTCCAGTGCGTGAGGTACAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAFIPNPSVRRH*ISPVQCVRYKP Trigger: AGGCTTGTACCTCACGCACTGGACAGGACTGATTCAGTGCCTCCTGACTGAGGGGTTGGGAATGAAGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR TCA 72 bp | TGCCAAGAGCAAACCCTGGAGGTGACCTGCATCTGCTaGCTATACTGGCGATGCCCCCTGGATCCTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CQEQTLEVTCIC*LYWRCPLDPLL Trigger: CAAAAGAGGATCCAGGGGGCATCGCCAGTATAGTCAGCAGATGCAGGTCACCTCCAGGGTTTGCTCTTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR GCA 72 bp | GGGAGCCAACAAAGGGGTTTACTTGACCACACAGACTaGCAAGAGCAAACCCTGGAGGTGACCTGCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSQQRGLLDHTD*QEQTLEVTCIC Trigger: GCAGATGCAGGTCACCTCCAGGGTTTGCTCTTGGCAGTCTGTGTGGTCAAGTAAACCCCTTTGTTGGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | TTCATATTGCACTTCAGCCTGCTCTCCTCCATCAGCTaGGAAGAGCGGCTTCCGGTGAGCAGAAGAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FILHFSLLSSIS*EERLPVSRRGF Trigger: GAACCCTCTTCTGCTCACCGGAAGCCGCTCTTCTCAGCTGATGGAGGAGAGCAGGCTGAAGTGCAATATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR TCA 72 bp | ACGCCTGTCCTAGGCAGAGGAAGGAGCCTCTCCAGGTaGCATGCATACATAGAAAGTAAGCTGCAACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPVLGRGRSLSR*HAYIESKLQPG Trigger: CCCAGGTTGCAGCTTACTTTCTATGTATGCATGTCACCTGGAGAGGCTCCTTCCTCTGCCTAGGACAGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| 3UTR GCA 72 bp | TACCCATCGAGGTCAAACAATGCTCCTGGGCATAACTaGTCTTCCTTCTGCTCCCCTGCACACAGGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YPSRSNNAPGHN*SSFCSPAHRKS Trigger: GCTCTTCCTGTGTGCAGGGGAGCAGAAGGAAGAGCAGTTATGCCCAGGAGCATTGTTTGACCTCGATGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | GGGCTTGAGGGGTCGGCTCCCAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGAACTGGACAGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GLEGSAPNTVIS*TPYCVRTGQRR Trigger: ACGCCTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAAATTACAGTGTTGGGAGCCGACCCCTCAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR TCA 72 bp | AGCCTCACATCAGGAGAGCAAAGTGAGGGATGCCATTaGGGGGTGTCTATGCTCAGCCAGCAAATTCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLTSGEQSEGCH*GVSMLSQQILH Trigger: GTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCTCACTTTGCTCTCCTGATGTGAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000189167.7 |
||
| 3UTR GCA 72 bp | TCAAACAATGCTCCTGGGCATAACTGCTCTTCCTTCTaGTCCCCTGCACACAGGAAGAGCAGGCCATTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SNNAPGHNCSSF*SPAHRKSRPLS Trigger: AGACAATGGCCTGCTCTTCCTGTGTGCAGGGGAGCAGAAGGAAGAGCAGTTATGCCCAGGAGCATTGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGTTCCCTGAAGCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTACCCAACTTGCCATCTaGCCCCCGGGTGACGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGFPEARPHLETNSETVCTQLAI*PPGDVF Trigger: AAACACGTCACCCGGGGGCAAGATGGCAAGTTGGGT...ACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGCTTCAGGGAACCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTACCGTTGCTCAATCTCTGAATATGTCATCTCCTCACACACGCCAGCATATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LGTVAQSLNMSSPHTRQHIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...ATGCTGGCGTGTGTGAGGAGATGACATATTCAGAGATTGAGCAACGGTACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR TCA 72 bp | CAGTCAGGAGGCACTGAATCAGTCCTGTCCAGTGCGTaGGGTACAAGCCTCCGAGAGAAAACAGTAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: QSGGTESVLSSA*GTSLREKTVAI Trigger: TATAGCTACTGTTTTCTCTCGGAGGCTTGTACCTCACGCACTGGACAGGACTGATTCAGTGCCTCCTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR TCA 72 bp | AAGGTTTGTCACAGGGGAAGACCCTGGCCATCACGTTaGAGAGCAGTAAGGGAGCCAACAAAGGGGTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: KVCHRGRPWPSR*RAVREPTKGFT Trigger: AGTAAACCCCTTTGTTGGCTCCCTTACTGCTCTTCAACGTGATGGCCAGGGTCTTCCCCTGTGACAAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR GCA 72 bp | GAGAGCAAAGTGAGGGATGCCATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCCACTTCCCTATGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESKVRDAIEGCL*SASKFSTSLCP Trigger: TGGACATAGGGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCTCACTTTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| 3UTR GCA 72 bp | GAGAGCAAAGTGAGGGATGCCATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCCACTTCAGTTGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ESKVRDAIEGCL*SASKFSTSVGL Trigger: CAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCTCACTTTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
||
| 3UTR CCA 72 bp | TCAAAATCATGTCCCTCCTCTCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCTGCCCACTCTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKSCPSSPEWYW*HQTPQSAHSLQ Trigger: CTGAAGAGAGTGGGCAGATTGCGGTGTTTGATGCCACCAATACCACTCGGGAGAGGAGGGACATGATTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | AGCTGTTCCTTCTCATCCTTACAGGGGTTTGGCTCTTaGGGAAGTTGTGCTGATTGGAAATGGAGGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: SCSFSSLQGFGS*GSCADWKWRDT Trigger: GGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | CCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTaGCCACTAGCATTCATATTGCACTTCAGCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGDLSHFPHCKR*PLAFILHFSLL Trigger: GAGCAGGCTGAAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR TCA 72 bp | GTTGTGCTGATTGGAAATGGAGGGACACCACATACGTaGAAGCCACACCCAAACCTTACCCATCGAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VVLIGNGGTPHT*KPHPNLTHRGQ Trigger: TTGACCTCGATGGGTAAGGTTTGGGTGTGGCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | ATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGCTaGTTGGAAATGGAGGGACACCACATACGTGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILTGVWLLGKLC*LEMEGHHIRES Trigger: GCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | AGTTCAAAATCATGTCCCTCCTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAATCTGCCCACTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSKSCPSSPEWY*WHQTPQSAHSL Trigger: AAGAGAGTGGGCAGATTGCGGTGTTTGATGCCACCAATACCACTCGGGAGAGGAGGGACATGATTTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | GTCCTCTTCAACTGGCTCGTCCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGAAACTTCTTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLFNWLVHTLRS*ISCSSRNFFRA Trigger: TGCTCTGAAGAAGTTTCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTGGACGAGCCAGTTGAAGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| 3UTR CCA 72 bp | TTACAGGGGTTTGGCTCTTGGGGAAGTTGTGCTGATTaGAAATGGAGGGACACCACATACGTGAAAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LQGFGSWGSCAD*KWRDTTYVKAT Trigger: TGTGGCTTTCACGTATGTGGTGTCCCTCCATTTCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR CCA 72 bp | CCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGAGTTaGCTTGTCACGATGTGTGTCTACAGCATCCACATT | + |
|
Preference number: 3 (lower is better) Translates to: PYRGLALGEVVS*LVTMCVYSIHI Trigger: AATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
||
| 3UTR CCA 72 bp | AGCTGTTCCTTCTCATCCTTACAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCTTGTCACGATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCSFSSLQGFGS*GSCELACHDVC Trigger: ACACACATCGTGACAAGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACACACAGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTGGTCCGCTTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GNTQLHHRNADLGLRLVRFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACTCTGTTGACCAGGAATCTCTGGCCTACATTTATCACCAGAATATTGGCCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNSVDQESLAYIYHQNIGLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...GCCAATATTCTGGTGATAAATGTAGGCCAGAGATTCCTGGTCAACAGAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | AACAATCTGATTCTTCTGAAAGAGACACCCACTCACTaGTGCCCCAAGGCTATGCTGCATCTACCACGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NNLILLKETPTH*CPKAMLHLPRV Trigger: GACACGTGGTAGATGCAGCATAGCCTTGGGGCATCAGTGAGTGGGTGTCTCTTTCAGAAGAATCAGATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| 3UTR GCA 72 bp | GGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTaGACACAGCACCAATGGGGCTTAGATACTTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GKRLSQCRSIPE*TQHQWGLDTYQ Trigger: TTGATAAGTATCTAAGCCCCATTGGTGCTGTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCTTCCAGGCCTCATTTTaGGTAGCCTCAAATGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLFQASF*VASNEK Trigger: CTTCTCATTTGAGGCTACCAAAAATGAGGCCTGGAA...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR TCA 72 bp | CACCAAAGAGCATGGAACAACAAAAACCTCTCTAGATaGAAAGGGAGCCACGGATACAATTCTCCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: HQRAWNNKNLSR*KGSHGYNSPAT Trigger: GGTGGCAGGAGAATTGTATCCGTGGCTCCCTTTTCATCTAGAGAGGTTTTTGTTGTTCCATGCTCTTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| 3UTR CCA 72 bp | TCAGGAAACAGAAGAACCAAGTCTATGACTCATGCTTaGCTCCTCTTCTTTCAGATCATCCCATCTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGNRRTKSMTHA*LLFFQIIPSGD Trigger: GTCCCCAGATGGGATGATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTTCTCATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTGCTGATTGGATTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 3 (lower is better) Translates to: VPSHPYRGLALGEVVLIGLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...TCCAATCAGCACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | TGGGTCAGACATCAGGAAACAGAAGAACCAAGTCTATaGCTCATGCTTGGCTCCTCTTCTTTCAGATCATCC | + |
|
Preference number: 3 (lower is better) Translates to: WVRHQETEEPSL*LMLGSSSFRSS Trigger: GGATGATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGATGTCTGACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR CCA 72 bp | AACAGCCCCAAAGGTCACGGGCTACAGGAAAGTTACTaGAATGGCAAAGAAAATGAGAGCCATAGGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSPKGHGLQESY*NGKENESHRTK Trigger: TTTTGTCCTATGGCTCTCATTTTCTTTGCCATTCCAGTAACTTTCCTGTAGCCCGTGACCTTTGGGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| 3UTR GCA 72 bp | ACTCTCTTCAGTAAAATAGGCTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTTGCGGATCTTCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLFSKIGFNIFQ*HQSTLFADLHS Trigger: GCTATGAAGATCCGCAAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAAGCCTATTTTACTGAAGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR TCA 72 bp | AGACAATCTTACTCTGGATGTAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTACATTTATCACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RQSYSGCSPELC*PGISGLHLSPE Trigger: TTCTGGTGATAAATGTAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACTACATCCAGAGTAAGATTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCCCACTAGCATTCATATaGCACTTCAGCCTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IKIPSDHQKGVYFNAKASPLAFI*HFSLLS Trigger: GGAGAGCAGGCTGAAGTGCAATATGAATGCTAGTGG...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| 3UTR TCA 72 bp | GTTCAAAAGAGACAAGAACTAACTTGTTCAGGCTGTTaGAGACTTTCTGAGGCACAGTGTAGTACTATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VQKRQELTCSGC*RLSEAQCSTIP Trigger: AGGAATAGTACTACACTGTGCCTCAGAAAGTCTTCAACAGCCTGAACAAGTTAGTTCTTGTCTCTTTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| 3UTR CCA 72 bp | ATTCATAGTCACAGTGTGTATGCATCAGACACTCAGTaGTCTTCCAACAACAATCTGATTCTTCTGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IHSHSVYASDTQ*SSNNNLILLKE Trigger: CTCTTTCAGAAGAATCAGATTGTTGTTGGAAGACCACTGAGTGTCTGATGCATACACACTGTGACTATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| 3UTR CCA 72 bp | CTCTTGGAAATAAAGAGACATACAGGACATGAACTCTaGATTTGTTTTTGGTACACAAAAGAAACCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLEIKRHTGHEL*ICFWYTKETQA Trigger: GGCTTGGGTTTCTTTTGTGTACCAAAAACAAATCCAGAGTTCATGTCCTGTATGTCTCTTTATTTCCAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| 3UTR GCA 72 bp | ATGTCGAAAGAAATCATAAGACTGATAGGACTTGACTaGTTCACGTCGATATACCCCAAGATTAAACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: MSKEIIRLIGLD*FTSIYPKIKHF Trigger: AAAGTGTTTAATCTTGGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAGTCTTATGATTTCTTTCGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| CDS-3UTR CCA 90 bp | CCCATTTCACAGCCGGCAAAGGACTGTCGGGCTCCTCAAGTTCGGAACGCAAACACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PISQPAKDCRAPQVRNANTWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGT...GTTTGCGTTCCGAACTTGAGGAGCCCGACAGTCCTTTGCCGGCTGTGAAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCGACCCTTGCTGGACTTaGGTCTTCGGCTGGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLDPCWT*VFGWSA Trigger: GGCGGACCAGCCGAAGACCCAAGTCCAGCAAGGGTC...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
||
| 3UTR CAA 72 bp | GAGGGAAACACACAGTTACACCACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGNTQLHHRNAD*GLRLVRPFLHV Trigger: GACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGCTAGAGATGGCCCCGCCTAGCCTTCATTCCCAACCCCTCAGTCAGGAGTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YGLEMAPPSLHSQPLSQESPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...CTCCTGACTGAGGGGTTGGGAATGAAGGCTAGGCGGGGCCATCTCTAGCCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTGCACACACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKGKDSPSVDPFPSAHTWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGT...GTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | CCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTLHLPGDLSHFPHCKRTGMLT*VFGWSA Trigger: GGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGT...CCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCTCTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CWHPKLFSSSSSSERSGLSWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGA...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
||
| CDS-3UTR CCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCGGATGTTCTGTAGCCTaGGCTGACCCTTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASAGCSVA*ADPCWT Trigger: AGTCCAGCAAGGGTCAGCCCAGGCTACAGAACATCC...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCAGTGAGGGATGCCATTaGGGGGTGTCTATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLSEGCH*GVSMLS Trigger: GCTGAGCATAGACACCCCTCAATGGCATCCCTCACT...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000171479.8 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACAAGTGAGGGATGCCATTaGGGGGTGTCTATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTSEGCH*GVSMLS Trigger: GCTGAGCATAGACACCCCTCAATGGCATCCCTCACT...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000171479.8 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCCTCCAGGGCTTTCTGTaGATGTTCTGTAGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLLQGFL*MFCSLG Trigger: GCCCAGGCTACAGAACATCCACAGAAAGCCCTGGAG...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCATTCCCAACCCCTCAGTCAGGAGGCACTGAATCAGTCCTGTCCAGTGAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLHSQPLSQEALNQSCPVSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...CACTGGACAGGACTGATTCAGTGCCTCCTGACTGAGGGGTTGGGAATGAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASASPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | TCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCCTTAGTGAGGGATGCCATTaGGGGGTGTCTATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKKPPLFPYGLEMAPPSLSEGCH*GVSMLS Trigger: GCTGAGCATAGACACCCCTCAATGGCATCCCTCACT...AAGGCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASALLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASAPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCCAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACACAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLTWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGT...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTHELRFCFQINVGTGVTGMLT*VFGWSA Trigger: GGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGT...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR CAA 72 bp | ATCTGGGGACATGTCCTAAAGACCCAACTTGCCATCTaGCCCCCGGGTGACGTGTTTACACTAGAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWGHVLKTQLAI*PPGDVFTLENG Trigger: GCCATTCTCTAGTGTAAACACGTCACCCGGGGGCAAGATGGCAAGTTGGGTCTTTAGGACATGTCCCCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: WHPKLFSSSSSSERSGLSSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | CCCATTTCACAGCCGGCAAAGGACTGTCGGGCTCCTCAAGTTCGGAACGCAAACCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PISQPAKDCRAPQVRNANPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...GTTTGCGTTCCGAACTTGAGGAGCCCGACAGTCCTTTGCCGGCTGTGAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCCTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DAGIPSFLVVPVPRRGLALLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLTPPEC*LGSSAG Trigger: ACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGT...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINTPPEC*LGSSAG Trigger: ACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGT...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASALIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTGCACACCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKGKDSPSVDPFPSAHLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...GTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | GCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCACTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: AGIPSFLVVPVPRRGLASLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...TGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCACAGCCGGCAAAGGACTGTCGGGCTCCTCAAGTTCGGAACGCAAACAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PISQPAKDCRAPQVRNANSLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...GTTTGCGTTCCGAACTTGAGGAGCCCGACAGTCCTTTGCCGGCTGTGAAATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTCAGCCTGCTCTCCTCCATCAGCTGAGAAGAGCGGCTTCCGGTGAGCAGCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALQPALLHQLRRAASGEQHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...CTGCTCACCGGAAGCCGCTCTTCTCAGCTGATGGAGGAGAGCAGGCTGAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACACCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WHPKLFSSSSSSERSGLSSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASAHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGAACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGTWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGT...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLTWVFG*SAPSCM Trigger: CATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGT...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CWHPKLFSSSSSSERSGLNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACAAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCATTCCCAACCCCTCAGTCAGGAGGCACTGAATCAGTCCTGTCCAGTGCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLHSQPLSQEALNQSCPVPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...CACTGGACAGGACTGATTCAGTGCCTCCTGACTGAGGGGTTGGGAATGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSFLVVPVPRRGLASASLLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: WHPKLFSSSSSSERSGLSLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCCTTCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: SKKPPLFPYGLEMAPPSLLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...AAGGCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GIPSFLVVPVPRRGLASASLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAIEGCL*SASKFS Trigger: GGAGAATTTGCTGGCTGAGCATAGACACCCCTCAAT...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000171479.8 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | GGAGAAACTCAGGGCTCAATGGTGCTTTTAAACAGCCCCAAAGGTCACGGGCTACCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GETQGSMVLLNSPKGHGLPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...TAGCCCGTGACCTTTGGGGCTGTTTAAAAGCACCATTGAGCCCTGAGTTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| 3UTR CAA 72 bp | AAAGGTTTGTCACAGGGGAAGACCCTGGCCATCACGTaGAAGAGCAGTAAGGGAGCCAACAAAGGGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLSQGKTLAIT*KSSKGANKGVY Trigger: GTAAACCCCTTTGTTGGCTCCCTTACTGCTCTTCAACGTGATGGCCAGGGTCTTCCCCTGTGACAAACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGCATATAGGAAGCCCATaGGCATGTCTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLHIGSP*ACLPCP Trigger: AGGGCAGGGAAGACATGCTCATGGGCTTCCTATATG...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACAAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSWLISGKGKRPKLEGNTSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGAAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLLCTRMSSDSVFRSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CWHPKLFSSSSSSERSGLPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | GCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCACCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGIPSFLVVPVPRRGLASPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...TGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR TCA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACACTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSWLISGKGKRPKLEGNTLLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCCTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLLLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGAAACAGAAGAACCAAGTCTATGACTCATGCTTGGCTCCTCTTCTTTCAGACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRRTKSMTHAWLLFFQTPPEC*LGSSAG Trigger: ACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGT...CTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | TCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTCAGCCTACACCACCGGAATGCTaGCTTGGGTCTTCGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLQEVTTSIHIALQPTPPEC*LGSSAG Trigger: ACCAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGT...AGGCTGAAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSFLVVPVPRRGLASASLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCTCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTPSIYLVTCLIFHTARGLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...ACCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | GCCTGTCCTAGGCAGAGGAAGGAGCCTCTCCAGGTGACATGCATACATAGAAAGAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ACPRQRKEPLQVTCIHRKSLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...CTTTCTATGTATGCATGTCACCTGGAGAGGCTCCTTCCTCTGCCTAGGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DAGIPSFLVVPVPRRGLASLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTLHLPGDLSHFPHCKRIEGCL*SASKFS Trigger: GGAGAATTTGCTGGCTGAGCATAGACACCCCTCAAT...CCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCTTCCCTATGTCCATTTaGAAACTCCAGGGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLFPMSI*KLQGFL Trigger: CAGAAAGCCCTGGAGTTTGCAAATGGACATAGGGAA...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACACCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSWLISGKGKRPKLEGNTPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | AGGGATGCCATTGAGGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCAGTTCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RDAIEGCLCSASKFSTSVPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...AACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSDAGIPSFLVVPVPRRGSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...ACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCACTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGIPSFLVVPVPRRGLASLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...TGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGCAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | CTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGCAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTRMSSDSVFRLTLGQEQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...CTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR CAA 72 bp | AAGTTCAAAATCATGTCCCTCCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCAATCTGCCCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFKIMSLLSRVV*VASNTAICPLS Trigger: AGAGAGTGGGCAGATTGCGGTGTTTGATGCCACCAATACCACTCGGGAGAGGAGGGACATGATTTTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
||
| CDS-3UTR TCA 90 bp | GCTGTTGAAGACTTTCTGAGGCACAGTGTAGTACTATTCCTGTTAGGCATGAGGCATATAGGAAGCCCATaGGCATGTCTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVEDFLRHSVVLFLLGMRHIGSP*ACLPCP Trigger: AGGGCAGGGAAGACATGCTCATGGGCTTCCTATATG...CCTCATGCCTAACAGGAATAGTACTACACTGTGCCTCAGAAAGTCTTCAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GAGACCTTCACTTTTGCCTGGAGAAACTCAGGGCTCAATGGTGCTTTTAAACAGCATATAGGAAGCCCATaGGCATGTCTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFTFAWRNSGLNGAFKQHIGSP*ACLPCP Trigger: AGGGCAGGGAAGACATGCTCATGGGCTTCCTATATG...CTGTTTAAAAGCACCATTGAGCCCTGAGTTTCTCCAGGCAAAAGTGAAGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGTTACAGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGCATATAGGAAGCCCATaGGCATGTCTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAVTATAFQRSHQLDRHKHIGSP*ACLPCP Trigger: AGGGCAGGGAAGACATGCTCATGGGCTTCCTATATG...CTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCTGTAACTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | ACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTGACAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSIYLVTCLIFHTARGDNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...GTCACCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | CTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGCTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LCTRMSSDSVFRLTLGQELLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...CTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | AGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGGGGCATGTCTGCTCTTGGGGAAGTTGTaGGTTGGCTTGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSFPEITSIRQTQGACLLLGKL*VGLSRC Trigger: ACATCGTGACAAGCCAACTCACAACTTCCCCAAGAG...CAGACATGCCCCTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCGTTTATAGCTGCTGTTaGAGTCTTCTGGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAVYSCC*SLLGKM Trigger: CATTTTCCCCAGAAGACTGCAACAGCAGCTATAAAC...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGACTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLLCTRMSSDSVFRLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR GCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CWHPKLFSSSSSSERSGLFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WHPKLFSSSSSSERSGLSFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCATCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSFLVVPVPRRGLASASSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGGAAACACACAGTTACACCACCGGAATGCTGACTTGGGTCTTCGGCTGCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEGNTQLHHRNADLGLRLHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...CAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGATCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTATCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCACGGAACCGCCAGCAGTTCATCACATCCTACTTAGGTAACAGTCTGCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WESRNRQQFITSYLGNSLLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...CAGACTGTTACCTAAGTAGGATGTGATGAACTGCTGGCGGTTCCGTGACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKLRIVSHEKRQELSPYVTGMLT*VFGWSA Trigger: GGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGT...GACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR TCA 90 bp | GCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCACACATTAGGCAGAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARPHLETNSETVCSHIRQSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...CTGCCTAATGTGTGAACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGCTCTCCAGGGCAGCAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGQQKLRIVSHEKRQSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...TTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTAGCCTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CSSLSDAGIPSFLVVPVPSPELC*PGISGL Trigger: TAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACT...AGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAGGCTAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGAAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR TCA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTCTAGCAGCCAGACTCTGCACCAAAGAGCATGGAACAACAAAAACCTCCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GKSSSQTLHQRAWNNKNLPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...GAGGTTTTTGTTGTTCCATGCTCTTTGGTGCAGAGTCTGGCTGCTAGACTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR GCA 90 bp | CTATGCTCAGCCAGCAAATTCTCCACTTCAGTTGGCTTGTCACGATGTGTGTCTCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSASKFSTSVGLSRCVSLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...AGACACACATCGTGACAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
||
| CDS-3UTR GCA 90 bp | GGCGTAAAGCTGTTCCTTCTCATCCTTACAGGGGTTTGGCTCTTGGGGAAGTTGTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVKLFLLILTGVWLLGKLFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...CAACTTCCCCAAGAGCCAAACCCCTGTAAGGATGAGAAGGAACAGCTTTACGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR GCA 90 bp | GCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCACACATTAGGCAGCTCTTGATCTCGGAGTaGAAATTCCTCTGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: ARPHLETNSETVCSHIRQLLISE*KFLWVP Trigger: CGGTACCCAGAGGAATTTGCACTCCGAGATCAAGAG...CTGCCTAATGTGTGAACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACAAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSWLISGKGKRPKLEGNTSLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLSLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTGCACACCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGKGKDSPSVDPFPSAHHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...GTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHPKLFSSSSSSERSGLSHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACACATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CCA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGACTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLLCTRMSSDSVFRLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGACTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSDAGIPSFLVVPVPRRLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...TCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | ACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTGACCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSIYLVTCLIFHTARGDLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...GTCACCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKLFSSSSSSERSGLSLTLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CCA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTACACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTCCCTGAAGCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGFPEARPHLETNSETVCHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...ACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGCTTCAGGGAACCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGACACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLTPSIYLVTCLIFHTARHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...TCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR TCA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHTHELRFCFQINVGTGVPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACAGTTTATAGCTGCTGTTaGAGTCTTCTGGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSWLISGKGKRPKLEGNTVYSCC*SLLGKM Trigger: CATTTTCCCCAGAAGACTGCAACAGCAGCTATAAAC...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCTCTCCAGGGCAGCAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAACTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPGQQKLRIVSHEKRQLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...TTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| CDS-3UTR GCA 90 bp | GTCTTCCAACAACAATCTGATTCTTCTGAAAGAGACACCCACTCACTGATGCCCCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VFQQQSDSSERDTHSLMPLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...GGGCATCAGTGAGTGGGTGTCTCTTTCAGAAGAATCAGATTGTTGTTGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| CDS-3UTR GCA 90 bp | AGGGATGCCATTGAGGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCAGTTTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RDAIEGCLCSASKFSTSVFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...AACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
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| CDS-3UTR GCA 90 bp | CTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSDAGIPSFLVVPVPRRGFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...ACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR GCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACTCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR GCA 90 bp | AGAGGGTTCCCTGAAGCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGFPEARPHLETNSETVCSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...ACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGCTTCAGGGAACCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR GCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGTCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR GCA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGCATATAGGAAGCCCATaGAGAACTCACAGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTHELRFCFQINVGTGVHIGSP*RTHSMS Trigger: AGACATGCTGTGAGTTCTGCATGGGCTTCCTATATG...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGGCTGTTGCAGTCTTCTaGGGAAAATGTACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAALHTHELRFCFQINVGAVAVF*GKCTIL Trigger: GAGAATAGTACATTTTCCCCAGAAGACTGCAACAGC...CCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| CDS-3UTR CCA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGAGCTGTTGCAGTCTTCTaGGGAAAATGTACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLLCTRMSSDSVFRAVAVF*GKCTIL Trigger: GAGAATAGTACATTTTCCCCAGAAGACTGCAACAGC...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCCTTCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKPPLFPYGLEMAPPSLHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...AAGGCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTCCCGAGTGGTATTGGTaGCATCAAACACCGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSFSTLQEVTTSIHIALPEWYW*HQTPQS Trigger: AGATTGCGGTGTTTGATGCCACCAATACCACTCGGG...AAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGAGACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | GTTCAGGCTGTTGAAGACTTTCTGAGGCACAGTGTAGTACTATTCCTGTTAGGCCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQAVEDFLRHSVVLFLLGHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...GCCTAACAGGAATAGTACTACACTGTGCCTCAGAAAGTCTTCAACAGCCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGGAAGGGAAAAGACTCTCCCAGTGTAGATCCATTCCCGAGTGCACACAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGKGKDSPSVDPFPSAHNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...GTGTGCACTCGGGAATGGATCTACACTGGGAGAGTCTTTTCCCTTCCCTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGIPSFLVVPVPRRGLASNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...TGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HPKLFSSSSSSERSGLSLNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| 3UTR CAA 72 bp | TTAGAGCCAGCTCTCCAGGGCAGCAAAAACTTAGGATaGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEPALQGSKNLG*FLMKRGKSSHP Trigger: AGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGCTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSFSTLQEVTTSIHIALNFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...AAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGAGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGAGTTTATAGCTGCTGTTaGAGTCTTCTGGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGVYSCC*SLLGKM Trigger: CATTTTCCCCAGAAGACTGCAACAGCAGCTATAAAC...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| CDS-3UTR GCA 90 bp | TGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGGGTTTATAGCTGCTGTTaGAGTCTTCTGGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CTRMSSDSVFRLTLGQEWVYSCC*SLLGKM Trigger: CATTTTCCCCAGAAGACTGCAACAGCAGCTATAAAC...CCACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCTRMSSDSVFRLTLGQEFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...CTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGATTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGTTCCACTTTGCAACCTaGGCCTTTATCCAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHTHELRFCFQINVGTGVFHFAT*AFIQEV Trigger: TACTTCTTGGATAAAGGCGCAGGTTGCAAAGTGGAA...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050406.11 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTCCCTGAAGCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTGCTGTTGCAGTCTTCTaGGGAAAATGTACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGFPEARPHLETNSETVCAVAVF*GKCTIL Trigger: GAGAATAGTACATTTTCCCCAGAAGACTGCAACAGC...ACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGCTTCAGGGAACCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGCTGTTGCAGTCTTCTaGGGAAAATGTACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLAVAVF*GKCTIL Trigger: GAGAATAGTACATTTTCCCCAGAAGACTGCAACAGC...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAGCCTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSLSDAGIPSFLVVPVPLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...AGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAGGCTAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAALHTHELRFCFQINVGLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...CCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLLCTRMSSDSVFRLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGATTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSDAGIPSFLVVPVPRRLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...TCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACCGTTGCTCAATCTCTGAATATGTCATCTCCTCACACACGCCAGCATTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTVAQSLNMSSPHTRQHLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...ATGCTGGCGTGTGTGAGGAGATGACATATTCAGAGATTGAGCAACGGTACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
||
| CDS-3UTR CCA 90 bp | AACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCCATTCAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLGLFLMKRGKSSHPMSIQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...AATGGACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCACCGGAATGCTGACTTaGGTCTTCGGCTGGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKIPSDHQKGVYFNAKASTGMLT*VFGWSA Trigger: GGCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGT...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| 3UTR CAA 72 bp | ATCAGGAAACAGAAGAACCAAGTCTATGACTCATGCTaGGCTCCTCTTCTTTCAGATCATCCCATCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRKQKNQVYDSC*APLLSDHPIWG Trigger: TCCCCAGATGGGATGATCTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR TCA 90 bp | TCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTCAGCCTCCGTTGCTCAATCTCTaGATATGTCATCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLQEVTTSIHIALQPPLLNL*ICHLLT Trigger: TGTGAGGAGATGACATATTCAGAGATTGAGCAACGG...AGGCTGAAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGTTACAGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAVTATAFQRSHQLDRHKFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...CTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCTGTAACTGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGACATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLTPSIYLVTCLIFHTARHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...TCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MAEAALHTHELRFCFQINHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000186867.7 ENSMUST00000191301.2 |
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| CDS-3UTR CCA 90 bp | GGTAAGGTACAATACACTTTGTGGCTTCTGCACTCTTCTTCAGAAATAACACAGTCTCCCGAGTGGTATTaGTGGCATCAAACACCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKVQYTLWLLHSSSEITQSPEWY*WHQTPQ Trigger: TTGCGGTGTTTGATGCCACCAATACCACTCGGGAGA...CTGTGTTATTTCTGAAGAAGAGTGCAGAAGCCACAAAGTGTATTGTACCTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTCCCTGAAGCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFPEARPHLETNSETVCLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...ACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGCTTCAGGGAACCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | CTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSDAGIPSFLVVPVPRRGNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...ACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR TCA 90 bp | ATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCTGTCATATAGGAAGCCCATaGGCATGTCTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MVFANLVQKRQELTCSGCHIGSP*ACLPCP Trigger: AGGGCAGGGAAGACATGCTCATGGGCTTCCTATATG...ACAGCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR GCA 90 bp | TCATTTTCCACACTGCAAGAGGTGACCACTAGCATTCATATTGCACTTCAGCCTTTTAACATCTTCCAGTaGCACCAGAGCACACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLQEVTTSIHIALQPFNIFQ*HQSTLF Trigger: AAACAGTGTGCTCTGGTGGCACTGGAAGATGTTAAA...AGGCTGAAGTGCAATATGAATGCTAGTGGTCACCTCTTGCAGTGTGGAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | GCTGTTGAAGACTTTCTGAGGCACAGTGTAGTACTATTCCTGTTAGGCATGAGGCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVEDFLRHSVVLFLLGMRHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...CCTCATGCCTAACAGGAATAGTACTACACTGTGCCTCAGAAAGTCTTCAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR CCA 90 bp | CAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCCACACTTTAAGGTCCTaGATCTCCTGTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLRIVSHEKRQELSPYVHTLRS*ISCSSR Trigger: TCTGGAGGAACAGGAGATCCAGGACCTTAAAGTGTG...GACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
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| CDS-3UTR CCA 90 bp | AGAATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCCAGGGGTTTGGCTCTTaGGGAAGTTGTGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMVFANLVQKRQELTCSGQGFGS*GSCELA Trigger: AGCCAACTCACAACTTCCCCAAGAGCCAAACCCCTG...GCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR CCA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGAAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR CAA 72 bp | ACCAGGAATCTCTGGCCTACATTTATCACCAGAATATaGGCAGCAATGACATCAGGATCATCACAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRNLWPTFITRI*AAMTSGSSQTD Trigger: ATCTGTCTGTGATGATCCTGATGTCATTGCTGCCAATATTCTGGTGATAAATGTAGGCCAGAGATTCCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| 3UTR CAA 72 bp | ATTCCAAGATTCGGGATGAGTAGAAAACACTTACAGTaGGCTTGTCACGATGTGTGTCTACAGCATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IPRFGMSRKHLQ*ACHDVCLQHPH Trigger: ATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTGTAAGTGTTTTCTACTCATCCCGAATCTTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186867.7 |
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| CDS-3UTR GCA 90 bp | GGTAAGGTACAATACACTTTGTGGCTTCTGCACTCTTCTTCAGAAATAACACAGAGTTTGAAGATGATGTaGAGGGGGCACCTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GKVQYTLWLLHSSSEITQSLKMM*RGHLKY Trigger: ATACTTGAGGTGCCCCCTGCACATCATCTTCAAACT...CTGTGTTATTTCTGAAGAAGAGTGCAGAAGCCACAAAGTGTATTGTACCTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGAAACAGAAGAACCAAGTCTATGACTCATGCTTGGCTCCTCTTCTTTCAGTTGACCAGGAATCTCTaGCCTACATTTATCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRRTKSMTHAWLLFFQLTRNL*PTFITF Trigger: AAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAA...CTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | ATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCTGTCTGATAGGACTTGACTaGTTCACGTCGATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVFANLVQKRQELTCSGCLIGLD*FTSIYP Trigger: GGGGTATATCGACGTGAAGCAGTCAAGTCCTATCAG...ACAGCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | AGAATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMVFANLVQKRQELTCSGIEGCL*SASKFS Trigger: GGAGAATTTGCTGGCTGAGCATAGACACCCCTCAAT...GCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
||
| CDS-3UTR TCA 90 bp | GATATAAGGATAGACTTAAAGGACACATGTGAAGGACAATTAGGTTGTTACATCAACTTCTTCAGAGCATaGGCAAACTGCTTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DIRIDLKDTCEGQLGCYINFFRA*ANCFPR Trigger: GCGAGGAAAGCAGTTTGCTCATGCTCTGAAGAAGTT...GATGTAACAACCTAATTGTCCTTCACATGTGTCCTTTAAGTCTATCCTTATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCCATAACAATGAGTGTTaGGGAGTTGGTCATATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLRIVSHEKRQELSPYVHNNEC*GVGHIG Trigger: TCCTATATGACCAACTCCCCAACACTCATTGTTATG...GACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCTGTCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MVFANLVQKRQELTCSGCLIIVV*VKGLVS Trigger: ACTTACCAGCCCCTTGACCCAGACAACTATGATAAG...ACAGCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGGATAGACTTAAAGGACACATGTGAAGGACAATTAGGTTGTTACATCTCATCCTCTGGGTACCGTTaGTCAATCTCTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRIDLKDTCEGQLGCYISSSGYR*SISEYV Trigger: GACATATTCAGAGATTGAGCAACGGTACCCAGAGGA...TGAGATGTAACAACCTAATTGTCCTTCACATGTGTCCTTTAAGTCTATCCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CCA 90 bp | AGAATGGTATTTGCAAACTTGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGCGCTGTTGCAGTCTTCTaGGGAAAATGTACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RMVFANLVQKRQELTCSGAVAVF*GKCTIL Trigger: GAGAATAGTACATTTTCCCCAGAAGACTGCAACAGC...GCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCAACACTGTAATTTCTTaGACGCCTTATTGTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLRIVSHEKRQELSPYVNTVIS*TPYCVR Trigger: TCGAACACAATAAGGCGTCCAAGAAATTACAGTGTT...GACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| 3UTR CAA 72 bp | GTAACACTGAATTCTACTGGTAAGGTACAATACACTTaGTGGCTTCTGCACTCTTCTTCAGAAATAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLNSTGKVQYT*WLLHSSSEITQ Trigger: CTGTGTTATTTCTGAAGAAGAGTGCAGAAGCCACAAAGTGTATTGTACCTTACCAGTAGAATTCAGTGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGGATAGACTTAAAGGACACATGTGAAGGACAATTAGGTTGTTACATCTCAGTTTATAGCTGCTGTTaGAGTCTTCTGGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IRIDLKDTCEGQLGCYISVYSCC*SLLGKM Trigger: CATTTTCCCCAGAAGACTGCAACAGCAGCTATAAAC...TGAGATGTAACAACCTAATTGTCCTTCACATGTGTCCTTTAAGTCTATCCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| 3UTR CAA 72 bp | AGTACTCAATGCCTAAGTAGAATGGTATTTGCAAACTaGGTTCAAAAGAGACAAGAACTAACTTGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STQCLSRMVFAN*VQKRQELTCSG Trigger: GCCTGAACAAGTTAGTTCTTGTCTCTTTTGAACCAAGTTTGCAAATACCATTCTACTTAGGCATTGAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
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| CDS-3UTR CAA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACAAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: PKLFSSSSSSERSGLSLTRGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: CWHPKLFSSSSSSERSGLRGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS CCA 90 bp | GCCATTGAGGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCTTaGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCCAGAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: AIEGCLCSASKFSTS*VFGWSAPSCMSRAR Trigger: CCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
||
| CDS-3UTR CAA 90 bp | TATGGGCTAGAGATGGCCCCGCCTAGCCTTCATTCCCAACCCCTCAGTCAGGAGCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YGLEMAPPSLHSQPLSQELSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...CTCCTGACTGAGGGGTTGGGAATGAAGGCTAGGCGGGGCCATCTCTAGCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | GCACTTCAGCCTGCTCTCCTCCATCAGCTGAGAAGAGCGGCTTCCGGTGAGCAGCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALQPALLHQLRRAASGEQHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...CTGCTCACCGGAAGCCGCTCTTCTCAGCTGATGGAGGAGAGCAGGCTGAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSFLVVPVPRRGLASASHRNAD*GLRLVR Trigger: GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTG...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIPSFLVVPVPRRGLASAIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | CTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LCTRMSSDSVFRLTLGQERGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...CTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: MAEAALHTHELRFCFQINRGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | AGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGGGGCATGTCTGAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SHSFPEITSIRQTQGACLRGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...CAGACATGCCCCTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | AGAGAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGACACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: REWLRLLCTRMSSDSVFRHRNAD*GLRLVR Trigger: GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTG...TCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GCCTCACATCAGGAGAGCAAAGTGAGGGATGCCATTGAGGGGTGTCTATGCTCACTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASHQESKVRDAIEGCLCSLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...TGAGCATAGACACCCCTCAATGGCATCCCTCACTTTGCTCTCCTGATGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000189167.7 |
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| CDS-3UTR CAA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CWHPKLFSSSSSSERSGLLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GIPSFLVVPVPRRGLASAHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
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| CDS-3UTR CAA 90 bp | GCTGTTGAAGACTTTCTGAGGCACAGTGTAGTACTATTCCTGTTAGGCATGAGGAGAGGGCTGAGGGGCTaGAGGGGTCGGCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: AVEDFLRHSVVLFLLGMRRGLRG*RGRLPT Trigger: TGTTGGGAGCCGACCCCTCAAGCCCCTCAGCCCTCT...CCTCATGCCTAACAGGAATAGTACTACACTGTGCCTCAGAAAGTCTTCAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGCACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLHRNAD*GLRLVR Trigger: GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTG...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS TCA 90 bp | GCCCATGCAGAACTCACAGCATGTCTTCCCTGCCCTTCGCAGATTTaGGGCGTGGGGTTTATAGCTGCTGTTGCAGTCTTCTGGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHAELTACLPCPSQI*GVGFIAAVAVFWGK Trigger: TTTTCCCCAGAAGACTGCAACAGCAGCTATAAACCCCACGCCTCAAATCTGCGAAGGGCAGGGAAGACATGCTGTGAGTTCTGCATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
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| CDS-3UTR CAA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCAATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSFLVVPVPRRGLASASIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CAA 90 bp | TGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WHPKLFSSSSSSERSGLSATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...GCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CAA 90 bp | CATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPKLFSSSSSSERSGLSLATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...GAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CAA 90 bp | GCCTGTCCTAGGCAGAGGAAGGAGCCTCTCCAGGTGACATGCATACATAGAAAGCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACPRQRKEPLQVTCIHRKHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...CTTTCTATGTATGCATGTCACCTGGAGAGGCTCCTTCCTCTGCCTAGGACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | AGGGATGCCATTGAGGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCAGTTCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDAIEGCLCSASKFSTSVLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...AACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
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| CDS-3UTR CAA 90 bp | ACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAGGTGACATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSIYLVTCLIFHTARGDIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...GTCACCTCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CAA 90 bp | TGGGAGTCACGGAACCGCCAGCAGTTCATCACATCCTACTTAGGTAACAGTCTGGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WESRNRQQFITSYLGNSLATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...CAGACTGTTACCTAAGTAGGATGTGATGAACTGCTGGCGGTTCCGTGACTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCAGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSFLVVPVPRRGLASASATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSFLVVPVPRRGLASASHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCTTCCCTATGTCCATTaGCAAACTCCAGGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GIPSFLVVPVPRRGLASALPYVH*QTPGLS Trigger: AGAAAGCCCTGGAGTTTGCAAATGGACATAGGGAAG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGACTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLTPSIYLVTCLIFHTARLSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...TCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTHELRFCFQINVGTGVIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | TTCCTGACACCCTCCATTTACCTGGTGACCTGTCTCATTTTCCACACTGCAAGAATCTTCCCCAAAAGGTaGAACTCGCTCTCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLTPSIYLVTCLIFHTARIFPKR*NSLSPC Trigger: GCACGGCGAGAGCGAGTTCAACCTTTTGGGGAAGAT...TCTTGCAGTGTGGAAAATGAGACAGGTCACCAGGTAAATGGAGGGTGTCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGCATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAALHTHELRFCFQINVGHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...CCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCTTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CWHPKLFSSSSSSERSGLFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...GAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | TGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGGGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTRMSSDSVFRLTLGQEWATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...CCACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACATCCTTACAGGGGTTaGGCTCTTGGGGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLCTRMSSDSVFRLTLGHPYRG*ALGEVV Trigger: CACAACTTCCCCAAGAGCCAAACCCCTGTAAGGATG...TCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCCAACACTGTAATTTCTaGGACGCCTTATTGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GIPSFLVVPVPRRGLASAQHCNF*DALLCS Trigger: CGAACACAATAAGGCGTCCAAGAAATTACAGTGTTG...GGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTGTAATTGTTTCCACTTaGCAACCTCCCCACCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSDAGIPSFLVVPVPRRGVIVST*QPPHQG Trigger: ACCCTGGTGGGGAGGTTGCAAAGTGGAAACAATTAC...ACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCACATTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKLFSSSSSSERSGLSLTFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...TGTGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCTTGGTTGATTAGTGGCAAGGGCAAGAGGCCAAAGCTGGAGGGAAACACATTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSWLISGKGKRPKLEGNTFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...TGTGTTTCCCTCCAGCTTTGGCCTCTTGCCCTTGCCACTAATCAACCAAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | GATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCCAACACTGTAATTTCTaGGACGCCTTATTGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DAGIPSFLVVPVPRRGLAQHCNF*DALLCS Trigger: CGAACACAATAAGGCGTCCAAGAAATTACAGTGTTG...GGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000191347.7 |
||
| CDS GCA 90 bp | AATCATAACAATGAGTGTTGGGGAGTTGGTCATATAGGAAGCCCATaGAGAACTCACAGCATGTCTTCCCTGCCCTTCGCAGATTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NHNNECWGVGHIGSP*RTHSMSSLPFADLR Trigger: CCTCAAATCTGCGAAGGGCAGGGAAGACATGCTGTGAGTTCTGCATGGGCTTCCTATATGACCAACTCCCCAACACTCATTGTTATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
||
| CDS-3UTR CAA 90 bp | TCAGGAAACAGAAGAACCAAGTCTATGACTCATGCTTGGCTCCTCTTCTTTCAGGCCACAGGAGTAAGTTaGAAGATGATGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGNRRTKSMTHAWLLFFQATGVS*KMMCRG Trigger: CCCCCTGCACATCATCTTCAAACTTACTCCTGTGGC...CTGAAAGAAGAGGAGCCAAGCATGAGTCATAGACTTGGTTCTTCTGTTTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCACGGAACCGCCAGCAGTTCATCACATCCTACTTAGGTAACAGTCTGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: WESRNRQQFITSYLGNSLLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CAGACTGTTACCTAAGTAGGATGTGATGAACTGCTGGCGGTTCCGTGACTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGGCCTCAGCCTCATTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: IPSFLVVPVPRRGLASASLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...TGAGGCTGAGGCCAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGATTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSDAGIPSFLVVPVPRRFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...TCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACTGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189167.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCCACCGGAATGCTGACTaGGGTCTTCGGCTGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IKIPSDHQKGVYFNAKASHRNAD*GLRLVR Trigger: GCGGACCAGCCGAAGACCCAAGTCAGCATTCCGGTG...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGTAATTGTTTCCACTTaGCAACCTGCGCCTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLLCTRMSSDSVFRLTLVIVST*QPAPLS Trigger: GGATAAAGGCGCAGGTTGCAAAGTGGAAACAATTAC...CAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050406.11 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: EAALHTHELRFCFQINVGLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CAA 90 bp | AGTGATGCTGGCATCCCAAGCTTTTTAGTAGTTCCAGTTCCTCGGAGAGGTCTGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: SDAGIPSFLVVPVPRRGLLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CAGACCTCTCCGAGGAACTGGAACTACTAAAAAGCTTGGGATGCCAGCATCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS-3UTR CAA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MAEAALHTHELRFCFQINFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHTHELRFCFQINVGTGVFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | CTATGCTCAGCCAGCAAATTCTCCACTTCAGTTGGCTTGTCACGATGTGTGTCTTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCSASKFSTSVGLSRCVSFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...AGACACACATCGTGACAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189167.7 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGTTACAGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAATTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSYSHSFPEITSIRQTQFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...TTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCTGTAACTGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | CTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGCAACACTGTAATTTCTaGGACGCCTTATTGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LHTHELRFCFQINVGTGVQHCNF*DALLCS Trigger: CGAACACAATAAGGCGTCCAAGAAATTACAGTGTTG...CACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | GAATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAAAAGATCCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EWLRLLCTRMSSDSVFRLKDPRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGGATCTTT...TAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191301.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCAAGAAGCCACCTTTATTTCCTTATGGGCTAGAGATGGCCCCGCCTAGCTTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISKKPPLFPYGLEMAPPSFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...GCTAGGCGGGGCCATCTCTAGCCCATAAGGAAATAAAGGTGGCTTCTTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
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| CDS-3UTR CAA 90 bp | ATGGCTGAGGCTGCTCTGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: MAEAALHTHELRFCFQINLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...GTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCAGAGCAGCCTCAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CAA 90 bp | TGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: CTRMSSDSVFRLTLGQEWLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CCACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CAA 90 bp | GAGACCTTCACTTTTGCCTGGAGAAACTCAGGGCTCAATGGTGCTTTTAAACAGTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETFTFAWRNSGLNGAFKQFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...CTGTTTAAAAGCACCATTGAGCCCTGAGTTTCTCCAGGCAAAAGTGAAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CAA 90 bp | GCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCACACATTAGGCAGCAACACTGTAATTTCTaGGACGCCTTATTGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPHLETNSETVCSHIRQQHCNF*DALLCS Trigger: CGAACACAATAAGGCGTCCAAGAAATTACAGTGTTG...CTGCCTAATGTGTGAACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066863.13 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTCTCCAGGGCAGCAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAACAACACTGTAATTTCTaGGACGCCTTATTGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASSPGQQKLRIVSHEKRQQHCNF*DALLCS Trigger: CGAACACAATAAGGCGTCCAAGAAATTACAGTGTTG...TTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACGCATGAGCTCAGATTCTGTTTTCAGATTAACGTTGGGACAGGAGTGGTTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: CTRMSSDSVFRLTLGQEWFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...CCACTCCTGTCCCAACGTTAATCTGAAAACAGAATCTGAGCTCATGCGTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 ENSMUST00000191301.2 |
||
| CDS-3UTR CAA 90 bp | GATATAAGGATAGACTTAAAGGACACATGTGAAGGACAATTAGGTTGTTACATCCTCTCCCGAGTGGTATaGGTGGCATCAAACACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DIRIDLKDTCEGQLGCYILSRVV*VASNTA Trigger: TGCGGTGTTTGATGCCACCAATACCACTCGGGAGAG...GATGTAACAACCTAATTGTCCTTCACATGTGTCCTTTAAGTCTATCCTTATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GCTCGTCCTCACCTAGAAACCAATTCTGAAACAGTGTGTTCACACATTAGGCAGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ARPHLETNSETVCSHIRQLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CTGCCTAATGTGTGAACACACTGTTTCAGAATTGGTTTCTAGGTGAGGACGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000189534.7 |
||
| CDS-3UTR CAA 90 bp | AACTTAGGATTGTTTCTCATGAAAAGAGGCAAGAGCTCTCACCCTATGTCCATTTTCTTGGACGCCTTATaGTGTTCGAACTGGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLGLFLMKRGKSSHPMSIFLDAL*CSNWTE Trigger: CTCTGTCCAGTTCGAACACAATAAGGCGTCCAAGAA...AATGGACATAGGGTGAGAGCTCTTGCCTCTTTTCATGAGAAACAATCCTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTTACAGCCACAGCTTTCCAGAGATCACATCAATTAGACAGACACAAGTTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PAVTATAFQRSHQLDRHKFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...CTTGTGTCTGTCTAATTGATGTGATCTCTGGAAAGCTGTGGCTGTAACTGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTCTCCAGGGCAGCAAAAACTTAGGATTGTTTCTCATGAAAAGAGGCAATTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSPGQQKLRIVSHEKRQFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...TTGCCTCTTTTCATGAGAAACAATCCTAAGTTTTTGCTGCCCTGGAGAGCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169659.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAGGTACAATACACTTTGTGGCTTCTGCACTCTTCTTCAGAAATAACACAGTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKVQYTLWLLHSSSEITQFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...CTGTGTTATTTCTGAAGAAGAGTGCAGAAGCCACAAAGTGTATTGTACCTTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | GGTAAGGTACAATACACTTTGTGGCTTCTGCACTCTTCTTCAGAAATAACACAGTTGAAGGCATTCTGCTaGGCAAAGTTCAAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: GKVQYTLWLLHSSSEITQLKAFC*AKFKIM Trigger: CATGATTTTGAACTTTGCCAAGCAGAATGCCTTCAA...CTGTGTTATTTCTGAAGAAGAGTGCAGAAGCCACAAAGTGTATTGTACCTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
||
| CDS-3UTR CAA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCTTTACCTCCAGAATATaGGCAGCAATGACATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: IKIPSDHQKGVYFNAKASFTSRI*AAMTSG Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTAAA...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| CDS-3UTR CAA 90 bp | ATAAAAATACCATCTGATCATCAGAAAGGAGTGTACTTCAATGCAAAAGCATCCTTCATAGCCTCTTCATaGTCATGTCGAAAGAAATCA | + |
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Preference number: 5 (lower is better) Translates to: IKIPSDHQKGVYFNAKASFIASS*SCRKKS Trigger: TGATTTCTTTCGACATGACAATGAAGAGGCTATGAA...GGATGCTTTTGCATTGAAGTACACTCCTTTCTGATGATCAGATGGTATTTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066863.13 ENSMUST00000171479.8 ENSMUST00000185233.7 |
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| CDS GCA 72 bp | TGCTGGACTTGGGTCTTCGGCTGGTCCGCCCCTTCTTaGATGTCCAGAGCACGGAGAGGGCTGAGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CWTWVFGWSAPS*MSRARRGLRGL Trigger: CAAGCCCCTCAGCCCTCTCCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
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| CDS GCA 72 bp | TCCACTTCTTGGGTCTTCGGCTGGTCCGCCCCTTCTTaGATGTCCAGAGCACGGAGAGGGCTGAGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: STSWVFGWSAPS*MSRARRGLRGL Trigger: CAAGCCCCTCAGCCCTCTCCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGAAGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
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| CDS TCA 72 bp | CTCCAGGGCTTTCTGTGGATGTTCTGTAGCCTGGGCTaGCCCTTGCTGGACTTGGGTCTTCGGCTGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LQGFLWMFCSLG*PLLDLGLRLVR Trigger: GCGGACCAGCCGAAGACCCAAGTCCAGCAAGGGTCAGCCCAGGCTACAGAACATCCACAGAAAGCCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
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| CDS CCA 72 bp | GGATGTTCTGTAGCCTGGGCTGACCCTTGCTGGACTTaGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GCSVAWADPCWT*VFGWSAPSCMS Trigger: GGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGTCCAGCAAGGGTCAGCCCAGGCTACAGAACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
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| CDS CCA 72 bp | GCAAACTCCAGGGCTTTCTGTGGATGTTCTGTAGCCTaGGCTGACCCTTGCTGGACTTGGGTCTTCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ANSRAFCGCSVA*ADPCWTWVFGW Trigger: CCAGCCGAAGACCCAAGTCCAGCAAGGGTCAGCCCAGGCTACAGAACATCCACAGAAAGCCCTGGAGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191347.7 |
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| CDS CCA 72 bp | TCAGCCAGCAAATTCTCCACTTCTTGGGTCTTCGGCTaGTCCGCCCCTTCTTGCATGTCCAGAGCACGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SASKFSTSWVFG*SAPSCMSRARR Trigger: TCTCCGTGCTCTGGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGAAGTGGAGAATTTGCTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
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| CDS CCA 72 bp | GGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCTTaGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GCLCSASKFSTS*VFGWSAPSCMS Trigger: GGACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
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| CDS CAA 72 bp | GGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCTaGGGTCTTCGGCTGGTCCGCCCCTTCTTGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: GVSMLSQQILHF*GLRLVRPFLHV Trigger: GACATGCAAGAAGGGGCGGACCAGCCGAAGACCCAAGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
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| CDS CAA 90 bp | AGCCCATGCAGAACTCACAGCATGTCTTCCCTGCCCTTCGCAGATTaGAGGCGTGGGGTTTATAGCTGCTGTTGCAGTCTTCTGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SPCRTHSMSSLPFAD*RRGVYSCCCSLLGK Trigger: TTTCCCCAGAAGACTGCAACAGCAGCTATAAACCCCACGCCTCAAATCTGCGAAGGGCAGGGAAGACATGCTGTGAGTTCTGCATGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
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| CDS TCA 72 bp | GAACTCACAGCATGTCTTCCCTGCCCTTCGCAGATTTaGGGCGTGGGGTTTATAGCTGCTGTTGCAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELTACLPCPSQI*GVGFIAAVAVF Trigger: GAAGACTGCAACAGCAGCTATAAACCCCACGCCTCAAATCTGCGAAGGGCAGGGAAGACATGCTGTGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
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| CDS CAA 72 bp | AAGCCCATGAGCATGTCTTCCCTGCCCTTCGCAGATTaGAGGCGTGGGGTTTATAGCTGCTGTTGCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KPMSMSSLPFAD*RRGVYSCCCSL Trigger: AAGACTGCAACAGCAGCTATAAACCCCACGCCTCAAATCTGCGAAGGGCAGGGAAGACATGCTCATGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191301.2 ENSMUST00000191347.7 |
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| CDS GCA 72 bp | AATGAGTGTTGGGGAGTTGGTCATATAGGAAGCCCATaGAGAACTCACAGCATGTCTTCCCTGCCCTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: NECWGVGHIGSP*RTHSMSSLPFA Trigger: TGCGAAGGGCAGGGAAGACATGCTGTGAGTTCTGCATGGGCTTCCTATATGACCAACTCCCCAACACTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
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| CDS GCA 72 bp | GAGAGCAAAGTGAGGGATGCCATTGAGGGGTGTCTATaGTCAGCCAGCAAATTCTCCACTTCTTGGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ESKVRDAIEGCL*SASKFSTSWVF Trigger: GAAGACCCAAGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTCAATGGCATCCCTCACTTTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187089.7 |
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| CDS CAA 72 bp | AGAACTCACAGCATGTCTTCCCTGCCCTTCGCAGATTaGAGGCGTGGGGTTTATAGCTGCTGTTGCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RTHSMSSLPFAD*RRGVYSCCCSL Trigger: AAGACTGCAACAGCAGCTATAAACCCCACGCCTCAAATCTGCGAAGGGCAGGGAAGACATGCTGTGAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186777.2 ENSMUST00000186867.7 |
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| CDS CAA 90 bp | GAGGGGTGTCTATGCTCAGCCAGCAAATTCTCCACTTCAGTTGGCTaGTCACGATGTGTGTCTACAGCATCCACATTCAGAGTAATTGTT | + |
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Preference number: 6 (lower is better) Translates to: EGCLCSASKFSTSVG*SRCVSTASTFRVIV Trigger: AACAATTACTCTGAATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACACCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
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| CDS CCA 72 bp | GTGTCTATGCTCAGCCAGCAAATTCTCCACTTCAGTTaGCTTGTCACGATGTGTGTCTACAGCATCCACATT | + |
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Preference number: 6 (lower is better) Translates to: VSMLSQQILHFS*LVTMCVYSIHI Trigger: AATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
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| CDS CAA 72 bp | CTATGCTCAGCCAGCAAATTCTCCACTTCAGTTGGCTaGTCACGATGTGTGTCTACAGCATCCACATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LCSASKFSTSVG*SRCVSTASTFR Trigger: TCTGAATGTGGATGCTGTAGACACACATCGTGACAAGCCAACTGAAGTGGAGAATTTGCTGGCTGAGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171479.8 ENSMUST00000189534.7 |
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| CDS CCA 72 bp | CACCTTTATGAAAGAAAGATCCTTATCATAGTTGTCTaGGTCAAGGGGCTGGTAAGTGACCTTGTAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: HLYERKILIIVV*VKGLVSDLVAL Trigger: GAGTGCTACAAGGTCACTTACCAGCCCCTTGACCCAGACAACTATGATAAGGATCTTTCTTTCATAAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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| CDS TCA 72 bp | AGACAATCTTACTCTGGATGTAGTCCTGAACTCTGTTaGCCAGGAATCTCTGGCCTACATTTATCACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RQSYSGCSPELC*PGISGLHLSPL Trigger: TAAAGGTGATAAATGTAGGCCAGAGATTCCTGGTCAACAGAGTTCAGGACTACATCCAGAGTAAGATTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000050406.11 ENSMUST00000066863.13 ENSMUST00000169659.8 ENSMUST00000171479.8 ENSMUST00000185233.7 ENSMUST00000187089.7 ENSMUST00000189167.7 ENSMUST00000189534.7 ENSMUST00000191347.7 |
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