RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFAS (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020899

Ensembl transcript IDs: ENSMUST00000021282.12, ENSMUST00000149703.4, ENSMUST00000152964.3

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGTAGTCGCACATGCCTTAACCCCAGCACTCAGATGGATCTCTaGGTGCGAGGCCAGCCGGTCTACAACATAAGTTCCAGGACAGCC +
Preference number: 1 (lower is better)
Translates to: GSSRTCLNPSTQMDL*VRGQPVYNISSRTA
Trigger: GGCTGTCCTGGAACTTATGTTGTAGACCGGCTGGCCTCGCACTCAGAGATCCATCTGAGTGCTGGGGTTAAGGCATGTGCGACTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR TCA 90 bp ATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTaGTGTACATTATTCCTAGACCCTAAGCCAATGCCAAGCGCCTTG +
Preference number: 1 (lower is better)
Translates to: IRKAALFSWAEAGRD*CTLFLDPKPMPSAL
Trigger: CAAGGCGCTTGGCATTGGCTTAGGGTCTAGGAATAATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 90 bp TTCCTAACAACTAGCAGTGCATGTCTGAAAAGGGATCCGGAAAGCTaGTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACATT +
Preference number: 1 (lower is better)
Translates to: FLTTSSACLKRDPES*SFQLGRGWEGLMYI
Trigger: AATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATCCCTTTTCAGACATGCACTGCTAGTTGTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 90 bp AGCCTGGAACTCACTAGGCTGGCCTTGAACTTACAAAGATCCACCTaGCCCTATCTCCTAAGTGTTGGGATAAAAGGCATGTACCACCAT +
Preference number: 1 (lower is better)
Translates to: SLELTRLALNLQRST*PYLLSVGIKGMYHH
Trigger: ATGGTGGTACATGCCTTTTATCCCAACACTTAGGAGATAGGGGCAGGTGGATCTTTGTAAGTTCAAGGCCAGCCTAGTGAGTTCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 90 bp ACATACAACCTGCAGCTTAACACCTATTCACCATTAGTACCTTCTTaGGGTGCTACTTCTGCAGAAGCACAAGTGTTCTGCATTCCCCCA +
Preference number: 1 (lower is better)
Translates to: TYNLQLNTYSPLVPS*GATSAEAQVFCIPP
Trigger: TGGGGGAATGCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAGGTGTTAAGCTGCAGGTTGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 90 bp ATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATaGTACTTAGGTCAGAACACAGCACTTGGTAGAAGACCAGGATTT +
Preference number: 1 (lower is better)
Translates to: IYSSTASKGMFTCPK*YLGQNTALGRRPGF
Trigger: AAATCCTGGTCTTCTACCAAGTGCTGTGTTCTGACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAACGGAGTCAAAGGGTaGGCTGTGGGCCAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: RASLGYRLKADLTKPKKTNGVKG*AVGQGG
Trigger: ACCACCCTGGCCCACAGCTCACCCTTTGACTCCGTT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTCTGCCCACCCCTCTaGCTGTCAGCTGTCCTCGGA +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILCPPL*LSAVLG
Trigger: TCCGAGGACAGCTGACAGGCAGAGGGGTGGGCAGAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCACATGGGATACTCCTaGAAGCAATGGGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: RASLGYRLKADLTKPKKTHMGYS*KQWGKK
Trigger: CTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGGGGCAAGGCTAAAATaGGCAATGCAGCTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIGARLK*AMQLRS
Trigger: TGACCTCAGCTGCATTGCTCATTTTAGCCTTGCCCC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTGGTTCTTGCTAAGATaGTTTTGGAAATCACATGGG +
Preference number: 2 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYWFLLR*FWKSHG
Trigger: CCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGCTGAAAGCAGCTCTTaGAGGGGCAAGGCTAAAATG +
Preference number: 2 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIAESSS*RGKAKM
Trigger: CATTTTAGCCTTGCCCCTGCAAGAGCTGCTTTCAGC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGCTCCAGGGCTCTCTaGTCTAAGAAGGAAGGTATC +
Preference number: 2 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPISSRAL*SKKEGI
Trigger: GATACCTTCCTTCTTAGAGCAGAGAGCCCTGGAGCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGTTAAACTCAAGAGCTaGAAGCAGCTCTTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIVKLKS*KQLLQG
Trigger: CCCCTGCAAGAGCTGCTTTCAGCTCTTGAGTTTAAC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGACAGGCAGATGTAGCTaGGTGGGTAGGGCGCCTTGC +
Preference number: 2 (lower is better)
Translates to: GNQTQETQILGKCSNTQMTGRCS*VGRAPC
Trigger: GCAAGGCGCCCTACCCACCCAGCTACATCTGCCTGT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTGGGGTGCTACTTCTaGAGAAGCACAAGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILGCYF*RSTSVL
Trigger: CAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGGCAGATGTAGCTGGGTaGGTAGGGCGCCTTGCTGTT +
Preference number: 2 (lower is better)
Translates to: GNQTQETQILGKCSNTQMADVAG*VGRLAV
Trigger: AACAGCAAGGCGCCCTACCCACCCAGCTACATCTGC...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCAAGAATCAGGAATGTaGTCTGAGATAGGCACAGGT +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIQESGM*SEIGTG
Trigger: ACCTGTGCCTATCTCAGATCACATTCCTGATTCTTG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTGCCAGTAAATCTCTaGCCACCCCTCTGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: GNQTQETQILGKCSNTQMLPVNL*PPLCLS
Trigger: TGACAGGCAGAGGGGTGGGCAGAGATTTACTGGCAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGTCATCCCAGCATTTTaGTTCTTGCTAAGATGCTTT +
Preference number: 2 (lower is better)
Translates to: RASLGYRLKADLTKPKKTVIPAF*FLLRCF
Trigger: AAAGCATCTTAGCAAGAACCAAAATGCTGGGATGAC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTTTTGGAAATCACATaGGATACTCCTGAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: RASLGYRLKADLTKPKKTLLEIT*DTPESN
Trigger: ATTGCTTTCAGGAGTATCCCATGTGATTTCCAAAAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACAATGCCAAGCGCCTTaGCAACTCACCCGGGGTAAC +
Preference number: 2 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKQCQAP*QLTRGN
Trigger: GTTACCCCGGGTGAGTTGCCAAGGCGCTTGGCATTG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTGCTAAGATGCTTTTaGAAATCACATGGGATACTC +
Preference number: 2 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILLRCF*KSHGIL
Trigger: GAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CAA 90 bp GCAGATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTaGGAACCAATCATAGACAGTTTATCACTAAACTTTGCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: ADVAGWVGRLAVHFK*EPIIDSLSLNFALL
Trigger: TAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAAGAAAACGAGGATGTaGGAGCTCACTCAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGKKTRM*ELTQSS
Trigger: AGAGCTCTGAGTGAGCTCTCACATCCTCGTTTTCTT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGAAGCACAAGTGTTCTaGATTCCCCCAAACCCTGAA +
Preference number: 2 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGEAQVF*IPPNPE
Trigger: TTCAGGGTTTGGGGGAATGCAGAACACTTGTGCTTC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTATCAGGAATGTGATCTaGGATAGGCACAGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: QFITKLCFVNWETPLKYLIRNVI*DRHRSA
Trigger: CGCTGACCTGTGCCTATCTCAGATCACATTCCTGAT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR GCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGTACCTTCTTGGGGTaGTACTTCTGCAGAAGCACA +
Preference number: 2 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLSTFLG*YFCRST
Trigger: TGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAATATCTTCCTTTGGTaGTGCTGGACGGGAATCAAA +
Preference number: 2 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGNIFLW*CWTGIK
Trigger: TTTGATTCCCGTCCAGCACCACCAAAGGAAGATATT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAAACGGAGAAAGATCTaGCTTCCCATCTCCAAATAT +
Preference number: 2 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGKRRKI*LPISKY
Trigger: ATATTTGGAGATGGGAAGTCAGATCTTTCTCCGTTT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR TCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAACCCAACCCTGTCTTaGAAAGCCAAAACAACAAAA +
Preference number: 2 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLNPTLS*KAKTTK
Trigger: TTTTGTTGTTTTGGCTTTTCAAGACAGGGTTGGGTT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACTTTGCTTTGTTAACTaGGAAACACCTCTCAAATAC +
Preference number: 2 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKLCFVN*ETPLKY
Trigger: GTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp ACTAGCAGTGCATGTCTGAAAAGGGATCCGGAAAGCTaGTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTG +
Preference number: 3 (lower is better)
Translates to: TSSACLKRDPES*SFQLGRGWEGL
Trigger: CAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATCCCTTTTCAGACATGCACTGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR TCA 72 bp GCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTaGTGTACATTATTCCTAGACCCTAAGCCAATGCCA +
Preference number: 3 (lower is better)
Translates to: AALFSWAEAGRD*CTLFLDPKPMP
Trigger: TGGCATTGGCTTAGGGTCTAGGAATAATGTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR TCA 72 bp AAGGTGGCTGTCGGTACAACAGCTACTACCAAGACGTaGTCTGTGACTGCAGGATCTTCACAGGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: KVAVGTTATTKT*SVTAGSSQADV
Trigger: TACATCTGCCTGTGAAGATCCTGCAGTCACAGATCACGTCTTGGTAGTAGCTGTTGTACCGACAGCCACCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp CTATTCACCATTAGTACCTTCTTGGGGTGCTACTTCTaGAGAAGCACAAGTGTTCTGCATTCCCCCAAACCC +
Preference number: 3 (lower is better)
Translates to: LFTISTFLGCYF*RSTSVLHSPKP
Trigger: GGGTTTGGGGGAATGCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp AGATCCATGTTAAACTCAAGAGCTGAAAGCAGCTCTTaGAGGGGCAAGGCTAAAATGAGCAATGCAGCTGAG +
Preference number: 3 (lower is better)
Translates to: RSMLNSRAESSS*RGKAKMSNAAE
Trigger: CTCAGCTGCATTGCTCATTTTAGCCTTGCCCCTGCAAGAGCTGCTTTCAGCTCTTGAGTTTAACATGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 72 bp CTGCAGCTTAACACCTATTCACCATTAGTACCTTCTTaGGGTGCTACTTCTGCAGAAGCACAAGTGTTCTGC +
Preference number: 3 (lower is better)
Translates to: LQLNTYSPLVPS*GATSAEAQVFC
Trigger: GCAGAACACTTGTGCTTCTGCAGAAGTAGCACCCCAAGAAGGTACTAATGGTGAATAGGTGTTAAGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp TCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTaGTGGACGGGAATCAAACTCAGGAAACACAGATAC +
Preference number: 3 (lower is better)
Translates to: SDFPSPNIFLWW*WTGIKLRKHRY
Trigger: GTATCTGTGTTTCCTGAGTTTGATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 72 bp GAAAGATCTGACTTCCCATCTCCAAATATCTTCCTTTaGTGGTGCTGGACGGGAATCAAACTCAGGAAACAC +
Preference number: 3 (lower is better)
Translates to: ERSDFPSPNIFL*WCWTGIKLRKH
Trigger: GTGTTTCCTGAGTTTGATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CAA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTTGCTAAGATGCTTTaGGAAATCACATGGGATACT +
Preference number: 3 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILAKML*EITWDT
Trigger: AGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR TCA 72 bp AAAGCCGATCTCACAAAGCCAAAGAAAACGAGGATGTaGGAGCTCACTCAGAGCTCTAACCAAGAGAATGAA +
Preference number: 3 (lower is better)
Translates to: KADLTKPKKTRM*ELTQSSNQENE
Trigger: TTCATTCTCTTGGTTAGAGCTCTGAGTGAGCTCTCACATCCTCGTTTTCTTTGGCTTTGTGAGATCGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp GCTGAGGTCATCCCAGCATTTTGGTTCTTGCTAAGATaGTTTTGGAAATCACATGGGATACTCCTGAAAGCA +
Preference number: 3 (lower is better)
Translates to: AEVIPAFWFLLR*FWKSHGILLKA
Trigger: TGCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAATGCTGGGATGACCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 72 bp TCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATaGTACTTAGGTCAGAACACAGCACTTGGTAGAAGA +
Preference number: 3 (lower is better)
Translates to: STASKGMFTCPK*YLGQNTALGRR
Trigger: TCTTCTACCAAGTGCTGTGTTCTGACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CCA 72 bp CTCAGCTATGAGTTCAAAGCCAGCCAGAACATCATATaGGTCTCGAAAATACAAACAAAATCCTTAGAATCA +
Preference number: 3 (lower is better)
Translates to: LSYEFKASQNII*VSKIQTKSLES
Trigger: TGATTCTAAGGATTTTGTTTGTATTTTCGAGACCCATATGATGTTCTGGCTGGCTTTGAACTCATAGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR-3UTR CAA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAAAACCCAACCCTGTCTaGAAAAGCCAAAACAACAAA +
Preference number: 3 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKKPNPV*KSQNNK
Trigger: TTTGTTGTTTTGGCTTTTCAAGACAGGGTTGGGTTT...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR GCA 72 bp GTTGGAACCAATCATAGACAGTTTATCACTAAACTTTaGTTTGTTAACTGGGAAACACCTCTCAAATACCTT +
Preference number: 3 (lower is better)
Translates to: VGTNHRQFITKL*FVNWETPLKYL
Trigger: AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCACGGCCTGTGCACTaGACGTCTCTGATGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYPRPVH*TSLMRP
Trigger: TGGCCGCATCAGAGACGTCCAGTGCACAGGCCGTGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYSGSPR*TAPKSR
Trigger: CCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGC +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYSARGV*RGPTHC
Trigger: GCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGCCCACAAAACAAGCTaGGCAGCGTTCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYAHKTS*AAFPGT
Trigger: AGTGCCCGGGAACGCTGCCCAGCTTGTTTTGTGGGC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTGTCGATGGAGCCCTTaGGTGGGGCTGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYCRWSP*VGLECS
Trigger: AGAGCATTCCAGCCCCACTCAAGGGCTCCATCGACA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTCCCACCAGGATGTTTaGGGTCTGGGGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYSHQDV*GLGSQW
Trigger: CCACTGTGACCCCAGACCTCAAACATCCTGGTGGGA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTYTRPG*RCPAAF
Trigger: GAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYSWEKH*ARAVPP
Trigger: GGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYGCSPS*EKHWAR
Trigger: TCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGTTCCTCCCAGCCGGTaGTGCCCGGGGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRVPPSR*CPGLKG
Trigger: GCCTTTGAGCCCCGGGCAGCACCGGCTGGGAGGAAC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCAGCAGCTGTCCTCCTaGGTCCAGTTCCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYQQLSS*VQFLAL
Trigger: CAATGCTAGGAACTGGACCCAGGAGGACAGCTGCTG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGCTCTTGACTGGCTaGTCTCCCAGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTRLLTG*SPRAVA
Trigger: TGCCACAGCCCTGGGAGAGCAGCCAGTCAAGAGCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGAGCCCAGGACGTCTaGGTAGCTGAAGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIRAQDV*VAEAAH
Trigger: GTGGGCGGCTTCAGCTACGCAGACGTCCTGGGCTCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIGRHAH*QSLTAR
Trigger: GCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCATCGCTGACATCATaGCCTGAGCAAAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYPSLTS*PEQRRH
Trigger: ATGCCGTCTTTGCTCAGGCCATGATGTCAGCGATGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCCTGTGGCAGCCCCTATaGACTCCTGGTGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPILWQPL*TPGGSV
Trigger: CACTGAGCCACCAGGAGTGCATAGGGGCTGCCACAG...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCATCCACATGGAGCTaGCCCTTGAAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYPSTWS*PLKNQC
Trigger: ACATTGGTTCTTCAAGGGCCAGCTCCATGTGGATGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACTTCTTCCCATCCACATaGAGCTGGCCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYFFPST*SWPLKN
Trigger: GTTCTTCAAGGGCCAGCTCCATGTGGATGGGAAGAA...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCAGGTCTACAGGGGTTaGAGGTGTCAGGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTQVYRG*RCQGCI
Trigger: GATGCACCCCTGACACCTCCAACCCCTGTAGACCTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCCAGACACAGCAAGCCTaGCAGCAGCCTTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIQTQQA*QQPWGP
Trigger: TGGACCCCAAGGCTGCTGCCAGGCTTGCTGTGTCTG...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCGCTGCACCCTCACCTaGGAGCTTGGCTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRRCTLT*ELGCPH
Trigger: ATGTGGGCAGCCAAGCTCCCAGGTGAGGGTGCAGCG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRPASPV*PSSRHR
Trigger: ACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCCTCTTCTCGCAAGATaGCAACTCGAGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTPLLAR*QLEGRV
Trigger: GACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGGTGTCGGCCATCTTaGGAACAGATACCAGCTATG +
Preference number: 4 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYRCRPS*EQIPAM
Trigger: CATAGCTGGTATCTGTTCCCAAGATGGCCGACACCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGACAAGCCAGGGCTCCTaGGCAACATCATCCCGCACC +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRTSQGS*ATSSRT
Trigger: GGTGCGGGATGATGTTGCTCAGGAGCCCTGGCTTGT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGGAATGTGTCCAACCTaGTGGCCCCAGAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTGMCPT*WPQSRD
Trigger: ATCTCTGCTCTGGGGCCATCAGGTTGGACACATTCC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTTGTCTCCCTGGACCTaGACAGACGAAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTLSPWT*TDEAAP
Trigger: TGGAGCTGCTTCGTCTGTGCAGGTCCAGGGAGACAA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTCCTGGTGGCTCAGTaGTACAACAGCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTLLVAQ*YNSHIS
Trigger: GCTGATGTGGCTGTTGTAGCACTGAGCCACCAGGAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCTCAGCCCGGCTGCCTaGCACACAGAAACAATGTTG +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTLSPAA*HTETML
Trigger: CAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCAGCCCCTGCTGTTGCTaGAAGCAGCTTGGGCGGGTA +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGISPCCC*KQLGRV
Trigger: TACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCT...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGGGGCCACTCCTGTaGGGAAGTTATGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTRGPLL*GSYVSL
Trigger: CAGAGACACATAACTTCCCCACAGGAGTGGCCCCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGTTGGCTGGGAGTCCTaGCCTGGCTCAGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRVGWES*PGSACS
Trigger: AGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAAC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPISGWCK*WLLLGH
Trigger: GTGACCCAGAAGGAGCCATCATTTACACCAGCCGCT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCATCTCGGAGGTCGGTaGCCAGAGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRHLGGR*PEQTPG
Trigger: ACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCAGCATATGCTGAAATaGCCAGTGACCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTQHMLK*PVTQEP
Trigger: AGGCTCCTGGGTCACTGGTCATTTCAGCATATGCTG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGACCTGGGAGCTTGGCTaGCCACATCCAGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRTWELG*PHPVPT
Trigger: AGTGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGCCAGAGCAGAGATCTTaGATGGTCACATCCCACACC +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTPEQRS*MVTSHT
Trigger: GGTGTGGGATGTGACCATGCAAGATCTCTGCTCTGG...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGCCCTTGAGTGGGGCTaGAATGCTCTGAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIALEWG*NALRRE
Trigger: TTCTCTCCTCAGAGCATTCCAGCCCCACTCAAGGGC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTGGGAGTCCTGGCCTaGCTCAGCTTGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILGVLA*LSLLFT
Trigger: AGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCAAACACCAGGTTGGTaGGGGCCTCAGACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIQTPGW*GPQTQQ
Trigger: TTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGGTTAGGGTTGGAGGATaGCTGAGTGCTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTVRVGG*LSAHDG
Trigger: TCCATCATGAGCACTCAGGCATCCTCCAACCCTAAC...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGACATGTCTAAGCCCCTaGTGTTGCTGGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTTCLSP*CCWKQL
Trigger: AAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGGGTTCAGAGGGTACTaGTCTGTGGGGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRGFRGY*SVGFPS
Trigger: TGATGGGAACCCCACAGAGCAGTACCCTCTGAACCC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPISRNSA*VPPPAT
Trigger: TGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCTCCATGCCTGGCTCTaGGGGCTTTTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGILHAWL*GLFAYM
Trigger: CATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGCCTATGCACTCCTGGTaGCTCAGTGCTACAACAGCC +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRPMHSW*LSATTA
Trigger: GGCTGTTGTAGCACTGAGCCACCAGGAGTGCATAGG...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGAGGATGTTTGAGGTCTaGGGTCACAGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTRMFEV*GHSGCD
Trigger: ATCACAGCCACTGTGACCCCAGACCTCAAACATCCT...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTAC +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMSEHQG*PRLHTY
Trigger: GTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CAA 72 bp AGTGTCCTGACTAGCCTGGAACTCACTAGGCTGGCCTaGAACTTACAAAGATCCACCTGCCCCTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: SVLTSLELTRLA*NLQRSTCPYLL
Trigger: TAGGAGATAGGGGCAGGTGGATCTTTGTAAGTTCAAGGCCAGCCTAGTGAGTTCCAGGCTAGTCAGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCA +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRGLEDA*VLMMDS
Trigger: TGAATCCATCATGAGCACTCAGGCATCCTCCAACCC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTTAGGACATTGCCATTaGCACCAGCACCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPILGHCH*HQHPGH
Trigger: ATGACCAGGGTGCTGGTGGCAATGGCAATGTCCTAA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGCTCCTTTAGGACATTaGCATTGCCACCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIAPLGH*HCHQHP
Trigger: AGGGTGCTGGTGGCAATGGCAATGTCCTAAAGGAGC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIFATIY*HTQCCH
Trigger: ATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAGTGCCAGCTACCACGTaGGCCCCACGGCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKVPATT*APRPVH
Trigger: GTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCAC...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESIRAMA*GPASPV
Trigger: CACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAAT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGPGQPC*GSLCHH
Trigger: ATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGGGCCAGCCTGGGCTATAGACTGAAAGCCGATCTCACAAAGCCAAAGAAAACGTTTCTTCCCCTGGATTaGACTGCTGTTGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: RASLGYRLKADLTKPKKTFLPLD*TAVVTE
Trigger: TTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAA...CGTTTTCTTTGGCTTTGTGAGATCGGCTTTCAGTCTATAGCCCAGGCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCACACGATTCATCTTTTaGTCCATTTCCGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPITRFIF*SISGSP
Trigger: GGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCTTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIFLGLH*CPLLAR
Trigger: TCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAA...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCTGTGGTTGCACCGCTaGAGGGGGCCACTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLLWLHR*RGPLLW
Trigger: CCACAGGAGTGGCCCCCTTCAGCGGTGCAACCACAG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAG +
Preference number: 4 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIFSCLQ*LCPQNK
Trigger: CTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGTCCAGCAGGCTCTTaGCTGGCTGCTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLGPAGS*LAALPG
Trigger: CCCTGGGAGAGCAGCCAGTCAAGAGCCTGCTGGACC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGAGAAGAGCCAGCAGCTaGCAGCCATTACACACGCCC +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMRRASS*QPLHTP
Trigger: GGGCGTGTGTAATGGCTGTCAGCTGCTGGCTCTTCT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAACACGTCCAGATGCTaGCCCCTCATGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESNTSRC*PLMARG
Trigger: CCCTCTGGCCATGAGGGGGCAGCATCTGGACGTGTT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGTTCAGGAGAAGAAAATaGCATGTAGCCTTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRFRRRK*HVAFPV
Trigger: CACGGGGAAGGCTACATGGCATTTTCTTCTCCTGAA...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKTARSG*GMSARC
Trigger: ACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGT...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCCAGCACCCTGGTCATaGAGGCTGCAGATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMPAPWS*RLQMGF
Trigger: AAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCAGCAGGCTCTTGACTaGCTGCTCTCCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGQQALD*LLSQGC
Trigger: ACAGCCCTGGGAGAGCAGCCAGTCAAGAGCCTGCTG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGATGCCTGAGTGCTCATaGTGGATTCAAAGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRMPECS*WIQRGN
Trigger: ATTCCCTCTTTGAATCCATCATGAGCACTCAGGCAT...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMSPWVI*KARTRF
Trigger: GAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCT...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCCAGTGCTGCCATCACTaGCACCATAGCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESQCCHH*HHSLTG
Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTG...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCGATGGAGCCCTTGAGTaGGGCTGGAATGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESDGALE*GWNALR
Trigger: CCTCAGAGCATTCCAGCCCCACTCAAGGGCTCCATC...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGTTTTGCCTACATGTTTaGCTTCCATGGACCCAATGC +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRFCLHV*LPWTQC
Trigger: GCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAA...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCGCACACTCAGTTCTaGGGGCAAAGCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMSHTQF*GQSQRL
Trigger: CAGCCTTTGGCTTTGCCCCCAGAACTGAGTGTGCGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMLFPGL*IKGHRS
Trigger: GCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATCACATGGGATACTCCTGAAAGCAATGGGGAAAGAAGGCAACGGAGTCAAAGGGCCTCGATCTTGGCTTaGAGTTCAGGAGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ITWDTPESNGERRQRSQRASILA*SSGEEN
Trigger: ATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGC...CCTTTGACTCCGTTGCCTTCTTTCCCCATTGCTTTCAGGAGTATCCCATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTCCGGCCGCAGGAATTTaGCTTTCTTCCCCTGGATTG +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGPAAGI*LSSPGL
Trigger: CAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGG...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QFITKLCFVNWETPLKYLSNSQQ*QLPRGP
Trigger: GGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGTTCCCATCATCGTCTaGCCAGTGCAGAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGVPIIV*PVQRNQ
Trigger: CTGGTTCCTCTGCACTGGGCAGACGATGATGGGAAC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAGACCTCCACTGTACTaGGGTTCCGCTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESRPPLY*GSAAAL
Trigger: AAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGCCCCTATGCACTCCTaGTGGCTCAGTGCTACAACA +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGAPMHS*WLSATT
Trigger: TGTTGTAGCACTGAGCCACCAGGAGTGCATAGGGGC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTACCAGCTATGCCCCCTaGAGATCCATTGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGTSYAP*RSIGVQ
Trigger: CTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAAGCAGCCACGGGGAGGTaGGAAGAACATCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKAATGR*EEHQRE
Trigger: CTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGC...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGGGCTGGAATGCTCTaGGGAGAGAAGCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLGAGML*GEKLWM
Trigger: CATCCAGAGCTTCTCTCCTCAGAGCATTCCAGCCCC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACATGGAGCTGGCCCTTaGAGAACCAATGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKHGAGP*RTNVGC
Trigger: ACAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTAGGAAGAACTCCTTCTaGGGCATCTTTCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGRKNSF*GIFPST
Trigger: GGTGCTGGGAAAGATGCCTCAGAAGGAGTTCTTCCT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLQRGSA*SRSSWK
Trigger: TTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACTCGGTCTCCATTGCTaGCCTCTTCTCGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKLGLHC*PLLARW
Trigger: CCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCCAAAGTCCAGGTCACTaGTGTTGTCTCCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESQSPGH*CCLPGP
Trigger: AGGTCCAGGGAGACAACACCAGTGACCTGGACTTTG...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAACCCCCAGATTTCCAGTaGATTCAAGGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKPPDFQ*IQGWVT
Trigger: GGTGACCCAACCTTGAATGCACTGGAAATCTGGGGG...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CAA 72 bp GCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTaGGAACCAATCATAGACAGTTTATCACTAAACTTT +
Preference number: 4 (lower is better)
Translates to: AGWVGRLAVHFK*EPIIDSLSLNF
Trigger: AAAGTTTAGTGATAAACTGTCTATGATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR TCA 90 bp ACTTCTGCACTAAGCCATCTTGCCTACTCAGGCTTACAAAAATACTTTCATAAATGCTCACTATTGGACTaGGCCAAGTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: TSALSHLAYSGLQKYFHKCSLLD*AKSKTS
Trigger: GGAGGTCTTTGACTTGGCTCAGTCCAATAGTGAGCA...TTTATGAAAGTATTTTTGTAAGCCTGAGTAGGCAAGATGGCTTAGTGCAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTGTTGCCATAGTCAGATaGTCCATTGCTGGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGVAIVR*SIAGLN
Trigger: ATTGAGGCCAGCAATGGAGCATCTGACTATGGCAAC...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GNQTQETQILGKCSNTQMLTFFP*IALLLS
Trigger: TGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAAGTTCCCAGGATACTaGAAGCTTGGGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLKFPGY*KLGSSQ
Trigger: CTGGGAGGACCCAAGCTTCCAGTATCCTGGGAACTT...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTCCTTGGCCTCGATCTTaGCTTGGAGTTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QFITKLCFVNWETPLKYLPWPRS*LGVQEK
Trigger: CTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGG...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTTGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLWKGLS*PVYIVA
Trigger: TGCTACAATGTACACTGGGCAGCTGAGACCCTTCCA...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCGCTCTCCAAACTTGTTaGCATAGTCAGATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ILVLAKMLLEITWDTPESALQTC*HSQMLH
Trigger: ATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGC...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCAACCTCCAAAGGCCTaGCAAAGTTCCCAGGATACT +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLQPPKA*QSSQDT
Trigger: AGTATCCTGGGAACTTTGCCAGGCCTTTGGAGGTTG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTAAATCCAGCCAGCACTaGCTCTCCAAACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QFITKLCFVNWETPLKYLKSSQH*LSKLVA
Trigger: GGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR GCA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGATTCAAAGAGGGAATaGGCTAGCTTCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLDSKRE*ASFFPS
Trigger: GGATGGGAAGAAGCTAGCGCATTCCCTCTTTGAATC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CCA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTGGGCAGATTATAATCTaGGATGTGCAGGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QFITKLCFVNWETPLKYLGQIII*DVQVSK
Trigger: TTTGGAAACCTGCACATCCCAGATTATAATCTGCCC...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
3UTR CAA 72 bp GAACCAATCATAGACAGTTTATCACTAAACTTTGCTTaGTTAACTGGGAAACACCTCTCAAATACCTTAATC +
Preference number: 4 (lower is better)
Translates to: EPIIDSLSLNFA*LTGKHLSNTLI
Trigger: GATTAAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTGTCTATGATTGGTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp CCACACGGGCAGCACAGAGCCTTCCATCCCTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTACGGTGGCCCATCGGGACTCGAACCG +
Preference number: 5 (lower is better)
Translates to: PHGQHRAFHPSEHQG*PRLHTYGGPSGLEP
Trigger: CGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGGAAGGCTCTGTGCTGCCCGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp CCATCCCTCGGAGCATCAGGGCTGGCCCCGGCTCCACACGTACGGTaGCCCATCGGGACTCGAACCGCCCAGACAGATTGTGGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: PSLGASGLAPAPHVR*PIGTRTAQTDCGGA
Trigger: TGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGGCCTaGCTCAGCTTGCTCTTCACTGGGATCACTTCCCACCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: VAEQEARLCWLGVLA*LSLLFTGITSHPAQ
Trigger: CTGGGCTGGGTGGGAAGTGATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp ACACGTACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATTGTaGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: TRTVAHRDSNRPDRL*RSRRPGCVGWESWP
Trigger: AGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GGACGGGTCCACCAGGTTTACAGGGCACAGAGGCCACAGGAAAGGTaGGCGGCAGGTAGTAGCTGGGCCCTGTCCGCTCCTTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: GRVHQVYRAQRPQER*AAGSSWALSAPSGP
Trigger: AGGGCCTGAAGGAGCGGACAGGGCCCAGCTACTACCTGCCGCCCACCTTTCCTGTGGCCTCTGTGCCCTGTAAACCTGGTGGACCCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 90 bp ACCCAGGAGCCTGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TQEPAPSQCRPGQPC*GSLCHHLLPHPVLP
Trigger: TGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCAGGCTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp AGCCCAGAAGAGCCAGCAGCTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTCGGAATCGGCCCAGCTCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SPEEPAADSHYTRPG*RCPAAFGIGPALPW
Trigger: CCAGGGAAGAGCTGGGCCGATTCCGAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAGCTGCTGGCTCTTCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GAACCGCCCAGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTaGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTGGGATC +
Preference number: 5 (lower is better)
Translates to: EPPRQIVAEQEARLC*LGVLAWLSLLFTGI
Trigger: GATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp GCCGACCCGGGCAGCCATGCTGAGGGAGTCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCATCACTGCCACCATAGCCTCACAGGC +
Preference number: 5 (lower is better)
Translates to: ADPGSHAEGVFATIY*HTQCCHHCHHSLTG
Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp GGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GEVGRTSKGEGRHAH*QSLTARSGCGMSAR
Trigger: CCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp CAGCCACGGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATaGCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: QPRGGGKNIKGRGSP*PLPKPYSPLRVRHE
Trigger: CTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGCCCGGGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: GRSRSGGCSPSWEKH*ARAVPPSRCCPGLK
Trigger: TTTGAGCCCCGGGCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp GGTGTCCGGCCGCCTTCGGAATCGGCCCAGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGCTGCCCAACCTTTAGCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GVRPPSESAQLFPGL*IKGHRSCPTFSRAQ
Trigger: CTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGATTCCGAAGGCGGCCGGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS-3UTR CAA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACGGAGGCCCGGCTGTGTaGGCTGGGAGTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYGGPAV*AGSPGL
Trigger: CAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCC...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp TGCTGCCATCACTGCCACCATAGCCTCACAGGCATCAGCCAGCGCTaGACCCTCACCTGGGAGCTTGGCTGCCCACATCCAGTTCCCACT +
Preference number: 5 (lower is better)
Translates to: CCHHCHHSLTGISQR*TLTWELGCPHPVPT
Trigger: AGTGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGTGAGGGTGCAGCGCTGGCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp TGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTaGCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATGCCCCC +
Preference number: 5 (lower is better)
Translates to: CPLPKPYSPLRVRHE*QVSAILGTDTSYAP
Trigger: GGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp GAGGGTCGCCATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGTCGGCCATCTTGGGAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: EGRHAHCQSLTARSG*GMSARCRPSWEQIP
Trigger: TGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp TTCACTGATATTCGGGCCATGGCCTGGGGTCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGTAGGCCAGCACTCTCGTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: FTDIRAMAWGPASPV*PSSRHRRPALSYLC
Trigger: GCAGAGGTACGAGAGTGCTGGCCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 90 bp GCCATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATaGGTGCCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATGC +
Preference number: 5 (lower is better)
Translates to: AMPTAKALQPAQGAA*VPGVGHLGNRYQLC
Trigger: GCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp GGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTGCCATCACTaGCACCATAGCCTCACAGGCATCAGCCAGCGCTGCACCCTCACC +
Preference number: 5 (lower is better)
Translates to: GVFATIYCHTQCCHH*HHSLTGISQRCTLT
Trigger: GGTGAGGGTGCAGCGCTGGCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp TCGGCCCAGCTCTTCCCTGGCCTGTGGATTAAAGGTCACCGCAGCTaGCCAACCTTTAGCAGAGCCCAGGACGTCTGCGTAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: SAQLFPGLWIKGHRS*PTFSRAQDVCVAEA
Trigger: GGCTTCAGCTACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GGACATTGCCATTGCCACCAGCACCCTGGTCATGGAGGCTGCAGATaGGGTTTCCTCCTGGGGCCTCCACACAAGCCCGGATCACACGAT +
Preference number: 5 (lower is better)
Translates to: GHCHCHQHPGHGGCR*GFLLGPPHKPGSHD
Trigger: ATCGTGTGATCCGGGCTTGTGTGGAGGCCCCAGGAGGAAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGGTGGCAATGGCAATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CCA 90 bp GCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTTaGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ATSARGVCRGPTHCC*ATRPPTERSTLLVR
Trigger: CCTCACCAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp ACAAGGTTCTCGGGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: TRFSGRSRSGGCSPS*EKHWARAVPPSRCC
Trigger: GCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCCCGAGAACCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp TCCTGGTGGCTCAGTGCTACAACAGCCACATCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGCTGTTGGGCAACAAGGCCACCCACA +
Preference number: 5 (lower is better)
Translates to: SWWLSATTATSARGV*RGPTHCCWATRPPT
Trigger: TGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGTAGCACTGAGCCACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp AAAGGTCACCGCAGCTGCCCAACCTTTAGCAGAGCCCAGGACGTCTaGGTAGCTGAAGCCGCCCACAAAGGCCACACCACGGAATGTGTC +
Preference number: 5 (lower is better)
Translates to: KGHRSCPTFSRAQDV*VAEAAHKGHTTECV
Trigger: GACACATTCCGTGGTGTGGCCTTTGTGGGCGGCTTCAGCTACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp CTCAGCTCCTTTAGGACATTGCCATTGCCACCAGCACCCTGGTCATaGAGGCTGCAGATGGGGTTTCCTCCTGGGGCCTCCACACAAGCC +
Preference number: 5 (lower is better)
Translates to: LSSFRTLPLPPAPWS*RLQMGFPPGASTQA
Trigger: GGCTTGTGTGGAGGCCCCAGGAGGAAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGGTGGCAATGGCAATGTCCTAAAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CCA 90 bp CAGGCTCCTCTACTACCACAGCCTTATTCACTGATATTCGGGCCATaGCCTGGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGACACC +
Preference number: 5 (lower is better)
Translates to: QAPLLPQPYSLIFGP*PGVQPRLCGPVPDT
Trigger: GGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAGAGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp CTATGCCCCCTGGAGATCCATTGGGGTTCAGAGGGTACTGCTCTGTaGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: LCPLEIHWGSEGTAL*GSHHRLPSAEEPGP
Trigger: AGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp GTAACGTCGGGTGGTCTCTACCCGATCCACAGCCCTCAGCCCGGCTaGCTGGCACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAA +
Preference number: 5 (lower is better)
Translates to: VTSGGLYPIHSPQPG*LAHRNNVGRCWSRE
Trigger: TTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCGGGTAGAGACCACCCGACGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp ACAACAGCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTaGTGTTGGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TTATSARGVCRGPTH*CWATRPPTERSTLL
Trigger: CAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp ATTGGGGTTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTaGCCAGTGCAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: IGVQRVLLCGVPIIV*PVQRNQALGLDLGL
Trigger: CAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp CAGCAGCTGTCCTCCTGGGTCCAGTTCCTAGCATTGATGAAGAGCTaGAGCCACGGGGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGC +
Preference number: 5 (lower is better)
Translates to: QQLSSWVQFLALMKS*SHGEVGRTSKGEGR
Trigger: GCGACCCTCTCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGCAGCTCTTCATCAATGCTAGGAACTGGACCCAGGAGGACAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GATCCACAGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTaGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: DPQPSARLPGTQKQC*SMLESRNSAWVPPP
Trigger: TGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp CGTCGGGTGGTCTCTACCCGATCCACAGCCCTCAGCCCGGCTGCCTaGCACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAAATTC +
Preference number: 5 (lower is better)
Translates to: RRVVSTRSTALSPAA*HTETMLVDAGVEKF
Trigger: GAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCGGGTAGAGACCACCCGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp TCCTCTACTACCACAGCCTTATTCACTGATATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGACACCGTAGG +
Preference number: 5 (lower is better)
Translates to: SSTTTALFTDIRAMA*GPASPVWPSSRHRR
Trigger: CCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS-3UTR CAA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCCCCTGGAGATCCATaGGGGTTCAGAGGGTACTGC +
Preference number: 5 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYPPGDP*GFRGYC
Trigger: GCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp AGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATaGTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAA +
Preference number: 5 (lower is better)
Translates to: SPQPGCLAHRNNVGR*WSREIQPGSHLQQQ
Trigger: TTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp GGGAAGTTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTaGTGTTGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: GKLCVSAVKTTCLSP*CCWKQLGRVESSGR
Trigger: GCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAACTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp AGCCTGCCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTGCTaGCCTCTTCTCGCAAGATGGCAACTCGAGGGACGGGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: SLPSERHQPFLGLHC*PLLARWQLEGRVHQ
Trigger: CTGGTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 90 bp TTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTGCCCAGTaGAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: FRGYCSVGFPSSSAQ*RGTRPLASILAWSS
Trigger: TGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp AGAAATCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTGGTTaGCCTTCTCCAGGGCAGGCCGACCCTCAGCTAGTATGTCGATGG +
Preference number: 5 (lower is better)
Translates to: RNRGPRSQEPNLAPG*PSPGQADPQLVCRW
Trigger: CCATCGACATACTAGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp CATCAGCCATTTCTCGGTCTCCATTGCTGCCCTCTTCTCGCAAGATaGCAACTCGAGGGACGGGTCCACCAGGTTTACAGGGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: HQPFLGLHCCPLLAR*QLEGRVHQVYRAQR
Trigger: CCTCTGTGCCCTGTAAACCTGGTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 90 bp CCAATGCCGCCACTGAACATGATGGGCTTGATCCACTCACGTCTCTaGCCATCTGGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCC +
Preference number: 5 (lower is better)
Translates to: PMPPLNMMGLIHSRL*PSGSWRPKERANPA
Trigger: GGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATGTTCAGTGGCGGCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp GATTATAATCTGGGATGTGCAGGTTTCCAAAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCCCACGGCCTGTGCACTGGACGTCTC +
Preference number: 5 (lower is better)
Translates to: DYNLGCAGFQSNSQQ*QLPRGPHGLCTGRL
Trigger: GAGACGTCCAGTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCTTTGGAAACCTGCACATCCCAGATTATAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp CAAAGCCTGCCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGATGGCAACTCGAGGGACGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: QSLPSERHQPFLGLH*CPLLARWQLEGRVH
Trigger: GTGGACCCGTCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAAATCGTTaGAGCCAGGAACAAGCCAGGGCTCCTGAGCAACATCATCCCGCA +
Preference number: 5 (lower is better)
Translates to: ESRNSAWVPPPATNR*SQEQARAPEQHHPA
Trigger: TGCGGGATGATGTTGCTCAGGAGCCCTGGCTTGTTCCTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp CCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATGCTaGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAGCAACAAATC +
Preference number: 5 (lower is better)
Translates to: PQPGCLAHRNNVGRC*SREIQPGSHLQQQI
Trigger: GATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp TGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTGCTaGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: CVSAVKTTCLSPCCC*KQLGRVESSGRRNL
Trigger: CAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp GCCACTGAACATGATGGGCTTGATCCACTCACGTCTCTGACCATCTaGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCCAGCACTGG +
Preference number: 5 (lower is better)
Translates to: ATEHDGLDPLTSLTI*KLETQRAGKSSQHW
Trigger: CCAGTGCTGGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATGTTCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp TCCAACACCAGACCGGGCTCTTCCGCAAACAGCACAGGCAATGCATaGATCCCAGGGGCAGGTACATCTACCTCTATCCCACAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SNTRPGSSANSTGNA*IPGAGTSTSIPQFP
Trigger: TGGGAACTGTGGGATAGAGGTAGATGTACCTGCCCCTGGGATCCATGCATTGCCTGTGCTGTTTGCGGAAGAGCCCGGTCTGGTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp GGCCATCTTGGGAACAGATACCAGCTATGCCCCCTGGAGATCCATTaGGGTTCAGAGGGTACTGCTCTGTGGGGTTCCCATCATCGTCTG +
Preference number: 5 (lower is better)
Translates to: GHLGNRYQLCPLEIH*GSEGTALWGSHHRL
Trigger: CAGACGATGATGGGAACCCCACAGAGCAGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS-3UTR CAA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACA +
Preference number: 5 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYRANTR*VRASDT
Trigger: TGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCT...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp TGGCCTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGATCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: WPEQRRHSFSSPWVI*KARTRFSGRSRSGG
Trigger: CCCTCCTGATCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp TTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTaGTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LCVSAVKTTCLSPCC*WKQLGRVESSGRRN
Trigger: ATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp CGGATCACACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCTCCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RITRFIFCSISGSPR*TAPKSRSLVLSPWT
Trigger: GGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS GCA 90 bp TCCTTCAGGCCCTGTTTCTCCTCTATCACACAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAACTTGTTTCCTCCCAGAGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SFRPCFSSITQRGSA*SRSSWKLVSSQRAL
Trigger: AAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAAACAGGGCCTGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp TGTGAAGACAACATGTCTAAGCCCCTGCTGTTGCTGGAAGCAGCTTaGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: CEDNMSKPLLLLEAA*AGRVLRPQEFDFLP
Trigger: GGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp TTCTCCTCTATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTaGAAACTTGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAGGC +
Preference number: 5 (lower is better)
Translates to: FSSITQRGSACSRSS*KLVSSQRALNSPTG
Trigger: GCCTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp TGGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTTaGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAAATGCCATGT +
Preference number: 5 (lower is better)
Translates to: WGSHHRLPSAEEPGP*PRSWLGVQEKKMPC
Trigger: ACATGGCATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 90 bp AGGGCAGCCGAACAGCCACATCAACTTCTTCATCTCCTCAGCCCATaGAAGGGTCTCAGCTGCCCAGTGTACATTGTAGCACAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: RAAEQPHQLLHLLSP*KGLSCPVYIVAQLS
Trigger: ACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAGTTGATGTGGCTGTTCGGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp GGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCACAGAACTTGAGGACATTGTTAGGG +
Preference number: 5 (lower is better)
Translates to: GRVESSGRRNLTFFP*IALLLSQNLRTLLG
Trigger: CCCTAACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp ATCTGGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGCCAGCACTaGCTCTCCAAACTTGTTGCCATAGTCAGATGCTCCATTGCTGGC +
Preference number: 5 (lower is better)
Translates to: IWKLETQRAGKSSQH*LSKLVAIVRCSIAG
Trigger: GCCAGCAATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPISKPLL*LEAAWA
Trigger: CGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp AGAGGGAATGCGCTAGCTTCTTCCCATCCACATGGAGCTGGCCCTTaGAGAACCAATGTCGGCTGTGCTCACTATTGGACTGAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: RGNALASSHPHGAGP*RTNVGCAHYWTEPS
Trigger: ACTTGGCTCAGTCCAATAGTGAGCACAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATGTGGATGGGAAGAAGCTAGCGCATTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp CATCATGGCCTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTaGTATGAAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGATCAG +
Preference number: 5 (lower is better)
Translates to: HHGLSKDGILSAAPG*YERHAQGSREGLDQ
Trigger: CTGATCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAGGCCATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp AGACCTCCACTGTACTGGGGTTCCGCTGCAGCTCTTGAAAGCGCTTaGTATAGAAATCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCT +
Preference number: 5 (lower is better)
Translates to: RPPLYWGSAAALESA*YRNRGPRSQEPNLA
Trigger: AGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATCCGGAAAGCTGCTCTTTTCAGCTGGGCAGAGGCTGGGAGGGACTGATGTACCCACACTCTGAAGTGTaGGCAGTTTCTCTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: DPESCSFQLGRGWEGLMYPHSEV*AVSLVV
Trigger: GACTACAAGAGAAACTGCCAACACTTCAGAGTGTGG...GTACATCAGTCCCTCCCAGCCTCTGCCCAGCTGAAAAGAGCAGCTTTCCGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCATGTCGATGGAGCCCTaGAGTGGGGCTGGAATGCTC +
Preference number: 5 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIMSMEP*SGAGML
Trigger: GAGCATTCCAGCCCCACTCAAGGGCTCCATCGACAT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCTCCAGGTCACTGGTGTaGTCTCCCTGGACCTGCACA +
Preference number: 5 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPISRSLV*SPWTCT
Trigger: TGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGA...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCCCAGGTCTACAGGGGTaGGAGGTGTCAGGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIPGLQG*EVSGVH
Trigger: ATGCACCCCTGACACCTCCAACCCCTGTAGACCTGG...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIGPAGN*FPPRGL
Trigger: GAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACC...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp GTGCATTCAAGGTTGGGTCACCTAGCTGGAAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCACTCAGCTCCTTTAGGACATTGCCAT +
Preference number: 5 (lower is better)
Translates to: VHSRLGHLAGSGWCK*WLLLGHSAPLGHCH
Trigger: ATGGCAATGTCCTAAAGGAGCTGAGTGACCCAGAAGGAGCCATCATTTACACCAGCCGCTTCCAGCTAGGTGACCCAACCTTGAATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp CTAGGCATTCACGATCATCCACTAGTACAATTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAGCTGGGCAGCGTTCCCGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LGIHDHPLVQFSCLQ*LCPQNKLGSVPGHW
Trigger: CCAGTGCCCGGGAACGCTGCCCAGCTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAATTGTACTAGTGGATGATCGTGAATGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp CCACATCAACTTCTTCATCTCCTCAGCCCATGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCACAGCTCAGTCTCCACACTCTGAAG +
Preference number: 5 (lower is better)
Translates to: PHQLLHLLSPWKGLS*PVYIVAQLSLHTLK
Trigger: CTTCAGAGTGTGGAGACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAGTTGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp ACACAGAAACAATGTTGGTCGATGCTGGAGTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACAAATCGTTGGAGCCAGGAACAAGCC +
Preference number: 5 (lower is better)
Translates to: TQKQCWSMLESRNSA*VPPPATNRWSQEQA
Trigger: GGCTTGTTCCTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 90 bp AAATCCAGCCAGCACTGGCTCTCCAAACTTGTTGCCATAGTCAGATaGTCCATTGCTGGCCTCAATAGCAACCTCCAAAGGCCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: KSSQHWLSKLVAIVR*SIAGLNSNLQRPGK
Trigger: TTTGCCAGGCCTTTGGAGGTTGCTATTGAGGCCAGCAATGGAGCATCTGACTATGGCAACAAGTTTGGAGAGCCAGTGCTGGCTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GATGTAGCTGGGTGGGTAGGGCGCCTTGCTGTTCATTTTAAGTTGGAACCAATCATGCTGAGGGAGTCTTaGCCACCATCTACTGCCACA +
Preference number: 5 (lower is better)
Translates to: DVAGWVGRLAVHFKLEPIMLRES*PPSTAT
Trigger: TGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCAT...GATTGGTTCCAACTTAAAATGAACAGCAAGGCGCCCTACCCACCCAGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 90 bp TGTGCTCACTATTGGACTGAGCCAAGTCAAAGACCTCCACTGTACTaGGGTTCCGCTGCAGCTCTTGAAAGCGCTTGGTATAGAAATCGA +
Preference number: 5 (lower is better)
Translates to: CAHYWTEPSQRPPLY*GSAAALESAWYRNR
Trigger: TCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCTTTGACTTGGCTCAGTCCAATAGTGAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp ATTTTGGTTCTTGCTAAGATGCTTTTGGAAATCACATGGGATACTCCTGAAAGCAGCCTGGCAGCAGCCTaGGGGTCCAGCAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ILVLAKMLLEITWDTPESSLAAA*GSSRLL
Trigger: CAAGAGCCTGCTGGACCCCAAGGCTGCTGCCAGGCT...GCTTTCAGGAGTATCCCATGTGATTTCCAAAAGCATCTTAGCAAGAACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp AGATCTGACTTCCCATCTCCAAATATCTTCCTTTGGTGGTGCTGGACGGGAATCGTTCCGCTGCAGCTCTaGAAAGCGCTTGGTATAGAA +
Preference number: 5 (lower is better)
Translates to: RSDFPSPNIFLWWCWTGIVPLQL*KALGIE
Trigger: TTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAAC...GATTCCCGTCCAGCACCACCAAAGGAAGATATTTGGAGATGGGAAGTCAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp CTGTTGTCACAGAACTTGAGGACATTGTTAGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCAAAGAGGGAATGCGCTAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLSQNLRTLLGLEDA*VLMMDSKRECASFF
Trigger: GAAGAAGCTAGCGCATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTGTGACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 90 bp ATTCACGATCATCCACTAGTACAATCTGGAAGCGGCTGGTGTAAATaGTGGCTCCTTCTGGGTCACTCAGCTCCTTTAGGACATTGCCAT +
Preference number: 5 (lower is better)
Translates to: IHDHPLVQSGSGWCK*WLLLGHSAPLGHCH
Trigger: ATGGCAATGTCCTAAAGGAGCTGAGTGACCCAGAAGGAGCCATCATTTACACCAGCCGCTTCCAGATTGTACTAGTGGATGATCGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149703.4
CDS-3UTR CAA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTGGGTCCAGCAGGCTCTaGACTGGCTGCTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: QFITKLCFVNWETPLKYLGSSRL*TGCSPR
Trigger: CCTGGGAGAGCAGCCAGTCAAGAGCCTGCTGGACCC...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCCCAGAGCAGAGATCTaGCATGGTCACATCCCACAC +
Preference number: 5 (lower is better)
Translates to: GNQTQETQILGKCSNTQMPRAEI*HGHIPH
Trigger: GTGTGGGATGTGACCATGCAAGATCTCTGCTCTGGG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: GNQTQETQILGKCSNTQMSGRRN*TFFPWI
Trigger: AATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGA...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QFITKLCFVNWETPLKYLFRVSP*HSSKVQ
Trigger: CTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAA...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GNQTQETQILGKCSNTQMHTIHL*LHFRVS
Trigger: GGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp TATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTAGGTATTTCTCGGTCTCCATaGCTGCCCTCTTCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: YSSTASKGMFTCPKWYLGISRSP*LPSSRK
Trigger: CTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAAT...ACCTAAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp CAGTTTATCACTAAACTTTGCTTTGTTAACTGGGAAACACCTCTCAAATACCTTACATGGAGCTGGCCCTaGAAGAACCAATGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: QFITKLCFVNWETPLKYLTWSWP*KNQCRL
Trigger: CAGCCGACATTGGTTCTTCAAGGGCCAGCTCCATGT...AAGGTATTTGAGAGGTGTTTCCCAGTTAACAAAGCAAAGTTTAGTGATAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTGGCTCTGGGGGCTTTTaGCCTACATGTTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLGSGGF*PTCLAS
Trigger: GGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCC...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp GGGAATCAAACTCAGGAAACACAGATACTAGGCAAGTGTTCTAATACTCAGATGCTGTTGTCACAGAACTaGAGGACATTGTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: GNQTQETQILGKCSNTQMLLSQN*RTLLGL
Trigger: CAACCCTAACAATGTCCTCAAGTTCTGTGACAACAG...CATCTGAGTATTAGAACACTTGCCTAGTATCTGTGTTTCCTGAGTTTGATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTCTTTCTTCCCCTGGATaGCACTGCTGTTGTCACAGA +
Preference number: 5 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLLSSPG*HCCCHR
Trigger: TCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAG...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS-3UTR CAA 90 bp TATATATTCTTCCACAGCATCAAAGGGAATGTTCACATGTCCAAAATGGTACTTTGGATTGCACTGCTGTaGTCACAGAACTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: YIFFHSIKGNVHMSKMVLWIALL*SQNLRT
Trigger: TGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCA...AAGTACCATTTTGGACATGTGAACATTCCCTTTGATGCTGTGGAAGAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp CAGCACAGAGCCTTCCATCCCTCGGAGCATCAGGGCTaGCCCCGGCTCCACACGTACGGTGGCCCATCGGGA +
Preference number: 6 (lower is better)
Translates to: QHRAFHPSEHQG*PRLHTYGGPSG
Trigger: TCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCCGAGGGATGGAAGGCTCTGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 72 bp ACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATaGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: TVAHRDSNRPDR*WRSRRPGCVGW
Trigger: CCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 90 bp TCCACACGTACGGTGGCCCATCGGGACTCGAACCGCCCAGACAGATaGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTGGGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: STRTVAHRDSNRPDR*WRSRRPGCVGWESW
Trigger: CCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp ATTCGGGCCATGGCCTGGGGTCCAGCCTCGCCTGTGTaGCCCAGTTCCAGACACCGTAGGCCAGCACTCTCG +
Preference number: 6 (lower is better)
Translates to: IRAMAWGPASPV*PSSRHRRPALS
Trigger: CGAGAGTGCTGGCCTACGGTGTCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp GGAGCATCAGGGCTGGCCCCGGCTCCACACGTACGGTaGCCCATCGGGACTCGAACCGCCCAGACAGATTGT +
Preference number: 6 (lower is better)
Translates to: GASGLAPAPHVR*PIGTRTAQTDC
Trigger: ACAATCTGTCTGGGCGGTTCGAGTCCCGATGGGCCACCGTACGTGTGGAGCCGGGGCCAGCCCTGATGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 72 bp GAGCCAGCAGCTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCCGGCCGCCTTCGGAATCGGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: EPAADSHYTRPG*RCPAAFGIGPA
Trigger: AGCTGGGCCGATTCCGAAGGCGGCCGGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAGCTGCTGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp AGATCAGGAGGGTGCTCCCCAAGCTGGGAGAAACACTaGGCTAGAGCCGTTCCTCCCAGCCGGTGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: RSGGCSPSWEKH*ARAVPPSRCCP
Trigger: CGGGCAGCACCGGCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp CGAACCGCCCAGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTaGGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTGGGAT +
Preference number: 6 (lower is better)
Translates to: RTAQTDCGGAGGPAV*AGSPGLAQLALHWD
Trigger: ATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCTGGGCGGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 72 bp CCTGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTaGGGGAGTCTTTGCCACCATCTACTGCCACACCCA +
Preference number: 6 (lower is better)
Translates to: PAPSQCRPGQPC*GSLCHHLLPHP
Trigger: TGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp CAGAGGCCACAGGAAAGGTGGGCGGCAGGTAGTAGCTaGGCCCTGTCCGCTCCTTCAGGCCCTGTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: QRPQERWAAGSS*ALSAPSGPVSP
Trigger: AGGAGAAACAGGGCCTGAAGGAGCGGACAGGGCCCAGCTACTACCTGCCGCCCACCTTTCCTGTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp AGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTGGCTaGGAGTCCTGGCCTGGCTCAGCTTGCTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: RLWRSRRPGCVG*ESWPGSACSSL
Trigger: CAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp AGACAGATTGTGGCGGAGCAGGAGGCCCGGCTGTGTTaGCTGGGAGTCCTGGCCTGGCTCAGCTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: RQIVAEQEARLC*LGVLAWLSLLF
Trigger: GAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCCGGGCCTCCTGCTCCGCCACAATCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 90 bp TGCACCGTCTCAGTGCCGACCCGGGCAGCCATGCTGAGGGAGTCTTaGCCACCATCTACTGCCACACCCAGTGCTGCCATCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: CTVSVPTRAAMLRES*PPSTATPSAAITAT
Trigger: GGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCCCGGGTCGGCACTGAGACGGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp GGCTGTGTTGGCTGGGAGTCCTGGCCTGGCTCAGCTTaGTCTTCACTGGGATCACTTCCCACCCAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: GCVGWESWPGSA*SSLGSLPTQPR
Trigger: TCTGGGCTGGGTGGGAAGTGATCCCAGTGAAGAGCAAGCTGAGCCAGGCCAGGACTCCCAGCCAACACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp CATGCCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTaGGGCATGAGTGCCAGGTGTCGGCCATCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: HAHCQSLTARSG*GMSARCRPSWE
Trigger: TTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp TCGAGGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTaGTTGGCCTTCTCCAGGGCAGGCCGACCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SRSQESRAKPSS*LAFSRAGRPSA
Trigger: AGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp GCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTTaGGCAACAAGGCCACCCACAGAGCGATCCACCTTG +
Preference number: 6 (lower is better)
Translates to: ARGVCRGPTHCC*ATRPPTERSTL
Trigger: CAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp CTGCACTTCACATCTCGGAGGTCGGTGACCAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACAGCAAGCCTGGCAGCAGCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: LHFTSRRSVTRANTR*VRASDTASLAAALG
Trigger: CCCCAAGGCTGCTGCCAGGCTTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATGTGAAGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CTGGGATGTGCAGGTTTCCAAAGCAATAGCCAGCAGTaGCAGCTACCACGTGGGCCCCACGGCCTGTGCACT +
Preference number: 6 (lower is better)
Translates to: LGCAGFQSNSQQ*QLPRGPHGLCT
Trigger: AGTGCACAGGCCGTGGGGCCCACGTGGTAGCTGGCACTGCTGGCTATTGCTTTGGAAACCTGCACATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp ACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTaGTGTTGGGCAACAAGGCCACCCACAGAGCGATCC +
Preference number: 6 (lower is better)
Translates to: TSARGVCRGPTH*CWATRPPTERS
Trigger: GGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATGAGTaGCAGGTGTCGGCCATCTTGGGAACAGATACCAGC +
Preference number: 6 (lower is better)
Translates to: PKPYSPLRVRHE*QVSAILGTDTS
Trigger: GCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp GGAAGAACATCAAAGGGAGAGGGTCGCCATGCCCACTaGCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATG +
Preference number: 6 (lower is better)
Translates to: GRTSKGEGRHAH*QSLTARSGCGM
Trigger: CATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp GGAGGTGGGAAGAACATCAAAGGGAGAGGGTCGCCATaGCCACTGCCAAAGCCTTACAGCCCGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GGGKNIKGRGSP*PLPKPYSPLRV
Trigger: CACCCTGAGCGGGCTGTAAGGCTTTGGCAGTGGGCATGGCGACCCTCTCCCTTTGATGTTCTTCCCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp GGTCCCAGGAGTCAAGAGCCAAACCTAGCTCCTGGTTaGCCTTCTCCAGGGCAGGCCGACCCTCAGCTAGTA +
Preference number: 6 (lower is better)
Translates to: GPRSQEPNLAPG*PSPGQADPQLV
Trigger: TACTAGCTGAGGGTCGGCCTGCCCTGGAGAAGGCCAACCAGGAGCTAGGTTTGGCTCTTGACTCCTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp TCGGGAAGGTCTAGATCAGGAGGGTGCTCCCCAAGCTaGGAGAAACACTGGGCTAGAGCCGTTCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: SGRSRSGGCSPS*EKHWARAVPPS
Trigger: GCTGGGAGGAACGGCTCTAGCCCAGTGTTTCTCCCAGCTTGGGGAGCACCCTCCTGATCTAGACCTTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp CCGCCTTCGGAATCGGCCCAGCTCTTCCCTGGCCTGTaGATTAAAGGTCACCGCAGCTGCCCAACCTTTAGC +
Preference number: 6 (lower is better)
Translates to: PPSESAQLFPGL*IKGHRSCPTFS
Trigger: GCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAGCTGGGCCGATTCCGAAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 72 bp AGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTaGGGCAACAAGGCCACCCACAGAGCGATCCACCTT +
Preference number: 6 (lower is better)
Translates to: SQRSLQGSDTLL*GNKATHRAIHL
Trigger: AAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp CGATCCACAGCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTaGGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: RSTALSPAAWHTETM*VDAGVEKFSLGPTS
Trigger: GGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGCTGTGGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp AGCCACATCAGCCAGAGGAGTCTGCAGGGGTCCGACACACTGCTGTaGGGCAACAAGGCCACCCACAGAGCGATCCACCTTGTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: SHISQRSLQGSDTLL*GNKATHRAIHLVGE
Trigger: CTCACCAACAAGGTGGATCGCTCTGTGGGTGGCCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 72 bp ACTGCCAAAGCCTTACAGCCCGCTCAGGGTGCGGCATaGGTGCCAGGTGTCGGCCATCTTGGGAACAGATAC +
Preference number: 6 (lower is better)
Translates to: TAKALQPAQGAA*VPGVGHLGNRY
Trigger: GTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGAGCGGGCTGTAAGGCTTTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp GGCAGCCATGCTGAGGGAGTCTTTGCCACCATCTACTaGCACACCCAGTGCTGCCATCACTGCCACCATAGC +
Preference number: 6 (lower is better)
Translates to: GSHAEGVFATIY*HTQCCHHCHHS
Trigger: GCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCCCTCAGCATGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp TACTGCTCTGTGGGGTTCCCATCATCGTCTGCCCAGTaGAGAGGAACCAGGCCCTTGGCCTCGATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: YCSVGFPSSSAQ*RGTRPLASILA
Trigger: AGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCACAGAGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp GGTCTCCCCGTTGCACAGCTCCAAAGTCCAGGTCACTaGTGTTGTCTCCCTGGACCTGCACAGACGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GLPVAQLQSPGH*CCLPGPAQTKQ
Trigger: CTGCTTCGTCTGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CCA 72 bp ACCACAGCCTTATTCACTGATATTCGGGCCATGGCCTaGGGTCCAGCCTCGCCTGTGTGGCCCAGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: TTALFTDIRAMA*GPASPVWPSSR
Trigger: TCTGGAACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp TCAGGGTGCGGCATGAGTGCCAGGTGTCGGCCATCTTaGGAACAGATACCAGCTATGCCCCCTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: SGCGMSARCRPS*EQIPAMPPGDP
Trigger: TGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGGCACTCATGCCGCACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 72 bp CCCCGTTGCACAGCTCCAAAGTCCAGGTCACTGGTGTaGTCTCCCTGGACCTGCACAGACGAAGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PRCTAPKSRSLV*SPWTCTDEAAP
Trigger: TGGAGCTGCTTCGTCTGTGCAGGTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CAA 72 bp ACATCTCGGAGGTCGGTGACCAGAGCAAACACCAGGTaGGTGAGGGCCTCAGACACAGCAAGCCTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: TSRRSVTRANTR*VRASDTASLAA
Trigger: TGCTGCCAGGCTTGCTGTGTCTGAGGCCCTCACCAACCTGGTGTTTGCTCTGGTCACCGACCTCCGAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp TCCTCCTGGGGCCTCCACACAAGCCCGGATCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCCCCGTTGCACAGCTCCAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: SSWGLHTSPDHTIHL*LHFRVSPLHSSKVQ
Trigger: CTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGCCCCAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS GCA 72 bp CCCGGCTGCCTGGCACACAGAAACAATGTTGGTCGATaGTGGAGTCGAGAAATTCAGCCTGGGTCCCACCTC +
Preference number: 6 (lower is better)
Translates to: PGCLAHRNNVGR*WSREIQPGSHL
Trigger: GAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp TCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTTaGTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: SAVKTTCLSPCC*WKQLGRVESSG
Trigger: GCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp TGTCGCACACTCAGTTCTGGGGGCAAAGCCAAAGGCTaGAGCACAGGGGGTTTCCTCTGGAGGAAGAACTCC +
Preference number: 6 (lower is better)
Translates to: CRTLSSGGKAKG*STGGFLWRKNS
Trigger: GGAGTTCTTCCTCCAGAGGAAACCCCCTGTGCTGCAGCCTTTGGCTTTGCCCCCAGAACTGAGTGTGCGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CTCAGTGCTACAACAGCCACATCAGCCAGAGGAGTCTaGAGGGGTCCGACACACTGCTGTTGGGCAACAAGG +
Preference number: 6 (lower is better)
Translates to: LSATTATSARGV*RGPTHCCWATR
Trigger: CCTTGTTGCCCAACAGCAGTGTGTCGGACCCCTGCAGACTCCTCTGGCTGATGTGGCTGTTGTAGCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp GGAGTCTTTGCCACCATCTACTGCCACACCCAGTGCTaGCATCACTGCCACCATAGCCTCACAGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: GVFATIYCHTQC*HHCHHSLTGIS
Trigger: GCTGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCACTGGGTGTGGCAGTAGATGGTGGCAAAGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CTCTTCCCTGGCCTGTGGATTAAAGGTCACCGCAGCTaGCCAACCTTTAGCAGAGCCCAGGACGTCTGCGTA +
Preference number: 6 (lower is better)
Translates to: LFPGLWIKGHRS*PTFSRAQDVCV
Trigger: TACGCAGACGTCCTGGGCTCTGCTAAAGGTTGGGCAGCTGCGGTGACCTTTAATCCACAGGCCAGGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp CCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTTaGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PSARLPGTQKQC*SMLESRNSAWV
Trigger: GACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp AACATGTCTAAGCCCCTGCTGTTGCTGGAAGCAGCTTaGGCGGGTAGAGTCCTCCGGCCGCAGGAATTTGAC +
Preference number: 6 (lower is better)
Translates to: NMSKPLLLLEAA*AGRVLRPQEFD
Trigger: GTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp TCCCAGCACCCAGTCAAGGTCCAGGTCTACAGGGGTTaGAGGTGTCAGGGGTGCATCTCCCTGACCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SQHPVKVQVYRG*RCQGCISLTSF
Trigger: AAAACTGGTCAGGGAGATGCACCCCTGACACCTCCAACCCCTGTAGACCTGGACCTTGACTGGGTGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp CTACTACCACAGCCTTATTCACTGATATTCGGGCCATaGCCTGGGGTCCAGCCTCGCCTGTGTGGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: LLPQPYSLIFGP*PGVQPRLCGPV
Trigger: AACTGGGCCACACAGGCGAGGCTGGACCCCAGGCCATGGCCCGAATATCAGTGAATAAGGCTGTGGTAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 72 bp GCCCTCAGCCCGGCTGCCTGGCACACAGAAACAATGTaGGTCGATGCTGGAGTCGAGAAATTCAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: ALSPAAWHTETM*VDAGVEKFSLG
Trigger: ACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCCGGGCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp CTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: LCCEDNMSKPLL*LEAAWAGRVLR
Trigger: CCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp GGCCTCCACACAAGCCCGGATCACACGATTCATCTTTaGCTCCATTTCCGGGTCTCCCCGTTGCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: GLHTSPDHTIHL*LHFRVSPLHSS
Trigger: GGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CAA 72 bp TTCCCAGCACCCAGTCAAGGTCCAGGTCTACAGGGGTaGGAGGTGTCAGGGGTGCATCTCCCTGACCAGTTT +
Preference number: 6 (lower is better)
Translates to: FPAPSQGPGLQG*EVSGVHLPDQF
Trigger: AAACTGGTCAGGGAGATGCACCCCTGACACCTCCAACCCCTGTAGACCTGGACCTTGACTGGGTGCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp GTTATGTGTCTCTGCTGTGAAGACAACATGTCTAAGCCCCTGCTGTaGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAA +
Preference number: 6 (lower is better)
Translates to: VMCLCCEDNMSKPLL*LEAAWAGRVLRPQE
Trigger: TTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCAACAGCAGGGGCTTAGACATGTTGTCTTCACAGCAGAGACACATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp GTGGGGTTCCCATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTaGGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAAATGCCATG +
Preference number: 6 (lower is better)
Translates to: VGFPSSSAQCRGTRP*ASILAWSSGEENAM
Trigger: CATGGCATTTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATGGGAACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS TCA 72 bp CGCCCACAAAGGCCACACCACGGAATGTGTCCAACCTaGTGGCCCCAGAGCAGAGATCTTGCATGGTCACAT +
Preference number: 6 (lower is better)
Translates to: RPQRPHHGMCPT*WPQSRDLAWSH
Trigger: ATGTGACCATGCAAGATCTCTGCTCTGGGGCCATCAGGTTGGACACATTCCGTGGTGTGGCCTTTGTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp GCCTCCACACAAGCCCGGATCACACGATTCATCTTTTaGTCCATTTCCGGGTCTCCCCGTTGCACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ASTQARITRFIF*SISGSPRCTAP
Trigger: TGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGGGCTTGTGTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS GCA 72 bp CCAGGTGTCGGCCATCTTGGGAACAGATACCAGCTATaGCCCCTGGAGATCCATTGGGGTTCAGAGGGTACT +
Preference number: 6 (lower is better)
Translates to: PGVGHLGNRYQL*PLEIHWGSEGT
Trigger: AGTACCCTCTGAACCCCAATGGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp GGCTGCCTGGCACACAGAAACAATGTTGGTCGATGCTaGAGTCGAGAAATTCAGCCTGGGTCCCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: GCLAHRNNVGRC*SREIQPGSHLQ
Trigger: CTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTGTTTCTGTGTGCCAGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp CAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATTGCACTGCTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: QLGRVESSGRRN*TFFPWIALLLS
Trigger: TGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp AGCGTGGCTCTGCCTGCAGTAGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAG +
Preference number: 6 (lower is better)
Translates to: SVALPAVGPAGN*FPPRGLLTPQQ
Trigger: CTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 90 bp TGCTGGAAGCAGCTTGGGCGGGTAGAGTCCTCCGGCCGCAGGAATTaGACTTTCTTCCCCTGGATTGCACTGCTGTTGTCACAGAACTTG +
Preference number: 6 (lower is better)
Translates to: CWKQLGRVESSGRRN*TFFPWIALLLSQNL
Trigger: CAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTCTACCCGCCCAAGCTGCTTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp CCGGATCACACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCTCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: PDHTIHLLLHFRVSP*HSSKVQVTGVVSLD
Trigger: GTCCAGGGAGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGTGTGATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS CAA 90 bp CTATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTGGAAACTaGTTTCCTCCCAGAGGGCTCTTAACTCCCCAACAGGCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: LSHSVALPAVGPAGN*FPPRGLLTPQQAPL
Trigger: TAGAGGAGCCTGTTGGGGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp CCTTTACAACCTCCATGCCTGGCTCTGGGGGCTTTTTaGCTACATGTTTGGCTTCCATGGACCCAATGCCGC +
Preference number: 6 (lower is better)
Translates to: PLQPPCLALGAF*LHVWLPWTQCR
Trigger: GCGGCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CCCTGTTTCTCCTCTATCACACAGCGTGGCTCTGCCTaGAGTAGGTCCAGCTGGAAACTTGTTTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PCFSSITQRGSA*SRSSWKLVSSQ
Trigger: CTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGATAGAGGAGAAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS GCA 72 bp TCCTCCTGGGTCCAGTTCCTAGCATTGATGAAGAGCTaGAGCCACGGGGAGGTGGGAAGAACATCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: SSWVQFLALMKS*SHGEVGRTSKG
Trigger: TCCCTTTGATGTTCTTCCCACCTCCCCGTGGCTGCAGCTCTTCATCAATGCTAGGAACTGGACCCAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp CATGATGGGCTTGATCCACTCACGTCTCTGACCATCTaGAAGCTGGAGACCCAAAGAGCGGGCAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: HDGLDPLTSLTI*KLETQRAGKSS
Trigger: GCTGGATTTGCCCGCTCTTTGGGTCTCCAGCTTCCAGATGGTCAGAGACGTGAGTGGATCAAGCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp ATCACACAGCGTGGCTCTGCCTGCAGTAGGTCCAGCTaGAAACTTGTTTCCTCCCAGAGGGCTCTTAACTCC +
Preference number: 6 (lower is better)
Translates to: ITQRGSACSRSS*KLVSSQRALNS
Trigger: GGAGTTAAGAGCCCTCTGGGAGGAAACAAGTTTCCAGCTGGACCTACTGCAGGCAGAGCCACGCTGTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp CATCATCGTCTGCCCAGTGCAGAGGAACCAGGCCCTTaGCCTCGATCTTGGCTTGGAGTTCAGGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: HHRLPSAEEPGP*PRSWLGVQEKK
Trigger: TTTCTTCTCCTGAACTCCAAGCCAAGATCGAGGCCAAGGGCCTGGTTCCTCTGCACTGGGCAGACGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CAA 72 bp TCCATGCCTGGCTCTGGGGGCTTTTTGCCTACATGTTaGGCTTCCATGGACCCAATGCCGCCACTGAACATG +
Preference number: 6 (lower is better)
Translates to: SMPGSGGFLPTC*ASMDPMPPLNM
Trigger: CATGTTCAGTGGCGGCATTGGGTCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 72 bp CTGAGCAAAGACGGCATTCTTTCAGCAGCCCCTGGGTaGTATGAAAGGCACGCACAAGGTTCTCGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: LSKDGILSAAPG*YERHAQGSREG
Trigger: ACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CTTCTTCATCTCCTCAGCCCATGGAAGGGTCTCAGCTaGCCAGTGTACATTGTAGCACAGCTCAGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LLHLLSPWKGLS*PVYIVAQLSLH
Trigger: GTGGAGACTGAGCTGTGCTACAATGTACACTGGGCAGCTGAGACCCTTCCATGGGCTGAGGAGATGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCCATTaGTGCCCTCTTCTCGCAAGATGGCAACTCGAGGGA +
Preference number: 6 (lower is better)
Translates to: PSERHQPFLGLH*CPLLARWQLEG
Trigger: TCCCTCGAGTTGCCATCTTGCGAGAAGAGGGCAGCAATGGAGACCGAGAAATGGCTGATGCCTTTCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp CAATGTTGGTCGATGCTGGAGTCGAGAAATTCAGCCTaGGTCCCACCTCCAGCAACAAATCGTTGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: QCWSMLESRNSA*VPPPATNRWSQ
Trigger: CTGGCTCCAACGATTTGTTGCTGGAGGTGGGACCCAGGCTGAATTTCTCGACTCCAGCATCGACCAACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp CTGTACTGGGGTTCCGCTGCAGCTCTTGAAAGCGCTTaGTATAGAAATCGAGGTCCCAGGAGTCAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: LYWGSAAALESA*YRNRGPRSQEP
Trigger: TGGCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 90 bp AGCCAAGTCAAAGACCTCCACTGTACTGGGGTTCCGCTGCAGCTCTaGAAAGCGCTTGGTATAGAAATCGAGGTCCCAGGAGTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SQVKDLHCTGVPLQL*KALGIEIEVPGVKS
Trigger: GCTCTTGACTCCTGGGACCTCGATTTCTATACCAAGCGCTTTCAAGAGCTGCAGCGGAACCCCAGTACAGTGGAGGTCTTTGACTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 72 bp CAAAGACGGCATTCTTTCAGCAGCCCCTGGGTGATATaGAAGGCACGCACAAGGTTCTCGGGAAGGTCTAGA +
Preference number: 6 (lower is better)
Translates to: QRRHSFSSPWVI*KARTRFSGRSR
Trigger: TCTAGACCTTCCCGAGAACCTTGTGCGTGCCTTTCATATCACCCAGGGGCTGCTGAAAGAATGCCGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTTaGACAGCTCCAAAGTCCAGGTCACTGGTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: RFIFCSISGSPR*TAPKSRSLVLS
Trigger: AGACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS GCA 72 bp GAGATCTTGCATGGTCACATCCCACACCTCAAAGCCTaGCAAGTGAAAGGCATCAGCCATTTCTCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: EILHGHIPHLKA*QVKGISHFSVS
Trigger: GGAGACCGAGAAATGGCTGATGCCTTTCACTTGGCAGGCTTTGAGGTGTGGGATGTGACCATGCAAGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000152964.3
CDS CCA 72 bp GAGTCCTCCGGCCGCAGGAATTTGACTTTCTTCCCCTaGATTGCACTGCTGTTGTCACAGAACTTGAGGACA +
Preference number: 6 (lower is better)
Translates to: ESSGRRNLTFFP*IALLLSQNLRT
Trigger: TGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp AGGACCTCCAACCTTTACAACCTCCATGCCTGGCTCTaGGGGCTTTTTGCCTACATGTTTGGCTTCCATGGA +
Preference number: 6 (lower is better)
Translates to: RTSNLYNLHAWL*GLFAYMFGFHG
Trigger: TCCATGGAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGGTTGGAGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp AAGCAAATGACCTTTCCCACCAGGATGTTTGAGGTCTaGGGTCACAGTGGCTGTGATGTCTGGACAGACAGC +
Preference number: 6 (lower is better)
Translates to: KQMTFPTRMFEV*GHSGCDVWTDS
Trigger: GCTGTCTGTCCAGACATCACAGCCACTGTGACCCCAGACCTCAAACATCCTGGTGGGAAAGGTCATTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp ACGATTCATCTTTTGCTCCATTTCCGGGTCTCCCCGTaGCACAGCTCCAAAGTCCAGGTCACTGGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: TIHLLLHFRVSP*HSSKVQVTGVV
Trigger: GACAACACCAGTGACCTGGACTTTGGAGCTGTGCAACGGGGAGACCCGGAAATGGAGCAAAAGATGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021282.12
ENSMUST00000149703.4
CDS TCA 72 bp CACGATCATCCACTAGTACAATTCTCTTGTCTCCAGTaGTTGTGCCCACAAAACAAGCTGGGCAGCGTTCCC +
Preference number: 6 (lower is better)
Translates to: HDHPLVQFSCLQ*LCPQNKLGSVP
Trigger: GGGAACGCTGCCCAGCTTGTTTTGTGGGCACAATCACTGGAGACAAGAGAATTGTACTAGTGGATGATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp CTCCGGCCGCAGGAATTTGACTTTCTTCCCCTGGATTaGACTGCTGTTGTCACAGAACTTGAGGACATTGTT +
Preference number: 6 (lower is better)
Translates to: LRPQEFDFLPLD*TAVVTELEDIV
Trigger: AACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCTGCGGCCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CCA 72 bp ATAAACAGGACCTCCAACCTTTACAACCTCCATGCCTaGCTCTGGGGGCTTTTTGCCTACATGTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: INRTSNLYNLHA*LWGLFAYMFGF
Trigger: GAAGCCAAACATGTAGGCAAAAAGCCCCCAGAGCCAGGCATGGAGGTTGTAAAGGTTGGAGGTCCTGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS TCA 72 bp CAGAACTTGAGGACATTGTTAGGGTTGGAGGATGCCTaGGTGCTCATGATGGATTCAAAGAGGGAATGCGCT +
Preference number: 6 (lower is better)
Translates to: QNLRTLLGLEDA*VLMMDSKRECA
Trigger: AGCGCATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS GCA 72 bp GTCACAGAACTTGAGGACATTGTTAGGGTTGGAGGATaGCTGAGTGCTCATGATGGATTCAAAGAGGGAATG +
Preference number: 6 (lower is better)
Translates to: VTELEDIVRVGG*LSAHDGFKEGM
Trigger: CATTCCCTCTTTGAATCCATCATGAGCACTCAGGCATCCTCCAACCCTAACAATGTCCTCAAGTTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12
CDS CAA 72 bp AGGAATTTGACTTTCTTCCCCTGGATTGCACTGCTGTaGTCACAGAACTTGAGGACATTGTTAGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: RNLTFFPWIALL*SQNLRTLLGLE
Trigger: CTCCAACCCTAACAATGTCCTCAAGTTCTGTGACAACAGCAGTGCAATCCAGGGGAAGAAAGTCAAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021282.12