Pregenerated sensors for PFAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020899Ensembl transcript IDs: ENSMUST00000021282.12, ENSMUST00000149703.4, ENSMUST00000152964.3
Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGCAGTAGTCGCACATGCCTTAACCCCAGCACTCAGATGGATCTCTaGGTGCGAGGCCAGCCGGTCTACAACATAAGTTCCAGGACAGCC | + |
Preference number: 1 (lower is better) Translates to: GSSRTCLNPSTQMDL*VRGQPVYNISSRTA Trigger: GGCTGTCCTGGAACTTATGTTGTAGACCGGCTGGCCTCGCACTCAGAGATCCATCTGAGTGCTGGGGTTAAGGCATGTGCGACTACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR TCA 90 bp | ATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTaGTGTACATTATTCCTAGACCCTAAGCCAATGCCAAGCGCCTTG | + |
Preference number: 1 (lower is better) Translates to: IRKAALFSWAEAGRD*CTLFLDPKPMPSAL Trigger: CAAGGCGCTTGGCATTGGCTTAGGGTCTAGGAATAATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 90 bp | TTCCTAACAACTAGCAGTGCATGTCTGAAAAGGGATCCGGAAAGCTaGTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACATT | + |
Preference number: 1 (lower is better) Translates to: FLTTSSACLKRDPES*SFQLGRGWEGLMYI Trigger: AATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATCCCTTTTCAGACATGCACTGCTAGTTGTTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 90 bp | AGCCTGGAACTCACTAGGCTGGCCTTGAACTTACAAAGATCCACCTaGCCCTATCTCCTAAGTGTTGGGATAAAAGGCATGTACCACCAT | + |
Preference number: 1 (lower is better) Translates to: SLELTRLALNLQRST*PYLLSVGIKGMYHH Trigger: ATGGTGGTACATGCCTTTTATCCCAACACTTAGGAGATAGGGGCAGGTGGATCTTTGTAAGTTCAAGGCCAGCCTAGTGAGTTCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 90 bp | ACATACAACCTGCAGCTTAACACCTATTCACCATTAGTACCTTCTTaGGGTGCTACTTCTGCAGAAGCACAAGTGTTCTGCATTCCCCCA | + |
Preference number: 1 (lower is better) Translates to: TYNLQLNTYSPLVPS*GATSAEAQVFCIPP Trigger: TGGGGGAATGCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAGGTGTTAAGCTGCAGGTTGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 90 bp | ATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATaGTACTTAGGTCAGAACACAGCACTTGGTAGAAGACCAGGATTT | + |
Preference number: 1 (lower is better) Translates to: IYSSTASKGMFTCPK*YLGQNTALGRRPGF Trigger: AAATCCTGGTCTTCTACCAAGTGCTGTGTTCTGACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAACGGAGTCAAAGGGTaGGCTGTGGGCCAGGGTGGT | + |
Preference number: 2 (lower is better) Translates to: RASLGYRLKADLTKPKKTNGVKG*AVGQGG Trigger: ACCACCCTGGCCCACAGCTCACCCTTTGACTCCGTT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTCTGCCCACCCCTCTaGCTGTCAGCTGTCCTCGGA | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILCPPL*LSAVLG Trigger: TCCGAGGACAGCTGACAGGCAGAGGGGTGGGCAGAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCACATGGGATACTCCTaGAAGCAATGGGGAAAGAAG | + |
Preference number: 2 (lower is better) Translates to: RASLGYRLKADLTKPKKTHMGYS*KQWGKK Trigger: CTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGGGGCAAGGCTAAAATaGGCAATGCAGCTGAGGTCA | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIGARLK*AMQLRS Trigger: TGACCTCAGCTGCATTGCTCATTTTAGCCTTGCCCC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTGGTTCTTGCTAAGATaGTTTTGGAAATCACATGGG | + |
Preference number: 2 (lower is better) Translates to: DPESCSFQLGRGWEGLMYWFLLR*FWKSHG Trigger: CCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGCTGAAAGCAGCTCTTaGAGGGGCAAGGCTAAAATG | + |
Preference number: 2 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIAESSS*RGKAKM Trigger: CATTTTAGCCTTGCCCCTGCAAGAGCTGCTTTCAGC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGCTCCAGGGCTCTCTaGTCTAAGAAGGAAGGTATC | + |
Preference number: 2 (lower is better) Translates to: DVAGWVGRLAVHFKLEPISSRAL*SKKEGI Trigger: GATACCTTCCTTCTTAGAGCAGAGAGCCCTGGAGCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGTTAAACTCAAGAGCTaGAAGCAGCTCTTGCAGGGG | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIVKLKS*KQLLQG Trigger: CCCCTGCAAGAGCTGCTTTCAGCTCTTGAGTTTAAC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGACAGGCAGATGTAGCTaGGTGGGTAGGGCGCCTTGC | + |
Preference number: 2 (lower is better) Translates to: GNQTQETQILGKCSNTQMTGRCS*VGRAPC Trigger: GCAAGGCGCCCTACCCACCCAGCTACATCTGCCTGT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTGGGGTGCTACTTCTaGAGAAGCACAAGTGTTCTG | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILGCYF*RSTSVL Trigger: CAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGGCAGATGTAGCTGGGTaGGTAGGGCGCCTTGCTGTT | + |
Preference number: 2 (lower is better) Translates to: GNQTQETQILGKCSNTQMADVAG*VGRLAV Trigger: AACAGCAAGGCGCCCTACCCACCCAGCTACATCTGC...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCAAGAATCAGGAATGTaGTCTGAGATAGGCACAGGT | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIQESGM*SEIGTG Trigger: ACCTGTGCCTATCTCAGATCACATTCCTGATTCTTG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTGCCAGTAAATCTCTaGCCACCCCTCTGCCTGTCA | + |
Preference number: 2 (lower is better) Translates to: GNQTQETQILGKCSNTQMLPVNL*PPLCLS Trigger: TGACAGGCAGAGGGGTGGGCAGAGATTTACTGGCAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGTCATCCCAGCATTTTaGTTCTTGCTAAGATGCTTT | + |
Preference number: 2 (lower is better) Translates to: RASLGYRLKADLTKPKKTVIPAF*FLLRCF Trigger: AAAGCATCTTAGCAAGAACCAAAATGCTGGGATGAC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTTTTGGAAATCACATaGGATACTCCTGAAAGCAAT | + |
Preference number: 2 (lower is better) Translates to: RASLGYRLKADLTKPKKTLLEIT*DTPESN Trigger: ATTGCTTTCAGGAGTATCCCATGTGATTTCCAAAAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACAATGCCAAGCGCCTTaGCAACTCACCCGGGGTAAC | + |
Preference number: 2 (lower is better) Translates to: TSALSHLAYSGLQKYFHKQCQAP*QLTRGN Trigger: GTTACCCCGGGTGAGTTGCCAAGGCGCTTGGCATTG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTGCTAAGATGCTTTTaGAAATCACATGGGATACTC | + |
Preference number: 2 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILLRCF*KSHGIL Trigger: GAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CAA 90 bp | GCAGATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTaGGAACCAATCATAGACAGTTTATCACTAAACTTTGCTTTGTTA | + |
Preference number: 2 (lower is better) Translates to: ADVAGWVGRLAVHFK*EPIIDSLSLNFALL Trigger: TAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAAGAAAACGAGGATGTaGGAGCTCACTCAGAGCTCT | + |
Preference number: 2 (lower is better) Translates to: YSSTASKGMFTCPKWYLGKKTRM*ELTQSS Trigger: AGAGCTCTGAGTGAGCTCTCACATCCTCGTTTTCTT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGAAGCACAAGTGTTCTaGATTCCCCCAAACCCTGAA | + |
Preference number: 2 (lower is better) Translates to: YSSTASKGMFTCPKWYLGEAQVF*IPPNPE Trigger: TTCAGGGTTTGGGGGAATGCAGAACACTTGTGCTTC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTATCAGGAATGTGATCTaGGATAGGCACAGGTCAGCG | + |
Preference number: 2 (lower is better) Translates to: QFITKLCFVNWETPLKYLIRNVI*DRHRSA Trigger: CGCTGACCTGTGCCTATCTCAGATCACATTCCTGAT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR GCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGTACCTTCTTGGGGTaGTACTTCTGCAGAAGCACA | + |
Preference number: 2 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLSTFLG*YFCRST Trigger: TGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAATATCTTCCTTTGGTaGTGCTGGACGGGAATCAAA | + |
Preference number: 2 (lower is better) Translates to: YSSTASKGMFTCPKWYLGNIFLW*CWTGIK Trigger: TTTGATTCCCGTCCAGCACCACCAAAGGAAGATATT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAAACGGAGAAAGATCTaGCTTCCCATCTCCAAATAT | + |
Preference number: 2 (lower is better) Translates to: YSSTASKGMFTCPKWYLGKRRKI*LPISKY Trigger: ATATTTGGAGATGGGAAGTCAGATCTTTCTCCGTTT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR TCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAACCCAACCCTGTCTTaGAAAGCCAAAACAACAAAA | + |
Preference number: 2 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLNPTLS*KAKTTK Trigger: TTTTGTTGTTTTGGCTTTTCAAGACAGGGTTGGGTT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACTTTGCTTTGTTAACTaGGAAACACCTCTCAAATAC | + |
Preference number: 2 (lower is better) Translates to: TSALSHLAYSGLQKYFHKLCFVN*ETPLKY Trigger: GTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | ACTAGCAGTGCATGTCTGAAAAGGGATCCGGAAAGCTaGTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTG | + |
Preference number: 3 (lower is better) Translates to: TSSACLKRDPES*SFQLGRGWEGL Trigger: CAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATCCCTTTTCAGACATGCACTGCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR TCA 72 bp | GCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTaGTGTACATTATTCCTAGACCCTAAGCCAATGCCA | + |
Preference number: 3 (lower is better) Translates to: AALFSWAEAGRD*CTLFLDPKPMP Trigger: TGGCATTGGCTTAGGGTCTAGGAATAATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR TCA 72 bp | AAGGTGGCTGTCGGTACAACAGCTACTACCAAGACGTaGTCTGTGACTGCAGGATCTTCACAGGCAGATGTA | + |
Preference number: 3 (lower is better) Translates to: KVAVGTTATTKT*SVTAGSSQADV Trigger: TACATCTGCCTGTGAAGATCCTGCAGTCACAGATCACGTCTTGGTAGTAGCTGTTGTACCGACAGCCACCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | CTATTCACCATTAGTACCTTCTTGGGGTGCTACTTCTaGAGAAGCACAAGTGTTCTGCATTCCCCCAAACCC | + |
Preference number: 3 (lower is better) Translates to: LFTISTFLGCYF*RSTSVLHSPKP Trigger: GGGTTTGGGGGAATGCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | AGATCCATGTTAAACTCAAGAGCTGAAAGCAGCTCTTaGAGGGGCAAGGCTAAAATGAGCAATGCAGCTGAG | + |
Preference number: 3 (lower is better) Translates to: RSMLNSRAESSS*RGKAKMSNAAE Trigger: CTCAGCTGCATTGCTCATTTTAGCCTTGCCCCTGCAAGAGCTGCTTTCAGCTCTTGAGTTTAACATGGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 72 bp | CTGCAGCTTAACACCTATTCACCATTAGTACCTTCTTaGGGTGCTACTTCTGCAGAAGCACAAGTGTTCTGC | + |
Preference number: 3 (lower is better) Translates to: LQLNTYSPLVPS*GATSAEAQVFC Trigger: GCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAGGTGTTAAGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | TCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTaGTGGACGGGAATCAAACTCAGGAAACACAGATAC | + |
Preference number: 3 (lower is better) Translates to: SDFPSPNIFLWW*WTGIKLRKHRY Trigger: GTATCTGTGTTTCCTGAGTTTGATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 72 bp | GAAAGATCTGACTTCCCATCTCCAAATATCTTCCTTTaGTGGTGCTGGACGGGAATCAAACTCAGGAAACAC | + |
Preference number: 3 (lower is better) Translates to: ERSDFPSPNIFL*WCWTGIKLRKH Trigger: GTGTTTCCTGAGTTTGATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CAA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTTGCTAAGATGCTTTaGGAAATCACATGGGATACT | + |
Preference number: 3 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILAKML*EITWDT Trigger: AGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR TCA 72 bp | AAAGCCGATCTCACAAAGCCAAAGAAAACGAGGATGTaGGAGCTCACTCAGAGCTCTAACCAAGAGAATGAA | + |
Preference number: 3 (lower is better) Translates to: KADLTKPKKTRM*ELTQSSNQENE Trigger: TTCATTCTCTTGGTTAGAGCTCTGAGTGAGCTCTCACATCCTCGTTTTCTTTGGCTTTGTGAGATCGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | GCTGAGGTCATCCCAGCATTTTGGTTCTTGCTAAGATaGTTTTGGAAATCACATGGGATACTCCTGAAAGCA | + |
Preference number: 3 (lower is better) Translates to: AEVIPAFWFLLR*FWKSHGILLKA Trigger: TGCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAATGCTGGGATGACCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 72 bp | TCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATaGTACTTAGGTCAGAACACAGCACTTGGTAGAAGA | + |
Preference number: 3 (lower is better) Translates to: STASKGMFTCPK*YLGQNTALGRR Trigger: TCTTCTACCAAGTGCTGTGTTCTGACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CCA 72 bp | CTCAGCTATGAGTTCAAAGCCAGCCAGAACATCATATaGGTCTCGAAAATACAAACAAAATCCTTAGAATCA | + |
Preference number: 3 (lower is better) Translates to: LSYEFKASQNII*VSKIQTKSLES Trigger: TGATTCTAAGGATTTTGTTTGTATTTTCGAGACCCATATGATGTTCTGGCTGGCTTTGAACTCATAGCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR-3UTR CAA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAAAACCCAACCCTGTCTaGAAAAGCCAAAACAACAAA | + |
Preference number: 3 (lower is better) Translates to: TSALSHLAYSGLQKYFHKKPNPV*KSQNNK Trigger: TTTGTTGTTTTGGCTTTTCAAGACAGGGTTGGGTTT...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR GCA 72 bp | GTTGGAACCAATCATAGACAGTTTATCACTAAACTTTaGTTTGTTAACTGGGAAACACCTCTCAAATACCTT | + |
Preference number: 3 (lower is better) Translates to: VGTNHRQFITKL*FVNWETPLKYL Trigger: AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCACGGCCTGTGCACTaGACGTCTCTGATGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYPRPVH*TSLMRP Trigger: TGGCCGCATCAGAGACGTCCAGTGCACAGGCCGTGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYSGSPR*TAPKSR Trigger: CCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGC | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYSARGV*RGPTHC Trigger: GCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGCCCACAAAACAAGCTaGGCAGCGTTCCCGGGCACT | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYAHKTS*AAFPGT Trigger: AGTGCCCGGGAACGCTGCCCAGCTTGTTTTGTGGGC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTGTCGATGGAGCCCTTaGGTGGGGCTGGAATGCTCT | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYCRWSP*VGLECS Trigger: AGAGCATTCCAGCCCCACTCAAGGGCTCCATCGACA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCCCACCAGGATGTTTaGGGTCTGGGGTCACAGTGG | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYSHQDV*GLGSQW Trigger: CCACTGTGACCCCAGACCTCAAACATCCTGGTGGGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTC | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTYTRPG*RCPAAF Trigger: GAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCC | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYSWEKH*ARAVPP Trigger: GGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGA | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYGCSPS*EKHWAR Trigger: TCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGTTCCTCCCAGCCGGTaGTGCCCGGGGCTCAAAGGC | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRVPPSR*CPGLKG Trigger: GCCTTTGAGCCCCGGGCAGCACCGGCTGGGAGGAAC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCAGCAGCTGTCCTCCTaGGTCCAGTTCCTAGCATTG | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYQQLSS*VQFLAL Trigger: CAATGCTAGGAACTGGACCCAGGAGGACAGCTGCTG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGCTCTTGACTGGCTaGTCTCCCAGGGCTGTGGCA | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTRLLTG*SPRAVA Trigger: TGCCACAGCCCTGGGAGAGCAGCCAGTCAAGAGCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGAGCCCAGGACGTCTaGGTAGCTGAAGCCGCCCAC | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIRAQDV*VAEAAH Trigger: GTGGGCGGCTTCAGCTACGCAGACGTCCTGGGCTCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGC | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIGRHAH*QSLTAR Trigger: GCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCATCGCTGACATCATaGCCTGAGCAAAGACGGCAT | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYPSLTS*PEQRRH Trigger: ATGCCGTCTTTGCTCAGGCCATGATGTCAGCGATGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCCTGTGGCAGCCCCTATaGACTCCTGGTGGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPILWQPL*TPGGSV Trigger: CACTGAGCCACCAGGAGTGCATAGGGGCTGCCACAG...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCATCCACATGGAGCTaGCCCTTGAAGAACCAATGT | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYPSTWS*PLKNQC Trigger: ACATTGGTTCTTCAAGGGCCAGCTCCATGTGGATGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTTCTTCCCATCCACATaGAGCTGGCCCTTGAAGAAC | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYFFPST*SWPLKN Trigger: GTTCTTCAAGGGCCAGCTCCATGTGGATGGGAAGAA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCAGGTCTACAGGGGTTaGAGGTGTCAGGGGTGCATC | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTQVYRG*RCQGCI Trigger: GATGCACCCCTGACACCTCCAACCCCTGTAGACCTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCCAGACACAGCAAGCCTaGCAGCAGCCTTGGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIQTQQA*QQPWGP Trigger: TGGACCCCAAGGCTGCTGCCAGGCTTGCTGTGTCTG...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCGCTGCACCCTCACCTaGGAGCTTGGCTGCCCACAT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRRCTLT*ELGCPH Trigger: ATGTGGGCAGCCAAGCTCCCAGGTGAGGGTGCAGCG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRPASPV*PSSRHR Trigger: ACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCCTCTTCTCGCAAGATaGCAACTCGAGGGACGGGTC | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTPLLAR*QLEGRV Trigger: GACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGGTGTCGGCCATCTTaGGAACAGATACCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: DPESCSFQLGRGWEGLMYRCRPS*EQIPAM Trigger: CATAGCTGGTATCTGTTCCCAAGATGGCCGACACCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGACAAGCCAGGGCTCCTaGGCAACATCATCCCGCACC | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRTSQGS*ATSSRT Trigger: GGTGCGGGATGATGTTGCTCAGGAGCCCTGGCTTGT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGGAATGTGTCCAACCTaGTGGCCCCAGAGCAGAGAT | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTGMCPT*WPQSRD Trigger: ATCTCTGCTCTGGGGCCATCAGGTTGGACACATTCC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTTGTCTCCCTGGACCTaGACAGACGAAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTLSPWT*TDEAAP Trigger: TGGAGCTGCTTCGTCTGTGCAGGTCCAGGGAGACAA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTCCTGGTGGCTCAGTaGTACAACAGCCACATCAGC | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTLLVAQ*YNSHIS Trigger: GCTGATGTGGCTGTTGTAGCACTGAGCCACCAGGAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTCAGCCCGGCTGCCTaGCACACAGAAACAATGTTG | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTLSPAA*HTETML Trigger: CAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCAGCCCCTGCTGTTGCTaGAAGCAGCTTGGGCGGGTA | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGISPCCC*KQLGRV Trigger: TACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCT...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGGGGCCACTCCTGTaGGGAAGTTATGTGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTRGPLL*GSYVSL Trigger: CAGAGACACATAACTTCCCCACAGGAGTGGCCCCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGTTGGCTGGGAGTCCTaGCCTGGCTCAGCTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRVGWES*PGSACS Trigger: AGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAAC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPISGWCK*WLLLGH Trigger: GTGACCCAGAAGGAGCCATCATTTACACCAGCCGCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCATCTCGGAGGTCGGTaGCCAGAGCAAACACCAGGT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRHLGGR*PEQTPG Trigger: ACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCAGCATATGCTGAAATaGCCAGTGACCCAGGAGCCT | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTQHMLK*PVTQEP Trigger: AGGCTCCTGGGTCACTGGTCATTTCAGCATATGCTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGACCTGGGAGCTTGGCTaGCCACATCCAGTTCCCACT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRTWELG*PHPVPT Trigger: AGTGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCCAGAGCAGAGATCTTaGATGGTCACATCCCACACC | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTPEQRS*MVTSHT Trigger: GGTGTGGGATGTGACCATGCAAGATCTCTGCTCTGG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGCCCTTGAGTGGGGCTaGAATGCTCTGAGGAGAGAA | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIALEWG*NALRRE Trigger: TTCTCTCCTCAGAGCATTCCAGCCCCACTCAAGGGC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTGGGAGTCCTGGCCTaGCTCAGCTTGCTCTTCACT | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILGVLA*LSLLFT Trigger: AGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCAAACACCAGGTTGGTaGGGGCCTCAGACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIQTPGW*GPQTQQ Trigger: TTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGTTAGGGTTGGAGGATaGCTGAGTGCTCATGATGGA | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTVRVGG*LSAHDG Trigger: TCCATCATGAGCACTCAGGCATCCTCCAACCCTAAC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGACATGTCTAAGCCCCTaGTGTTGCTGGAAGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTTCLSP*CCWKQL Trigger: AAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGGGTTCAGAGGGTACTaGTCTGTGGGGTTCCCATCA | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRGFRGY*SVGFPS Trigger: TGATGGGAACCCCACAGAGCAGTACCCTCTGAACCC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPISRNSA*VPPPAT Trigger: TGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTCCATGCCTGGCTCTaGGGGCTTTTTGCCTACATG | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGILHAWL*GLFAYM Trigger: CATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCCTATGCACTCCTGGTaGCTCAGTGCTACAACAGCC | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRPMHSW*LSATTA Trigger: GGCTGTTGTAGCACTGAGCCACCAGGAGTGCATAGG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGATGTTTGAGGTCTaGGGTCACAGTGGCTGTGAT | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTRMFEV*GHSGCD Trigger: ATCACAGCCACTGTGACCCCAGACCTCAAACATCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTAC | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMSEHQG*PRLHTY Trigger: GTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CAA 72 bp | AGTGTCCTGACTAGCCTGGAACTCACTAGGCTGGCCTaGAACTTACAAAGATCCACCTGCCCCTATCTCCTA | + |
Preference number: 4 (lower is better) Translates to: SVLTSLELTRLA*NLQRSTCPYLL Trigger: TAGGAGATAGGGGCAGGTGGATCTTTGTAAGTTCAAGGCCAGCCTAGTGAGTTCCAGGCTAGTCAGGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCA | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRGLEDA*VLMMDS Trigger: TGAATCCATCATGAGCACTCAGGCATCCTCCAACCC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTTAGGACATTGCCATTaGCACCAGCACCCTGGTCAT | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPILGHCH*HQHPGH Trigger: ATGACCAGGGTGCTGGTGGCAATGGCAATGTCCTAA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGCTCCTTTAGGACATTaGCATTGCCACCAGCACCCT | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIAPLGH*HCHQHP Trigger: AGGGTGCTGGTGGCAATGGCAATGTCCTAAAGGAGC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCAT | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIFATIY*HTQCCH Trigger: ATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAGTGCCAGCTACCACGTaGGCCCCACGGCCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKVPATT*APRPVH Trigger: GTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCAC...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESIRAMA*GPASPV Trigger: CACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAAT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCAT | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGPGQPC*GSLCHH Trigger: ATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTTTCTTCCCCTGGATTaGACTGCTGTTGTCACAGAA | + |
Preference number: 4 (lower is better) Translates to: RASLGYRLKADLTKPKKTFLPLD*TAVVTE Trigger: TTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCACACGATTCATCTTTTaGTCCATTTCCGGGTCTCCC | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPITRFIF*SISGSP Trigger: GGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGA | + |
Preference number: 4 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIFLGLH*CPLLAR Trigger: TCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCTGTGGTTGCACCGCTaGAGGGGGCCACTCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLLWLHR*RGPLLW Trigger: CCACAGGAGTGGCCCCCTTCAGCGGTGCAACCACAG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAG | + |
Preference number: 4 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIFSCLQ*LCPQNK Trigger: CTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGTCCAGCAGGCTCTTaGCTGGCTGCTCTCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLGPAGS*LAALPG Trigger: CCCTGGGAGAGCAGCCAGTCAAGAGCCTGCTGGACC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGAGAAGAGCCAGCAGCTaGCAGCCATTACACACGCCC | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMRRASS*QPLHTP Trigger: GGGCGTGTGTAATGGCTGTCAGCTGCTGGCTCTTCT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAACACGTCCAGATGCTaGCCCCTCATGGCCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESNTSRC*PLMARG Trigger: CCCTCTGGCCATGAGGGGGCAGCATCTGGACGTGTT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGTTCAGGAGAAGAAAATaGCATGTAGCCTTCCCCGTG | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRFRRRK*HVAFPV Trigger: CACGGGGAAGGCTACATGGCATTTTCTTCTCCTGAA...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKTARSG*GMSARC Trigger: ACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGT...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCCAGCACCCTGGTCATaGAGGCTGCAGATGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMPAPWS*RLQMGF Trigger: AAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCAGCAGGCTCTTGACTaGCTGCTCTCCCAGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGQQALD*LLSQGC Trigger: ACAGCCCTGGGAGAGCAGCCAGTCAAGAGCCTGCTG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGATGCCTGAGTGCTCATaGTGGATTCAAAGAGGGAAT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRMPECS*WIQRGN Trigger: ATTCCCTCTTTGAATCCATCATGAGCACTCAGGCAT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMSPWVI*KARTRF Trigger: GAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCCAGTGCTGCCATCACTaGCACCATAGCCTCACAGGC | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESQCCHH*HHSLTG Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTG...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCGATGGAGCCCTTGAGTaGGGCTGGAATGCTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESDGALE*GWNALR Trigger: CCTCAGAGCATTCCAGCCCCACTCAAGGGCTCCATC...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGTTTTGCCTACATGTTTaGCTTCCATGGACCCAATGC | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRFCLHV*LPWTQC Trigger: GCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAA...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCGCACACTCAGTTCTaGGGGCAAAGCCAAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMSHTQF*GQSQRL Trigger: CAGCCTTTGGCTTTGCCCCCAGAACTGAGTGTGCGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGC | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMLFPGL*IKGHRS Trigger: GCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGCCTCGATCTTGGCTTaGAGTTCAGGAGAAGAAAAT | + |
Preference number: 4 (lower is better) Translates to: ITWDTPESNGERRQRSQRASILA*SSGEEN Trigger: ATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCCGGCCGCAGGAATTTaGCTTTCTTCCCCTGGATTG | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGPAAGI*LSSPGL Trigger: CAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: QFITKLCFVNWETPLKYLSNSQQ*QLPRGP Trigger: GGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGTTCCCATCATCGTCTaGCCAGTGCAGAGGAACCAG | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGVPIIV*PVQRNQ Trigger: CTGGTTCCTCTGCACTGGGCAGACGATGATGGGAAC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAGACCTCCACTGTACTaGGGTTCCGCTGCAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESRPPLY*GSAAAL Trigger: AAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGCCCCTATGCACTCCTaGTGGCTCAGTGCTACAACA | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGAPMHS*WLSATT Trigger: TGTTGTAGCACTGAGCCACCAGGAGTGCATAGGGGC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTACCAGCTATGCCCCCTaGAGATCCATTGGGGTTCAG | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGTSYAP*RSIGVQ Trigger: CTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAGCAGCCACGGGGAGGTaGGAAGAACATCAAAGGGAG | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKAATGR*EEHQRE Trigger: CTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGC...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGGGCTGGAATGCTCTaGGGAGAGAAGCTCTGGATG | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLGAGML*GEKLWM Trigger: CATCCAGAGCTTCTCTCCTCAGAGCATTCCAGCCCC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACATGGAGCTGGCCCTTaGAGAACCAATGTCGGCTGT | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKHGAGP*RTNVGC Trigger: ACAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAGGAAGAACTCCTTCTaGGGCATCTTTCCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGRKNSF*GIFPST Trigger: GGTGCTGGGAAAGATGCCTCAGAAGGAGTTCTTCCT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLQRGSA*SRSSWK Trigger: TTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACTCGGTCTCCATTGCTaGCCTCTTCTCGCAAGATGG | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKLGLHC*PLLARW Trigger: CCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCCAAAGTCCAGGTCACTaGTGTTGTCTCCCTGGACCT | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESQSPGH*CCLPGP Trigger: AGGTCCAGGGAGACAACACCAGTGACCTGGACTTTG...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACCCCCAGATTTCCAGTaGATTCAAGGTTGGGTCACC | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKPPDFQ*IQGWVT Trigger: GGTGACCCAACCTTGAATGCACTGGAAATCTGGGGG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CAA 72 bp | GCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTaGGAACCAATCATAGACAGTTTATCACTAAACTTT | + |
Preference number: 4 (lower is better) Translates to: AGWVGRLAVHFK*EPIIDSLSLNF Trigger: AAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR TCA 90 bp | ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAATGCTCACTATTGGACTaGGCCAAGTCAAAGACCTCC | + |
Preference number: 4 (lower is better) Translates to: TSALSHLAYSGLQKYFHKCSLLD*AKSKTS Trigger: GGAGGTCTTTGACTTGGCTCAGTCCAATAGTGAGCA...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGTTGCCATAGTCAGATaGTCCATTGCTGGCCTCAAT | + |
Preference number: 4 (lower is better) Translates to: YSSTASKGMFTCPKWYLGVAIVR*SIAGLN Trigger: ATTGAGGCCAGCAATGGAGCATCTGACTATGGCAAC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCA | + |
Preference number: 4 (lower is better) Translates to: GNQTQETQILGKCSNTQMLTFFP*IALLLS Trigger: TGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAAGTTCCCAGGATACTaGAAGCTTGGGTCCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLKFPGY*KLGSSQ Trigger: CTGGGAGGACCCAAGCTTCCAGTATCCTGGGAACTT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTCCTTGGCCTCGATCTTaGCTTGGAGTTCAGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: QFITKLCFVNWETPLKYLPWPRS*LGVQEK Trigger: CTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGG...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTTGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCA | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLWKGLS*PVYIVA Trigger: TGCTACAATGTACACTGGGCAGCTGAGACCCTTCCA...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCGCTCTCCAAACTTGTTaGCATAGTCAGATGCTCCAT | + |
Preference number: 4 (lower is better) Translates to: ILVLAKMLLEITWDTPESALQTC*HSQMLH Trigger: ATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGC...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCAACCTCCAAAGGCCTaGCAAAGTTCCCAGGATACT | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLQPPKA*QSSQDT Trigger: AGTATCCTGGGAACTTTGCCAGGCCTTTGGAGGTTG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTAAATCCAGCCAGCACTaGCTCTCCAAACTTGTTGCC | + |
Preference number: 4 (lower is better) Translates to: QFITKLCFVNWETPLKYLKSSQH*LSKLVA Trigger: GGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR GCA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGATTCAAAGAGGGAATaGGCTAGCTTCTTCCCATCC | + |
Preference number: 4 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLDSKRE*ASFFPS Trigger: GGATGGGAAGAAGCTAGCGCATTCCCTCTTTGAATC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CCA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTGGGCAGATTATAATCTaGGATGTGCAGGTTTCCAAA | + |
Preference number: 4 (lower is better) Translates to: QFITKLCFVNWETPLKYLGQIII*DVQVSK Trigger: TTTGGAAACCTGCACATCCCAGATTATAATCTGCCC...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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3UTR CAA 72 bp | GAACCAATCATAGACAGTTTATCACTAAACTTTGCTTaGTTAACTGGGAAACACCTCTCAAATACCTTAATC | + |
Preference number: 4 (lower is better) Translates to: EPIIDSLSLNFA*LTGKHLSNTLI Trigger: GATTAAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | CCACACGGGCAGCACAGAGCCTTCCATCCCTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTACGGTGGCCCATCGGGACTCGAACCG | + |
Preference number: 5 (lower is better) Translates to: PHGQHRAFHPSEHQG*PRLHTYGGPSGLEP Trigger: CGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGGAAGGCTCTGTGCTGCCCGTGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | CCATCCCTCGGAGCATCAGGGCTGGCCCCGGCTCCACACGTACGGTaGCCCATCGGGACTCGAACCGCCCAGACAGATTGTGGCGGAGCA | + |
Preference number: 5 (lower is better) Translates to: PSLGASGLAPAPHVR*PIGTRTAQTDCGGA Trigger: TGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGGCCTaGCTCAGCTTGCTCTTCACTGGGATCACTTCCCACCCAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: VAEQEARLCWLGVLA*LSLLFTGITSHPAQ Trigger: CTGGGCTGGGTGGGAAGTGATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | ACACGTACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATTGTaGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGGCCT | + |
Preference number: 5 (lower is better) Translates to: TRTVAHRDSNRPDRL*RSRRPGCVGWESWP Trigger: AGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GGACGGGTCCACCAGGTTTACAGGGCACAGAGGCCACAGGAAAGGTaGGCGGCAGGTAGTAGCTGGGCCCTGTCCGCTCCTTCAGGCCCT | + |
Preference number: 5 (lower is better) Translates to: GRVHQVYRAQRPQER*AAGSSWALSAPSGP Trigger: AGGGCCTGAAGGAGCGGACAGGGCCCAGCTACTACCTGCCGCCCACCTTTCCTGTGGCCTCTGTGCCCTGTAAACCTGGTGGACCCGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 90 bp | ACCCAGGAGCCTGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTGCCA | + |
Preference number: 5 (lower is better) Translates to: TQEPAPSQCRPGQPC*GSLCHHLLPHPVLP Trigger: TGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCAGGCTCCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | AGCCCAGAAGAGCCAGCAGCTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTCGGAATCGGCCCAGCTCTTCCCTGG | + |
Preference number: 5 (lower is better) Translates to: SPEEPAADSHYTRPG*RCPAAFGIGPALPW Trigger: CCAGGGAAGAGCTGGGCCGATTCCGAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAGCTGCTGGCTCTTCTGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GAACCGCCCAGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTaGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTGGGATC | + |
Preference number: 5 (lower is better) Translates to: EPPRQIVAEQEARLC*LGVLAWLSLLFTGI Trigger: GATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | GCCGACCCGGGCAGCCATGCTGAGGGAGTCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCATCACTGCCACCATAGCCTCACAGGC | + |
Preference number: 5 (lower is better) Translates to: ADPGSHAEGVFATIY*HTQCCHHCHHSLTG Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | GGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: GEVGRTSKGEGRHAH*QSLTARSGCGMSAR Trigger: CCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | CAGCCACGGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATaGCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAG | + |
Preference number: 5 (lower is better) Translates to: QPRGGGKNIKGRGSP*PLPKPYSPLRVRHE Trigger: CTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGCCCGGGGCTCAAA | + |
Preference number: 5 (lower is better) Translates to: GRSRSGGCSPSWEKH*ARAVPPSRCCPGLK Trigger: TTTGAGCCCCGGGCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | GGTGTCCGGCCGCCTTCGGAATCGGCCCAGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGCTGCCCAACCTTTAGCAGAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: GVRPPSESAQLFPGL*IKGHRSCPTFSRAQ Trigger: CTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGATTCCGAAGGCGGCCGGACACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS-3UTR CAA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGGAGGCCCGGCTGTGTaGGCTGGGAGTCCTGGCCTG | + |
Preference number: 5 (lower is better) Translates to: DPESCSFQLGRGWEGLMYGGPAV*AGSPGL Trigger: CAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | TGCTGCCATCACTGCCACCATAGCCTCACAGGCATCAGCCAGCGCTaGACCCTCACCTGGGAGCTTGGCTGCCCACATCCAGTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: CCHHCHHSLTGISQR*TLTWELGCPHPVPT Trigger: AGTGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGTGAGGGTGCAGCGCTGGCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | TGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTaGCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATGCCCCC | + |
Preference number: 5 (lower is better) Translates to: CPLPKPYSPLRVRHE*QVSAILGTDTSYAP Trigger: GGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | GAGGGTCGCCATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGTCGGCCATCTTGGGAACAGATACCA | + |
Preference number: 5 (lower is better) Translates to: EGRHAHCQSLTARSG*GMSARCRPSWEQIP Trigger: TGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | TTCACTGATATTCGGGCCATGGCCTGGGGTCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGTAGGCCAGCACTCTCGTACCTCTGC | + |
Preference number: 5 (lower is better) Translates to: FTDIRAMAWGPASPV*PSSRHRRPALSYLC Trigger: GCAGAGGTACGAGAGTGCTGGCCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 90 bp | GCCATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATaGGTGCCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATGC | + |
Preference number: 5 (lower is better) Translates to: AMPTAKALQPAQGAA*VPGVGHLGNRYQLC Trigger: GCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | GGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTGCCATCACTaGCACCATAGCCTCACAGGCATCAGCCAGCGCTGCACCCTCACC | + |
Preference number: 5 (lower is better) Translates to: GVFATIYCHTQCCHH*HHSLTGISQRCTLT Trigger: GGTGAGGGTGCAGCGCTGGCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | TCGGCCCAGCTCTTCCCTGGCCTGTGGATTAAAGGTCACCGCAGCTaGCCAACCTTTAGCAGAGCCCAGGACGTCTGCGTAGCTGAAGCC | + |
Preference number: 5 (lower is better) Translates to: SAQLFPGLWIKGHRS*PTFSRAQDVCVAEA Trigger: GGCTTCAGCTACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GGACATTGCCATTGCCACCAGCACCCTGGTCATGGAGGCTGCAGATaGGGTTTCCTCCTGGGGCCTCCACACAAGCCCGGATCACACGAT | + |
Preference number: 5 (lower is better) Translates to: GHCHCHQHPGHGGCR*GFLLGPPHKPGSHD Trigger: ATCGTGTGATCCGGGCTTGTGTGGAGGCCCCAGGAGGAAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGGTGGCAATGGCAATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CCA 90 bp | GCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTTaGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTGGTGAGG | + |
Preference number: 5 (lower is better) Translates to: ATSARGVCRGPTHCC*ATRPPTERSTLLVR Trigger: CCTCACCAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | ACAAGGTTCTCGGGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: TRFSGRSRSGGCSPS*EKHWARAVPPSRCC Trigger: GCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCCCGAGAACCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | TCCTGGTGGCTCAGTGCTACAACAGCCACATCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGCTGTTGGGCAACAAGGCCACCCACA | + |
Preference number: 5 (lower is better) Translates to: SWWLSATTATSARGV*RGPTHCCWATRPPT Trigger: TGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGTAGCACTGAGCCACCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | AAAGGTCACCGCAGCTGCCCAACCTTTAGCAGAGCCCAGGACGTCTaGGTAGCTGAAGCCGCCCACAAAGGCCACACCACGGAATGTGTC | + |
Preference number: 5 (lower is better) Translates to: KGHRSCPTFSRAQDV*VAEAAHKGHTTECV Trigger: GACACATTCCGTGGTGTGGCCTTTGTGGGCGGCTTCAGCTACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | CTCAGCTCCTTTAGGACATTGCCATTGCCACCAGCACCCTGGTCATaGAGGCTGCAGATGGGGTTTCCTCCTGGGGCCTCCACACAAGCC | + |
Preference number: 5 (lower is better) Translates to: LSSFRTLPLPPAPWS*RLQMGFPPGASTQA Trigger: GGCTTGTGTGGAGGCCCCAGGAGGAAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGGTGGCAATGGCAATGTCCTAAAGGAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CCA 90 bp | CAGGCTCCTCTACTACCACAGCCTTATTCACTGATATTCGGGCCATaGCCTGGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGACACC | + |
Preference number: 5 (lower is better) Translates to: QAPLLPQPYSLIFGP*PGVQPRLCGPVPDT Trigger: GGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAGAGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | CTATGCCCCCTGGAGATCCATTGGGGTTCAGAGGGTACTGCTCTGTaGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCT | + |
Preference number: 5 (lower is better) Translates to: LCPLEIHWGSEGTAL*GSHHRLPSAEEPGP Trigger: AGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | GTAACGTCGGGTGGTCTCTACCCGATCCACAGCCCTCAGCCCGGCTaGCTGGCACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAA | + |
Preference number: 5 (lower is better) Translates to: VTSGGLYPIHSPQPG*LAHRNNVGRCWSRE Trigger: TTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCGGGTAGAGACCACCCGACGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | ACAACAGCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTaGTGTTGGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: TTATSARGVCRGPTH*CWATRPPTERSTLL Trigger: CAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | ATTGGGGTTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTaGCCAGTGCAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: IGVQRVLLCGVPIIV*PVQRNQALGLDLGL Trigger: CAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | CAGCAGCTGTCCTCCTGGGTCCAGTTCCTAGCATTGATGAAGAGCTaGAGCCACGGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGC | + |
Preference number: 5 (lower is better) Translates to: QQLSSWVQFLALMKS*SHGEVGRTSKGEGR Trigger: GCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGCAGCTCTTCATCAATGCTAGGAACTGGACCCAGGAGGACAGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GATCCACAGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTaGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCA | + |
Preference number: 5 (lower is better) Translates to: DPQPSARLPGTQKQC*SMLESRNSAWVPPP Trigger: TGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | CGTCGGGTGGTCTCTACCCGATCCACAGCCCTCAGCCCGGCTGCCTaGCACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAAATTC | + |
Preference number: 5 (lower is better) Translates to: RRVVSTRSTALSPAA*HTETMLVDAGVEKF Trigger: GAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCGGGTAGAGACCACCCGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | TCCTCTACTACCACAGCCTTATTCACTGATATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGACACCGTAGG | + |
Preference number: 5 (lower is better) Translates to: SSTTTALFTDIRAMA*GPASPVWPSSRHRR Trigger: CCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS-3UTR CAA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCCCCTGGAGATCCATaGGGGTTCAGAGGGTACTGC | + |
Preference number: 5 (lower is better) Translates to: DPESCSFQLGRGWEGLMYPPGDP*GFRGYC Trigger: GCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | AGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATaGTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAA | + |
Preference number: 5 (lower is better) Translates to: SPQPGCLAHRNNVGR*WSREIQPGSHLQQQ Trigger: TTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | GGGAAGTTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTaGTGTTGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGC | + |
Preference number: 5 (lower is better) Translates to: GKLCVSAVKTTCLSP*CCWKQLGRVESSGR Trigger: GCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAACTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | AGCCTGCCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTGCTaGCCTCTTCTCGCAAGATGGCAACTCGAGGGACGGGTCCACCAG | + |
Preference number: 5 (lower is better) Translates to: SLPSERHQPFLGLHC*PLLARWQLEGRVHQ Trigger: CTGGTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 90 bp | TTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTGCCCAGTaGAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCTTGGAGTTCA | + |
Preference number: 5 (lower is better) Translates to: FRGYCSVGFPSSSAQ*RGTRPLASILAWSS Trigger: TGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | AGAAATCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTGGTTaGCCTTCTCCAGGGCAGGCCGACCCTCAGCTAGTATGTCGATGG | + |
Preference number: 5 (lower is better) Translates to: RNRGPRSQEPNLAPG*PSPGQADPQLVCRW Trigger: CCATCGACATACTAGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGATTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | CATCAGCCATTTCTCGGTCTCCATTGCTGCCCTCTTCTCGCAAGATaGCAACTCGAGGGACGGGTCCACCAGGTTTACAGGGCACAGAGG | + |
Preference number: 5 (lower is better) Translates to: HQPFLGLHCCPLLAR*QLEGRVHQVYRAQR Trigger: CCTCTGTGCCCTGTAAACCTGGTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 90 bp | CCAATGCCGCCACTGAACATGATGGGCTTGATCCACTCACGTCTCTaGCCATCTGGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCC | + |
Preference number: 5 (lower is better) Translates to: PMPPLNMMGLIHSRL*PSGSWRPKERANPA Trigger: GGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATGTTCAGTGGCGGCATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | GATTATAATCTGGGATGTGCAGGTTTCCAAAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCCCACGGCCTGTGCACTGGACGTCTC | + |
Preference number: 5 (lower is better) Translates to: DYNLGCAGFQSNSQQ*QLPRGPHGLCTGRL Trigger: GAGACGTCCAGTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCTTTGGAAACCTGCACATCCCAGATTATAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | CAAAGCCTGCCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGATGGCAACTCGAGGGACGGGTCCAC | + |
Preference number: 5 (lower is better) Translates to: QSLPSERHQPFLGLH*CPLLARWQLEGRVH Trigger: GTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAAATCGTTaGAGCCAGGAACAAGCCAGGGCTCCTGAGCAACATCATCCCGCA | + |
Preference number: 5 (lower is better) Translates to: ESRNSAWVPPPATNR*SQEQARAPEQHHPA Trigger: TGCGGGATGATGTTGCTCAGGAGCCCTGGCTTGTTCCTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | CCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATGCTaGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAAATC | + |
Preference number: 5 (lower is better) Translates to: PQPGCLAHRNNVGRC*SREIQPGSHLQQQI Trigger: GATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | TGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTGCTaGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTG | + |
Preference number: 5 (lower is better) Translates to: CVSAVKTTCLSPCCC*KQLGRVESSGRRNL Trigger: CAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | GCCACTGAACATGATGGGCTTGATCCACTCACGTCTCTGACCATCTaGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCCAGCACTGG | + |
Preference number: 5 (lower is better) Translates to: ATEHDGLDPLTSLTI*KLETQRAGKSSQHW Trigger: CCAGTGCTGGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATGTTCAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | TCCAACACCAGACCGGGCTCTTCCGCAAACAGCACAGGCAATGCATaGATCCCAGGGGCAGGTACATCTACCTCTATCCCACAGTTCCCA | + |
Preference number: 5 (lower is better) Translates to: SNTRPGSSANSTGNA*IPGAGTSTSIPQFP Trigger: TGGGAACTGTGGGATAGAGGTAGATGTACCTGCCCCTGGGATCCATGCATTGCCTGTGCTGTTTGCGGAAGAGCCCGGTCTGGTGTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | GGCCATCTTGGGAACAGATACCAGCTATGCCCCCTGGAGATCCATTaGGGTTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTG | + |
Preference number: 5 (lower is better) Translates to: GHLGNRYQLCPLEIH*GSEGTALWGSHHRL Trigger: CAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS-3UTR CAA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACA | + |
Preference number: 5 (lower is better) Translates to: DPESCSFQLGRGWEGLMYRANTR*VRASDT Trigger: TGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | TGGCCTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGATCAGGAGGG | + |
Preference number: 5 (lower is better) Translates to: WPEQRRHSFSSPWVI*KARTRFSGRSRSGG Trigger: CCCTCCTGATCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | TTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTaGTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAAT | + |
Preference number: 5 (lower is better) Translates to: LCVSAVKTTCLSPCC*WKQLGRVESSGRRN Trigger: ATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | CGGATCACACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCTCCCTGGACC | + |
Preference number: 5 (lower is better) Translates to: RITRFIFCSISGSPR*TAPKSRSLVLSPWT Trigger: GGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS GCA 90 bp | TCCTTCAGGCCCTGTTTCTCCTCTATCACACAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAACTTGTTTCCTCCCAGAGGGCTCTT | + |
Preference number: 5 (lower is better) Translates to: SFRPCFSSITQRGSA*SRSSWKLVSSQRAL Trigger: AAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAAACAGGGCCTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | TGTGAAGACAACATGTCTAAGCCCCTGCTGTTGCTGGAAGCAGCTTaGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCC | + |
Preference number: 5 (lower is better) Translates to: CEDNMSKPLLLLEAA*AGRVLRPQEFDFLP Trigger: GGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | TTCTCCTCTATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTaGAAACTTGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAGGC | + |
Preference number: 5 (lower is better) Translates to: FSSITQRGSACSRSS*KLVSSQRALNSPTG Trigger: GCCTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | TGGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTTaGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAAATGCCATGT | + |
Preference number: 5 (lower is better) Translates to: WGSHHRLPSAEEPGP*PRSWLGVQEKKMPC Trigger: ACATGGCATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 90 bp | AGGGCAGCCGAACAGCCACATCAACTTCTTCATCTCCTCAGCCCATaGAAGGGTCTCAGCTGCCCAGTGTACATTGTAGCACAGCTCAGT | + |
Preference number: 5 (lower is better) Translates to: RAAEQPHQLLHLLSP*KGLSCPVYIVAQLS Trigger: ACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAGTTGATGTGGCTGTTCGGCTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | GGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCACAGAACTTGAGGACATTGTTAGGG | + |
Preference number: 5 (lower is better) Translates to: GRVESSGRRNLTFFP*IALLLSQNLRTLLG Trigger: CCCTAACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | ATCTGGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCCAGCACTaGCTCTCCAAACTTGTTGCCATAGTCAGATGCTCCATTGCTGGC | + |
Preference number: 5 (lower is better) Translates to: IWKLETQRAGKSSQH*LSKLVAIVRCSIAG Trigger: GCCAGCAATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCG | + |
Preference number: 5 (lower is better) Translates to: DVAGWVGRLAVHFKLEPISKPLL*LEAAWA Trigger: CGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | AGAGGGAATGCGCTAGCTTCTTCCCATCCACATGGAGCTGGCCCTTaGAGAACCAATGTCGGCTGTGCTCACTATTGGACTGAGCCAAGT | + |
Preference number: 5 (lower is better) Translates to: RGNALASSHPHGAGP*RTNVGCAHYWTEPS Trigger: ACTTGGCTCAGTCCAATAGTGAGCACAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATGTGGATGGGAAGAAGCTAGCGCATTCCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | CATCATGGCCTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTaGTATGAAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGATCAG | + |
Preference number: 5 (lower is better) Translates to: HHGLSKDGILSAAPG*YERHAQGSREGLDQ Trigger: CTGATCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAGGCCATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | AGACCTCCACTGTACTGGGGTTCCGCTGCAGCTCTTGAAAGCGCTTaGTATAGAAATCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCT | + |
Preference number: 5 (lower is better) Translates to: RPPLYWGSAAALESA*YRNRGPRSQEPNLA Trigger: AGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCACACTCTGAAGTGTaGGCAGTTTCTCTTGTAGTC | + |
Preference number: 5 (lower is better) Translates to: DPESCSFQLGRGWEGLMYPHSEV*AVSLVV Trigger: GACTACAAGAGAAACTGCCAACACTTCAGAGTGTGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCATGTCGATGGAGCCCTaGAGTGGGGCTGGAATGCTC | + |
Preference number: 5 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIMSMEP*SGAGML Trigger: GAGCATTCCAGCCCCACTCAAGGGCTCCATCGACAT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCCAGGTCACTGGTGTaGTCTCCCTGGACCTGCACA | + |
Preference number: 5 (lower is better) Translates to: DVAGWVGRLAVHFKLEPISRSLV*SPWTCT Trigger: TGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCCAGGTCTACAGGGGTaGGAGGTGTCAGGGGTGCAT | + |
Preference number: 5 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIPGLQG*EVSGVH Trigger: ATGCACCCCTGACACCTCCAACCCCTGTAGACCTGG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIGPAGN*FPPRGL Trigger: GAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | GTGCATTCAAGGTTGGGTCACCTAGCTGGAAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCACTCAGCTCCTTTAGGACATTGCCAT | + |
Preference number: 5 (lower is better) Translates to: VHSRLGHLAGSGWCK*WLLLGHSAPLGHCH Trigger: ATGGCAATGTCCTAAAGGAGCTGAGTGACCCAGAAGGAGCCATCATTTACACCAGCCGCTTCCAGCTAGGTGACCCAACCTTGAATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | CTAGGCATTCACGATCATCCACTAGTACAATTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAGCTGGGCAGCGTTCCCGGGCACTGG | + |
Preference number: 5 (lower is better) Translates to: LGIHDHPLVQFSCLQ*LCPQNKLGSVPGHW Trigger: CCAGTGCCCGGGAACGCTGCCCAGCTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAATTGTACTAGTGGATGATCGTGAATGCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | CCACATCAACTTCTTCATCTCCTCAGCCCATGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCACAGCTCAGTCTCCACACTCTGAAG | + |
Preference number: 5 (lower is better) Translates to: PHQLLHLLSPWKGLS*PVYIVAQLSLHTLK Trigger: CTTCAGAGTGTGGAGACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAGTTGATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | ACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACAAATCGTTGGAGCCAGGAACAAGCC | + |
Preference number: 5 (lower is better) Translates to: TQKQCWSMLESRNSA*VPPPATNRWSQEQA Trigger: GGCTTGTTCCTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 90 bp | AAATCCAGCCAGCACTGGCTCTCCAAACTTGTTGCCATAGTCAGATaGTCCATTGCTGGCCTCAATAGCAACCTCCAAAGGCCTGGCAAA | + |
Preference number: 5 (lower is better) Translates to: KSSQHWLSKLVAIVR*SIAGLNSNLQRPGK Trigger: TTTGCCAGGCCTTTGGAGGTTGCTATTGAGGCCAGCAATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCATGCTGAGGGAGTCTTaGCCACCATCTACTGCCACA | + |
Preference number: 5 (lower is better) Translates to: DVAGWVGRLAVHFKLEPIMLRES*PPSTAT Trigger: TGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCAT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 90 bp | TGTGCTCACTATTGGACTGAGCCAAGTCAAAGACCTCCACTGTACTaGGGTTCCGCTGCAGCTCTTGAAAGCGCTTGGTATAGAAATCGA | + |
Preference number: 5 (lower is better) Translates to: CAHYWTEPSQRPPLY*GSAAALESAWYRNR Trigger: TCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCTTTGACTTGGCTCAGTCCAATAGTGAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAGCCTGGCAGCAGCCTaGGGGTCCAGCAGGCTCTTG | + |
Preference number: 5 (lower is better) Translates to: ILVLAKMLLEITWDTPESSLAAA*GSSRLL Trigger: CAAGAGCCTGCTGGACCCCAAGGCTGCTGCCAGGCT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGTTCCGCTGCAGCTCTaGAAAGCGCTTGGTATAGAA | + |
Preference number: 5 (lower is better) Translates to: RSDFPSPNIFLWWCWTGIVPLQL*KALGIE Trigger: TTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAAC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | CTGTTGTCACAGAACTTGAGGACATTGTTAGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCAAAGAGGGAATGCGCTAGCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: LLSQNLRTLLGLEDA*VLMMDSKRECASFF Trigger: GAAGAAGCTAGCGCATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTGTGACAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 90 bp | ATTCACGATCATCCACTAGTACAATCTGGAAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCACTCAGCTCCTTTAGGACATTGCCAT | + |
Preference number: 5 (lower is better) Translates to: IHDHPLVQSGSGWCK*WLLLGHSAPLGHCH Trigger: ATGGCAATGTCCTAAAGGAGCTGAGTGACCCAGAAGGAGCCATCATTTACACCAGCCGCTTCCAGATTGTACTAGTGGATGATCGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149703.4 |
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CDS-3UTR CAA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTGGGTCCAGCAGGCTCTaGACTGGCTGCTCTCCCAGG | + |
Preference number: 5 (lower is better) Translates to: QFITKLCFVNWETPLKYLGSSRL*TGCSPR Trigger: CCTGGGAGAGCAGCCAGTCAAGAGCCTGCTGGACCC...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCCCAGAGCAGAGATCTaGCATGGTCACATCCCACAC | + |
Preference number: 5 (lower is better) Translates to: GNQTQETQILGKCSNTQMPRAEI*HGHIPH Trigger: GTGTGGGATGTGACCATGCAAGATCTCTGCTCTGGG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATT | + |
Preference number: 5 (lower is better) Translates to: GNQTQETQILGKCSNTQMSGRRN*TFFPWI Trigger: AATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAG | + |
Preference number: 5 (lower is better) Translates to: QFITKLCFVNWETPLKYLFRVSP*HSSKVQ Trigger: CTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAA...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCC | + |
Preference number: 5 (lower is better) Translates to: GNQTQETQILGKCSNTQMHTIHL*LHFRVS Trigger: GGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTATTTCTCGGTCTCCATaGCTGCCCTCTTCTCGCAAG | + |
Preference number: 5 (lower is better) Translates to: YSSTASKGMFTCPKWYLGISRSP*LPSSRK Trigger: CTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAAT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTACATGGAGCTGGCCCTaGAAGAACCAATGTCGGCTG | + |
Preference number: 5 (lower is better) Translates to: QFITKLCFVNWETPLKYLTWSWP*KNQCRL Trigger: CAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATGT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGCTCTGGGGGCTTTTaGCCTACATGTTTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLGSGGF*PTCLAS Trigger: GGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTGTTGTCACAGAACTaGAGGACATTGTTAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: GNQTQETQILGKCSNTQMLLSQN*RTLLGL Trigger: CAACCCTAACAATGTCCTCAAGTTCTGTGACAACAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCTTTCTTCCCCTGGATaGCACTGCTGTTGTCACAGA | + |
Preference number: 5 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLLSSPG*HCCCHR Trigger: TCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS-3UTR CAA 90 bp | TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTTGGATTGCACTGCTGTaGTCACAGAACTTGAGGACA | + |
Preference number: 5 (lower is better) Translates to: YIFFHSIKGNVHMSKMVLWIALL*SQNLRT Trigger: TGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCA...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | CAGCACAGAGCCTTCCATCCCTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTACGGTGGCCCATCGGGA | + |
Preference number: 6 (lower is better) Translates to: QHRAFHPSEHQG*PRLHTYGGPSG Trigger: TCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGGAAGGCTCTGTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 72 bp | ACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATaGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGG | + |
Preference number: 6 (lower is better) Translates to: TVAHRDSNRPDR*WRSRRPGCVGW Trigger: CCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 90 bp | TCCACACGTACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATaGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: STRTVAHRDSNRPDR*WRSRRPGCVGWESW Trigger: CCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | ATTCGGGCCATGGCCTGGGGTCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGTAGGCCAGCACTCTCG | + |
Preference number: 6 (lower is better) Translates to: IRAMAWGPASPV*PSSRHRRPALS Trigger: CGAGAGTGCTGGCCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | GGAGCATCAGGGCTGGCCCCGGCTCCACACGTACGGTaGCCCATCGGGACTCGAACCGCCCAGACAGATTGT | + |
Preference number: 6 (lower is better) Translates to: GASGLAPAPHVR*PIGTRTAQTDC Trigger: ACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 72 bp | GAGCCAGCAGCTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTCGGAATCGGCCCAGCT | + |
Preference number: 6 (lower is better) Translates to: EPAADSHYTRPG*RCPAAFGIGPA Trigger: AGCTGGGCCGATTCCGAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAGCTGCTGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | AGATCAGGAGGGTGCTCCCCAAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGCCCG | + |
Preference number: 6 (lower is better) Translates to: RSGGCSPSWEKH*ARAVPPSRCCP Trigger: CGGGCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | CGAACCGCCCAGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTaGGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTGGGAT | + |
Preference number: 6 (lower is better) Translates to: RTAQTDCGGAGGPAV*AGSPGLAQLALHWD Trigger: ATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 72 bp | CCTGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCATCTACTGCCACACCCA | + |
Preference number: 6 (lower is better) Translates to: PAPSQCRPGQPC*GSLCHHLLPHP Trigger: TGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | CAGAGGCCACAGGAAAGGTGGGCGGCAGGTAGTAGCTaGGCCCTGTCCGCTCCTTCAGGCCCTGTTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: QRPQERWAAGSS*ALSAPSGPVSP Trigger: AGGAGAAACAGGGCCTGAAGGAGCGGACAGGGCCCAGCTACTACCTGCCGCCCACCTTTCCTGTGGCCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | AGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTaGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTG | + |
Preference number: 6 (lower is better) Translates to: RLWRSRRPGCVG*ESWPGSACSSL Trigger: CAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | AGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTaGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTC | + |
Preference number: 6 (lower is better) Translates to: RQIVAEQEARLC*LGVLAWLSLLF Trigger: GAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 90 bp | TGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTGAGGGAGTCTTaGCCACCATCTACTGCCACACCCAGTGCTGCCATCACTGCCACC | + |
Preference number: 6 (lower is better) Translates to: CTVSVPTRAAMLRES*PPSTATPSAAITAT Trigger: GGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | GGCTGTGTTGGCTGGGAGTCCTGGCCTGGCTCAGCTTaGTCTTCACTGGGATCACTTCCCACCCAGCCCAGA | + |
Preference number: 6 (lower is better) Translates to: GCVGWESWPGSA*SSLGSLPTQPR Trigger: TCTGGGCTGGGTGGGAAGTGATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | CATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGTCGGCCATCTTGGGAA | + |
Preference number: 6 (lower is better) Translates to: HAHCQSLTARSG*GMSARCRPSWE Trigger: TTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | TCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTaGTTGGCCTTCTCCAGGGCAGGCCGACCCTCAGCT | + |
Preference number: 6 (lower is better) Translates to: SRSQESRAKPSS*LAFSRAGRPSA Trigger: AGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | GCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTTaGGCAACAAGGCCACCCACAGAGCGATCCACCTTG | + |
Preference number: 6 (lower is better) Translates to: ARGVCRGPTHCC*ATRPPTERSTL Trigger: CAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | CTGCACTTCACATCTCGGAGGTCGGTGACCAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACAGCAAGCCTGGCAGCAGCCTTGGGG | + |
Preference number: 6 (lower is better) Translates to: LHFTSRRSVTRANTR*VRASDTASLAAALG Trigger: CCCCAAGGCTGCTGCCAGGCTTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATGTGAAGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CTGGGATGTGCAGGTTTCCAAAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCCCACGGCCTGTGCACT | + |
Preference number: 6 (lower is better) Translates to: LGCAGFQSNSQQ*QLPRGPHGLCT Trigger: AGTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCTTTGGAAACCTGCACATCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | ACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTaGTGTTGGGCAACAAGGCCACCCACAGAGCGATCC | + |
Preference number: 6 (lower is better) Translates to: TSARGVCRGPTH*CWATRPPTERS Trigger: GGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTaGCAGGTGTCGGCCATCTTGGGAACAGATACCAGC | + |
Preference number: 6 (lower is better) Translates to: PKPYSPLRVRHE*QVSAILGTDTS Trigger: GCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | GGAAGAACATCAAAGGGAGAGGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATG | + |
Preference number: 6 (lower is better) Translates to: GRTSKGEGRHAH*QSLTARSGCGM Trigger: CATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | GGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATaGCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTG | + |
Preference number: 6 (lower is better) Translates to: GGGKNIKGRGSP*PLPKPYSPLRV Trigger: CACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | GGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTGGTTaGCCTTCTCCAGGGCAGGCCGACCCTCAGCTAGTA | + |
Preference number: 6 (lower is better) Translates to: GPRSQEPNLAPG*PSPGQADPQLV Trigger: TACTAGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | TCGGGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGAGCCGTTCCTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: SGRSRSGGCSPS*EKHWARAVPPS Trigger: GCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | CCGCCTTCGGAATCGGCCCAGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGCTGCCCAACCTTTAGC | + |
Preference number: 6 (lower is better) Translates to: PPSESAQLFPGL*IKGHRSCPTFS Trigger: GCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGATTCCGAAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 72 bp | AGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTaGGGCAACAAGGCCACCCACAGAGCGATCCACCTT | + |
Preference number: 6 (lower is better) Translates to: SQRSLQGSDTLL*GNKATHRAIHL Trigger: AAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | CGATCCACAGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTaGGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCC | + |
Preference number: 6 (lower is better) Translates to: RSTALSPAAWHTETM*VDAGVEKFSLGPTS Trigger: GGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | AGCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTaGGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTGGTGAG | + |
Preference number: 6 (lower is better) Translates to: SHISQRSLQGSDTLL*GNKATHRAIHLVGE Trigger: CTCACCAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 72 bp | ACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATaGGTGCCAGGTGTCGGCCATCTTGGGAACAGATAC | + |
Preference number: 6 (lower is better) Translates to: TAKALQPAQGAA*VPGVGHLGNRY Trigger: GTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | GGCAGCCATGCTGAGGGAGTCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCATCACTGCCACCATAGC | + |
Preference number: 6 (lower is better) Translates to: GSHAEGVFATIY*HTQCCHHCHHS Trigger: GCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | TACTGCTCTGTGGGGTTCCCATCATCGTCTGCCCAGTaGAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCT | + |
Preference number: 6 (lower is better) Translates to: YCSVGFPSSSAQ*RGTRPLASILA Trigger: AGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | GGTCTCCCCGTTGCACAGCTCCAAAGTCCAGGTCACTaGTGTTGTCTCCCTGGACCTGCACAGACGAAGCAG | + |
Preference number: 6 (lower is better) Translates to: GLPVAQLQSPGH*CCLPGPAQTKQ Trigger: CTGCTTCGTCTGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CCA 72 bp | ACCACAGCCTTATTCACTGATATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGA | + |
Preference number: 6 (lower is better) Translates to: TTALFTDIRAMA*GPASPVWPSSR Trigger: TCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | TCAGGGTGCGGCATGAGTGCCAGGTGTCGGCCATCTTaGGAACAGATACCAGCTATGCCCCCTGGAGATCCA | + |
Preference number: 6 (lower is better) Translates to: SGCGMSARCRPS*EQIPAMPPGDP Trigger: TGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 72 bp | CCCCGTTGCACAGCTCCAAAGTCCAGGTCACTGGTGTaGTCTCCCTGGACCTGCACAGACGAAGCAGCTCCA | + |
Preference number: 6 (lower is better) Translates to: PRCTAPKSRSLV*SPWTCTDEAAP Trigger: TGGAGCTGCTTCGTCTGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CAA 72 bp | ACATCTCGGAGGTCGGTGACCAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACAGCAAGCCTGGCAGCA | + |
Preference number: 6 (lower is better) Translates to: TSRRSVTRANTR*VRASDTASLAA Trigger: TGCTGCCAGGCTTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | TCCTCCTGGGGCCTCCACACAAGCCCGGATCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCCCCGTTGCACAGCTCCAAAGTCCAG | + |
Preference number: 6 (lower is better) Translates to: SSWGLHTSPDHTIHL*LHFRVSPLHSSKVQ Trigger: CTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGCCCCAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS GCA 72 bp | CCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATaGTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTC | + |
Preference number: 6 (lower is better) Translates to: PGCLAHRNNVGR*WSREIQPGSHL Trigger: GAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | TCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTaGTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGC | + |
Preference number: 6 (lower is better) Translates to: SAVKTTCLSPCC*WKQLGRVESSG Trigger: GCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | TGTCGCACACTCAGTTCTGGGGGCAAAGCCAAAGGCTaGAGCACAGGGGGTTTCCTCTGGAGGAAGAACTCC | + |
Preference number: 6 (lower is better) Translates to: CRTLSSGGKAKG*STGGFLWRKNS Trigger: GGAGTTCTTCCTCCAGAGGAAACCCCCTGTGCTGCAGCCTTTGGCTTTGCCCCCAGAACTGAGTGTGCGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CTCAGTGCTACAACAGCCACATCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGCTGTTGGGCAACAAGG | + |
Preference number: 6 (lower is better) Translates to: LSATTATSARGV*RGPTHCCWATR Trigger: CCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGTAGCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | GGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTaGCATCACTGCCACCATAGCCTCACAGGCATCAGC | + |
Preference number: 6 (lower is better) Translates to: GVFATIYCHTQC*HHCHHSLTGIS Trigger: GCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CTCTTCCCTGGCCTGTGGATTAAAGGTCACCGCAGCTaGCCAACCTTTAGCAGAGCCCAGGACGTCTGCGTA | + |
Preference number: 6 (lower is better) Translates to: LFPGLWIKGHRS*PTFSRAQDVCV Trigger: TACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | CCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTaGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTC | + |
Preference number: 6 (lower is better) Translates to: PSARLPGTQKQC*SMLESRNSAWV Trigger: GACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | AACATGTCTAAGCCCCTGCTGTTGCTGGAAGCAGCTTaGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGAC | + |
Preference number: 6 (lower is better) Translates to: NMSKPLLLLEAA*AGRVLRPQEFD Trigger: GTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | TCCCAGCACCCAGTCAAGGTCCAGGTCTACAGGGGTTaGAGGTGTCAGGGGTGCATCTCCCTGACCAGTTTT | + |
Preference number: 6 (lower is better) Translates to: SQHPVKVQVYRG*RCQGCISLTSF Trigger: AAAACTGGTCAGGGAGATGCACCCCTGACACCTCCAACCCCTGTAGACCTGGACCTTGACTGGGTGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | CTACTACCACAGCCTTATTCACTGATATTCGGGCCATaGCCTGGGGTCCAGCCTCGCCTGTGTGGCCCAGTT | + |
Preference number: 6 (lower is better) Translates to: LLPQPYSLIFGP*PGVQPRLCGPV Trigger: AACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 72 bp | GCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTaGGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGT | + |
Preference number: 6 (lower is better) Translates to: ALSPAAWHTETM*VDAGVEKFSLG Trigger: ACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | CTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGG | + |
Preference number: 6 (lower is better) Translates to: LCCEDNMSKPLL*LEAAWAGRVLR Trigger: CCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | GGCCTCCACACAAGCCCGGATCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCCCCGTTGCACAGCTCC | + |
Preference number: 6 (lower is better) Translates to: GLHTSPDHTIHL*LHFRVSPLHSS Trigger: GGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CAA 72 bp | TTCCCAGCACCCAGTCAAGGTCCAGGTCTACAGGGGTaGGAGGTGTCAGGGGTGCATCTCCCTGACCAGTTT | + |
Preference number: 6 (lower is better) Translates to: FPAPSQGPGLQG*EVSGVHLPDQF Trigger: AAACTGGTCAGGGAGATGCACCCCTGACACCTCCAACCCCTGTAGACCTGGACCTTGACTGGGTGCTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | GTTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAA | + |
Preference number: 6 (lower is better) Translates to: VMCLCCEDNMSKPLL*LEAAWAGRVLRPQE Trigger: TTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | GTGGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTaGGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAAATGCCATG | + |
Preference number: 6 (lower is better) Translates to: VGFPSSSAQCRGTRP*ASILAWSSGEENAM Trigger: CATGGCATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS TCA 72 bp | CGCCCACAAAGGCCACACCACGGAATGTGTCCAACCTaGTGGCCCCAGAGCAGAGATCTTGCATGGTCACAT | + |
Preference number: 6 (lower is better) Translates to: RPQRPHHGMCPT*WPQSRDLAWSH Trigger: ATGTGACCATGCAAGATCTCTGCTCTGGGGCCATCAGGTTGGACACATTCCGTGGTGTGGCCTTTGTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | GCCTCCACACAAGCCCGGATCACACGATTCATCTTTTaGTCCATTTCCGGGTCTCCCCGTTGCACAGCTCCA | + |
Preference number: 6 (lower is better) Translates to: ASTQARITRFIF*SISGSPRCTAP Trigger: TGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS GCA 72 bp | CCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATaGCCCCTGGAGATCCATTGGGGTTCAGAGGGTACT | + |
Preference number: 6 (lower is better) Translates to: PGVGHLGNRYQL*PLEIHWGSEGT Trigger: AGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | GGCTGCCTGGCACACAGAAACAATGTTGGTCGATGCTaGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAG | + |
Preference number: 6 (lower is better) Translates to: GCLAHRNNVGRC*SREIQPGSHLQ Trigger: CTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | CAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATTGCACTGCTGTTGTCA | + |
Preference number: 6 (lower is better) Translates to: QLGRVESSGRRN*TFFPWIALLLS Trigger: TGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | AGCGTGGCTCTGCCTGCAGTAGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAG | + |
Preference number: 6 (lower is better) Translates to: SVALPAVGPAGN*FPPRGLLTPQQ Trigger: CTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 90 bp | TGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATTGCACTGCTGTTGTCACAGAACTTG | + |
Preference number: 6 (lower is better) Translates to: CWKQLGRVESSGRRN*TFFPWIALLLSQNL Trigger: CAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | CCGGATCACACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCTCCCTGGAC | + |
Preference number: 6 (lower is better) Translates to: PDHTIHLLLHFRVSP*HSSKVQVTGVVSLD Trigger: GTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS CAA 90 bp | CTATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAGGCTCCTCTA | + |
Preference number: 6 (lower is better) Translates to: LSHSVALPAVGPAGN*FPPRGLLTPQQAPL Trigger: TAGAGGAGCCTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | CCTTTACAACCTCCATGCCTGGCTCTGGGGGCTTTTTaGCTACATGTTTGGCTTCCATGGACCCAATGCCGC | + |
Preference number: 6 (lower is better) Translates to: PLQPPCLALGAF*LHVWLPWTQCR Trigger: GCGGCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CCCTGTTTCTCCTCTATCACACAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAACTTGTTTCCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: PCFSSITQRGSA*SRSSWKLVSSQ Trigger: CTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAAACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS GCA 72 bp | TCCTCCTGGGTCCAGTTCCTAGCATTGATGAAGAGCTaGAGCCACGGGGAGGTGGGAAGAACATCAAAGGGA | + |
Preference number: 6 (lower is better) Translates to: SSWVQFLALMKS*SHGEVGRTSKG Trigger: TCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGCAGCTCTTCATCAATGCTAGGAACTGGACCCAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | CATGATGGGCTTGATCCACTCACGTCTCTGACCATCTaGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGC | + |
Preference number: 6 (lower is better) Translates to: HDGLDPLTSLTI*KLETQRAGKSS Trigger: GCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | ATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTaGAAACTTGTTTCCTCCCAGAGGGCTCTTAACTCC | + |
Preference number: 6 (lower is better) Translates to: ITQRGSACSRSS*KLVSSQRALNS Trigger: GGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | CATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTTaGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAA | + |
Preference number: 6 (lower is better) Translates to: HHRLPSAEEPGP*PRSWLGVQEKK Trigger: TTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CAA 72 bp | TCCATGCCTGGCTCTGGGGGCTTTTTGCCTACATGTTaGGCTTCCATGGACCCAATGCCGCCACTGAACATG | + |
Preference number: 6 (lower is better) Translates to: SMPGSGGFLPTC*ASMDPMPPLNM Trigger: CATGTTCAGTGGCGGCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 72 bp | CTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTaGTATGAAAGGCACGCACAAGGTTCTCGGGAAGGT | + |
Preference number: 6 (lower is better) Translates to: LSKDGILSAAPG*YERHAQGSREG Trigger: ACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CTTCTTCATCTCCTCAGCCCATGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCACAGCTCAGTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: LLHLLSPWKGLS*PVYIVAQLSLH Trigger: GTGGAGACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGATGGCAACTCGAGGGA | + |
Preference number: 6 (lower is better) Translates to: PSERHQPFLGLH*CPLLARWQLEG Trigger: TCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | CAATGTTGGTCGATGCTGGAGTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACAAATCGTTGGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: QCWSMLESRNSA*VPPPATNRWSQ Trigger: CTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | CTGTACTGGGGTTCCGCTGCAGCTCTTGAAAGCGCTTaGTATAGAAATCGAGGTCCCAGGAGTCAAGAGCCA | + |
Preference number: 6 (lower is better) Translates to: LYWGSAAALESA*YRNRGPRSQEP Trigger: TGGCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 90 bp | AGCCAAGTCAAAGACCTCCACTGTACTGGGGTTCCGCTGCAGCTCTaGAAAGCGCTTGGTATAGAAATCGAGGTCCCAGGAGTCAAGAGC | + |
Preference number: 6 (lower is better) Translates to: SQVKDLHCTGVPLQL*KALGIEIEVPGVKS Trigger: GCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCTTTGACTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 72 bp | CAAAGACGGCATTCTTTCAGCAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGA | + |
Preference number: 6 (lower is better) Translates to: QRRHSFSSPWVI*KARTRFSGRSR Trigger: TCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCT | + |
Preference number: 6 (lower is better) Translates to: RFIFCSISGSPR*TAPKSRSLVLS Trigger: AGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS GCA 72 bp | GAGATCTTGCATGGTCACATCCCACACCTCAAAGCCTaGCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: EILHGHIPHLKA*QVKGISHFSVS Trigger: GGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCTTTGAGGTGTGGGATGTGACCATGCAAGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000152964.3 |
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CDS CCA 72 bp | GAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCACAGAACTTGAGGACA | + |
Preference number: 6 (lower is better) Translates to: ESSGRRNLTFFP*IALLLSQNLRT Trigger: TGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | AGGACCTCCAACCTTTACAACCTCCATGCCTGGCTCTaGGGGCTTTTTGCCTACATGTTTGGCTTCCATGGA | + |
Preference number: 6 (lower is better) Translates to: RTSNLYNLHAWL*GLFAYMFGFHG Trigger: TCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGGTTGGAGGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | AAGCAAATGACCTTTCCCACCAGGATGTTTGAGGTCTaGGGTCACAGTGGCTGTGATGTCTGGACAGACAGC | + |
Preference number: 6 (lower is better) Translates to: KQMTFPTRMFEV*GHSGCDVWTDS Trigger: GCTGTCTGTCCAGACATCACAGCCACTGTGACCCCAGACCTCAAACATCCTGGTGGGAAAGGTCATTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | ACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAGGTCACTGGTGTTGTC | + |
Preference number: 6 (lower is better) Translates to: TIHLLLHFRVSP*HSSKVQVTGVV Trigger: GACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021282.12 ENSMUST00000149703.4 |
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CDS TCA 72 bp | CACGATCATCCACTAGTACAATTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAGCTGGGCAGCGTTCCC | + |
Preference number: 6 (lower is better) Translates to: HDHPLVQFSCLQ*LCPQNKLGSVP Trigger: GGGAACGCTGCCCAGCTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAATTGTACTAGTGGATGATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | CTCCGGCCGCAGGAATTTGACTTTCTTCCCCTGGATTaGACTGCTGTTGTCACAGAACTTGAGGACATTGTT | + |
Preference number: 6 (lower is better) Translates to: LRPQEFDFLPLD*TAVVTELEDIV Trigger: AACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CCA 72 bp | ATAAACAGGACCTCCAACCTTTACAACCTCCATGCCTaGCTCTGGGGGCTTTTTGCCTACATGTTTGGCTTC | + |
Preference number: 6 (lower is better) Translates to: INRTSNLYNLHA*LWGLFAYMFGF Trigger: GAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGGTTGGAGGTCCTGTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS TCA 72 bp | CAGAACTTGAGGACATTGTTAGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCAAAGAGGGAATGCGCT | + |
Preference number: 6 (lower is better) Translates to: QNLRTLLGLEDA*VLMMDSKRECA Trigger: AGCGCATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS GCA 72 bp | GTCACAGAACTTGAGGACATTGTTAGGGTTGGAGGATaGCTGAGTGCTCATGATGGATTCAAAGAGGGAATG | + |
Preference number: 6 (lower is better) Translates to: VTELEDIVRVGG*LSAHDGFKEGM Trigger: CATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |
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CDS CAA 72 bp | AGGAATTTGACTTTCTTCCCCTGGATTGCACTGCTGTaGTCACAGAACTTGAGGACATTGTTAGGGTTGGAG | + |
Preference number: 6 (lower is better) Translates to: RNLTFFPWIALL*SQNLRTLLGLE Trigger: CTCCAACCCTAACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021282.12 |