Pregenerated sensors for PFKFB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025271Ensembl transcript IDs: ENSMUST00000080884.11, ENSMUST00000112713.3, ENSMUST00000153221.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTCTGCTTGCCCCGAGCTaGGAGGCCAGAGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: RAHSGQSQSLLKENKASSLLAPS*EARVTS Trigger: GGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAG...ACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAACTGCTTGCCCCGAGCTaGGAGGCCAGAGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VWELLQTYSLEVGHTQAKLLAPS*EARVTS Trigger: GGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAG...TTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCCTAGAAGGCACCGCATaGCAGCCTGGTGACAGATCA | + |
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Preference number: 4 (lower is better) Translates to: GRAHSGQSQSLLKENKASLEGTA*QPGDRS Trigger: TGATCTGTCACCAGGCTGTCATGCGGTGCCTTCTAG...GCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCTGCTTTGAGACCGAATaGAGTTGGCCAGGGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: GRAHSGQSQSLLKENKASCFETE*SWPGHR Trigger: CCTATGCCCTGGCCAACTTCATTCGGTCTCAAAGCA...GCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCCTGGTAAACCCACCATaGTCACCATTGTGGGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GRAHSGQSQSLLKENKASLVNPP*SPLWGN Trigger: ATTCCCCCACAATGGTGATCATGGTGGGTTTACCAG...GCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | AGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTGCTTTGAGACCGAATaGAGTTGGCCAGGGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: RAHSGQSQSLLKENKASSCFETE*SWPGHR Trigger: CCTATGCCCTGGCCAACTTCATTCGGTCTCAAAGCA...ACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTAGGGAGCTGATGCTTTaGGACCGAATGAAGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHTQAKARVCLRRTRPAVRELML*DRMKLA Trigger: GGCCAACTTCATTCGGTCTCAAAGCATCAGCTCCCT...AACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGCTAGAAGGCACCGCATaGCAGCCTGGTGACAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SGGRAHSGQSQSLLKENKLEGTA*QPGDRS Trigger: TGATCTGTCACCAGGCTGTCATGCGGTGCCTTCTAG...CTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCCTCGGGTTCACGGGTaGTGTCCACATTCTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSPRVHG*CPHSQA Trigger: AGCCTGAGAATGTGGACATCACCCGTGAACCCGAGG...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGTTCCTGTAGCTCACTaGCTCTCGTCGATACTGACC | + |
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Preference number: 4 (lower is better) Translates to: EVGHTQAKARVCLRRTRPVPVAH*LSSILT Trigger: GGTCAGTATCGACGAGAGGCAGTGAGCTACAGGAAC...TGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCACTGGTAAACCCACCATaGTCACCATTGTGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVGHTQAKARVCLRRTRPLVNPP*SPLWGN Trigger: ATTCCCCCACAATGGTGATCATGGTGGGTTTACCAG...TGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | CCTGTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCGCAACCTGGTTTGAGTaGGTTCTCCCATCTCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: PVWELLQTYSLEVGHTQAATWFE*VLPSLE Trigger: CTCGAGAGATGGGAGAACTCACTCAAACCAGGTTGC...GGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | CCTGTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCGTTCCTGTAGCTCACTaGCTCTCGTCGATACTGACC | + |
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Preference number: 4 (lower is better) Translates to: PVWELLQTYSLEVGHTQAVPVAH*LSSILT Trigger: GGTCAGTATCGACGAGAGGCAGTGAGCTACAGGAAC...GGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | CCTGTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCTATGCAGAGGACACTTaGGATAGGGCAGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVWELLQTYSLEVGHTQAYAEDT*DRAAHL Trigger: CAGATGAGCTGCCCTATCTCAAGTGTCCTCTGCATA...GGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCGACCTTCCTCACGGCTaGGATACTTATGGACATCCT | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSDLPHG*DTYGHP Trigger: AGGATGTCCATAAGTATCTCAGCCGTGAGGAAGGTC...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCATAGGGCAGCTCATCTaGACTTTTATCCAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRAHSGQSQSLLKENKASIGQLI*TFIQEV Trigger: TACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTAT...GCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | CTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTATGCAGAGGACACTTaGGATAGGGCAGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQTYSLEVGHTQAKARVYAEDT*DRAAHL Trigger: CAGATGAGCTGCCCTATCTCAAGTGTCCTCTGCATA...GACTCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCGCAGGCTGCTACTGCTaGTATGTGGAATCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSAGCYC*YVESRS Trigger: AGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGC...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | GGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTGGCCTCCATGTTGTCTaGGCGAAAGAATTCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHTQAKARVCLRRTRPAVGLHVV*AKEFIV Trigger: AACTATGAATTCTTTCGCCCAGACAACATGGAGGCC...AACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | GGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTCATAGGACTCTCCCTTaGGATAGCGGTAACGATATT | + |
|
Preference number: 4 (lower is better) Translates to: GHTQAKARVCLRRTRPAVHRTLP*DSGNDI Trigger: AATATCGTTACCGCTATCCCAAGGGAGAGTCCTATG...AACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | AGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTATAGGGCAGCTCATCTaGACTTTTATCCAGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RAHSGQSQSLLKENKASSIGQLI*TFIQEV Trigger: TACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTAT...ACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCTACTGCTGCTATGTaGAATCCAGATCTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SGGRAHSGQSQSLLKENKATAAM*NPDLLQ Trigger: TTGCAGAAGATCTGGATTCCACATAGCAGCAGTAGC...CTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTGCCTCTCGTCGATACTaGCCTAAATTAAACACTTTA | + |
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Preference number: 4 (lower is better) Translates to: GHTQAKARVCLRRTRPAVASRRY*PKLNTL Trigger: TAAAGTGTTTAATTTAGGTCAGTATCGACGAGAGGC...AACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGACCAAAGGCTGGTAGTTaGTCTCATAGCACTCAATTC | + |
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Preference number: 4 (lower is better) Translates to: ELLQTYSLEVGHTQAKARPKAGS*SHSTQF Trigger: GAATTGAGTGCTATGAGATCAACTACCAGCCTTTGG...TCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | GGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCTTGCTTGATGTTTTCTaGAATGATGTCTGGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: GRAHSGQSQSLLKENKASLLDVF*NDVWVI Trigger: AATGACCCAGACATCATTGCAGAAAACATCAAGCAA...GCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCGGCCTCCATGTTGTCTaGGCGAAAGAATTCATAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSGLHVV*AKEFIV Trigger: AACTATGAATTCTTTCGCCCAGACAACATGGAGGCC...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | CTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCAAACTGCAGAATCAATaGTCGTCGTTCTCTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LLQTYSLEVGHTQAKARVKLQNQ*SSFSGS Trigger: ACTACCAGAGAACGACGATCATTGATTCTGCAGTTT...GACTCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAACCAAAGGCTGGTAGTTaGTCTCATAGCACTCAATTC | + |
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Preference number: 4 (lower is better) Translates to: VWELLQTYSLEVGHTQAKPKAGS*SHSTQF Trigger: GAATTGAGTGCTATGAGATCAACTACCAGCCTTTGG...TTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCATGTTCTTTAGCAAACTaGAGAATCAATGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: EVGHTQAKARVCLRRTRPCSLAN*RINDRR Trigger: ACGACGATCATTGATTCTGCAGTTTGCTAAAGAACA...TGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | AGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTACCAGTACATTTTCTTaGCGTTCTAGCTCCATTATA | + |
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Preference number: 4 (lower is better) Translates to: RAHSGQSQSLLKENKASSTSTFS*RSSSII Trigger: TATAATGGAGCTAGAACGGCAAGAAAATGTACTGGT...ACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAACCAGTACATTTTCTTaGCGTTCTAGCTCCATTATA | + |
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Preference number: 4 (lower is better) Translates to: EVGHTQAKARVCLRRTRPTSTFS*RSSSII Trigger: TATAATGGAGCTAGAACGGCAAGAAAATGTACTGGT...TGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | CTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCGCCTCTCGTCGATACTaGCCTAAATTAAACACTTTA | + |
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Preference number: 4 (lower is better) Translates to: LLQTYSLEVGHTQAKARVASRRY*PKLNTL Trigger: TAAAGTGTTTAATTTAGGTCAGTATCGACGAGAGGC...GACTCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR TCA 90 bp | GTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAAAACTGCAGAATCAATaGTCGTCGTTCTCTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VWELLQTYSLEVGHTQAKKLQNQ*SSFSGS Trigger: ACTACCAGAGAACGACGATCATTGATTCTGCAGTTT...TTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | CCTGTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCTTCTGCAATGATGTCTaGGTCATTACAAATAGACTC | + |
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Preference number: 4 (lower is better) Translates to: PVWELLQTYSLEVGHTQAFCNDV*VITNRL Trigger: GAGTCTATTTGTAATGACCCAGACATCATTGCAGAA...GGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR GCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCTGTTCTTTAGCAAACTaGAGAATCAATGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSCSLAN*RINDRR Trigger: ACGACGATCATTGATTCTGCAGTTTGCTAAAGAACA...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CCA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCTTCTGCAATGATGTCTaGGTCATTACAAATAGACTC | + |
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Preference number: 4 (lower is better) Translates to: LGAATNLFSGGRAHSGQSFCNDV*VITNRL Trigger: GAGTCTATTTGTAATGACCCAGACATCATTGCAGAA...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS CCA 90 bp | GGAGGAGCCCCTTCGCCGCTGCAGCAGGCTGCTACTGCTGCTATGTaGAATCCAGATCTTCTGCAACCTGGTTTGAGTGAGTTCTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: GGAPSPLQQAATAAM*NPDLLQPGLSEFSH Trigger: ATGGGAGAACTCACTCAAACCAGGTTGCAGAAGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGGGGCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | GGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAGCAGTTAGTTGGGCCTCCATGTaGTCTGGGCGAAAGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: GHTQAKARVCLRRTRPAVSWASM*SGRKNS Trigger: TGAATTCTTTCGCCCAGACAACATGGAGGCCCAACT...AACTGCTGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | GAGGTAGGGCACACTCAGGCCAAAGCCAGAGTCTGCTTAAGGAGAACAAGGCCAAGTTGGGCCTCCATGTaGTCTGGGCGAAAGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: EVGHTQAKARVCLRRTRPSWASM*SGRKNS Trigger: TGAATTCTTTCGCCCAGACAACATGGAGGCCCAACT...TGGCCTTGTTCTCCTTAAGCAGACTCTGGCTTTGGCCTGAGTGTGCCCTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | CCTGTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCCTGCTTCCTGATAAGTaGGGCCTCCATGTTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PVWELLQTYSLEVGHTQALLPDK*GLHVVW Trigger: CCAGACAACATGGAGGCCCAACTTATCAGGAAGCAG...GGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | GAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGACTGCTTCCTGATAAGTaGGGCCTCCATGTTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ELLQTYSLEVGHTQAKARLLPDK*GLHVVW Trigger: CCAGACAACATGGAGGCCCAACTTATCAGGAAGCAG...TCTGGCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCAGGGAGCTGATGCTTaGAGACCGAATGAAGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: LGAATNLFSGGRAHSGQSQGADA*RPNEVG Trigger: GCCAACTTCATTCGGTCTCAAAGCATCAGCTCCCTG...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCGCCACAGGTGTGAGTTaGAGCACTGTATGCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LGAATNLFSGGRAHSGQSATGVS*STVCRG Trigger: TCCTCTGCATACAGTGCTCAAACTCACACCTGTGGC...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS-3UTR CAA 90 bp | GTTTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCACAGGTGTGAGTTaGAGCACTGTATGCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: VWELLQTYSLEVGHTQAKATGVS*STVCRG Trigger: TCCTCTGCATACAGTGCTCAAACTCACACCTGTGGC...TTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS GCA 90 bp | CGGCTGAGATACTTATGGACATCCTTTAGGGCTGCTAGAGCACACTaGTTCCTGATAAGTTGGGCCTCCATGTTGTCTGGGCGAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RLRYLWTSFRAARAH*FLISWASMLSGRKN Trigger: ATTCTTTCGCCCAGACAACATGGAGGCCCAACTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAAGTATCTCAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 ENSMUST00000153221.8 |
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| CDS-3UTR CAA 90 bp | TTGGGAGCTGCTACAAACTTATTCTCTGGAGGTAGGGCACACTCAGGCCAAAGCCCGAGTTTCACTTGCTaGATGTTTTCTGCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: LGAATNLFSGGRAHSGQSPSFTC*MFSAMM Trigger: CATCATTGCAGAAAACATCAAGCAAGTGAAACTCGG...GCTTTGGCCTGAGTGTGCCCTACCTCCAGAGAATAAGTTTGTAGCAGCTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS CCA 90 bp | AGGACTGCCGAGTTTCACTTGCTTGATGTTTTCTGCAATGATGTCTaGGTCATTACAAATAGACTCAATAAAGAAGACCTTGTAACCATG | + |
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Preference number: 5 (lower is better) Translates to: RTAEFHLLDVFCNDV*VITNRLNKEDLVTM Trigger: CATGGTTACAAGGTCTTCTTTATTGAGTCTATTTGTAATGACCCAGACATCATTGCAGAAAACATCAAGCAAGTGAAACTCGGCAGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 ENSMUST00000153221.8 |
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| CDS GCA 72 bp | TGGAGGAGCCCCTTCGCCGCTGCAGCAGGCTGCTACTaGTGCTATGTGGAATCCAGATCTTCTGCAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: WRSPFAAAAGCY*CYVESRSSATW Trigger: CCAGGTTGCAGAAGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGGGGCTCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS GCA 72 bp | GTGGTATGGAGGAGCCCCTTCGCCGCTGCAGCAGGCTaGTACTGCTGCTATGTGGAATCCAGATCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VVWRSPFAAAAG*YCCYVESRSSA Trigger: TGCAGAAGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGGGGCTCCTCCATACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS GCA 72 bp | AGGAGCCCCTTCGCCGCTGCAGCAGGCTGCTACTGCTaGTATGTGGAATCCAGATCTTCTGCAACCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RSPFAAAAGCYC*YVESRSSATWF Trigger: AAACCAGGTTGCAGAAGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGGGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS GCA 72 bp | TTAGTGAACTGTGGTATGGAGGAGCCCCTTCGCCGCTaGAGCAGGCTGCTACTGCTGCTATGTGGAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVNCGMEEPLRR*SRLLLLLCGIQ Trigger: CTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGGGGCTCCTCCATACCACAGTTCACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS CCA 72 bp | CACCATGATCACCATTGTGGGGGAATTAGTGAACTGTaGTATGGAGGAGCCCCTTCGCCGCTGCAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: HHDHHCGGISEL*YGGAPSPLQQA Trigger: AGCCTGCTGCAGCGGCGAAGGGGCTCCTCCATACCACAGTTCACTAATTCCCCCACAATGGTGATCATGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS CCA 72 bp | CCTTCGCCGCTGCAGCAGGCTGCTACTGCTGCTATGTaGAATCCAGATCTTCTGCAACCTGGTTTGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSPLQQAATAAM*NPDLLQPGLSE Trigger: CTCACTCAAACCAGGTTGCAGAAGATCTGGATTCCACATAGCAGCAGTAGCAGCCTGCTGCAGCGGCGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112713.3 |
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| CDS CAA 72 bp | CATGTGGCTAGTCCACACCTTCAGGGAGCTGATGCTTaGAGACCGAATGAAGTTGGCCAGGGCATAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: HVASPHLQGADA*RPNEVGQGIGI Trigger: TATGCCTATGCCCTGGCCAACTTCATTCGGTCTCAAAGCATCAGCTCCCTGAAGGTGTGGACTAGCCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 |
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| CDS TCA 72 bp | TGGCATCAAAAACCGCAACGTGACCTTCCTCACGGCTaGGATACTTATGGACATCCTTTAGGGCTGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: WHQKPQRDLPHG*DTYGHPLGLLE Trigger: CTCTAGCAGCCCTAAAGGATGTCCATAAGTATCTCAGCCGTGAGGAAGGTCACGTTGCGGTTTTTGATGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 ENSMUST00000153221.8 |
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| CDS GCA 72 bp | TACTTATGGACATCCTTTAGGGCTGCTAGAGCACACTaGTTCCTGATAAGTTGGGCCTCCATGTTGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: YLWTSFRAARAH*FLISWASMLSG Trigger: CCCAGACAACATGGAGGCCCAACTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 ENSMUST00000153221.8 |
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| CDS CCA 72 bp | GAGTTTCACTTGCTTGATGTTTTCTGCAATGATGTCTaGGTCATTACAAATAGACTCAATAAAGAAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: EFHLLDVFCNDV*VITNRLNKEDL Trigger: AAGGTCTTCTTTATTGAGTCTATTTGTAATGACCCAGACATCATTGCAGAAAACATCAAGCAAGTGAAACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080884.11 ENSMUST00000112713.3 ENSMUST00000153221.8 |
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