Pregenerated sensors for PEX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002763Ensembl transcript IDs: ENSMUST00000002840.9
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCCTCACAAGGGATCTCTaGGAGGAGGCAGCCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPLTRDL*EEAAFR Trigger: CCTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAG...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| 3UTR-3UTR TCA 90 bp | TTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCCCTGCCTCTCCTCCTaGGCACTAGGGGCCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: LFSTPELVSPHRSQAAKPPCLSS*ALGAPT Trigger: AGTGGGGGCCCCTAGTGCTCAGGAGGAGAGGCAGGG...GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| 3UTR GCA 72 bp | TACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTaGCAAGCCCCTAGCTGCCAGCCCTGCCTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: YSRTSVSAQVTG*QAPSCQPCLSS Trigger: GGAGGAGAGGCAGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCAGGAGGACTGCAGGCCTaGAGCGGCGGGCCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QATGGRYLQSGGIGRGQAGGLQA*SGGPGR Trigger: TCTCCCGGGCCCGCCGCTGCAGGCCTGCAGTCCTCC...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCAGCCCGCACAGCGCCGTaGCAGCTGGGGCAGGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: QATGGRYLQSGGIGRGQAARTAP*QLGQVN Trigger: GTTAACCTGCCCCAGCTGGCACGGCGCTGTGCGGGC...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | CCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCGGCGGGGGATGGCTGTaGTCCCGACTCTCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PELVSPHRSQAAKPLAASGGGWL*SRLSWP Trigger: GGGCCAGGAGAGTCGGGATCACAGCCATCCCCCGCC...GCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCAAGCCGGGCTGCAGCCTaGAACAGGTCCTCCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: QATGGRYLQSGGIGRGQASRAAA*NRSSMV Trigger: CACCATGGAGGACCTGTTGCAGGCTGCAGCCCGGCT...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCAGGGCCCGGGAGAAGGTaGCCTGCAGCTTTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QATGGRYLQSGGIGRGQAGPGRR*PAALSP Trigger: TGGAGACAAAGCTGCAGGCCACCTTCTCCCGGGCCC...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGGATCCTGGTGCAGGCTaGCCGGCAGGTATGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQDPGAG*PAGMGQ Trigger: CTGACCCATACCTGCCGGGCAGCCTGCACCAGGATC...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTGCAGGGTCTTGCCAGTaGCTGGGGGCCCATGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPAGSCQ*LGAHGA Trigger: TGCTCCATGGGCCCCCAGGCACTGGCAAGACCCTGC...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGGGGCTGCAGCCGGGCTaGAGCCTGCAACAGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQGLQPG*SLQQVL Trigger: GAGGACCTGTTGCAGGCTGCAGCCCGGCTGCAGCCC...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTTCACTGACTGAGGGCTaGAGCCGGGCTGCAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPSLTEG*SRAAAC Trigger: GCAGGCTGCAGCCCGGCTGCAGCCCTCAGTCAGTGA...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGTCTCCTGGCCCAGTTTaGCCCGCCCGCGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQSPGPV*PARGAQ Trigger: CTGAGCTCCGCGGGCGGGCCAAACTGGGCCAGGAGA...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCGGTCTTCCCGCTGCCTaGGGGACCCTGCAGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PELVSPHRSQAAKPLAASGLPAA*GTLQKH Trigger: GTGCTTCTGCAGGGTCCCCCAGGCAGCGGGAAGACC...GCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTCCGTCTGCACATCGGTaGGCAGGTCCTGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPPSAHR*AGPGHG Trigger: GCCGTGTCCAGGACCTGCCCACCGATGTGCAGACGG...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTCTCAGCACACGCAGCTaGGAGGCCCGGTCCTCACTC | + |
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Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPLSTRS*EARSSL Trigger: GAGTGAGGACCGGGCCTCCCAGCTGCGTGTGCTGAG...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCCCTCCGGGCTGCAGGTaGGGCTTCAGGATAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPPPGCR*GFRIAH Trigger: GTGTGCTATCCTGAAGCCTCACCTGCAGCCCGGAGG...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTGGCCCTACTGCTGTCTaGACAGAGGCTGGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSGPTAV*TEAGAG Trigger: CCCTGCTCCAGCCTCTGTGCAGACAGCAGTAGGGCC...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGTGTCAACAGGAGGACTaGAGGCCTGCAGCGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQCQQED*RPAAAG Trigger: GCCCGCCGCTGCAGGCCTGCAGTCCTCCTGTTGACA...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTAGCCCGCCCACGTCGTaGCAGGACACTGAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSSPPTS*QDTEGI Trigger: GATCCCTTCAGTGTCCTGGCACGACGTGGGCGGGCT...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTCAGAAAGGCACTGGCTaGCCCCTCTGGGGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPQKGTG*PLWGFS Trigger: GGAGAAGCCCCAGAGGGGCCAGCCAGTGCCTTTCTG...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTCAGCCAGAAAGGCACTaGCTGGCCCCTCTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSQPERH*LAPLGL Trigger: AAGCCCCAGAGGGGCCAGCCAGTGCCTTTCTGGCTG...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGCAGCAGCCCTGGCCCTaGCAAACACTTCCCGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQQQPWP*QTLPGH Trigger: ATGTCCGGGAAGTGTTTGCCAGGGCCAGGGCTGCTG...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTGGGCCTGCAGGATACTaGGCCGTTGAGCCTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSGPAGY*AVEPQT Trigger: TGTCTGAGGCTCAACGGCTCAGTATCCTGCAGGCCC...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCACAGGTCCTCCATGGTaGGCAGCAGTGCTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPTGPPW*AAVLSS Trigger: GGAGCTCAGCACTGCTGCTCACCATGGAGGACCTGT...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTTCTCCACGGCCCTACTaGTGTCTGCACAGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSSPRPY*CLHRGW Trigger: CCAGCCTCTGTGCAGACAGCAGTAGGGCCGTGGAGA...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCACAAACACATCCTGGGTaGTGTGGAGCCCATCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QATGGRYLQSGGIGRGQAQTHPG*CGAHPA Trigger: AGCTGGATGGGCTCCACAGCACCCAGGATGTGTTTG...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTGGTAACTCTGCGACCTaGGCCACCCAGACCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSGNSAT*ATQTHS Trigger: CGAATGGGTCTGGGTGGCCCAGGTCGCAGAGTTACC...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCGCTGCTGCCCGGAGTTaGGTCCCAGTCTCTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPAAARS*VPVSQT Trigger: TGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGC...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTCAAGGCCTCCAGGCCTaGAGGAGACAAGCTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSQGLQA*RRQAVP Trigger: TGGGACAGCTTGTCTCCTCCAGGCCTGGAGGCCTTG...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGGGCAGGTTAACCTCCTaGCCTAAGGGAAGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQGRLTS*PKGRWA Trigger: TGCCCACCTTCCCTTAGGCCAGGAGGTTAACCTGCC...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGTCTAGAACCTGGACTTaGGCCAAGCGCGGCTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQSRTWT*AKRGCE Trigger: CTCGCAGCCGCGCTTGGCTCAAGTCCAGGTTCTAGA...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTCACAGCTGGTTCCTGTaGGCAATGTTCCTCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSHSWFL*AMFLRA Trigger: AGCCCGGAGGAACATTGCTCACAGGAACCAGCTGTG...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGAGCTCGGCTAGGAGCTaGGACACAACTCTGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQSSARS*DTTLSI Trigger: GATGGACAGAGTTGTGTCTCAGCTCCTAGCCGAGCT...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGTCCTTCTTCACATCCTaGAGCCCGCCCACGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQSFFTS*SPPTSC Trigger: GCACGACGTGGGCGGGCTGCAGGATGTGAAGAAGGA...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCAGCTTGTCAAATCTaGCAGGCCGCAGAAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PELVSPHRSQAAKPLAASPACQI*QAAEGQ Trigger: CTGCCCTTCTGCGGCCTGGCAGATTTGACAAGCTGG...GCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGTATCGCAACAGCTCCTaGTCACTGACTGAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQYRNSS*SLTEGC Trigger: GCAGCCCTCAGTCAGTGAGCAGGAGCTGTTGCGATA...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGACATCTCCCGCCACCTaGGCAGTCTCTCCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQTSPAT*AVSPGF Trigger: GAAGCCTGGAGAGACTGCCCAGGTGGCGGGAGATGT...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTACTGGCTGGCCCCTCTaGGGCTTCTCCAACCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPTGWPL*GFSNRF Trigger: AAAACGGTTGGAGAAGCCCCAGAGGGGCCAGCCAGT...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCAGGGTCCAGGAGGTCTaGTCTGTTGGTGGCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPRVQEV*SVGGSD Trigger: ATCGGAGCCACCAACAGACCAGACCTCCTGGACCCT...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGTCTGCACCAGTCAGCTaGGGTGGGCAGCAATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQSAPVS*GGQQSS Trigger: GCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGA...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGACCACCCTGGGTGTCTaGAAGTGCCGGTACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQTTLGV*KCRYRT Trigger: TGTCCTGTACCGGCACTTTCAGACACCCAGGGTGGT...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGGCAATCCAGCACGTTTaGCAGGCTCACAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQAIQHV*QAHRGL Trigger: GAGGCCTCTGTGAGCCTGGCAAACGTGCTGGATTGC...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGGCTTCCTTTGTTCTCTaGGGCGATGGAGCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQASFVL*GDGAFQ Trigger: TTGGAAGGCTCCATCGCCCCAGAGAACAAAGGAAGC...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR TCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGGTTCATCAAAGAAGATaGTACAGGGAGCAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQVHQRR*YREQQP Trigger: GGGCTGCTGCTCCCTGTATCATCTTCTTTGATGAAC...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR GCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTAGCAGGCGGCAAACTTaGGTTGGATGCGCTTGTATC | + |
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Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPSRRQT*VGCACI Trigger: GATACAAGCGCATCCAACGCAAGTTTGCCGCCTGCT...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | TTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCAGTCCGTCAGCGAGTaGCTCTCCCGGCTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSTPELVSPHRSQAAKPQSVSE*LSRLLP Trigger: GGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTG...GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGTGTTCCAGAGGCAGCTaGATGGTTTCTAGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQCSRGS*MVSRIS Trigger: GGAGATCCTAGAAACCATCCAGCTGCCTCTGGAACA...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTGGAGGTCTGGTCTGTTaGTGGCTCCGATCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSGGLVC*WLRSQT Trigger: TGTTTGTGATCGGAGCCACCAACAGACCAGACCTCC...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTGCGGCAAACTTGCGTTaGATGCGCTTGTATCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPAANLR*MRLYRN Trigger: GTTGCGATACAAGCGCATCCAACGCAAGTTTGCCGC...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTAATACCTCTGAATTCTaGGCTCTCCCACTTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSNTSEF*ALPLPG Trigger: CCCTGGAAGTGGGAGAGCTCAGAATTCAGAGGTATT...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTTGTTCTCTGGGGCGATaGAGCCTTCCAAATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVSPHRSQAAKPLAASPCSLGR*SLPNTS Trigger: AGAGGTATTTGGAAGGCTCCATCGCCCCAGAGAACA...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTCCAGAGGCAGCTGGATaGTTTCTAGGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSPEAAG*FLGSPS Trigger: AGAAGGAGATCCTAGAAACCATCCAGCTGCCTCTGG...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTCTGGGAGGAGGCAGCCTTCAGGCGACAGGCGGGAGGTACCTTCAGTCCGTTTTCTTCACTTTaGAAAACATCTCCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RDLWEEAAFRRQAGGTFSPFSSL*KTSPAT Trigger: GGTGGCGGGAGATGTTTTTCAAAGTGAAGAAAACGG...ACTGAAGGTACCTCCCGCCTGTCGCCTGAAGGCTGCCTCCTCCCAGAGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCTCGGTGGGCAGGTCCTaGACACGGCTTGTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSTPELVSPHRSQAAKPSVGRS*TRLVVA Trigger: GGCTACCACAAGCCGTGTCCAGGACCTGCCCACCGA...GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR TCA 90 bp | CACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAACAGCTCCTGCTCACTaGCTGAGGGCTGCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFIFYSRTSVSAQVTGCQTAPAH*LRAAAG Trigger: CCCGGCTGCAGCCCTCAGTCAGTGAGCAGGAGCTGT...TTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | AGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCACATTCTCCTCGCTTTaGCCCACATACATGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTSVSAQVTGCQAPSCQPTFSSL*PTYMLM Trigger: CATCAACATGTATGTGGGCCAAAGCGAGGAGAATGT...GGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCACCAGTCAGCTGGGGTaGGCAGCAATCCAGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSTPELVSPHRSQAAKPTSQLG*AAIQHV Trigger: AACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGT...GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR GCA 90 bp | TACACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCCTGCCTGGGGGACCCTaGAGAAGCACACAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTLFSTPELVSPHRSQAALPGGP*RSTQLV Trigger: AACCAGCTGTGTGCTTCTGCAGGGTCCCCCAGGCAG...GGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | TACACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCCAGACCCATTCGCCCTaGAAGAGTCCGAGACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTLFSTPELVSPHRSQAAQTHSP*KSPRLR Trigger: CCGGAGTCTCGGACTCTTCCAGGGCGAATGGGTCTG...GGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCGAGAGAATAGAGATCTaGACCAGTCAGCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSTPELVSPHRSQAAKPERIEI*TSQLGW Trigger: CCACCCCAGCTGACTGGTGCAGATCTCTATTCTCTC...GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CCA 90 bp | CACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAATCACAAACACATCCTaGGTGCTGTGGAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HFIFYSRTSVSAQVTGCQITNTS*VLWSPS Trigger: GGATGGGCTCCACAGCACCCAGGATGTGTTTGTGAT...TTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR GCA 90 bp | TACACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCTCCAGGATCTCAACTTaGCCAGCTGTTGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: YTLFSTPELVSPHRSQAASRIST*PAVDTH Trigger: GTGTGTGTCAACAGCTGGGCAAGTTGAGATCCTGGA...GGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CCA 90 bp | TACACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCGGTCTGGTCTGTTGGTaGCTCCGATCACAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YTLFSTPELVSPHRSQAAGLVCW*LRSQTH Trigger: ATGTGTTTGTGATCGGAGCCACCAACAGACCAGACC...GGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | CCAACAGCGGCCCGACTCGAGGCCCTAGCCCGGGTCCCGGAGCCGTaGCAAGCAACGCCCAGCCCAGGGCCGGGGGACGCCGCACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTAARLEALARVPEP*QATPSPGPGDAAQA Trigger: GGCTTGTGCGGCGTCCCCCGGCCCTGGGCTGGGCGTTGCTTGCCACGGCTCCGGGACCCGGGCTAGGGCCTCGAGTCGGGCCGCTGTTGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | CGGAGCTCAGTCACGGCCAGCCGTGTCCCCGGGCCCAGCAACCCCTaGAGGGCCGGTCGCGTCTCCAACACTCGCGATCCGGGCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSVTASRVPGPSNP*RAGRVSNTRDPGTG Trigger: CCCCGTGCCCGGATCGCGAGTGTTGGAGACGCGACCGGCCCTGCAGGGGTTGCTGGGCCCGGGGACACGGCTGGCCGTGACTGAGCTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | CGTCGCTGGCCACGGGCCCCCGGGAGGCAACAGCACCGCCAACGGTaGTGTCTCCGTCGGGAAGGGGTCCAGGACGCGCAGGACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRWPRAPGRQQHRQR*CLRREGVQDAQDSQ Trigger: TTGGCTGTCCTGCGCGTCCTGGACCCCTTCCCGACGGAGACACCACCGTTGGCGGTGCTGTTGCCTCCCGGGGGCCCGTGGCCAGCGACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | GAAGCTGCAAAGGACGACACTACGGGCGGGGGCGGGGGATGGCTGTaGTCCCGACTCTCCTGGCCCAGTTTGGCCCGCCCGCGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EAAKDDTTGGGGGWL*SRLSWPSLARPRSS Trigger: TGAGCTCCGCGGGCGGGCCAAACTGGGCCAGGAGAGTCGGGATCACAGCCATCCCCCGCCCCCGCCCGTAGTGTCGTCCTTTGCAGCTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | CCCGGCCCAGGAGGTCCACAGCTGTCAACAGGAGGACTGCAGGCCTaGAGCGGCGGGCCCGGGAGAAGGTGGCCTGCAGCTTTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPGGPQLSTGGLQA*SGGPGRRWPAALSP Trigger: TGGAGACAAAGCTGCAGGCCACCTTCTCCCGGGCCCGCCGCTGCAGGCCTGCAGTCCTCCTGTTGACAGCTGTGGACCTCCTGGGCCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GCGGGCAGAAACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTGCTaGCCGGAGTTGGGTCCCAGTCTCTCAGACAGCTCCCAGCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRNTSPSASGSPGC*PELGPSLSDSSQRG Trigger: ACCGCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTTTCTGCCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GTGGCGGGCAGAAACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTaGTGCCCGGAGTTGGGTCCCAGTCTCTCAGACAGCTCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VAGRNTSPSASGSPG*CPELGPSLSDSSQR Trigger: GCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTTTCTGCCCGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GCTGGAGCAGGGCACCTTCAGCAAATGGAGCCCAAGGCGGCTGCATaGAGCCGTGACGGCTGTGGTCTTCCCGCTGCCTGGGGGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAGHLQQMEPKAAA*SRDGCGLPAAWGTL Trigger: CAGGGTCCCCCAGGCAGCGGGAAGACCACAGCCGTCACGGCTGCATGCAGCCGCCTTGGGCTCCATTTGCTGAAGGTGCCCTGCTCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS-3UTR CAA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTCTCTCCTGGCCCAGTTaGGCCCGCCCGCGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ELVSPHRSQAAKPLAASPLSWPS*ARPRSS Trigger: TGAGCTCCGCGGGCGGGCCAAACTGGGCCAGGAGAG...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | AGGGCACCTTCAGCAAATGGAGCCCAAGGCGGCTGCATGCAGCCGTaGCGGCTGTGGTCTTCCCGCTGCCTGGGGGACCCTGCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPSANGAQGGCMQP*RLWSSRCLGDPAEA Trigger: TGCTTCTGCAGGGTCCCCCAGGCAGCGGGAAGACCACAGCCGTCACGGCTGCATGCAGCCGCCTTGGGCTCCATTTGCTGAAGGTGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGGGCTGCTGCCCGGAGTaGGGTCCCAGTCTCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQGCCPE*GPSLSD Trigger: GTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCC...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | ACTCAAACCACCTGCCGAGCCCGAGGCTCTGATCCTGGTGCAGGCTaGCCGGCAGGTATGGGTCAGAAGGGCATAGAGGTCCCCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQTTCRARGSDPGAG*PAGMGQKGIEVPHH Trigger: GTGGTGGGGGACCTCTATGCCCTTCTGACCCATACCTGCCGGGCAGCCTGCACCAGGATCAGAGCCTCGGGCTCGGCAGGTGGTTTGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS GCA 90 bp | AACAGCTCCTGCTCACTGACTGAGGGCTGCAGCCGGGCTGCAGCCTaGAACAGGTCCTCCATGGTGAGCAGCAGTGCTGAGCTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSCSLTEGCSRAAA*NRSSMVSSSAELRS Trigger: GCTGCGGAGCTCAGCACTGCTGCTCACCATGGAGGACCTGTTGCAGGCTGCAGCCCGGCTGCAGCCCTCAGTCAGTGAGCAGGAGCTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GAGTTGGGTAACTCTGCGACCTGGGCCACCCAGACCCATTCGCCCTaGAAGAGTCCGAGACTCCGGAGACAGCTCCGGCTCACACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELGNSATWATQTHSP*KSPRLRRQLRLTPS Trigger: GCTGGGTGTGAGCCGGAGCTGTCTCCGGAGTCTCGGACTCTTCCAGGGCGAATGGGTCTGGGTGGCCCAGGTCGCAGAGTTACCCAACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | ACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTGCTGCCCGGAGTTaGGTCCCAGTCTCTCAGACAGCTCCCAGCGCGGTTCTAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TPVRQRVALPAAARS*VPVSQTAPSAVLEP Trigger: AGGTTCTAGAACCGCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | ACAAAGCCCGCACAGCGCCGTGCCAGCTGGGGCAGGTTAACCTCCTaGCCTAAGGGAAGGTGGGCAGTGAGGGCCTGCAGGATACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKPAQRRASWGRLTS*PKGRWAVRACRILS Trigger: GCTCAGTATCCTGCAGGCCCTCACTGCCCACCTTCCCTTAGGCCAGGAGGTTAACCTGCCCCAGCTGGCACGGCGCTGTGCGGGCTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GCGGTTCTAGAACCTGGACTTGAGCCAAGCGCGGCTGCGAGGAGTTaGGTAACTCTGCGACCTGGGCCACCCAGACCCATTCGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLEPGLEPSAAARS*VTLRPGPPRPIRPG Trigger: TCCAGGGCGAATGGGTCTGGGTGGCCCAGGTCGCAGAGTTACCCAACTCCTCGCAGCCGCGCTTGGCTCAAGTCCAGGTTCTAGAACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | AAGGCGGCTGCATGCAGCCGTGACGGCTGTGGTCTTCCCGCTGCCTaGGGGACCCTGCAGAAGCACACAGCTGGTTCCTGTGAGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KAAACSRDGCGLPAA*GTLQKHTAGSCEQC Trigger: ACATTGCTCACAGGAACCAGCTGTGTGCTTCTGCAGGGTCCCCCAGGCAGCGGGAAGACCACAGCCGTCACGGCTGCATGCAGCCGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTTCAGTGGCTACGGCCTaGGCCAGCAGGGTCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELVSPHRSQAAKPLAASPSVATA*ASRVLP Trigger: TGGCAAGACCCTGCTGGCCAAGGCCGTAGCCACTGA...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | TGGATGCGCTTGTATCGCAACAGCTCCTGCTCACTGACTGAGGGCTaGAGCCGGGCTGCAGCCTGCAACAGGTCCTCCATGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WMRLYRNSSCSLTEG*SRAAACNRSSMVSS Trigger: GCTGCTCACCATGGAGGACCTGTTGCAGGCTGCAGCCCGGCTGCAGCCCTCAGTCAGTGAGCAGGAGCTGTTGCGATACAAGCGCATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GCCTCCAGCTTGAACTTCCGTGTGATGGCGCTCAGCACACGCAGCTaGGAGGCCCGGTCCTCACTCGCCCCTACAAACACCAGCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSLNFRVMALSTRS*EARSSLAPTNTSLS Trigger: TGACAAGCTGGTGTTTGTAGGGGCGAGTGAGGACCGGGCCTCCCAGCTGCGTGTGCTGAGCGCCATCACACGGAAGTTCAAGCTGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGGGCCCCCACTAGGGCTCACAAGGGATCTCTGGGAGGAGGCAGCCTTCAGAGCAATCCAGCACGTTaGCCAGGCTCACAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPTRAHKGSLGGGSLQSNPAR*PGSQRP Trigger: AGGCCTCTGTGAGCCTGGCAAACGTGCTGGATTGCT...CTGAAGGCTGCCTCCTCCCAGAGATCCCTTGTGAGCCCTAGTGGGGGCCCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | ATGAGAGGAGGGCACCTGCTGAGAGCGTCCTCATCAAGGAGGAGATaGCGGAGTGTGGCCGCAACACGGGCATCCTCACCCAGTCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRGGHLLRASSSRRR*RSVAATRASSPSPS Trigger: AGACGGACTGGGTGAGGATGCCCGTGTTGCGGCCACACTCCGTCATCTCCTCCTTGATGAGGACGCTCTCAGCAGGTGCCCTCCTCTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | CTGGGGGCCCATGGAGCAGAAGGCCTGATCGTCTTAGGCCCAGGCTaGGCAGCTCAGGGTGTTCCAGAGGCAGCTGGATGGTTTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGAHGAEGLIVLGPG*AAQGVPEAAGWFLG Trigger: TCCTAGAAACCATCCAGCTGCCTCTGGAACACCCTGAGCTGCTCAGCCTGGGCCTAAGACGATCAGGCCTTCTGCTCCATGGGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | ATTAAAAGCCAGAGTGGCGGGCAGAAACACCAGTCCGTCAGCGAGTaGCTCTCCCGGCTGCTGCCCGGAGTTGGGTCCCAGTCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IKSQSGGQKHQSVSE*LSRLLPGVGSQSLR Trigger: TCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTTTCTGCCCGCCACTCTGGCTTTTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GCACATGACTCAGGGCGGTGCCAGCCAGGTATAAAGAGGTGTGGGTaGTATCAGCCAGAAAGGCACTGGCTGGCCCCTCTGGGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AHDSGRCQPGIKRCG*YQPERHWLAPLGLL Trigger: GAGAAGCCCCAGAGGGGCCAGCCAGTGCCTTTCTGGCTGATACCACCCACACCTCTTTATACCTGGCTGGCACCGCCCTGAGTCATGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCGACAGGCGGGAGGTACCTTCAGTCAGGGGGCATAGGCAGAGGGCAGGCACAACTTGCCCAGCTGTaGACACACACAACACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QATGGRYLQSGGIGRGQAQLAQL*THTTHP Trigger: GGGATGTGTTGTGTGTGTCAACAGCTGGGCAAGTTG...TGCCTGCCCTCTGCCTATGCCCCCTGACTGAAGGTACCTCCCGCCTGTCGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GTTTCTAGGATCTCCTTCTTCACATCCTGCAGCCCGCCCACGTCGTaGCAGGACACTGAAGGGATCCTGGGTGCTCCCACAGCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSRISFFTSCSPPTS*QDTEGILGAPTAWE Trigger: CTCCCAAGCTGTGGGAGCACCCAGGATCCCTTCAGTGTCCTGGCACGACGTGGGCGGGCTGCAGGATGTGAAGAAGGAGATCCTAGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GAGATCTGCACCAGTCAGCTGGGGTGGGCAGCAATCCAGCACGTTTaGCAGGCTCACAGAGGCCTCCAGCTTGAACTTCCGTGTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EICTSQLGWAAIQHV*QAHRGLQLELPCDG Trigger: GCCATCACACGGAAGTTCAAGCTGGAGGCCTCTGTGAGCCTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | CGTCTTAGGCCCAGGCTGAGCAGCTCAGGGTGTTCCAGAGGCAGCTaGATGGTTTCTAGGATCTCCTTCTTCACATCCTGCAGCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLRPRLSSSGCSRGS*MVSRISFFTSCSPP Trigger: GGGCGGGCTGCAGGATGTGAAGAAGGAGATCCTAGAAACCATCCAGCTGCCTCTGGAACACCCTGAGCTGCTCAGCCTGGGCCTAAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GGCGTCAGAGCAGAGAGAATAGAGATCTGCACCAGTCAGCTGGGGTaGGCAGCAATCCAGCACGTTTGCCAGGCTCACAGAGGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVRAERIEICTSQLG*AAIQHVCQAHRGLQ Trigger: CTGGAGGCCTCTGTGAGCCTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGATCTCTATTCTCTCTGCTCTGACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | CGCCACCTGGGCAGTCTCTCCAGGCTTCCTTCCAGGATCTCAACTTaGCCAGCTGTTGACACACACAACACATCCCCTTCCTGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RHLGSLSRLPSRIST*PAVDTHNTSPSWTT Trigger: GGTGGTCCAGGAAGGGGATGTGTTGTGTGTGTCAACAGCTGGGCAAGTTGAGATCCTGGAAGGAAGCCTGGAGAGACTGCCCAGGTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | GGAGGTCTGGTCTGTTGGTGGCTCCGATCACAAACACATCCTGGGTaGTGTGGAGCCCATCCAGCTCGGCTAGGAGCTGAGACACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GGLVCWWLRSQTHPG*CGAHPARLGAETQL Trigger: GAGTTGTGTCTCAGCTCCTAGCCGAGCTGGATGGGCTCCACAGCACCCAGGATGTGTTTGTGATCGGAGCCACCAACAGACCAGACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCTACAAACACCAGCTaGTCAAATCTGCCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTSVSAQVTGCQAPSCQPTNTS*SNLPGR Trigger: GCGGCCTGGCAGATTTGACAAGCTGGTGTTTGTAGG...CTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 90 bp | GCAGCCCTGGCCCTGGCAAACACTTCCCGGACATTCTCCTCGCTTTaGCCCACATACATGTTGATGAGCTCCGGTCCCTTTACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AALALANTSRTFSSL*PTYMLMSSGPFTLR Trigger: CCTCAGTGTAAAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGTGTTTGCCAGGGCCAGGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | CAGTCTCTCCAGGCTTCCTTCCAGGATCTCAACTTGCCCAGCTGTTaGCACACACAACACATCCCCTTCCTGGACCACCCTGGGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSLQASFQDLNLPSC*HTQHIPFLDHPGCL Trigger: CAGACACCCAGGGTGGTCCAGGAAGGGGATGTGTTGTGTGTGTCAACAGCTGGGCAAGTTGAGATCCTGGAAGGAAGCCTGGAGAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | AGCACACAGCTGGTTCCTGTGAGCAATGTTCCTCCGGGCTGCAGGTaGGGCTTCAGGATAGCACACAGCTCATTTACCAAGGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STQLVPVSNVPPGCR*GFRIAHSSFTKASR Trigger: CCTGGAGGCCTTGGTAAATGAGCTGTGTGCTATCCTGAAGCCTCACCTGCAGCCCGGAGGAACATTGCTCACAGGAACCAGCTGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 90 bp | AGCTCCGCAGCTCTAGCCCTTCCTCTAGGTCTCGAACCCTGCGTTTaGGGGCAGTCATCATGGCGTCAGAGCAGAGAGAATAGAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAALALPLGLEPCV*GQSSWRQSRENRDL Trigger: CAGATCTCTATTCTCTCTGCTCTGACGCCATGATGACTGCCCTCAAACGCAGGGTTCGAGACCTAGAGGAAGGGCTAGAGCTGCGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 90 bp | TTTGAGGGCAGTCATCATGGCGTCAGAGCAGAGAGAATAGAGATCTaGACCAGTCAGCTGGGGTGGGCAGCAATCCAGCACGTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FEGSHHGVRAERIEI*TSQLGWAAIQHVCQ Trigger: CTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGATCTCTATTCTCTCTGCTCTGACGCCATGATGACTGCCCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | GAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGCCCCTAGCTGCCAGCCCTACCGTTTTCTTCACTTaGAAAAACATCTCCCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELVSPHRSQAAKPLAASPTVFFT*KNISRH Trigger: GTGGCGGGAGATGTTTTTCAAAGTGAAGAAAACGGT...AGGGCTGGCAGCTAGGGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGGCGGCAAACTTGCGTaGGATGCGCTTGTATCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HFIFYSRTSVSAQVTGCQGGKLA*DALVSQ Trigger: TTGCGATACAAGCGCATCCAACGCAAGTTTGCCGCC...TTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAATGGCCCACATACATGTaGATGAGCTCCGGTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HFIFYSRTSVSAQVTGCQWPTYM*MSSGPF Trigger: AAAGGGACCGGAGCTCATCAACATGTATGTGGGCCA...TTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTATTTTCTACTCCAGAACTAGTGTCTCCGCACAGGTCACAGGCTGCCAAGACATTCTCCTCGCTTaGGCCCACATACATGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HFIFYSRTSVSAQVTGCQDILLA*AHIHVD Trigger: ATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTC...TTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAAATAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | GTCACGGCCAGCCGTGTCCCCGGGCCCAGCAACCCCTaGAGGGCCGGTCGCGTCTCCAACACTCGCGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTASRVPGPSNP*RAGRVSNTRDP Trigger: CGGATCGCGAGTGTTGGAGACGCGACCGGCCCTGCAGGGGTTGCTGGGCCCGGGGACACGGCTGGCCGTGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | CCACGGGCCCCCGGGAGGCAACAGCACCGCCAACGGTaGTGTCTCCGTCGGGAAGGGGTCCAGGACGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRAPGRQQHRQR*CLRREGVQDAQ Trigger: CTGCGCGTCCTGGACCCCTTCCCGACGGAGACACCACCGTTGGCGGTGCTGTTGCCTCCCGGGGGCCCGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | GGGGATGGCTGTGATCCCGACTCTCCTGGCCCAGTTTaGCCCGCCCGCGGAGCTCAGTCACGGCCAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDGCDPDSPGPV*PARGAQSRPAV Trigger: CACGGCTGGCCGTGACTGAGCTCCGCGGGCGGGCCAAACTGGGCCAGGAGAGTCGGGATCACAGCCATCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CAA 90 bp | CTGCAGGCCTGCAGCGGCGGGCCCGGGAGAAGGTGGCCTGCAGCTTaGTCTCCACGGCCCTACTGCTGTCTGCACAGAGGCTGGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQACSGGPGRRWPAA*SPRPYCCLHRGWSR Trigger: CCTGCTCCAGCCTCTGTGCAGACAGCAGTAGGGCCGTGGAGACAAAGCTGCAGGCCACCTTCTCCCGGGCCCGCCGCTGCAGGCCTGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | GTCCCTCCCAGAACCCCTCGGAGTCGCCGGACCGAGTaGGAAGCTGCAAAGGACGACACTACGGGCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VPPRTPRSRRTE*EAAKDDTTGGG Trigger: GCCCCCGCCCGTAGTGTCGTCCTTTGCAGCTTCCCACTCGGTCCGGCGACTCCGAGGGGTTCTGGGAGGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | GGACTGCAGGCCTGCAGCGGCGGGCCCGGGAGAAGGTaGCCTGCAGCTTTGTCTCCACGGCCCTACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLQACSGGPGRR*PAALSPRPYCC Trigger: ACAGCAGTAGGGCCGTGGAGACAAAGCTGCAGGCCACCTTCTCCCGGGCCCGCCGCTGCAGGCCTGCAGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CAA 72 bp | CCGTCAGCGAGTGGCTCTCCCGGCTGCTGCCCGGAGTaGGGTCCCAGTCTCTCAGACAGCTCCCAGCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSASGSPGCCPE*GPSLSDSSQRG Trigger: ACCGCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | CGTCAGCGAGTGGCTCTCCCGGCTGCTGCCCGGAGTTaGGTCCCAGTCTCTCAGACAGCTCCCAGCGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQRVALPAAARS*VPVSQTAPSAV Trigger: AACCGCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | CAGAGTGGCGGGCAGAAACACCAGTCCGTCAGCGAGTaGCTCTCCCGGCTGCTGCCCGGAGTTGGGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSGGQKHQSVSE*LSRLLPGVGSQ Trigger: CTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTTTCTGCCCGCCACTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | GCACAGCGCCGTGCCAGCTGGGGCAGGTTAACCTCCTaGCCTAAGGGAAGGTGGGCAGTGAGGGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQRRASWGRLTS*PKGRWAVRACR Trigger: CCTGCAGGCCCTCACTGCCCACCTTCCCTTAGGCCAGGAGGTTAACCTGCCCCAGCTGGCACGGCGCTGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | GGGCACCTTCAGCAAATGGAGCCCAAGGCGGCTGCATaGAGCCGTGACGGCTGTGGTCTTCCCGCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHLQQMEPKAAA*SRDGCGLPAAW Trigger: CCAGGCAGCGGGAAGACCACAGCCGTCACGGCTGCATGCAGCCGCCTTGGGCTCCATTTGCTGAAGGTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CCA 72 bp | TCCCCCACCACAAAGCCCGCACAGCGCCGTGCCAGCTaGGGCAGGTTAACCTCCTGGCCTAAGGGAAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPTTKPAQRRAS*GRLTSWPKGRW Trigger: CCACCTTCCCTTAGGCCAGGAGGTTAACCTGCCCCAGCTGGCACGGCGCTGTGCGGGCTTTGTGGTGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS TCA 72 bp | CCTCCTCACTCAAACCACCTGCCGAGCCCGAGGCTCTaGTCCTGGTGCAGGCTGCCCGGCAGGTATGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPHSNHLPSPRL*SWCRLPGRYGS Trigger: TGACCCATACCTGCCGGGCAGCCTGCACCAGGATCAGAGCCTCGGGCTCGGCAGGTGGTTTGAGTGAGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS GCA 72 bp | AACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTGCTaGCCGGAGTTGGGTCCCAGTCTCTCAGACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NTSPSASGSPGC*PELGPSLSDSS Trigger: GGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | ACCTGCCGAGCCCGAGGCTCTGATCCTGGTGCAGGCTaGCCGGCAGGTATGGGTCAGAAGGGCATAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TCRARGSDPGAG*PAGMGQKGIEV Trigger: GACCTCTATGCCCTTCTGACCCATACCTGCCGGGCAGCCTGCACCAGGATCAGAGCCTCGGGCTCGGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | AACTCTGCGACCTGGGCCACCCAGACCCATTCGCCCTaGAAGAGTCCGAGACTCCGGAGACAGCTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NSATWATQTHSP*KSPRLRRQLRL Trigger: GAGCCGGAGCTGTCTCCGGAGTCTCGGACTCTTCCAGGGCGAATGGGTCTGGGTGGCCCAGGTCGCAGAGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | AAGCGCGGCTGCGAGGAGTTGGGTAACTCTGCGACCTaGGCCACCCAGACCCATTCGCCCTGGAAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRGCEELGNSAT*ATQTHSPWKSP Trigger: CGGACTCTTCCAGGGCGAATGGGTCTGGGTGGCCCAGGTCGCAGAGTTACCCAACTCCTCGCAGCCGCGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CCA 72 bp | GCATGCAGCCGTGACGGCTGTGGTCTTCCCGCTGCCTaGGGGACCCTGCAGAAGCACACAGCTGGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACSRDGCGLPAA*GTLQKHTAGSC Trigger: ACAGGAACCAGCTGTGTGCTTCTGCAGGGTCCCCCAGGCAGCGGGAAGACCACAGCCGTCACGGCTGCATGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CAA 90 bp | AACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTGCTGCCCGGAGTaGGGTCCCAGTCTCTCAGACAGCTCCCAGCGCGGTTCTAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: NTSPSASGSPGCCPE*GPSLSDSSQRGSRT Trigger: GGTTCTAGAACCGCGCTGGGAGCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | AGAAACACCAGTCCGTCAGCGAGTGGCTCTCCCGGCTaGTGCCCGGAGTTGGGTCCCAGTCTCTCAGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNTSPSASGSPG*CPELGPSLSDS Trigger: GCTGTCTGAGAGACTGGGACCCAACTCCGGGCAGCAGCCGGGAGAGCCACTCGCTGACGGACTGGTGTTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CCA 72 bp | GAACCTGGACTTGAGCCAAGCGCGGCTGCGAGGAGTTaGGTAACTCTGCGACCTGGGCCACCCAGACCCATT | + |
|
Preference number: 6 (lower is better) Translates to: EPGLEPSAAARS*VTLRPGPPRPI Trigger: AATGGGTCTGGGTGGCCCAGGTCGCAGAGTTACCCAACTCCTCGCAGCCGCGCTTGGCTCAAGTCCAGGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | TTGAACTTCCGTGTGATGGCGCTCAGCACACGCAGCTaGGAGGCCCGGTCCTCACTCGCCCCTACAAACACC | + |
|
Preference number: 6 (lower is better) Translates to: LNFRVMALSTRS*EARSSLAPTNT Trigger: GGTGTTTGTAGGGGCGAGTGAGGACCGGGCCTCCCAGCTGCGTGTGCTGAGCGCCATCACACGGAAGTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 72 bp | CAGGGTGGGGACCTTCCTGAAGGCAGCGATGGCACATaGCTCAGGGCGGTGCCAGCCAGGTATAAAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QGGDLPEGSDGT*LRAVPARYKEV Trigger: CACCTCTTTATACCTGGCTGGCACCGCCCTGAGTCATGTGCCATCGCTGCCTTCAGGAAGGTCCCCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 72 bp | CATGGAGCAGAAGGCCTGATCGTCTTAGGCCCAGGCTaGGCAGCTCAGGGTGTTCCAGAGGCAGCTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: HGAEGLIVLGPG*AAQGVPEAAGW Trigger: CCATCCAGCTGCCTCTGGAACACCCTGAGCTGCTCAGCCTGGGCCTAAGACGATCAGGCCTTCTGCTCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | ATCTCCTTCTTCACATCCTGCAGCCCGCCCACGTCGTaGCAGGACACTGAAGGGATCCTGGGTGCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ISFFTSCSPPTS*QDTEGILGAPT Trigger: TGTGGGAGCACCCAGGATCCCTTCAGTGTCCTGGCACGACGTGGGCGGGCTGCAGGATGTGAAGAAGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | ACCAGTCAGCTGGGGTGGGCAGCAATCCAGCACGTTTaGCAGGCTCACAGAGGCCTCCAGCTTGAACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSQLGWAAIQHV*QAHRGLQLELP Trigger: CGGAAGTTCAAGCTGGAGGCCTCTGTGAGCCTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | TTGTATCGCAACAGCTCCTGCTCACTGACTGAGGGCTaGAGCCGGGCTGCAGCCTGCAACAGGTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LYRNSSCSLTEG*SRAAACNRSSM Trigger: CATGGAGGACCTGTTGCAGGCTGCAGCCCGGCTGCAGCCCTCAGTCAGTGAGCAGGAGCTGTTGCGATACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | TCAGGGCGGTGCCAGCCAGGTATAAAGAGGTGTGGGTaGTATCAGCCAGAAAGGCACTGGCTGGCCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGRCQPGIKRCG*YQPERHWLAPL Trigger: CAGAGGGGCCAGCCAGTGCCTTTCTGGCTGATACCACCCACACCTCTTTATACCTGGCTGGCACCGCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CAA 72 bp | TCCAGCACGTTTGCCAGGCTCACAGAGGCCTCCAGCTaGAACTTCCGTGTGATGGCGCTCAGCACACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTFARLTEASS*NFRVMALSTRS Trigger: GCTGCGTGTGCTGAGCGCCATCACACGGAAGTTCAAGCTGGAGGCCTCTGTGAGCCTGGCAAACGTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 72 bp | TCAGACAGCTCCCAGCGCGGTTCTAGAACCTGGACTTaGGCCAAGCGCGGCTGCGAGGAGTTGGGTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDSSQRGSRTWT*AKRGCEELGNS Trigger: AGAGTTACCCAACTCCTCGCAGCCGCGCTTGGCTCAAGTCCAGGTTCTAGAACCGCGCTGGGAGCTGTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS TCA 72 bp | TGGGTGCTGTGGAGCCCATCCAGCTCGGCTAGGAGCTaGGACACAACTCTGTCCATCACCCCTCCAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: WVLWSPSSSARS*DTTLSITPPES Trigger: AGATTCTGGAGGGGTGATGGACAGAGTTGTGTCTCAGCTCCTAGCCGAGCTGGATGGGCTCCACAGCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CAA 90 bp | GCAGTCTCTCCAGGCTTCCTTCCAGGATCTCAACTTGCCCAGCTGTaGACACACACAACACATCCCCTTCCTGGACCACCCTGGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVSPGFLPGSQLAQL*THTTHPLPGPPWVS Trigger: AGACACCCAGGGTGGTCCAGGAAGGGGATGTGTTGTGTGTGTCAACAGCTGGGCAAGTTGAGATCCTGGAAGGAAGCCTGGAGAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CAA 90 bp | AGCAGCCCTGGCCCTGGCAAACACTTCCCGGACATTCTCCTCGCTTaGGCCCACATACATGTTGATGAGCTCCGGTCCCTTTACACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPGPGKHFPDILLA*AHIHVDELRSLYTE Trigger: CTCAGTGTAAAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGTGTTTGCCAGGGCCAGGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS GCA 72 bp | TTCCTGAAGGCAGCGATGGCACATGACTCAGGGCGGTaGCAGCCAGGTATAAAGAGGTGTGGGTGGTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLKAAMAHDSGR*QPGIKRCGWYQ Trigger: CTGATACCACCCACACCTCTTTATACCTGGCTGGCACCGCCCTGAGTCATGTGCCATCGCTGCCTTCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
||
| CDS CCA 72 bp | GCAGAGAGAATAGAGATCTGCACCAGTCAGCTGGGGTaGGCAGCAATCCAGCACGTTTGCCAGGCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: AERIEICTSQLG*AAIQHVCQAHR Trigger: TCTGTGAGCCTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGATCTCTATTCTCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CAA 72 bp | GGCCCTGGCAAACACTTCCCGGACATTCTCCTCGCTTaGGCCCACATACATGTTGATGAGCTCCGGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GPGKHFPDILLA*AHIHVDELRSL Trigger: AAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGTGTTTGCCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS TCA 72 bp | GCTCTAGCCCTTCCTCTAGGTCTCGAACCCTGCGTTTaGGGGCAGTCATCATGGCGTCAGAGCAGAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: ALALPLGLEPCV*GQSSWRQSREN Trigger: ATTCTCTCTGCTCTGACGCCATGATGACTGCCCTCAAACGCAGGGTTCGAGACCTAGAGGAAGGGCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS GCA 72 bp | AGTCATCATGGCGTCAGAGCAGAGAGAATAGAGATCTaGACCAGTCAGCTGGGGTGGGCAGCAATCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SHHGVRAERIEI*TSQLGWAAIQH Trigger: GTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCAGATCTCTATTCTCTCTGCTCTGACGCCATGATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CCA 72 bp | GCCCTGGCAAACACTTCCCGGACATTCTCCTCGCTTTaGCCCACATACATGTTGATGAGCTCCGGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALANTSRTFSSL*PTYMLMSSGPF Trigger: AAAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGTGTTTGCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CAA 72 bp | AGCTCTAGCCCTTCCTCTAGGTCTCGAACCCTGCGTTaGAGGGCAGTCATCATGGCGTCAGAGCAGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSPSSRSRTLR*RAVIMASEQRE Trigger: TTCTCTCTGCTCTGACGCCATGATGACTGCCCTCAAACGCAGGGTTCGAGACCTAGAGGAAGGGCTAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CAA 90 bp | GCAAACACTTCCCGGACATTCTCCTCGCTTTGGCCCACATACATGTaGATGAGCTCCGGTCCCTTTACACTGAGGAAGGTGAGGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ANTSRTFSSLWPTYM*MSSGPFTLRKVRLH Trigger: GTGCAGCCTCACCTTCCTCAGTGTAAAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGTGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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| CDS CAA 72 bp | TCCCGGACATTCTCCTCGCTTTGGCCCACATACATGTaGATGAGCTCCGGTCCCTTTACACTGAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRTFSSLWPTYM*MSSGPFTLRKV Trigger: CACCTTCCTCAGTGTAAAGGGACCGGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002840.9 |
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