Pregenerated sensors for PEX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020003Ensembl transcript IDs: ENSMUST00000020182.16, ENSMUST00000166511.9
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAAGCTCAGTGCAAAATGGAGGACCCCCTTTCTCAGCAGGGCTTaGCCCTCTCCAGTGACCTTCTCTGTCTGGAGAGTGTCTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: PKLSAKWRTPFLSRA*PSPVTFSVWRVSLS Trigger: GCTTAGAGACACTCTCCAGACAGAGAAGGTCACTGGAGAGGGGCAAGCCCTGCTGAGAAAGGGGGTCCTCCATTTTGCACTGAGCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | CAAGAAGGGTCACTGCCTCAGTCACACTGTCCTGTCCCAGCAGGTTaGCAGGCAGCCTGGAAGGCAGATAAGATGGATGCTAACAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QEGSLPQSHCPVPAG*QAAWKADKMDANRW Trigger: CCACCTGTTAGCATCCATCTTATCTGCCTTCCAGGCTGCCTGTCAACCTGCTGGGACAGGACAGTGTGACTGAGGCAGTGACCCTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | GTCCTGTCCCAGCAGGTTGACAGGCAGCCTGGAAGGCAGATAAGATaGATGCTAACAGGTGGTCAGGAGATTTGTGCTGATGTCCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: VLSQQVDRQPGRQIR*MLTGGQEICADVPQ Trigger: CTGCGGGACATCAGCACAAATCTCCTGACCACCTGTTAGCATCCATCTTATCTGCCTTCCAGGCTGCCTGTCAACCTGCTGGGACAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | AACATGCTTCATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTaGGTCCTCAGACCGCGGGCACTGAGCTGCATAGCTGACCATGTT | + |
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Preference number: 1 (lower is better) Translates to: NMLHVFYMPGLVMTV*VLRPRALSCIADHV Trigger: AACATGGTCAGCTATGCAGCTCAGTGCCCGCGGTCTGAGGACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATGAAGCATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | CAACAACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTaGTGGCAAGAAGGGTCACTGCCTCAGTCACACTGTCCTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QQQQTLHMWTCYTLP*WQEGSLPQSHCPVP Trigger: TGGGACAGGACAGTGTGACTGAGGCAGTGACCCTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | ACACACTTGTTATCTCAGCACTGGGGAGGGCAAGATTCACCCAGGTaGATGAGGTCCAGGCCTTACCAGCCAACTAACTTAGCCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: THLLSQHWGGQDSPR*MRSRPYQPTNLAFL Trigger: AAGGAAGGCTAAGTTAGTTGGCTGGTAAGGCCTGGACCTCATCCACCTGGGTGAATCTTGCCCTCCCCAGTGCTGAGATAACAAGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | ACAAACTCAGCTCCCAGCACTGTCCAGCTAACAGCTCAGCAATCCTaGGAGAATGCCACTGAGCATATATGCAGGCAAATGTGGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: TNSAPSTVQLTAQQS*ENATEHICRQMWHS Trigger: TGAGTGCCACATTTGCCTGCATATATGCTCAGTGGCATTCTCTCAGGATTGCTGAGCTGTTAGCTGGACAGTGCTGGGAGCTGAGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | GAAAGAAAATGGGTTCACAGGCTCATGGGAGGGAGCTCCAGTGCGTaGAAGCAGGAGGCAGCCAGTATTCAGTTCATAAGCACAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: ERKWVHRLMGGSSSA*KQEAASIQFISTEV Trigger: AACTTCTGTGCTTATGAACTGAATACTGGCTGCCTCCTGCTTTCACGCACTGGAGCTCCCTCCCATGAGCCTGTGAACCCATTTTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | GATGACAGTCTGAGTCCTCAGACCGCGGGCACTGAGCTGCATAGCTaGCCATGTTTTCCATCTATGAATCTGCAAAGCTTAGAAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: DDSLSPQTAGTELHS*PCFPSMNLQSLEAN Trigger: GTTTGCTTCTAAGCTTTGCAGATTCATAGATGGAAAACATGGTCAGCTATGCAGCTCAGTGCCCGCGGTCTGAGGACTCAGACTGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | AAGGAAAAGCTGAACGAAACTCCAGTCACAACTGTAAGGAAGAGCTaGGTTTCCCTGTTCACCCCTGCCCTCTTGTTAAACAATGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KEKLNETPVTTVRKS*VSLFTPALLLNNVH Trigger: GTGGACATTGTTTAACAAGAGGGCAGGGGTGAACAGGGAAACTCAGCTCTTCCTTACAGTTGTGACTGGAGTTTCGTTCAGCTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | CCAAACATGTCTGGAAGAGAAAGACTACCACCCCAGCCTGTCTACTaGTCTTTAAGAGTTCTTTATAAATTCTGGATACCGGGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: PNMSGRERLPPQPVY*SLRVLYKFWIPGLG Trigger: CCCCAGCCCCGGTATCCAGAATTTATAAAGAACTCTTAAAGATCAGTAGACAGGCTGGGGTGGTAGTCTTTCTCTTCCAGACATGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR GCA 90 bp | CTGCCTCTGCTTCCCAAGGCCTGGCATTATAAATGTGTGAAACCATaGTTAGCTAACAGAGAGAAGTCCTGGGTCCAGTACCTAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: LPLLPKAWHYKCVKP*LANREKSWVQYLKR Trigger: TCTTTTTAGGTACTGGACCCAGGACTTCTCTCTGTTAGCTAAGCATGGTTTCACACATTTATAATGCCAGGCCTTGGGAAGCAGAGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR GCA 90 bp | TCCAGTCACAACTGTAAGGAAGAGCTGAGTTTCCCTGTTCACCCCTaGCCTCTTGTTAAACAATGTCCACTTCAAAAGGAGCTAGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: SSHNCKEELSFPVHP*PLVKQCPLQKELVL Trigger: CAACACTAGCTCCTTTTGAAGTGGACATTGTTTAACAAGAGGGCAGGGGTGAACAGGGAAACTCAGCTCTTCCTTACAGTTGTGACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | TTTGGCCCAGTCAGCGGCAAGTTACAGAACTCTGTGAATGCATTCTaGCTCCTCTTGGTCTCAAACTCTGCTTCTCAACTTAGGTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: FGPVSGKLQNSVNAF*LLLVSNSASQLRLF Trigger: AAACAACCTAAGTTGAGAAGCAGAGTTTGAGACCAAGAGGAGCCAGAATGCATTCACAGAGTTCTGTAACTTGCCGCTGACTGGGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | CATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAATATGATATaGTGGCACACACTTGTTATCTCAGCACTGGGGAGGGCAAGATTC | + |
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Preference number: 1 (lower is better) Translates to: HVDLSLVPRTHVNMI*WHTLVISALGRARF Trigger: GAATCTTGCCCTCCCCAGTGCTGAGATAACAAGTGTGTGCCATCATATCATATTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | ATCACTGAGTTCCAGACCACTGACAGACTCTGTAAAATACCAAGGTaGAGGTTATCCTCTAGCTTGCACATACACTGTACATACACGTGC | + |
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Preference number: 1 (lower is better) Translates to: ITEFQTTDRLCKIPR*RLSSSLHIHCTYTC Trigger: GCACGTGTATGTACAGTGTATGTGCAAGCTAGAGGATAACCTCCACCTTGGTATTTTACAGAGTCTGTCAGTGGTCTGGAACTCAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR TCA 90 bp | AAAGGAGGTGCTAGGGACATTTTGCTGCTCTTGAGTTTTGTTTGTTaGAACAGGCTCTCACTTTGTAGTCCAGTGTACCTCAGACTCACT | + |
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Preference number: 1 (lower is better) Translates to: KGGARDILLLLSFVC*NRLSLCSPVYLRLT Trigger: AGTGAGTCTGAGGTACACTGGACTACAAAGTGAGAGCCTGTTTCAACAAACAAAACTCAAGAGCAGCAAAATGTCCCTAGCACCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | CCATGTTTTCCATCTATGAATCTGCAAAGCTTAGAAGCAAACCTTTaGCCCAGTCAGCGGCAAGTTACAGAACTCTGTGAATGCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: PCFPSMNLQSLEANL*PSQRQVTELCECIL Trigger: CAGAATGCATTCACAGAGTTCTGTAACTTGCCGCTGACTGGGCCAAAGGTTTGCTTCTAAGCTTTGCAGATTCATAGATGGAAAACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | AGTCTTGGTGACCAATGCAACATAGCAGAAACAAGCATGTCACTCTaGAAGCTTCAGTCTTGGCTTTTCTCTTTAGCACTTCTAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLGDQCNIAETSMSL*KLQSWLFSLALLGR Trigger: CCTTCCTAGAAGTGCTAAAGAGAAAAGCCAAGACTGAAGCTTCCAGAGTGACATGCTTGTTTCTGCTATGTTGCATTGGTCACCAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | GGCTGTGGTTATGTGTGTTCATGTTTGGGTCTAAGGATCTACATGTaGTTTTGCAACAGCTGGCTGTTTTCATTACTATGGCTCTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: GCGYVCSCLGLRIYM*FCNSWLFSLLWLCD Trigger: ATCACAGAGCCATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACACACATAACCACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | GCTGGCTGTTTTCATTACTATGGCTCTGTGATATTGCTTAGAACCTaGTATGGTAATCTCTTTAGGGCTGTTCTTTTTGCTCAGGACTAC | + |
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Preference number: 1 (lower is better) Translates to: AGCFHYYGSVILLRT*YGNLFRAVLFAQDY Trigger: GTAGTCCTGAGCAAAAAGAACAGCCCTAAAGAGATTACCATACCAGGTTCTAAGCAATATCACAGAGCCATAGTAATGAAAACAGCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR GCA 90 bp | CCATCAGCGAGGAAGAACATTTTGAAACATAGCAAACATTTGCTTTaGGACTTCTGTGAACTCTCCATTGGTATCCTGTCTACTTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: PSARKNILKHSKHLL*DFCELSIGILSTFV Trigger: CACAAAAGTAGACAGGATACCAATGGAGAGTTCACAGAAGTCGCAAAGCAAATGTTTGCTATGTTTCAAAATGTTCTTCCTCGCTGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR GCA 90 bp | CTGAACAAATCAGCCAAGCCATTTCTGATTCCTGACTACTGGAATTaGAATATAGCAAGACAATGCATGTGGCTCTCAAATACATACCCT | + |
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Preference number: 1 (lower is better) Translates to: LNKSAKPFLIPDYWN*NIARQCMWLSNTYP Trigger: AGGGTATGTATTTGAGAGCCACATGCATTGTCTTGCTATATTGCAATTCCAGTAGTCAGGAATCAGAAATGGCTTGGCTGATTTGTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR CCA 90 bp | CATTATAAATGTGTGAAACCATGCTTAGCTAACAGAGAGAAGTCCTaGGTCCAGTACCTAAAAAGATGTGGATATAAGGCATTCAAAACA | + |
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Preference number: 1 (lower is better) Translates to: HYKCVKPCLANREKS*VQYLKRCGYKAFKT Trigger: TGTTTTGAATGCCTTATATCCACATCTTTTTAGGTACTGGACCCAGGACTTCTCTCTGTTAGCTAAGCATGGTTTCACACATTTATAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGAGCTGGCTCGGAGAGAAAAGGTGCCTGCCACCCAGCTGGAACTCTGGCACAGCTCAGCAATCCTaGGAGAATGCCACTGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLSWLGEKRCLPPSWNSGTAQQS*ENATEH Trigger: ATGCTCAGTGGCATTCTCTCAGGATTGCTGAGCTGT...GCCAGAGTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCGAGCCAGCTCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGAAGGCAGAGGCAGGTaGACCTCTCTGAGTTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGEGRGR*TSLSWR Trigger: CCGCCAACTCAGAGAGGTGCACCTGCCTCTGCCTTC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGCAGCTCTCTGAACTCTaGTCCCTCTGTCCCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGQLSEL*SLCPHG Trigger: CCCATGGGGACAGAGGGAGCAGAGTTCAGAGAGCTG...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGACTTGCAATCCTCCTaGCTCTGCTTCCCAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGDLQSS*LCFPRP Trigger: AGGCCTTGGGAAGCAGAGGCAGGAGGATTGCAAGTC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGAGCTGGCTCGGAGAGAAAAGGTGCCTGCCACCCAGCTGGAACTCTGGCACCAGGACTACAATATaGCACAATGTCTTTATCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLSWLGEKRCLPPSWNSGTRTTI*HNVFIR Trigger: TCTGATAAAGACATTGTGTCATATTGTAGTCCTGGT...GCCAGAGTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCGAGCCAGCTCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAGCCACTGAGCATATATaGAGGCAAATGTGGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: MLAQSLAAAHRMVALKVQATEHI*RQMWHS Trigger: TGAGTGCCACATTTGCCTGCATATATGCTCAGTGGC...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAACTCGGAGAGAAAAGGTaGCTGCCACCCAGCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKLGEKR*LPPSWN Trigger: GTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCGAG...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGTGCTCAGGACTACCTTaGATGGTCAGGGATCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGCSGLP*MVRDLL Trigger: CAAAAGATCCCTGACCATCCAAGGTAGTCCTGAGCA...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAATTCCTGTGATGCCCTaGCACACACATACATTCACA | + |
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Preference number: 2 (lower is better) Translates to: MLAQSLAAAHRMVALKVQIPVMP*HTHTFT Trigger: TGTGAATGTATGTGTGTGTCAGGGCATCACAGGAAT...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR TCA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGACTGTAAGGAAGAGCTaGGTTTCCCTGTTCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: NNKPCICGPATHFPDGKKTVRKS*VSLFTP Trigger: AGGGGTGAACAGGGAAACTCAGCTCTTCCTTACAGT...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAACCGCGGGCACTGAGCTaGATAGCTGACCATGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKPRALS*IADHVF Trigger: GAAAACATGGTCAGCTATGCAGCTCAGTGCCCGCGG...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAATATGCAGGCAAATGTaGCACTCAATAGGGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: MLAQSLAAAHRMVALKVQICRQM*HSIGDF Trigger: GAAGTCCCCTATTGAGTGCCACATTTGCCTGCATAT...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGCAATCCTCCTGCCTCTaGTTCCCAAGGCCTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: GSKDLHVVLQQLAVFITMQSSCL*FPRPGI Trigger: AATGCCAGGCCTTGGGAAGCAGAGGCAGGAGGATTG...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAATCGGGAGGATGGCCTaGACTATACAGAGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKIGRMA*TIQSFL Trigger: CAGGAAGCTCTGTATAGTGCAGGCCATCCTCCCGAT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAACCCAGCTGGAACTCTaGCTTCCATCAGTGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKTQLEL*LPSVKG Trigger: CCCTTTCACTGATGGAAGCCAGAGTTCCAGCTGGGT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAATTCGCGCCTCGTTCTTaGGATTCACTGACTTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKFAPRS*DSLTLA Trigger: GGCTAAAGTCAGTGAATCTCAAGAACGAGGCGCGAA...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAATCTACATGTGGTTTTaGAACAGCTGGCTGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: MLAQSLAAAHRMVALKVQIYMWF*NSWLFS Trigger: TGAAAACAGCCAGCTGTTGCAAAACCACATGTAGAT...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGACAGAACTCTGTGAATaGATTCTGGCTCCTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: NNKPCICGPATHFPDGKKTELCE*ILAPLG Trigger: ACCAAGAGGAGCCAGAATGCATTCACAGAGTTCTGT...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAACACTAAGTGACCTGTaGAGTGTGGAGGAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKTLSDL*SVEEEL Trigger: TAGCTCCTCCTCCACACTGCACAGGTCACTTAGTGT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCATGCCTGCCACCCAGCTaGAACTCTGGCTTCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPCLPPS*NSGFHQ Trigger: CTGATGGAAGCCAGAGTTCCAGCTGGGTGGCAGGCA...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGTCTGTGAATGCATTCTaGCTCCTCTTGGTCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: NNKPCICGPATHFPDGKKSVNAF*LLLVSN Trigger: GTTTGAGACCAAGAGGAGCCAGAATGCATTCACAGA...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGAGTCAGACTGTAATGTaGTATTGGAAGACCCTACTA | + |
|
Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGSQTVM*YWKTLL Trigger: TAGTAGGGTCTTCCAATACCACATTACAGTCTGACT...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGTTTTGTGCCCCACTATaGACTTTAGGATTTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGFCAPL*TLGFVS Trigger: AGAAACAAATCCTAAAGTTCATAGTGGGGCACAAAA...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGAAACTGGTAGTTTTTaGATCCTGAGGTCTATTACT | + |
|
Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGETGSF*ILRSIT Trigger: AGTAATAGACCTCAGGATTCAAAAACTACCAGTTTC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAACGTTTGGAGAAGCGTaGAAGACAAAGGCAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKTFGEA*KTKAMW Trigger: CCACATTGCCTTTGTCTTTCACGCTTCTCCAAACGT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGGGTTAATGCATCCTTaGAAGTCTATCCTTTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGGLMHP*KSILSL Trigger: TAAAGAAAGGATAGACTTTCAAGGATGCATTAACCC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAAAATACAGACGGCTGTaGTTATGTGTGTTCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: MLAQSLAAAHRMVALKVQKYRRL*LCVFMF Trigger: AAACATGAACACACATAACCACAGCCGTCTGTATTT...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGAAAGACAAAGGCAATGTaGGCTCTGCCCATCGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGKTKAM*ALPIER Trigger: TCTCTCGATGGGCAGAGCCCACATTGCCTTTGTCTT...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAGCTAGCATTCATTTTTaGCCATCAGCTGCAGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKASIHF*PSAAAT Trigger: TGTAGCTGCAGCTGATGGTCAAAAATGAATGCTAGC...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGATGACCACATTCCTGTaGTGCCCTGACACACACATA | + |
|
Preference number: 2 (lower is better) Translates to: GSKDLHVVLQQLAVFITMMTTFL*CPDTHI Trigger: TATGTGTGTGTCAGGGCATCACAGGAATGTGGTCAT...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACATGCTTCATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTGAGTAACAGAGAGAAGTCCTaGGTCCAGTACCTAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NKHASCVLHARPGDDSLSNREKS*VQYLKR Trigger: TCTTTTTAGGTACTGGACCCAGGACTTCTCTCTGTT...ACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATGAAGCATGTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGATTAGAAGCAAACCTTTaGCCCAGTCAGCGGCAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGLEANL*PSQRQV Trigger: AACTTGCCGCTGACTGGGCCAAAGGTTTGCTTCTAA...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | CAAGTTTATTTATTCATTTACACTAGGAGATGGACAGGGTTTCATTaGGTAGCTCAGACTGACCCAAGACTTGCAATCCTCCTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVYLFIYTRRWTGFH*VAQTDPRLAILLPL Trigger: CAGAGGCAGGAGGATTGCAAGTCTTGGGTCAGTCTGAGCTACCAAATGAAACCCTGTCCATCTCCTAGTGTAAATGAATAAATAAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAAAGACAAGGAAAAGCTaGACGAAACTCCAGTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKKTRKS*TKLQSQ Trigger: TTGTGACTGGAGTTTCGTTCAGCTTTTCCTTGTCTT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTTCCCTGTTCACCCCTaGCCTCTTGTTAAACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHFPVHP*PLVKQC Trigger: ACATTGTTTAACAAGAGGGCAGGGGTGAACAGGGAA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAACCAATCCAGGAACATaGGATGTCTTTCCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKTNPGT*DVFPSS Trigger: AGAAGATGGAAAGACATCCCATGTTCCTGGATTGGT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAAAATTCTCAATAGTTTaGCCATCCAGTCTTCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKKFSIV*PSSLPG Trigger: GCCAGGAAGACTGGATGGCCAAACTATTGAGAATTT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | GAGTATCTGTTAAATACAGACGGCTGTGGTTATGTGTGTTCATGTTaGGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: EYLLNTDGCGYVCSC*GLRIYMWFCNSWLF Trigger: AAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACACACATAACCACAGCCGTCTGTATTTAACAGATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | TCTCTGCCATCAGCGAGGAAGAACATTTTGAAACATAGCAAACATTaGCTTTGCGACTTCTGTGAACTCTCCATTGGTATCCTGTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSARKNILKHSKH*LCDFCELSIGILST Trigger: AGTAGACAGGATACCAATGGAGAGTTCACAGAAGTCGCAAAGCAAATGTTTGCTATGTTTCAAAATGTTCTTCCTCGCTGATGGCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGAATGTCATGGGATGTTaGGTAGAACTGCATTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: GSKDLHVVLQQLAVFITMNVMGC*VELHSV Trigger: GACTGAATGCAGTTCTACTCAACATCCCATGACATT...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAGCTTTGCGACTTCTGTaGACTCTCCATTGGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPALRLL*TLHWYP Trigger: AGGATACCAATGGAGAGTTCACAGAAGTCGCAAAGC...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCACTAAGGATTCACCTGTaGAAGAGCCAAAACACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPLRIHL*KSQNTA Trigger: GGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAG...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCACAGGGGCAAAGGTTTTaGGTTAGCTATGCTGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPQGQRF*VSYADF Trigger: GAAATCAGCATAGCTAACTCAAAACCTTTGCCCCTG...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAAAATGTGTGAAACCATaGTTAGCTAACAGAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: MLASQSCRPEFSPQNPCKKCVKP*LANREK Trigger: CTTCTCTCTGTTAGCTAAGCATGGTTTCACACATTT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGCTTTGTAGGATCAAATaGTTTTGGCTCAACAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSKDLHVVLQQLAVFITMLCRIK*FWLNRH Trigger: ATGCCTGTTGAGCCAAAAGCATTTGATCCTACAAAG...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGATGGTTTTGCAACAGCTaGCTGTTTTCATTACTATGG | + |
|
Preference number: 2 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGWFCNS*LFSLLW Trigger: CCATAGTAATGAAAACAGCCAGCTGTTGCAAAACCA...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | GGTTTTGCAACAGCTGGCTGTTTTCATTACTATGGCTCTGTGATATaGCTTAGAACCTGGTATGGTAATCTCTTTAGGGCTGTTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GFATAGCFHYYGSVI*LRTWYGNLFRAVLF Trigger: AAAAAGAACAGCCCTAAAGAGATTACCATACCAGGTTCTAAGCAATATCACAGAGCCATAGTAATGAAAACAGCCAGCTGTTGCAAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | CTCACTTTAATTAGGATTTCTCTGCCATCAGCGAGGAAGAACATTTaGAAACATAGCAAACATTTGCTTTGCGACTTCTGTGAACTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTLIRISLPSARKNI*KHSKHLLCDFCELS Trigger: GGAGAGTTCACAGAAGTCGCAAAGCAAATGTTTGCTATGTTTCAAAATGTTCTTCCTCGCTGATGGCAGAGAAATCCTAATTAAAGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATATTTACACTAGGAGATaGACAGGGTTTCATTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHIYTRR*TGFHLV Trigger: TACCAAATGAAACCCTGTCCATCTCCTAGTGTAAAT...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCATTAGCTGAAAGAAAATaGGTTCACAGGCTCATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPLAERK*VHRLMG Trigger: TCCCATGAGCCTGTGAACCCATTTTCTTTCAGCTAA...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 90 bp | CCAAAAATTCTCAATAGTTTGGCCATCCAGTCTTCCTGGCATCATTaGTTAAAGATGCTGTCTTTCCTCCAGTGTGTATTTTTGGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: PKILNSLAIQSSWHH*LKMLSFLQCVFLEY Trigger: ATACTCCAAAAATACACACTGGAGGAAAGACAGCATCTTTAACAAATGATGCCAGGAAGACTGGATGGCCAAACTATTGAGAATTTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR TCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAATTACTATGGCTCTGTaGTATTGCTTAGAACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SLDCVSTVNACQSIMQKPITMAL*YCLEPG Trigger: ACCAGGTTCTAAGCAATATCACAGAGCCATAGTAAT...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CCTGGCACTGGGAAGGCAGAGGCAGGTGCACCTCTCTaGGTTGGCGGCCAGCCTTGTCTACATAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGTGKAEAGAPL*VGGQPCLHSSR Trigger: CCTGGAACTATGTAGACAAGGCTGGCCGCCAACTCAGAGAGGTGCACCTGCCTCTGCCTTCCCAGTGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTaGGTCCTCAGACCGCGGGCACTGAGCTGCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HVFYMPGLVMTV*VLRPRALSCIA Trigger: AGCTATGCAGCTCAGTGCCCGCGGTCTGAGGACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | CCTGCTACACACTTCCCTGATGGCAAGAAGGGTCACTaGCTCAGTCACACTGTCCTGTCCCAGCAGGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PATHFPDGKKGH*LSHTVLSQQVD Trigger: GTCAACCTGCTGGGACAGGACAGTGTGACTGAGGCAGTGACCCTTCTTGCCATCAGGGAAGTGTGTAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | AGTGCAAAATGGAGGACCCCCTTTCTCAGCAGGGCTTaGCCCTCTCCAGTGACCTTCTCTGTCTGGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SAKWRTPFLSRA*PSPVTFSVWRV Trigger: CACTCTCCAGACAGAGAAGGTCACTGGAGAGGGGCAAGCCCTGCTGAGAAAGGGGGTCCTCCATTTTGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GTGGGCTCTGCCCATCGAGAGAGAAAATGGGCTTTGTaGGGTCTCCCAGGCTCAGATGCAGCTTCTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGSAHRERKWAL*GLPGSDAASSL Trigger: AAGGGAAGAAGCTGCATCTGAGCCTGGGAGACCCCACAAAGCCCATTTTCTCTCTCGATGGGCAGAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CTCTCTGGAAGTCCTAGTGTCATATTCACAGCTCTCTaGACTCTGCTCCCTCTGTCCCCATGGGCCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSGSPSVIFTAL*TLLPLSPWAWW Trigger: CCACCAGGCCCATGGGGACAGAGGGAGCAGAGTTCAGAGAGCTGTGAATATGACACTAGGACTTCCAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | TGGGTTCACAGGCTCATGGGAGGGAGCTCCAGTGCGTaGAAGCAGGAGGCAGCCAGTATTCAGTTCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WVHRLMGGSSSA*KQEAASIQFIS Trigger: GCTTATGAACTGAATACTGGCTGCCTCCTGCTTTCACGCACTGGAGCTCCCTCCCATGAGCCTGTGAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | AAAGGCAATGTGGGCTCTGCCCATCGAGAGAGAAAATaGGCTTTGTGGGGTCTCCCAGGCTCAGATGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGNVGSAHRERK*ALWGLPGSDAA Trigger: AGCTGCATCTGAGCCTGGGAGACCCCACAAAGCCCATTTTCTCTCTCGATGGGCAGAGCCCACATTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGCTTTCTCAGCAGGGCTaGCCCCTCTCCAGTGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGLSQQG*PLSSDL Trigger: AAGGTCACTGGAGAGGGGCAAGCCCTGCTGAGAAAG...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGACAGTGGCGCTTGGGTaGAGGGGTAAAGGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGTVALG*RGKGTG Trigger: TCCTGTCCCTTTACCCCTCAACCCAAGCGCCACTGT...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | TTCTCTGTCTGGAGAGTGTCTCTAAGCACAGGTGCCTaGCCTCATCGGGAGGATGGCCTGCACTATACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSVWRVSLSTGA*PHREDGLHYTE Trigger: CTCTGTATAGTGCAGGCCATCCTCCCGATGAGGTCAGGCACCTGTGCTTAGAGACACTCTCCAGACAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CAAACCCTGCATATGTGGACCTGCTACACACTTCCCTaGTGGCAAGAAGGGTCACTGCCTCAGTCACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: QTLHMWTCYTLP*WQEGSLPQSHC Trigger: ACAGTGTGACTGAGGCAGTGACCCTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | GTCTCACAAATCCGAGGGAGGCAGGCATTTTCCCACTaGGCTACTAAGAATCCTGGGAGTGTAACTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSQIRGRQAFSH*ATKNPGSVTAG Trigger: CCCAGCAGTTACACTCCCAGGATTCTTAGTAGCTCAGTGGGAAAATGCCTGCCTCCCTCGGATTTGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | AAAATGGGTTCACAGGCTCATGGGAGGGAGCTCCAGTaGGTGAAAGCAGGAGGCAGCCAGTATTCAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KMGSQAHGRELQ*VKAGGSQYSVH Trigger: ATGAACTGAATACTGGCTGCCTCCTGCTTTCACGCACTGGAGCTCCCTCCCATGAGCCTGTGAACCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | CGGAGAGAAAAGGTGCCTGCCACCCAGCTGGAACTCTaGCTTCCATCAGTGAAAGGGCAAAGATTAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RREKVPATQLEL*LPSVKGQRLRT Trigger: GGTTCTTAATCTTTGCCCTTTCACTGATGGAAGCCAGAGTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TTATCTCAGCACTGGGGAGGGCAAGATTCACCCAGGTaGATGAGGTCCAGGCCTTACCAGCCAACTAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSQHWGGQDSPR*MRSRPYQPTNL Trigger: TAAGTTAGTTGGCTGGTAAGGCCTGGACCTCATCCACCTGGGTGAATCTTGCCCTCCCCAGTGCTGAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | AGTTGTCTCAAAGCGGCGCTAGGAGCCAAACATGTCTaGAAGAGAAAGACTACCACCCCAGCCTGTCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: SCLKAALGAKHV*KRKTTTPACLL Trigger: CAGTAGACAGGCTGGGGTGGTAGTCTTTCTCTTCCAGACATGTTTGGCTCCTAGCGCCGCTTTGAGACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GCACTTCTAGGAAGGTCTAATGCCCTCCCTCTCATATaGACACATCACATGGTCTATGGGGAGTCCACACGG | + |
|
Preference number: 3 (lower is better) Translates to: ALLGRSNALPLI*THHMVYGESTR Trigger: CCGTGTGGACTCCCCATAGACCATGTGATGTGTCCATATGAGAGGGAGGGCATTAGACCTTCCTAGAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGCATTCTGGCTCCTCTaGGTCTCAAACTCTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGAFWLL*VSNSAS Trigger: AGAAGCAGAGTTTGAGACCAAGAGGAGCCAGAATGC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | AAGAGCCAAAACACTGCCAAGACGTTTGGAGAAGCGTaGAAGACAAAGGCAATGTGGGCTCTGCCCATCGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSQNTAKTFGEA*KTKAMWALPIE Trigger: CTCGATGGGCAGAGCCCACATTGCCTTTGTCTTTCACGCTTCTCCAAACGTCTTGGCAGTGTTTTGGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | TTGGAGAAGCGTGAAAGACAAAGGCAATGTGGGCTCTaGCCATCGAGAGAGAAAATGGGCTTTGTGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LEKRERQRQCGL*PSREKMGFVGS Trigger: AGACCCCACAAAGCCCATTTTCTCTCTCGATGGGCAGAGCCCACATTGCCTTTGTCTTTCACGCTTCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | CAGCAGGTTGACAGGCAGCCTGGAAGGCAGATAAGATaGATGCTAACAGGTGGTCAGGAGATTTGTGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QQVDRQPGRQIR*MLTGGQEICAD Trigger: ATCAGCACAAATCTCCTGACCACCTGTTAGCATCCATCTTATCTGCCTTCCAGGCTGCCTGTCAACCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAACAAAAGGAGCTAGTGTaGCTGACCAGGATCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: MLAQSLAAAHRMVALKVQQKELV*LTRIQE Trigger: TTCTTGGATCCTGGTCAGCAACACTAGCTCCTTTTG...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAAATTCGCGCCTCGTTCTaGAGATTCACTGACTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: MLAQSLAAAHRMVALKVQIRASF*RFTDFS Trigger: GCTAAAGTCAGTGAATCTCAAGAACGAGGCGCGAAT...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATCAGGCTGTGGCCCTCTaGCTGCAGCCTCTAAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHQAVAL*LQPLKC Trigger: GCACTTTAGAGGCTGCAGCAAGAGGGCCACAGCCTG...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | GATACCGGGGCTGGGGCGATATCTCAGTCAGTGAAATaGTTGCCTCACAATCATGTAGACCTGAGTTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTGAGAISQSVK*LPHNHVDLSLV Trigger: GACTAAACTCAGGTCTACATGATTGTGAGGCAAGCATTTCACTGACTGAGATATCGCCCCAGCCCCGGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACATGCTTCATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTGAGTCTTAGAAGCAAACCTTaGGCCCAGTCAGCGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NKHASCVLHARPGDDSLSLRSKP*AQSAAS Trigger: ACTTGCCGCTGACTGGGCCAAAGGTTTGCTTCTAAG...ACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATGAAGCATGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGAGAGAGAAAATGGGCTTaGTGGGGTCTCCCAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGERKWA*WGLPGS Trigger: TGAGCCTGGGAGACCCCACAAAGCCCATTTTCTCTC...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGGGGGTTAATGCATCCTaGAAAGTCTATCCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGGVNAS*KVYPFF Trigger: AAAGAAAGGATAGACTTTCAAGGATGCATTAACCCC...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CCATCAGTGAAAGGGCAAAGATTAAGAACCAACTCCTaGAAGCGGTCCTCTGATGACCACATTCCTGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PSVKGQRLRTNS*KRSSDDHIPVM Trigger: CATCACAGGAATGTGGTCATCAGAGGACCGCTTTCAGGAGTTGGTTCTTAATCTTTGCCCTTTCACTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | CTTCCCAAGGCCTGGCATTATAAATGTGTGAAACCATaGTTAGCTAACAGAGAGAAGTCCTGGGTCCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LPKAWHYKCVKP*LANREKSWVQY Trigger: GTACTGGACCCAGGACTTCTCTCTGTTAGCTAAGCATGGTTTCACACATTTATAATGCCAGGCCTTGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GTCAGCGGCAAGTTACAGAACTCTGTGAATGCATTCTaGCTCCTCTTGGTCTCAAACTCTGCTTCTCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: VSGKLQNSVNAF*LLLVSNSASQL Trigger: AAGTTGAGAAGCAGAGTTTGAGACCAAGAGGAGCCAGAATGCATTCACAGAGTTCTGTAACTTGCCGCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TGGAAAACTTGCATGATTCGGGCTTTTGTGAATATCTaGTGTTGTTGGAGTAACCTCGCAACAGGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WKTCMIRAFVNI*CCWSNLATGRD Trigger: GTCCCTGCCTGTTGCGAGGTTACTCCAACAACACCAGATATTCACAAAAGCCCGAATCATGCAAGTTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | ATGACTGGAGAAATTCCCTCCTCTTCTTTCCTGTACTaGGAACTTAACTCAGGGTCTCACAAATCCGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MTGEIPSSSFLY*ELNSGSHKSEG Trigger: TCCCTCGGATTTGTGAGACCCTGAGTTAAGTTCCCAGTACAGGAAAGAAGAGGAGGGAATTTCTCCAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | CAACTGCAGCCCGCAGTCACTCTTTTCTTAAATGACTaGAGAAATTCCCTCCTCTTCTTTCCTGTACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLQPAVTLFLND*RNSLLFFPVLG Trigger: TCCCAGTACAGGAAAGAAGAGGAGGGAATTTCTCCAGTCATTTAAGAAAAGAGTGACTGCGGGCTGCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | CCTTTCTCTGCCTGTCCAGGGGTCAGATTACAAGCATaGCCTACCATATGCAACTTTTTACCTGGATCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PFSACPGVRLQA*PTICNFLPGSI Trigger: TATGGATCCAGGTAAAAAGTTGCATATGGTAGGCCATGCTTGTAATCTGACCCCTGGACAGGCAGAGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGGCTTCTCAACTTAGGTaGTTTTGTGTCTTCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NNKPCICGPATHFPDGKKASQLR*FCVFSC Trigger: ACAGCTGAAGACACAAAACAACCTAAGTTGAGAAGC...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CCACCATTCCCTAAAAACCCTTATATACCTCAACCCTaGAATAATAAAGCAGAGCCCTCTCACTGGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPFPKNPYIPQP*NNKAEPSHWGC Trigger: ACAGCCCCAGTGAGAGGGCTCTGCTTTATTATTTCAGGGTTGAGGTATATAAGGGTTTTTAGGGAATGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTaGAGGTACAAAACTAGAAATAAAGCAGCTACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLWQQHTGWWL*RYKTRNKAATQ Trigger: TTGAGTAGCTGCTTTATTTCTAGTTTTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | CTGAGTTTAGTCCCCAGAACCCATGTAAATATGATATaGTGGCACACACTTGTTATCTCAGCACTGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLVPRTHVNMI*WHTLVISALGR Trigger: CCTCCCCAGTGCTGAGATAACAAGTGTGTGCCATCATATCATATTTACATGGGTTCTGGGGACTAAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | AACTGTAAGGAAGAGCTGAGTTTCCCTGTTCACCCCTaGCCTCTTGTTAAACAATGTCCACTTCAAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NCKEELSFPVHP*PLVKQCPLQKE Trigger: CTCCTTTTGAAGTGGACATTGTTTAACAAGAGGGCAGGGGTGAACAGGGAAACTCAGCTCTTCCTTACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | ATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTaGCAAGACGTTTGGAGAAGCGTGAAAGACAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ITKDSPVEEPKH*QDVWRSVKDKG Trigger: GCCTTTGTCTTTCACGCTTCTCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | TCTGTAAAATACCAAGGTGGAGGTTATCCTCTAGCTTaGACATACACTGTACATACACGTGCACCTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SVKYQGGGYPLA*TYTVHTRAPAH Trigger: GTGTGCAGGTGCACGTGTATGTACAGTGTATGTGCAAGCTAGAGGATAACCTCCACCTTGGTATTTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | TGTCCAGGGGTCAGATTACAAGCATGGCCTACCATATaGAACTTTTTACCTGGATCCATATTCTCATGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CPGVRLQAWPTI*NFLPGSIFSWV Trigger: CACCCATGAGAATATGGATCCAGGTAAAAAGTTGCATATGGTAGGCCATGCTTGTAATCTGACCCCTGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TGTTCACCAGCTTCCACATCACACACTGCTCATAGCTaGCTGTCCTTCAGTCTTTTACACACGTACTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: CSPASTSHTAHS*LSFSLLHTYSY Trigger: ATATGAGTACGTGTGTAAAAGACTGAAGGACAGCCAGCTATGAGCAGTGTGTGATGTGGAAGCTGGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTTGCTCAGGACTACCTaGGATGGTCAGGGATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHLLRTT*DGQGSF Trigger: AAAAGATCCCTGACCATCCAAGGTAGTCCTGAGCAA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGAGACACCCTGGCTTCCTaGTTTAGAAAGCAGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGDTLAS*FRKQRK Trigger: CTTTCTCTGCTTTCTAAACAAGGAAGCCAGGGTGTC...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | GCTAGGGACATTTTGCTGCTCTTGAGTTTTGTTTGTTaGAACAGGCTCTCACTTTGTAGTCCAGTGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ARDILLLLSFVC*NRLSLCSPVYL Trigger: GAGGTACACTGGACTACAAAGTGAGAGCCTGTTTCAACAAACAAAACTCAAGAGCAGCAAAATGTCCCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | AAAGGGAGACCCACAAAGTGGCAGGGGCAAAGGTTTTaGGTTAGCTATGCTGATTTCAAGTCAGCTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGRPTKWQGQRF*VSYADFKSAYS Trigger: TGAATAAGCTGACTTGAAATCAGCATAGCTAACTCAAAACCTTTGCCCCTGCCACTTTGTGGGTCTCCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TTTTTACAACAAAACTGGCAAACTCCAGTTATATGTTaGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLQQNWQTPVIC*LSLWQQHTGWW Trigger: CCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACATATAACTGGAGTTTGCCAGTTTTGTTGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GACCCTACGAGCAGAGAGAGGTTTTTACAACAAAACTaGCAAACTCCAGTTATATGTTGGCTCAGTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DPTSRERFLQQN*QTPVICWLSLW Trigger: CCAAAGACTGAGCCAACATATAACTGGAGTTTGCCAGTTTTGTTGTAAAAACCTCTCTCTGCTCGTAGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCATGGACAGGGTTTCATTaGGTAGCTCAGACTGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLDCVSTVNACQSIMQKPWTGFH*VAQTDP Trigger: TGGGTCAGTCTGAGCTACCAAATGAAACCCTGTCCA...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAGAATGTCATGGGATGTaGAGTAGAACTGCATTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MLASQSCRPEFSPQNPCKECHGM*SRTAFS Trigger: ACTGAATGCAGTTCTACTCAACATCCCATGACATTC...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTTAGGGCTGTTCTTTTaGCTCAGGACTACCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHLGLFF*LRTTLD Trigger: ATCCAAGGTAGTCCTGAGCAAAAAGAACAGCCCTAA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGAGATCTACATGTGGTTTaGCAACAGCTGGCTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGDLHVV*QQLAVF Trigger: GAAAACAGCCAGCTGTTGCAAAACCACATGTAGATC...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | AAGCGGTCCTCTGATGACCACATTCCTGTGATGCCCTaGCACACACATACATTCACACTAAAAGTAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: KRSSDDHIPVMP*HTHTFTLKVSI Trigger: AATACTTACTTTTAGTGTGAATGTATGTGTGTGTCAGGGCATCACAGGAATGTGGTCATCAGAGGACCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | ATTCTGGCTATTAGCCAACAGGGGTTAATGCATCCTTaGAAGTCTATCCTTTCTTTATGTCCTCTCCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ILAISQQGLMHP*KSILSLCPLPT Trigger: AGTGGGGAGAGGACATAAAGAAAGGATAGACTTTCAAGGATGCATTAACCCCTGTTGGCTAATAGCCAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | ATTAATTCACTAGATTGTGTCAGTACTGTAAATGCTTaGCAAAGCATTATGCAGAAACCAGGGGAGGCGACC | + |
|
Preference number: 3 (lower is better) Translates to: INSLDCVSTVNA*QSIMQKPGEAT Trigger: GGTCGCCTCCCCTGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TGTGTGAAACCATGCTTAGCTAACAGAGAGAAGTCCTaGGTCCAGTACCTAAAAAGATGTGGATATAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CVKPCLANREKS*VQYLKRCGYKA Trigger: TGCCTTATATCCACATCTTTTTAGGTACTGGACCCAGGACTTCTCTCTGTTAGCTAAGCATGGTTTCACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GACATGTTAGGGAAGAAATTACTAAGGATTCACCTGTaGAAGAGCCAAAACACTGCCAAGACGTTTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DMLGKKLLRIHL*KSQNTAKTFGE Trigger: TTCTCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTTCTTCCCTAACATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | GACCAATGCAACATAGCAGAAACAAGCATGTCACTCTaGAAGCTTCAGTCTTGGCTTTTCTCTTTAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: DQCNIAETSMSL*KLQSWLFSLAL Trigger: AAGTGCTAAAGAGAAAAGCCAAGACTGAAGCTTCCAGAGTGACATGCTTGTTTCTGCTATGTTGCATTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTATGGCTCTGTGATATaGCTTAGAACCTGGTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHYGSVI*LRTWYG Trigger: ACCATACCAGGTTCTAAGCAATATCACAGAGCCATA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAACTTGAGTTTTGTTTGTaGAAACAGGCTCTCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: MLASQSCRPEFSPQNPCKLEFCL*KQALTL Trigger: CAAAGTGAGAGCCTGTTTCAACAAACAAAACTCAAG...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAGTCCGTGCCATCTGGTaGCTTGAAGAAGTCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLDCVSTVNACQSIMQKPVRAIW*LEEVRK Trigger: TTTTCTGACTTCTTCAAGCAACCAGATGGCACGGAC...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | TGTTCATGTTTGGGTCTAAGGATCTACATGTGGTTTTaGAACAGCTGGCTGTTTTCATTACTATGGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSCLGLRIYMWF*NSWLFSLLWLC Trigger: ACAGAGCCATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | ATTCCTGACTACTGGAATTGCAATATAGCAAGACAATaGATGTGGCTCTCAAATACATACCCTAACAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: IPDYWNCNIARQ*MWLSNTYPNST Trigger: GGTGCTGTTAGGGTATGTATTTGAGAGCCACATGCATTGTCTTGCTATATTGCAATTCCAGTAGTCAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR GCA 72 bp | TCAGCCAAGCCATTTCTGATTCCTGACTACTGGAATTaGAATATAGCAAGACAATGCATGTGGCTCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SAKPFLIPDYWN*NIARQCMWLSN Trigger: ATTTGAGAGCCACATGCATTGTCTTGCTATATTGCAATTCCAGTAGTCAGGAATCAGAAATGGCTTGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | AACAAATCAGCCAAGCCATTTCTGATTCCTGACTACTaGAATTGCAATATAGCAAGACAATGCATGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NKSAKPFLIPDY*NCNIARQCMWL Trigger: GAGCCACATGCATTGTCTTGCTATATTGCAATTCCAGTAGTCAGGAATCAGAAATGGCTTGGCTGATTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGACATTCAGTCTGTAAATaGCATTTGGTAGGATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGHSVCK*HLVGWS Trigger: TGACCATCCTACCAAATGCAATTTACAGACTGAATG...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTCTTCCTGGCATCATTaGTTAAAGATGCTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHSSWHH*LKMLSF Trigger: GAAAGACAGCATCTTTAACAAATGATGCCAGGAAGA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAGCTCTTGAGTTTTGTTaGTTGAAACAGGCTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SLDCVSTVNACQSIMQKPALEFC*LKQALT Trigger: AGTGAGAGCCTGTTTCAACAAACAAAACTCAAGAGC...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | TTAGGATTTCTCTGCCATCAGCGAGGAAGAACATTTTaGAACATAGCAAACATTTGCTTTGCGACTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGFLCHQRGRTF*NIANICFATSV Trigger: CACAGAAGTCGCAAAGCAAATGTTTGCTATGTTTCAAAATGTTCTTCCTCGCTGATGGCAGAGAAATCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | AAGGCTGAACAAATCAGCCAAGCCATTTCTGATTCCTaGCTACTGGAATTGCAATATAGCAAGACAATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KAEQISQAISDS*LLELQYSKTMH Trigger: ATGCATTGTCTTGCTATATTGCAATTCCAGTAGTCAGGAATCAGAAATGGCTTGGCTGATTTGTTCAGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TATGTGTGTTCATGTTTGGGTCTAAGGATCTACATGTaGTTTTGCAACAGCTGGCTGTTTTCATTACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: YVCSCLGLRIYM*FCNSWLFSLLW Trigger: CCATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACACACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | ATTACAAGCATGGCCTACCATATGCAACTTTTTACCTaGATCCATATTCTCATGGGTGCTAGTAAGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ITSMAYHMQLFT*IHILMGASKYF Trigger: GAAGTACTTACTAGCACCCATGAGAATATGGATCCAGGTAAAAAGTTGCATATGGTAGGCCATGCTTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR TCA 72 bp | TTGCAACAGCTGGCTGTTTTCATTACTATGGCTCTGTaGTATTGCTTAGAACCTGGTATGGTAATCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LQQLAVFITMAL*YCLEPGMVISL Trigger: TAAAGAGATTACCATACCAGGTTCTAAGCAATATCACAGAGCCATAGTAATGAAAACAGCCAGCTGTTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TTTCATTACTATGGCTCTGTGATATTGCTTAGAACCTaGTATGGTAATCTCTTTAGGGCTGTTCTTTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FHYYGSVILLRT*YGNLFRAVLFA Trigger: AGCAAAAAGAACAGCCCTAAAGAGATTACCATACCAGGTTCTAAGCAATATCACAGAGCCATAGTAATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CCA 72 bp | TGTATTTTTGGAGTATCTGTTAAATACAGACGGCTGTaGTTATGTGTGTTCATGTTTGGGTCTAAGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: CIFGVSVKYRRL*LCVFMFGSKDL Trigger: TAGATCCTTAGACCCAAACATGAACACACATAACCACAGCCGTCTGTATTTAACAGATACTCCAAAAATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GCACTGGGAAGGCAGAGGCAGGTGCACCTCTCTGAGTaGGCGGCCAGCCTTGTCTACATAGTTCCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGRQRQVHLSE*AASLVYIVPGQ Trigger: CTGTCCTGGAACTATGTAGACAAGGCTGGCCGCCAACTCAGAGAGGTGCACCTGCCTCTGCCTTCCCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | ACCGGGGCTGGGGCGATATCTCAGTCAGTGAAATGCTaGCCTCACAATCATGTAGACCTGAGTTTAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGAGAISQSVKC*PHNHVDLSLVP Trigger: GGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCATTTCACTGACTGAGATATCGCCCCAGCCCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGCTTGGAGAGGGCCTGTaGCTTTGGCAGTGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNKPCICGPATHFPDGKKLGEGL*LWQCPR Trigger: TCTGGGACACTGCCAAAGCCACAGGCCCTCTCCAAG...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | AACAACAAACCCTGCATATGTGGACCTGCTACACACTTCCCTGATGGCAAGAAGAGTCTGCTACCTGAGTaGGGCTCTGGAGACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNKPCICGPATHFPDGKKSLLPE*GSGDSG Trigger: ACCTGAGTCTCCAGAGCCCCACTCAGGTAGCAGACT...CTTCTTGCCATCAGGGAAGTGTGTAGCAGGTCCACATATGCAGGGTTTGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GTGTTGCTGCCACGTGTGTCCGTGCCATCTGGTTGCTaGAAGAAGTCAGAAAAAGGTGCTGTATCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRVSVPSGC*KKSEKGAVSHR Trigger: CCTATGGGATACAGCACCTTTTTCTGACTTCTTCAAGCAACCAGATGGCACGGACACACGTGGCAGCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GTGTGTGTTGCTGCCACGTGTGTCCGTGCCATCTGGTaGCTTGAAGAAGTCAGAAAAAGGTGCTGTATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVAATCVRAIW*LEEVRKRCCIP Trigger: TGGGATACAGCACCTTTTTCTGACTTCTTCAAGCAACCAGATGGCACGGACACACGTGGCAGCAACACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGCATCACCACTACAGGTaGCAAGGACATGCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGHHHYR*QGHAHC Trigger: ACAATGAGCATGTCCTTGTCACCTGTAGTGGTGATG...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAGTCCCAGAGCTGCAGTaGGCCATCACCACTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLASQSCRPEFSPQNPCKVPELQ*AITTTG Trigger: ACCTGTAGTGGTGATGGCTCACTGCAGCTCTGGGAC...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTGGCTCTGAAGGTACAATCCAGAATCTTACAGTaGAGTCATAGGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLAQSLAAAHRMVALKVQSRILQ*SHRSRR Trigger: CCTCCTGCTCCTATGACTTCACTGTAAGATTCTGGA...TTGTACCTTCAGAGCCACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGTTCCGTCTGATGTGCTaGAATCACAATCCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGFRLMC*NHNPYS Trigger: GGAGTACGGATTGTGATTCCAGCACATCAGACGGAA...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | CCCTGCTACACCCCTTCCTCCATTCGCGCCTCGTTCTaGAGATTCACTGACTTTAGCCAGTATTACCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCYTPSSIRASF*RFTDFSQYYHE Trigger: TTCATGGTAATACTGGCTAAAGTCAGTGAATCTCAAGAACGAGGCGCGAATGGAGGAAGGGGTGTAGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGCAAGTTGTTCACCTCTaGTTTGGCTCCAATCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGQVVHL*FGSNQH Trigger: GTGTTGATTGGAGCCAAACCAGAGGTGAACAACTTG...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGACAGATCCTCAGAGTCTaGTCTCCTGAGGCTGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGQILRV*SPEAEA Trigger: CGCTTCAGCCTCAGGAGATCAGACTCTGAGGATCTG...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | GTCAGTATGTGTGTGCATACCAGTCTATGGAGTCCAGAAGAGGGAAGGTGTGGGTGTTCACCTCTGGTTTaGCTCCAATCAACACTATAC | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVHTSLWSPEEGRCGCSPLV*LQSTLY Trigger: GTATAGTGTTGATTGGAGCCAAACCAGAGGTGAACA...CCCACACCTTCCCTCTTCTGGACTCCATAGACTGGTATGCACACACATACTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAAAACAACCAGGGATGTaGGGAGACCAGATTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLASQSCRPEFSPQNPCKKQPGM*GDQIVL Trigger: CAGCACAATCTGGTCTCCTCACATCCCTGGTTGTTT...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGCCTCACAATCATGTAGACCTGAGTTTAGTCCCCAGAACCCATGTAAAGACAGTTTGATCCCATaGGCCAGACACAACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLASQSCRPEFSPQNPCKDSLIP*ARHNKL Trigger: CAACTTGTTGTGTCTGGCTCATGGGATCAAACTGTC...TTTACATGGGTTCTGGGGACTAAACTCAGGTCTACATGATTGTGAGGCAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGCACACTTTGACAGTTTaGTCCCATGAGCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GSKDLHVVLQQLAVFITMHTLTV*SHEPDT Trigger: TGTGTCTGGCTCATGGGATCAAACTGTCAAAGTGTG...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GAACCTGGTATGGTAATCTCTTTAGGGCTGTTCTTTTaGCTCAGGACTACCTTGGATGGTCAGGGATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPGMVISLGLFF*LRTTLDGQGSF Trigger: AAAAGATCCCTGACCATCCAAGGTAGTCCTGAGCAAAAAGAACAGCCCTAAAGAGATTACCATACCAGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GTTTTTACAACAAAACTGGCAAACTCCAGTTATATGTaGGCTCAGTCTTTGGCAGCAGCACACAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTTKLANSSYM*AQSLAAAHRMV Trigger: CACCATCCTGTGTGCTGCTGCCAAAGACTGAGCCAACATATAACTGGAGTTTGCCAGTTTTGTTGTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATCAAGTAAACTCTGTGTaGTGCTCCACTGTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHQVNSV*CSTVSR Trigger: TCTGGAAACAGTGGAGCATCACACAGAGTTTACTTG...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | AACAAACATGCTTCATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTGAGTGGTCATAGATCTTTATaGTTTCATCCCAGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKHASCVLHARPGDDSLSGHRSL*FHPRNS Trigger: ACTGTTCCTGGGATGAAACCATAAAGATCTATGACC...ACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATGAAGCATGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GTGTTCATGTTTGGGTCTAAGGATCTACATGTGGTTTaGCAACAGCTGGCTGTTTTCATTACTATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFMFGSKDLHVV*QQLAVFITMAL Trigger: CAGAGCCATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGCTGATAGCATATGTGTaGCCGAGAAGTTCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GSKDLHVVLQQLAVFITMLIAYV*PRSSNT Trigger: TGTGTTTGAACTTCTCGGTCACACATATGCTATCAG...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | TTTTGCTCAGGACTACCTTGGATGGTCAGGGATCTTTaGTGCCCCACTATGAACTTTAGGATTTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FCSGLPWMVRDL*CPTMNFRICFY Trigger: ATAGAAACAAATCCTAAAGTTCATAGTGGGGCACAAAAGATCCCTGACCATCCAAGGTAGTCCTGAGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | ACAGCTGGCTGTTTTCATTACTATGGCTCTGTGATATaGCTTAGAACCTGGTATGGTAATCTCTTTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAGCFHYYGSVI*LRTWYGNLFRA Trigger: AGCCCTAAAGAGATTACCATACCAGGTTCTAAGCAATATCACAGAGCCATAGTAATGAAAACAGCCAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | TTAAATACAGACGGCTGTGGTTATGTGTGTTCATGTTaGGGTCTAAGGATCTACATGTGGTTTTGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTDGCGYVCSC*GLRIYMWFCNS Trigger: GCTGTTGCAAAACCACATGTAGATCCTTAGACCCAAACATGAACACACATAACCACAGCCGTCTGTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | CTCAATAGTTTGGCCATCCAGTCTTCCTGGCATCATTaGTTAAAGATGCTGTCTTTCCTCCAGTGTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LNSLAIQSSWHH*LKMLSFLQCVF Trigger: AAATACACACTGGAGGAAAGACAGCATCTTTAACAAATGATGCCAGGAAGACTGGATGGCCAAACTATTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | CTCCTCTTGGTCTCAAACTCTGCTTCTCAACTTAGGTaGTTTTGTGTCTTCAGCTGTCTTCATCTTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSNSASQLR*FCVFSCLHLVF Trigger: AAACACAAGATGAAGACAGCTGAAGACACAAAACAACCTAAGTTGAGAAGCAGAGTTTGAGACCAAGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR TCA 90 bp | AAATTACTAAGGATTCACCTGTGGAAGAGCCAAAACACTGCCAAGACGTTTGGAAAGCGGATCAGGCTTTaGAAAATTCCAGAATCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLLRIHLWKSQNTAKTFGKRIRL*KIPESY Trigger: GTAAGATTCTGGAATTTTTCAAAGCCTGATCCGCTT...TCCAAACGTCTTGGCAGTGTTTTGGCTCTTCCACAGGTGAATCCTTAGTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR GCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCACAGGTGACAAGGACATaGTCATTGTTTTCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLDCVSTVNACQSIMQKPQVTRT*SLFSLQ Trigger: CTGGAGTGAAAACAATGAGCATGTCCTTGTCACCTG...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CCA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAAGAATTTCCAACAGTTaGATCCCACACTTTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDCVSTVNACQSIMQKPRISNS*IPHFDS Trigger: ACTGTCAAAGTGTGGGATCCAACTGTTGGAAATTCT...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | GCAAACATTTGCTTTGCGACTTCTGTGAACTCTCCATaGGTATCCTGTCTACTTTTGTGTTGTCTAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ANICFATSVNSP*VSCLLLCCLVF Trigger: AAATACTAGACAACACAAAAGTAGACAGGATACCAATGGAGAGTTCACAGAAGTCGCAAAGCAAATGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| 3UTR CAA 72 bp | ATTAGGATTTCTCTGCCATCAGCGAGGAAGAACATTTaGAAACATAGCAAACATTTGCTTTGCGACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRISLPSARKNI*KHSKHLLCDFC Trigger: ACAGAAGTCGCAAAGCAAATGTTTGCTATGTTTCAAAATGTTCTTCCTCGCTGATGGCAGAGAAATCCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CAA 90 bp | CTTCTGAGCTGGCTCGGAGAGAAAAGGTGCCTGCCACCCAGCTGGAACTCTGGCACAAGGACATGCTCATaGTTTTCACTCCAGGTAACG | + |
|
Preference number: 5 (lower is better) Translates to: LLSWLGEKRCLPPSWNSGTRTCS*FSLQVT Trigger: CGTTACCTGGAGTGAAAACAATGAGCATGTCCTTGT...GCCAGAGTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCGAGCCAGCTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CAA 90 bp | AACAAACATGCTTCATGTGTTCTACATGCCAGGCCTGGTGATGACAGTCTGAGTAGAGGGCCTGTGGCTTaGGCAGTGTCCCAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKHASCVLHARPGDDSLSRGPVA*AVSQSC Trigger: GCAGCTCTGGGACACTGCCAAAGCCACAGGCCCTCT...ACTCAGACTGTCATCACCAGGCCTGGCATGTAGAACACATGAAGCATGTTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS-3UTR CAA 90 bp | CTTCTGAGCTGGCTCGGAGAGAAAAGGTGCCTGCCACCCAGCTGGAACTCTGGCACCACCAAGTTCTCATaGTATTTACACCAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSWLGEKRCLPPSWNSGTTKFS*YLHQSQ Trigger: CTGTGACTGGTGTAAATACAATGAGAACTTGGTGGT...GCCAGAGTTCCAGCTGGGTGGCAGGCACCTTTTCTCTCCGAGCCAGCTCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
||
| CDS CCA 90 bp | TCAGGATTTCCGTCTGATGTGCTGGAATCACAATCCGTACTCCTGTaGTCTTCACATCCCAGATCCTCAGAGTCTGATCTCCTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGFPSDVLESQSVLL*SSHPRSSESDLLRL Trigger: CAGCCTCAGGAGATCAGACTCTGAGGATCTGGGATGTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGGAAATCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS TCA 90 bp | GAGGCGTGGAACGGTGAAAATTTCACCCTCCTGATAGCATATGTGTaGCCGAGAAGTTCAAACACAGGCTGTCGCACATTCCTTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: EAWNGENFTLLIAYV*PRSSNTGCRTFLKS Trigger: GGACTTAAGGAATGTGCGACAGCCTGTGTTTGAACTTCTCGGTCACACATATGCTATCAGGAGGGTGAAATTTTCACCGTTCCACGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS TCA 90 bp | GTGGGGCTCTGGAGACTCAGGTCTAAGCCACAAGTAAACTCTGTGTaGTGCTCCACTGTTTCCAGAAGCGGATCAGGCTTTGAAAAATTC | + |
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Preference number: 5 (lower is better) Translates to: VGLWRLRSKPQVNSV*CSTVSRSGSGFEKF Trigger: GAATTTTTCAAAGCCTGATCCGCTTCTGGAAACAGTGGAGCATCACACAGAGTTTACTTGTGGCTTAGACCTGAGTCTCCAGAGCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS GCA 90 bp | CTCATTGTATTTACACCAGTCACAGCTCAGGATTTCCGTCTGATGTaGTGGAATCACAATCCGTACTCCTGTGGTCTTCACATCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LIVFTPVTAQDFRLM*WNHNPYSCGLHIPD Trigger: ATCTGGGATGTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGGAAATCCTGAGCTGTGACTGGTGTAAATACAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS CCA 90 bp | ATTGTATTTACACCAGTCACAGCTCAGGATTTCCGTCTGATGTGCTaGAATCACAATCCGTACTCCTGTGGTCTTCACATCCCAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: IVFTPVTAQDFRLMC*NHNPYSCGLHIPDP Trigger: AGGATCTGGGATGTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGGAAATCCTGAGCTGTGACTGGTGTAAATACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS TCA 90 bp | AAACTCTGTGTGATGCTCCACTGTTTCCAGAAGCGGATCAGGCTTTaGAAAATTCCAGAATCTTACAGTGAAGTCATAGGAGCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: KLCVMLHCFQKRIRL*KIPESYSEVIGAGG Trigger: GCCTCCTGCTCCTATGACTTCACTGTAAGATTCTGGAATTTTTCAAAGCCTGATCCGCTTCTGGAAACAGTGGAGCATCACACAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS-3UTR CAA 90 bp | GGGTCTAAGGATCTACATGTGGTTTTGCAACAGCTGGCTGTTTTCATTACTATGGCCAGACACAACAAGTaGTTCACCTCTGGTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSKDLHVVLQQLAVFITMARHNK*FTSGLA Trigger: AGCCAAACCAGAGGTGAACAACTTGTTGTGTCTGGC...CATAGTAATGAAAACAGCCAGCTGTTGCAAAACCACATGTAGATCCTTAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS-3UTR CAA 90 bp | GCCAGTATTACCATGAATCTGGAACCATCTGCTGTAGCCTGTAGGGTCTTCAGTGAAGCGGATCAGGCTTaGAAAAATTCCAGAATCTTA | + |
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Preference number: 5 (lower is better) Translates to: ASITMNLEPSAVACRVFSEADQA*KNSRIL Trigger: TAAGATTCTGGAATTTTTCAAAGCCTGATCCGCTTC...ACTGAAGACCCTACAGGCTACAGCAGATGGTTCCAGATTCATGGTAATACTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS-3UTR CAA 90 bp | TCACTAGATTGTGTCAGTACTGTAAATGCTTGCCAAAGCATTATGCAGAAACCAGTGCTCTTTATAGACTaGGAGAGGGCCTGTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLDCVSTVNACQSIMQKPVLFID*ERACGF Trigger: AAAGCCACAGGCCCTCTCCAAGTCTATAAAGAGCAC...TGGTTTCTGCATAATGCTTTGGCAAGCATTTACAGTACTGACACAATCTAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS-3UTR CAA 90 bp | ATGTCCCGCAGGAAGGACTTTTCATCTAGAAGCTACCAAGAGTTCAAAACACATTTGTTCACCTCTGGTTaGGCTCCAATCAACACTATA | + |
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Preference number: 5 (lower is better) Translates to: MSRRKDFSSRSYQEFKTHLFTSG*APINTI Trigger: TATAGTGTTGATTGGAGCCAAACCAGAGGTGAACAA...ATGTGTTTTGAACTCTTGGTAGCTTCTAGATGAAAAGTCCTTCCTGCGGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS TCA 72 bp | ATAGGAGCAGGAGGCCAGCACGGAGGCGTGGAACGGTaGAAATTTCACCCTCCTGATAGCATATGTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: IGAGGQHGGVER*KFHPPDSICVT Trigger: GGTCACACATATGCTATCAGGAGGGTGAAATTTTCACCGTTCCACGCCTCCGTGCTGGCCTCCTGCTCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS CCA 72 bp | CCGTCTGATGTGCTGGAATCACAATCCGTACTCCTGTaGTCTTCACATCCCAGATCCTCAGAGTCTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: PSDVLESQSVLL*SSHPRSSESDL Trigger: GAGATCAGACTCTGAGGATCTGGGATGTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS CCA 72 bp | CATGAGCCAGACACAACAAGTTGTTCACCTCTGGTTTaGCTCCAATCAACACTATACACCTCCTGCGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: HEPDTTSCSPLV*LQSTLYTSCVC Trigger: GCACACGCAGGAGGTGTATAGTGTTGATTGGAGCCAAACCAGAGGTGAACAACTTGTTGTGTCTGGCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS CCA 72 bp | GATCCCATGAGCCAGACACAACAAGTTGTTCACCTCTaGTTTGGCTCCAATCAACACTATACACCTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: DPMSQTQQVVHL*FGSNQHYTPPA Trigger: CGCAGGAGGTGTATAGTGTTGATTGGAGCCAAACCAGAGGTGAACAACTTGTTGTGTCTGGCTCATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS CAA 90 bp | AGCTGCAGTGAGCCATCACCACTACAGGTGACAAGGACATGCTCATaGTTTTCACTCCAGGTAACGTCAAACAAGCCGTCATTCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SCSEPSPLQVTRTCS*FSLQVTSNKPSFQS Trigger: TGACTGGAATGACGGCTTGTTTGACGTTACCTGGAGTGAAAACAATGAGCATGTCCTTGTCACCTGTAGTGGTGATGGCTCACTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS TCA 72 bp | TGGAGACTCAGGTCTAAGCCACAAGTAAACTCTGTGTaGTGCTCCACTGTTTCCAGAAGCGGATCAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: WRLRSKPQVNSV*CSTVSRSGSGF Trigger: AAAGCCTGATCCGCTTCTGGAAACAGTGGAGCATCACACAGAGTTTACTTGTGGCTTAGACCTGAGTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS GCA 72 bp | TTTACACCAGTCACAGCTCAGGATTTCCGTCTGATGTaGTGGAATCACAATCCGTACTCCTGTGGTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FTPVTAQDFRLM*WNHNPYSCGLH Trigger: GTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGGAAATCCTGAGCTGTGACTGGTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS CAA 72 bp | GAGCCATCACCACTACAGGTGACAAGGACATGCTCATaGTTTTCACTCCAGGTAACGTCAAACAAGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: EPSPLQVTRTCS*FSLQVTSNKPS Trigger: TGACGGCTTGTTTGACGTTACCTGGAGTGAAAACAATGAGCATGTCCTTGTCACCTGTAGTGGTGATGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS CCA 72 bp | ATGGCCCCTAAAGGTACACAGAGAATTTCCAACAGTTaGATCCCACTCCTGCGTGTGCTCTTTATAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: MAPKGTQRISNS*IPLLRVLFIDL Trigger: CAAGTCTATAAAGAGCACACGCAGGAGTGGGATCCAACTGTTGGAAATTCTCTGTGTACCTTTAGGGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166511.9 |
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| CDS TCA 72 bp | AACAGTTGGATCCCACACTTTGACAGTTTGATCCCATaGGCCAGACACAACAAGTTGTTCACCTCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: NSWIPHFDSLIP*ARHNKLFTSGL Trigger: CAAACCAGAGGTGAACAACTTGTTGTGTCTGGCTCATGGGATCAAACTGTCAAAGTGTGGGATCCAACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020182.16 |
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| CDS TCA 72 bp | AACGGTGAAAATTTCACCCTCCTGATAGCATATGTGTaGCCGAGAAGTTCAAACACAGGCTGTCGCACATTC | + |
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Preference number: 6 (lower is better) Translates to: NGENFTLLIAYV*PRSSNTGCRTF Trigger: GAATGTGCGACAGCCTGTGTTTGAACTTCTCGGTCACACATATGCTATCAGGAGGGTGAAATTTTCACCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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| CDS TCA 72 bp | GTGATGCTCCACTGTTTCCAGAAGCGGATCAGGCTTTaGAAAATTCCAGAATCTTACAGTGAAGTCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: VMLHCFQKRIRL*KIPESYSEVIG Trigger: TCCTATGACTTCACTGTAAGATTCTGGAATTTTTCAAAGCCTGATCCGCTTCTGGAAACAGTGGAGCATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020182.16 ENSMUST00000166511.9 |
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