Pregenerated sensors for PFDN4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052033

Ensembl transcript IDs: ENSMUST00000063682.12, ENSMUST00000075087.8, ENSMUST00000109148.8, ENSMUST00000136839.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCAAATTTCGCGTATAGCTGCACCTTCAGGTCGGCTAACACCCGCTaGATGGACGCCACTCTGGACTCTAAGGCATCAATCTCTTCTTGC	+
Preference number: 5 (lower is better) Translates to: PNFAYSCTFRSANTR*MDATLDSKASISSC Trigger: GCAAGAAGAGATTGATGCCTTAGAGTCCAGAGTGGCGTCCATCCAGCGGGTGTTAGCCGACCTGAAGGTGCAGCTATACGCGAAATTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063682.12 ENSMUST00000075087.8 ENSMUST00000109148.8 ENSMUST00000136839.2
CDS CCA 72 bp	GCGTATAGCTGCACCTTCAGGTCGGCTAACACCCGCTaGATGGACGCCACTCTGGACTCTAAGGCATCAATC	+
Preference number: 6 (lower is better) Translates to: AYSCTFRSANTR*MDATLDSKASI Trigger: GATTGATGCCTTAGAGTCCAGAGTGGCGTCCATCCAGCGGGTGTTAGCCGACCTGAAGGTGCAGCTATACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063682.12 ENSMUST00000075087.8 ENSMUST00000109148.8 ENSMUST00000136839.2
CDS CCA 72 bp	ATAGCTGCACCTTCAGGTCGGCTAACACCCGCTGGATaGACGCCACTCTGGACTCTAAGGCATCAATCTCTT	+
Preference number: 6 (lower is better) Translates to: IAAPSGRLTPAG*TPLWTLRHQSL Trigger: AAGAGATTGATGCCTTAGAGTCCAGAGTGGCGTCCATCCAGCGGGTGTTAGCCGACCTGAAGGTGCAGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063682.12 ENSMUST00000075087.8 ENSMUST00000109148.8 ENSMUST00000136839.2

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