Pregenerated sensors for PEX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005069Ensembl transcript IDs: ENSMUST00000035861.6, ENSMUST00000080557.12, ENSMUST00000112530.8, ENSMUST00000112531.8, ENSMUST00000112532.8
Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTGGCGTCGCACAGATGCTCAGGGGAGCCTCTTACACACAACTaGCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGC | + |
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Preference number: 1 (lower is better) Translates to: QLASHRCSGEPLTHN*PRKLDCYQFPGRWG Trigger: GCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGTTGTGTGTAAGAGGCTCCCCTGAGCATCTGTGCGACGCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR CCA 90 bp | ACAGATGCTCAGGGGAGCCTCTTACACACAACTGCCCAAGGAAGCTaGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTA | + |
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Preference number: 1 (lower is better) Translates to: TDAQGSLLHTTAQGS*TVTNSQEDGARRDL Trigger: TAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGTTGTGTGTAAGAGGCTCCCCTGAGCATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR GCA 90 bp | TCCCTTGGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTaGTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SLGWEFGKNATSEPG*YKSLFSSYFQVSQE Trigger: TTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACCAAGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATCCAGGCCACCTGCAGTaGCAAGCCCTGGCCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PHTETVETSPAAPSESLHPGHLQ*QALALR Trigger: CCTCAGGGCCAGGGCTTGTCACTGCAGGTGGCCTGG...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGCCAGGCCACCTGCAGTaGCAAGCCCTGGCCCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGPGHLQ*QALALR Trigger: CCTCAGGGCCAGGGCTTGTCACTGCAGGTGGCCTGG...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATATAGGCCAGGCCACCTaGAGTGACAAGCCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PHTETVETSPAAPSESLHIGQAT*SDKPWP Trigger: GGGCCAGGGCTTGTCACTGCAGGTGGCCTGGCCTAT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGCTTGGTAGGCCCGTTTaGGGAGAGGGAGTCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: LPKEAGLLPIPRKMGQGELGRPV*GEGVTP Trigger: GGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAG...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGACAAGCCCTGGCCCTaGGGACAGTACAGTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: PHTETVETSPAAPSESLHDKPWP*GQYSNH Trigger: GTGGTTACTGTACTGTCCTCAGGGCCAGGGCTTGTC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATAGGTCGTACCGCTTGTaGTCATCAGCCCACCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PHTETVETSPAAPSESLHRSYRL*SSAHPL Trigger: AAGGGGGTGGGCTGATGACCACAAGCGGTACGACCT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGCCAGGCCACCTGCAGTaGCAAGCCCTGGCCCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLFSSYFQVSQEERTAVLPGHLQ*QALALR Trigger: CCTCAGGGCCAGGGCTTGTCACTGCAGGTGGCCTGG...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCTTGGTAGGCCCGTTTaGGGAGAGGGAGTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: KEAGLLPIPRKMGQGETYLGRPV*GEGVTP Trigger: GGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCCAGGCCACCTGCAGTaGCAAGCCCTGGCCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KSLFSSYFQVSQEERTAVPGHLQ*QALALR Trigger: CCTCAGGGCCAGGGCTTGTCACTGCAGGTGGCCTGG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATACTGCCCAAGGAAGCTaGACTGTTACCAATTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PHTETVETSPAAPSESLHTAQGS*TVTNSQ Trigger: CTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGATAGGCCAGGCCACCTaGAGTGACAAGCCCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LNQVATRVCLVPTSKSPKIGQAT*SDKPWP Trigger: GGGCCAGGGCTTGTCACTGCAGGTGGCCTGGCCTAT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAGGTCGTACCGCTTGTaGTCATCAGCCCACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: ALELPRDRDSSSLQLSRTRSYRL*SSAHPL Trigger: AAGGGGGTGGGCTGATGACCACAAGCGGTACGACCT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGACTGCCCAAGGAAGCTaGACTGTTACCAATTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGTAQGS*TVTNSQ Trigger: CTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGCTTGGTAGGCCCGTTTaGGGAGAGGGAGTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: LNQVATRVCLVPTSKSPKLGRPV*GEGVTP Trigger: GGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAG...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGACAAGCCCTGGCCCTaGGGACAGTACAGTAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LNQVATRVCLVPTSKSPKDKPWP*GQYSNH Trigger: GTGGTTACTGTACTGTCCTCAGGGCCAGGGCTTGTC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGACAAGCCCTGGCCCTaGGGACAGTACAGTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: GWEFGKNATSEPGCYKSLDKPWP*GQYSNH Trigger: GTGGTTACTGTACTGTCCTCAGGGCCAGGGCTTGTC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAGGTCGTACCGCTTGTaGTCATCAGCCCACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LNQVATRVCLVPTSKSPKRSYRL*SSAHPL Trigger: AAGGGGGTGGGCTGATGACCACAAGCGGTACGACCT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGGCTCATTCCACAAATaGACCTCCCTCCCCCATAGG | + |
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Preference number: 2 (lower is better) Translates to: GWEFGKNATSEPGCYKSLGSFHK*TSLPHR Trigger: CCTATGGGGGAGGGAGGTTCATTTGTGGAATGAGCC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAACTTGGTAGGCCCGTTTaGGGAGAGGGAGTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: NATSEPGCYKSLFSSYFQLGRPV*GEGVTP Trigger: GGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAG...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGTGGGTAGACAGCCCTTaGATTACCAAGGGACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLFSSYFQVSQEERTAVLWVDSP*ITKGQR Trigger: TCTCTGTCCCTTGGTAATTCAAGGGCTGTCTACCCA...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATGGCTCATTCCACAAATaGACCTCCCTCCCCCATAGG | + |
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Preference number: 2 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNGSFHK*TSLPHR Trigger: CCTATGGGGGAGGGAGGTTCATTTGTGGAATGAGCC...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCCTCTTACACACAACTaGCCAAGGAAGCTGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: KSLFSSYFQVSQEERTAVPLTHN*PRKLDC Trigger: ACAGTCCAGCTTCCTTGGGCAGTTGTGTGTAAGAGG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGACTTCTGAACCAGGTTaGTACAAGAGTTTGTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGTSEPG*YKSLFS Trigger: ACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAAGGTCGTACCGCTTGTaGTCATCAGCCCACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: NATSEPGCYKSLFSSYFQRSYRL*SSAHPL Trigger: AAGGGGGTGGGCTGATGACCACAAGCGGTACGACCT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGCAATTCCCAGGAAGATaGGGCAAGGAGAGACTTACA | + |
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Preference number: 2 (lower is better) Translates to: SLFSSYFQVSQEERTAVLQFPGR*GKERLT Trigger: TGTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTG...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGACTGCCCAAGGAAGCTaGACTGTTACCAATTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KSLFSSYFQVSQEERTAVTAQGS*TVTNSQ Trigger: CTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR CAA 90 bp | GAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTaGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: EFGKNATSEPGCYKS*FSSYFQVSQEERTA Trigger: TGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR TCA 72 bp | TGTCCACCCACAGAAGATCCATGCTCGCTCCCGGAGTaGCCGAGCTGCGAGCACTTGTTCCAAGTTCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: CPPTEDPCSLPE*PSCEHLFQVRL Trigger: GAGCCGAACTTGGAACAAGTGCTCGCAGCTCGGTCACTCCGGGAGCGAGCATGGATCTTCTGTGGGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGCATCAGCCCACCCCCTaGGTAGGCCCGTTTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEHQPTP*VGPFEE Trigger: CTCCTCAAACGGGCCTACCAAGGGGGTGGGCTGATG...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGAGAGGTCGTACCGCTaGTGGTCATCAGCCCACCCC | + |
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Preference number: 3 (lower is better) Translates to: PHTETVETSPAAPSESLHERSYR*WSSAHP Trigger: GGGGTGGGCTGATGACCACAAGCGGTACGACCTCTC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGCATCAGCCCACCCCCTaGGTAGGCCCGTTTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGHQPTP*VGPFEE Trigger: CTCCTCAAACGGGCCTACCAAGGGGGTGGGCTGATG...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR CCA 72 bp | CAGGGGAGCCTCTTACACACAACTGCCCAAGGAAGCTaGACTGTTACCAATTCCCAGGAAGATGGGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: QGSLLHTTAQGS*TVTNSQEDGAR Trigger: CCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGTTGTGTGTAAGAGGCTCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR CCA 72 bp | TTATGGGGGTCTGTGCATCTCCCCACACAGAAACAGTaGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LWGSVHLPTQKQ*RRLQLLPQNPF Trigger: GAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGGAGATGCACAGACCCCCATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGCTGGGTAGACAGCCCTaGAATTACCAAGGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LPKEAGLLPIPRKMGQGELGRQP*NYQGTE Trigger: CTCTGTCCCTTGGTAATTCAAGGGCTGTCTACCCAG...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR TCA 72 bp | ACAAGCCCTGGCCCTGAGGACAGTACAGTAACCACATaGGCATCTGCTGCTTCAGTGTCCACCCACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TSPGPEDSTVTT*ASAASVSTHRR Trigger: TCTTCTGTGGGTGGACACTGAAGCAGCAGATGCTCATGTGGTTACTGTACTGTCCTCAGGGCCAGGGCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| 3UTR GCA 72 bp | TCGCACAGATGCTCAGGGGAGCCTCTTACACACAACTaGCCAAGGAAGCTGGACTGTTACCAATTCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SHRCSGEPLTHN*PRKLDCYQFPG Trigger: TCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAGTTGTGTGTAAGAGGCTCCCCTGAGCATCTGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGCATCAGCCCACCCCCTaGGTAGGCCCGTTTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNQVATRVCLVPTSKSPKHQPTP*VGPFEE Trigger: CTCCTCAAACGGGCCTACCAAGGGGGTGGGCTGATG...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATCCCTTGGTTGGGAATTaGGCAAGAATGCAACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHTETVETSPAAPSESLHPLVGN*ARMQLL Trigger: CAGAAGTTGCATTCTTGCCAAATTCCCAACCAAGGG...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATCATCAGCCCACCCCCTaGGTAGGCCCGTTTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNHQPTP*VGPFEE Trigger: CTCCTCAAACGGGCCTACCAAGGGGGTGGGCTGATG...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR TCA 72 bp | ACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTaGCCGTATCACTACTGTCGCATCTCTGGGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: TSKSPKKRGLQC*PYHYCRISGLI Trigger: AATGAGCCCAGAGATGCGACAGTAGTGATACGGTCAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGGTTGCTACAAGAGTTaGTTTAGTTCCTACTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PHTETVETSPAAPSESLHGCYKS*FSSYFQ Trigger: TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGCTGGGTAGACAGCCCTaGAATTACCAAGGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNQVATRVCLVPTSKSPKLGRQP*NYQGTE Trigger: CTCTGTCCCTTGGTAATTCAAGGGCTGTCTACCCAG...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGGGTTGCTACAAGAGTTaGTTTAGTTCCTACTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGGCYKS*FSSYFQ Trigger: TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACC...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAACTGGGTAGACAGCCCTaGAATTACCAAGGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NATSEPGCYKSLFSSYFQLGRQP*NYQGTE Trigger: CTCTGTCCCTTGGTAATTCAAGGGCTGTCTACCCAG...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR GCA 72 bp | TGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTaGTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: WEFGKNATSEPG*YKSLFSSYFQV Trigger: GACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGNGLCC*GSRRPG Trigger: CCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTT...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCGCCCACTGTTCTGCCTaGGCTCCGCCCGACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLAHCSA*APPDPA Trigger: TGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGC...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCGGCCTCAGTCCCTCCTaGCGAAGGGCCTTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLGLSPS*RRALSW Trigger: CCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCC...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCATCCCAAGATGCGCTTaGTGGGGCCTGCCCCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGIPRCA*WGLPRS Trigger: CGACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGAT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAATCCCAAGATGCGCTTaGTGGGGCCTGCCCCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGIPRCA*WGLPRS Trigger: CGACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGAT...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCACTCCCCGCTCAGGTTaGAGAGGACTCCCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLTPRSG*RGLPGH Trigger: GTGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGT...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCACTCCCCGCTCAGGTTaGAGAGGACTCCCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGTPRSG*RGLPGH Trigger: GTGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAGACTCCAGGGACACCTaGCCCTCGCCAATCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRADSRDT*PSPICR Trigger: GCGGCAGATTGGCGAGGGGCAGGTGTCCCTGGAGTC...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGGPCPG*NGWPAS Trigger: TGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCC...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLGPCPG*NGWPAS Trigger: TGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCC...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCTCCACAGCCTCACGGTaGGCTCCCAGGTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLSTASR*APRLMQ Trigger: CTGCATCAACCTGGGAGCTCACCGTGAGGCTGTGGA...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCCATTCTCGGCCTGGGTaGTGCCCAGGTACTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGHSRPG*CPGTAK Trigger: CTTGGCAGTACCTGGGCACCACCCAGGCCGAGAATG...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRAGPCPG*NGWPAS Trigger: TGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCC...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCACACCAGGGGCTCTCTaGGGAGCCTGGCGAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLTPGAL*GAWRKF Trigger: AAACTTTCGCCAGGCTCCTCAGAGAGCCCCTGGTGT...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCTGCTGCCCACTGTTCTaGCTGAGCTCCGCCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPCCPLF*LSSARP Trigger: GGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCA...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCATCTCGGCCTGGGTGGTaGCCAGGTACTGCCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRASRPGW*PGTAKL Trigger: AAGCTTGGCAGTACCTGGGCACCACCCAGGCCGAGA...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAATCCCGAGCATCGGCTaGCCCATAGGCATCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRAIPSIG*PIGIAL Trigger: CAGAGCGATGCCTATGGGGCAGCCGATGCTCGGGAT...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGATCCCATTGGCCAGGGTaGCCCCAAGCTTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGSHWPG*PQACST Trigger: TGTGGAACAAGCTTGGGGCCACCCTGGCCAATGGGA...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACGCTCTGGCCTAACATaGATAACGCCAAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGRSGLT*ITPSAG Trigger: CCCTGCGCTTGGCGTTATCCATGTTAGGCCAGAGCG...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCTTCTTCAAAAGGCTaGGGGTGGTCACGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGPSSKG*GWSRKG Trigger: TCCCTTGCGTGACCACCCTCAGCCTTTTGAAGAAGG...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAAAGTCACTGGCTGTGTaGTGCAGGTCCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGKSLAV*CRSSSG Trigger: TCCTGAGGAGGACCTGCAGCACACAGCCAGTGACTT...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAAGTCACTGGCTGTGTaGTGCAGGTCCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGKSLAV*CRSSSG Trigger: TCCTGAGGAGGACCTGCAGCACACAGCCAGTGACTT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAAGGGCTCGGCGGTATaGAGCCACTGCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGKGSAV*SHCFFT Trigger: AGTGAAGAAGCAGTGGCTGCATACCGCCGAGCCCTT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAGAGCAACACAGCATTaGGCAGGTCTCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGRATQH*AGLPPP Trigger: TGGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAAACGTCTCACAGGCCTaGCGCTGCAGGGACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRANVSQA*RCRDSL Trigger: CAATGAGTCCCTGCAGCGCCAGGCCTGTGAGACGTT...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPGPCPG*NGWPAS Trigger: TGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCC...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAGCTCCGCCCGACCCTaGAGCCGACTCCAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGESSARP*SRLQGH Trigger: GTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAGTGGTGCCCAGGTACTaGCAAGCTTCCATGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGVVPRY*QASMCL Trigger: TAAGCACATGGAAGCTTGGCAGTACCTGGGCACCAC...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCATCCCGAGCATCGGCTaGCCCATAGGCATCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPIPSIG*PIGIAL Trigger: CAGAGCGATGCCTATGGGGCAGCCGATGCTCGGGAT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGLSWVK*VASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAA...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGATTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGLSWVK*VASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAA...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAGTAGAGGATCCTTCCTaGTCTCCCAACCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGVEDPS*SPNHSF Trigger: GAAGCTGTGGTTGGGAGACCAGGAAGGATCCTCTAC...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGNGLCC*GSRRPG Trigger: CCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCGTCCTGCAGGAATTCTaGCACCAACTCGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLVLQEF*HQLVFS Trigger: ACTGAAGACGAGTTGGTGTCAGAATTCCTGCAGGAC...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGGCCCACTGTTCTGCCTaGGCTCCGCCCGACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGAHCSA*APPDPA Trigger: TGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGC...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCATCAACCCAGGCCTCTaGCGTGCCCTCAGAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPINPGL*RALRVS Trigger: GCTAACTCTGAGGGCACGTCAGAGGCCTGGGTTGAT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080557.12 ENSMUST00000112531.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGAGCTCCGCCCGACCCTaGAGCCGACTCCAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGSSARP*SRLQGH Trigger: GTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATTGCTGCCCACTGTTCTaGCTGAGCTCCGCCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHCCPLF*LSSARP Trigger: GGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCA...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCCTGCTGTATAAACTCTaGTGCCCACTGTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGLLYKL*CPLFCL Trigger: CAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAG...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAGTGGTGCCCAGGTACTaGCAAGCTTCCATGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRAVVPRY*QASMCL Trigger: TAAGCACATGGAAGCTTGGCAGTACCTGGGCACCAC...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAATAGCCAAGAGCTCTTaGTCATTCTCGGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRAIAKSS*SFSAWV Trigger: CACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTAT...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATATCCCAAGATGCGCTTaGTGGGGCCTGCCCCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHIPRCA*WGLPRS Trigger: CGACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGAT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCACTACTCCCAAAGGCTTaGAAACGGTCTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRALLPKA*KRSLLL Trigger: CAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAG...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCTCCCATTGGCCAGGGTaGCCCCAAGCTTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPSHWPG*PQACST Trigger: TGTGGAACAAGCTTGGGGCCACCCTGGCCAATGGGA...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAACTGCTTCTTCACTCTaGTTCCCATTGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRATASSL*FPLARV Trigger: CACCCTGGCCAATGGGAACCAGAGTGAAGAAGCAGT...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCCGCTCTGGCCTAACATaGATAACGCCAAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPRSGLT*ITPSAG Trigger: CCCTGCGCTTGGCGTTATCCATGTTAGGCCAGAGCG...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGAAGGTCCTCCTCAGGATaGTATTCATCGTACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGRSSSG*YSSYHR Trigger: TCGATGGTACGATGAATATCATCCTGAGGAGGACCT...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCCCTTCTTCAAAAGGCTaGGGGTGGTCACGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPPSSKG*GWSRKG Trigger: TCCCTTGCGTGACCACCCTCAGCCTTTTGAAGAAGG...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCAGCCAGCGCCATCAGTaGTGTCCGGTTATCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPSQRHQ*CPVIWL Trigger: AAGCCAGATAACCGGACAGCACTGATGGCGCTGGCT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGATCGGCGATGAATTCTTaGGACCAGTCGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVGPFEERESHPERGSAMNS*DQSVSL Trigger: TAATGAGACCGACTGGTCCCAAGAATTCATCGCCGA...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYNGLCC*GSRRPG Trigger: CCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTT...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGACTCCCCGCTCAGGTTaGAGAGGACTCCCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGTPRSG*RGLPGH Trigger: GTGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAGTTGCATTCTGGTCCTaGAGGAATTCTGACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERESHPERGPLQADTHRAVAFWS*RNSDTN Trigger: GTTGGTGTCAGAATTCCTGCAGGACCAGAATGCAAC...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCAGCTTCTCCTCAGACTaGTCCAGATACTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPSFSSD*SRYSSA Trigger: GGCTGAGGAGTATCTGGAGCAGTCTGAGGAGAAGCT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATTCTCGGCCTGGGTGGTaGCCAGGTACTGCCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHSRPGW*PGTAKL Trigger: AAGCTTGGCAGTACCTGGGCACCACCCAGGCCGAGA...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATATCCCGAGCATCGGCTaGCCCATAGGCATCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHIPSIG*PIGIAL Trigger: CAGAGCGATGCCTATGGGGCAGCCGATGCTCGGGAT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHRRALS*VKWVAS Trigger: GCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCG...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCGTAGAGGATCCTTCCTaGTCTCCCAACCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPVEDPS*SPNHSF Trigger: GAAGCTGTGGTTGGGAGACCAGGAAGGATCCTCTAC...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGCATTCTCGGCCTGGGTaGTGCCCAGGTACTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEHSRPG*CPGTAK Trigger: CTTGGCAGTACCTGGGCACCACCCAGGCCGAGAATG...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTNGLCC*GSRRPG Trigger: CCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCGTTCAAATTCCACCTaGAGGGCAGCTATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLRSNST*RAAILF Trigger: AAACAAAATAGCTGCCCTTCAGGTGGAATTTGAACG...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCCGTTCAAATTCCACCTaGAGGGCAGCTATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEGVTPRARTPPSRHSQGRSNST*RAAILF Trigger: AAACAAAATAGCTGCCCTTCAGGTGGAATTTGAACG...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGTCCACAGCCTCACGGTaGGCTCCCAGGTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGSTASR*APRLMQ Trigger: CTGCATCAACCTGGGAGCTCACCGTGAGGCTGTGGA...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGTCTCGGCCTGGGTGGTaGCCAGGTACTGCCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGSRPGW*PGTAKL Trigger: AAGCTTGGCAGTACCTGGGCACCACCCAGGCCGAGA...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGGACTCCAGGGACACCTaGCCCTCGCCAATCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGDSRDT*PSPISE Trigger: CTCTGAGATTGGCGAGGGGCAGGTGTCCCTGGAGTC...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112530.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGTCCCATTGGCCAGGGTaGCCCCAAGCTTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGESHWPG*PQACST Trigger: TGTGGAACAAGCTTGGGGCCACCCTGGCCAATGGGA...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGACACCAGGGGCTCTCTaGGGAGCCTGGCGAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGTPGAL*GAWRKF Trigger: AAACTTTCGCCAGGCTCCTCAGAGAGCCCCTGGTGT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCAGGTCCTCCTCAGGATaGTATTCATCGTACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPRSSSG*YSSYHR Trigger: TCGATGGTACGATGAATATCATCCTGAGGAGGACCT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGCCTTCTTCAAAAGGCTaGGGGTGGTCACGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEPSSKG*GWSRKG Trigger: TCCCTTGCGTGACCACCCTCAGCCTTTTGAAGAAGG...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAAGTCACTGGCTGTGTaGTGCAGGTCCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEKSLAV*CRSSSG Trigger: TCCTGAGGAGGACCTGCAGCACACAGCCAGTGACTT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCATCCCAAGATGCGCTTaGTGGGGCCTGCCCCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTIPRCA*WGLPRS Trigger: CGACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGAT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAGAGCAACACAGCATTaGGCAGGTCTCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGERATQH*AGLPPP Trigger: TGGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGAACGTCTCACAGGCCTaGCGCTGCAGGGACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGNVSQA*RCRDSL Trigger: CAATGAGTCCCTGCAGCGCCAGGCCTGTGAGACGTT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVNGLCC*GSRRPG Trigger: CCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGCCCACTGTTCTGCCTaGGCTCCGCCCGACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKAHCSA*APPDPA Trigger: TGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGTGCCCCTCGCCAATCTaGCGCACGAATTTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGCPSPI*RTNFRN Trigger: GTTCCTGAAATTCGTGCGGCAGATTGGCGAGGGGCA...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGATAGCCAAGAGCTCTTaGTCATTCTCGGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEIAKSS*SFSAWV Trigger: CACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTAT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHLSWVK*VASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAA...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCACAAGAGTTGCATTCTaGTCCTGCAGGAATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPTRVAF*SCRNSD Trigger: GTCAGAATTCCTGCAGGACCAGAATGCAACTCTTGT...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCACTCTGGTTCCCATTaGCCAGGGTGGCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYHSGSH*PGWPQA Trigger: AGCTTGGGGCCACCCTGGCCAATGGGAACCAGAGTG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGTCCTGCAGGAATTCTaGCACCAACTCGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHVLQEF*HQLVFS Trigger: ACTGAAGACGAGTTGGTGTCAGAATTCCTGCAGGAC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCCGTTCAAATTCCACCTaGAGGGCAGCTATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTLRQLLRGRTACGHQPRSNST*RAAILF Trigger: AAACAAAATAGCTGCCCTTCAGGTGGAATTTGAACG...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCTCCACAGCCTCACGGTaGGCTCCCAGGTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTSTASR*APRLMQ Trigger: CTGCATCAACCTGGGAGCTCACCGTGAGGCTGTGGA...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGGCCTCAGTCCCTCCTaGCGAAGGGCCTTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLGLSPS*RRALSW Trigger: CCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGGGCCTCAGTCCCTCCTaGCGAAGGGCCTTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVGLSPS*RRALSW Trigger: CCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCC...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGACTGTTCAATCTCCTaGATCTCTGCCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHDCSIS*ISARRS Trigger: TGACCTCCTGGCAGAGATGCAGGAGATTGAACAGTC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGACTCCAGGGACACCTaGCCCTCGCCAATCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLDSRDT*PSPICR Trigger: GCGGCAGATTGGCGAGGGGCAGGTGTCCCTGGAGTC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGATCCCAAGATGCGCTTaGTGGGGCCTGCCCCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLIPRCA*WGLPRS Trigger: CGACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGAT...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGLSWVK*VASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAA...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTRRALS*VKWVAS Trigger: GCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCG...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGGTAGAGGATCCTTCCTaGTCTCCCAACCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGVEDPS*SPNHSF Trigger: GAAGCTGTGGTTGGGAGACCAGGAAGGATCCTCTAC...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCAGCTATTTTGTTTCCTaGTCTTGTAAACTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLVGPFEERESHPERGPLSYFVS*SCKLIN Trigger: GTTGATCAGTTTACAAGACCAGGAAACAAAATAGCT...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCCATTCTCGGCCTGGGTaGTGCCCAGGTACTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTHSRPG*CPGTAK Trigger: CTTGGCAGTACCTGGGCACCACCCAGGCCGAGAATG...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACAACGTCTCACAGGCCTaGCGCTGCAGGGACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYNVSQA*RCRDSL Trigger: CAATGAGTCCCTGCAGCGCCAGGCCTGTGAGACGTT...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACTCCCATTGGCCAGGGTaGCCCCAAGCTTGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYSHWPG*PQACST Trigger: TGTGGAACAAGCTTGGGGCCACCCTGGCCAATGGGA...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCCACTCTGGTTCCCATTaGCCAGGGTGGCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTHSGSH*PGWPQA Trigger: AGCTTGGGGCCACCCTGGCCAATGGGAACCAGAGTG...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR CAA 72 bp | CTATCAGAAACGGCAGATGACAACTCCCCTATGTCATaGGGTCCGACCCAAGAAGCAGCACCAAGAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSETADDNSPMS*GPTQEAAPRKG Trigger: GCCCTTTCTTGGTGCTGCTTCTTGGGTCGGACCCAATGACATAGGGGAGTTGTCATCTGCCGTTTCTGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAGGTCCTCCTCAGGATaGTATTCATCGTACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGERSSSG*YSSYHR Trigger: TCGATGGTACGATGAATATCATCCTGAGGAGGACCT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCCTTCTTCAAAAGGCTaGGGGTGGTCACGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYPSSKG*GWSRKG Trigger: TCCCTTGCGTGACCACCCTCAGCCTTTTGAAGAAGG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGACTCCCCGCTCAGGTTaGAGAGGACTCCCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKTPRSG*RGLPGH Trigger: GTGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGGACTGTTCAATCTCCTaGATCTCTGCCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGDCSIS*ISARRS Trigger: TGACCTCCTGGCAGAGATGCAGGAGATTGAACAGTC...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATTGCTGCCCACTGTTCTaGCTGAGCTCCGCCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNCCPLF*LSSARP Trigger: GGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCA...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGCTGCTGTATAAACTCTaGTGCCCACTGTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGLLYKL*CPLFCL Trigger: CAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAG...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACAAGGGCTCGGCGGTATaGAGCCACTGCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYKGSAV*SHCFFT Trigger: AGTGAAGAAGCAGTGGCTGCATACCGCCGAGCCCTT...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATTCGGCGATGAATTCTTaGGACCAGTCGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHSAMNS*DQSVSL Trigger: TAATGAGACCGACTGGTCCCAAGAATTCATCGCCGA...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACAGCTTCTCCTCAGACTaGTCCAGATACTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYSFSSD*SRYSSA Trigger: GGCTGAGGAGTATCTGGAGCAGTCTGAGGAGAAGCT...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACGTGGTGCCCAGGTACTaGCAAGCTTCCATGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYVVPRY*QASMCL Trigger: TAAGCACATGGAAGCTTGGCAGTACCTGGGCACCAC...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGTCTCGGCCTGGGTGGTaGCCAGGTACTGCCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKSRPGW*PGTAKL Trigger: AAGCTTGGCAGTACCTGGGCACCACCCAGGCCGAGA...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLRRALS*VKWVAS Trigger: GCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCG...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKRRALS*VKWVAS Trigger: GCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCG...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCTACTCCCAAAGGCTTaGAAACGGTCTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYLLPKA*KRSLLL Trigger: CAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGTCGGCGATGAATTCTTaGGACCAGTCGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGSAMNS*DQSVSL Trigger: TAATGAGACCGACTGGTCCCAAGAATTCATCGCCGA...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAGAGCAACACAGCATTaGGCAGGTCTCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTRATQH*AGLPPP Trigger: TGGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCATTCTCGGCCTGGGTaGTGCCCAGGTACTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVHSRPG*CPGTAK Trigger: CTTGGCAGTACCTGGGCACCACCCAGGCCGAGAATG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGCATTCTCGGCCTGGGTaGTGCCCAGGTACTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLHSRPG*CPGTAK Trigger: CTTGGCAGTACCTGGGCACCACCCAGGCCGAGAATG...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCACTCTGGTTCCCATTaGCCAGGGTGGCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVHSGSH*PGWPQA Trigger: AGCTTGGGGCCACCCTGGCCAATGGGAACCAGAGTG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGCACTCTGGTTCCCATTaGCCAGGGTGGCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKHSGSH*PGWPQA Trigger: AGCTTGGGGCCACCCTGGCCAATGGGAACCAGAGTG...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATATCAGACTCTATAGCTaGCTTGGCTCGTTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHIRLYS*LGSFKF Trigger: GAATTTGAACGAGCCAAGTCAGCTATAGAGTCTGAT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGATCAACCCAGGCCTCTaGCGTGCCCTCAGAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVINPGL*RALRVS Trigger: GCTAACTCTGAGGGCACGTCAGAGGCCTGGGTTGAT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080557.12 ENSMUST00000112531.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAGCTTCTCCTCAGACTaGTCCAGATACTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTSFSSD*SRYSSA Trigger: GGCTGAGGAGTATCTGGAGCAGTCTGAGGAGAAGCT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCTGTATAAACTCTGCTaGCCACTGTTCTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYLYKLC*PLFCLS Trigger: GCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCTGCTGTATAAACTCTaGTGCCCACTGTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYLLYKL*CPLFCL Trigger: CAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGAGCCAGCGCCATCAGTaGTGTCCGGTTATCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFSSYFQVSQEERTAVLSQRHQ*CPVIWL Trigger: AAGCCAGATAACCGGACAGCACTGATGGCGCTGGCT...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGAAGGGCTCGGCGGTATaGAGCCACTGCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLFSSYFQVSQEERTAVLKGSAV*SHCFFT Trigger: AGTGAAGAAGCAGTGGCTGCATACCGCCGAGCCCTT...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATCACTCTGGTTCCCATTaGCCAGGGTGGCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNHSGSH*PGWPQA Trigger: AGCTTGGGGCCACCCTGGCCAATGGGAACCAGAGTG...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCACTGCTTCTTCACTCTaGTTCCCATTGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTTASSL*FPLARV Trigger: CACCCTGGCCAATGGGAACCAGAGTGAAGAAGCAGT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCGCTCTGGCCTAACATaGATAACGCCAAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVRSGLT*ITPSAG Trigger: CCCTGCGCTTGGCGTTATCCATGTTAGGCCAGAGCG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGCGCTCTGGCCTAACATaGATAACGCCAAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLRSGLT*ITPSAG Trigger: CCCTGCGCTTGGCGTTATCCATGTTAGGCCAGAGCG...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR TCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATACACCAGGGGCTCTCTaGGGAGCCTGGCGAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNTPGAL*GAWRKF Trigger: AAACTTTCGCCAGGCTCCTCAGAGAGCCCCTGGTGT...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR TCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACAGGTCCTCCTCAGGATaGTATTCATCGTACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYRSSSG*YSSYHR Trigger: TCGATGGTACGATGAATATCATCCTGAGGAGGACCT...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR TCA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGATCAGACTCTATAGCTaGCTTGGCTCGTTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGIRLYS*LGSFKF Trigger: GAATTTGAACGAGCCAAGTCAGCTATAGAGTCTGAT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR TCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCCTTCTTCAAAAGGCTaGGGGTGGTCACGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVPSSKG*GWSRKG Trigger: TCCCTTGCGTGACCACCCTCAGCCTTTTGAAGAAGG...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCGACTGTTCAATCTCCTaGATCTCTGCCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTDCSIS*ISARRS Trigger: TGACCTCCTGGCAGAGATGCAGGAGATTGAACAGTC...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGAAGTCACTGGCTGTGTaGTGCAGGTCCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVKSLAV*CRSSSG Trigger: TCCTGAGGAGGACCTGCAGCACACAGCCAGTGACTT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGAAGTCACTGGCTGTGTaGTGCAGGTCCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLKSLAV*CRSSSG Trigger: TCCTGAGGAGGACCTGCAGCACACAGCCAGTGACTT...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAGCCAGCGCCATCAGTaGTGTCCGGTTATCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKSQRHQ*CPVIWL Trigger: AAGCCAGATAACCGGACAGCACTGATGGCGCTGGCT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGCTACTCCCAAAGGCTTaGAAACGGTCTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFSSYFQVSQEERTAVLLLPKA*KRSLLL Trigger: CAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAG...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGAGAGCAACACAGCATTaGGCAGGTCTCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVRATQH*AGLPPP Trigger: TGGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQGPCPG*NGWPAS Trigger: TGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCC...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAGGTCCTCCTCAGGATaGTATTCATCGTACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTRSSSG*YSSYHR Trigger: TCGATGGTACGATGAATATCATCCTGAGGAGGACCT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAATCCACAGCCTCACGGTaGGCTCCCAGGTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQSTASR*APRLMQ Trigger: CTGCATCAACCTGGGAGCTCACCGTGAGGCTGTGGA...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGTCTGACGTGCCCTGCTaGTGTATAAACTCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVSDVPC*CINSAA Trigger: GGCAGCAGAGTTTATACAGCAGCAGGGCACGTCAGA...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTCTGACGTGCCCTGCTaGTGTATAAACTCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLSDVPC*CINSAA Trigger: GGCAGCAGAGTTTATACAGCAGCAGGGCACGTCAGA...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAATCTCGGCCTGGGTGGTaGCCAGGTACTGCCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQSRPGW*PGTAKL Trigger: AAGCTTGGCAGTACCTGGGCACCACCCAGGCCGAGA...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGATAGCCAAGAGCTCTTaGTCATTCTCGGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKIAKSS*SFSAWV Trigger: CACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTAT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGATAGCCAAGAGCTCTTaGTCATTCTCGGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLIAKSS*SFSAWV Trigger: CACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTAT...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAATCCCGAGCATCGGCTaGCCCATAGGCATCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQIPSIG*PIGIAL Trigger: CAGAGCGATGCCTATGGGGCAGCCGATGCTCGGGAT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKLSWVK*VASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAA...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGGTAGAGGATCCTTCCTaGTCTCCCAACCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVVEDPS*SPNHSF Trigger: GAAGCTGTGGTTGGGAGACCAGGAAGGATCCTCTAC...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATAGAGCAACACAGCATTaGGCAGGTCTCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNRATQH*AGLPPP Trigger: TGGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCT...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGACTGCTTCTTCACTCTaGTTCCCATTGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKTASSL*FPLARV Trigger: CACCCTGGCCAATGGGAACCAGAGTGAAGAAGCAGT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGACTGCTTCTTCACTCTaGTTCCCATTGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVTASSL*FPLARV Trigger: CACCCTGGCCAATGGGAACCAGAGTGAAGAAGCAGT...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGTCCTGCAGGAATTCTaGCACCAACTCGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLVLQEF*HQLVFS Trigger: ACTGAAGACGAGTTGGTGTCAGAATTCCTGCAGGAC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGTCCTGCAGGAATTCTaGCACCAACTCGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKVLQEF*HQLVFS Trigger: ACTGAAGACGAGTTGGTGTCAGAATTCCTGCAGGAC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGGTCCTGCAGGAATTCTaGCACCAACTCGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLFSSYFQVSQEERTAVVLQEF*HQLVFS Trigger: ACTGAAGACGAGTTGGTGTCAGAATTCCTGCAGGAC...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAACACCAGGGGCTCTCTaGGGAGCCTGGCGAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQTPGAL*GAWRKF Trigger: AAACTTTCGCCAGGCTCCTCAGAGAGCCCCTGGTGT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACCGTTCAAATTCCACCTaGAGGGCAGCTATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEAGLLPIPRKMGQGETYRSNST*RAAILF Trigger: AAACAAAATAGCTGCCCTTCAGGTGGAATTTGAACG...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATAGCTTCTCCTCAGACTaGTCCAGATACTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNSFSSD*SRYSSA Trigger: GGCTGAGGAGTATCTGGAGCAGTCTGAGGAGAAGCT...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGCTGTATAAACTCTGCTaGCCACTGTTCTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLLYKLC*PLFCLS Trigger: GCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAG...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATGTGGTGCCCAGGTACTaGCAAGCTTCCATGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNVVPRY*QASMCL Trigger: TAAGCACATGGAAGCTTGGCAGTACCTGGGCACCAC...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCACAAGAGTTGCATTCTaGTCCTGCAGGAATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTTRVAF*SCRNSD Trigger: GTCAGAATTCCTGCAGGACCAGAATGCAACTCTTGT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATAGCTATTTTGTTTCCTaGTCTTGTAAACTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHTETVETSPAAPSESLHSYFVS*SCKLIN Trigger: GTTGATCAGTTTACAAGACCAGGAAACAAAATAGCT...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAGCTATTTTGTTTCCTaGTCTTGTAAACTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKEAGLLPIPRKMGQGESYFVS*SCKLIN Trigger: GTTGATCAGTTTACAAGACCAGGAAACAAAATAGCT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAAACGTCTCACAGGCCTaGCGCTGCAGGGACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQNVSQA*RCRDSL Trigger: CAATGAGTCCCTGCAGCGCCAGGCCTGTGAGACGTT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATACTGCTTCTTCACTCTaGTTCCCATTGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNTASSL*FPLARV Trigger: CACCCTGGCCAATGGGAACCAGAGTGAAGAAGCAGT...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAACGCTCTGGCCTAACATaGATAACGCCAAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQRSGLT*ITPSAG Trigger: CCCTGCGCTTGGCGTTATCCATGTTAGGCCAGAGCG...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR GCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGTTGCATTCTGGTCCTaGAGGAATTCTGACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKVAFWS*RNSDTN Trigger: GTTGGTGTCAGAATTCCTGCAGGACCAGAATGCAAC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATCTGTATAAACTCTGCTaGCCACTGTTCTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNLYKLC*PLFCLS Trigger: GCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAG...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGTCGGCGATGAATTCTTaGGACCAGTCGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKSAMNS*DQSVSL Trigger: TAATGAGACCGACTGGTCCCAAGAATTCATCGCCGA...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAATCTGACGTGCCCTGCTaGTGTATAAACTCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQSDVPC*CINSAA Trigger: GGCAGCAGAGTTTATACAGCAGCAGGGCACGTCAGA...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAACTACTCCCAAAGGCTTaGAAACGGTCTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQLLPKA*KRSLLL Trigger: CAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAG...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGACAAGAGTTGCATTCTaGTCCTGCAGGAATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWEFGKNATSEPGCYKSLTRVAF*SCRNSD Trigger: GTCAGAATTCCTGCAGGACCAGAATGCAACTCTTGT...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGACAAGAGTTGCATTCTaGTCCTGCAGGAATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKTRVAF*SCRNSD Trigger: GTCAGAATTCCTGCAGGACCAGAATGCAACTCTTGT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTTTCAAGAAGGCTTATGGTAACACTGAACCCTCCCTTGGTTGGGAATTCGGCGATGAATTCTTaGGACCAGTCGGTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IKVSRRLMVTLNPPLVGNSAMNS*DQSVSL Trigger: TAATGAGACCGACTGGTCCCAAGAATTCATCGCCGA...ATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCCTTCTTGAAACCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGATCAGACTCTATAGCTaGCTTGGCTCGTTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LNQVATRVCLVPTSKSPKIRLYS*LGSFKF Trigger: GAATTTGAACGAGCCAAGTCAGCTATAGAGTCTGAT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR GCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGACTGTTCAATCTCCTaGATCTCTGCCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQDCSIS*ISARRS Trigger: TGACCTCCTGGCAGAGATGCAGGAGATTGAACAGTC...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAGCTATTTTGTTTCCTaGTCTTGTAAACTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALELPRDRDSSSLQLSRTSYFVS*SCKLIN Trigger: GTTGATCAGTTTACAAGACCAGGAAACAAAATAGCT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| 3UTR CAA 72 bp | AAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTaGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNATSEPGCYKS*FSSYFQVSQEE Trigger: CTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAACAAGAGTTGCATTCTaGTCCTGCAGGAATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQTRVAF*SCRNSD Trigger: GTCAGAATTCCTGCAGGACCAGAATGCAACTCTTGT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAATCAGACTCTATAGCTaGCTTGGCTCGTTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQIRLYS*LGSFKF Trigger: GAATTTGAACGAGCCAAGTCAGCTATAGAGTCTGAT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CCA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAAGCTATTTTGTTTCCTaGTCTTGTAAACTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NATSEPGCYKSLFSSYFQSYFVS*SCKLIN Trigger: GTTGATCAGTTTACAAGACCAGGAAACAAAATAGCT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS GCA 90 bp | GCTGCTGAGGCTCCCGGAGGCCAGGGGCCAGGCCTCAGTCCCTCCTaGCGAAGGGCCTTGTCCTGGGTGAAATGGGTGGCCAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AAEAPGGQGPGLSPS*RRALSWVKWVASFI Trigger: GATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGGCCCCTGGCCTCCGGGAGCCTCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS CCA 90 bp | GGCCAGGGGCCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGCTTCATCAGCGGGTTGGCACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQGPGLSPSCRRALS*VKWVASFISGLAPP Trigger: TGGGGGTGCCAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGGCCCCTGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS TCA 90 bp | GACGTGCCCTGCTGCTGTATAAACTCTGCTGCCCACTGTTCTGCCTaGGCTCCGCCCGACCCTGCAGCCGACTCCAGGGACACCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DVPCCCINSAAHCSA*APPDPAADSRDTCP Trigger: GGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAGCAGGGCACGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
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| CDS CCA 90 bp | CCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGCGGGTTGGCACCCCCACATTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGLSPSCRRALSWVK*VASFISGLAPPHSP Trigger: GGGCGAATGTGGGGGTGCCAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS TCA 90 bp | AGGGGCCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTTGTCCTGGGTaGAATGGGTGGCCAGCTTCATCAGCGGGTTGGCACCCCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: RGQASVPPAEGPCPG*NGWPASSAGWHPHI Trigger: AATGTGGGGGTGCCAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGGCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS GCA 90 bp | TATAAACTCTGCTGCCCACTGTTCTGCCTGAGCTCCGCCCGACCCTaGAGCCGACTCCAGGGACACCTGCCCCTCGCCAATCTGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YKLCCPLFCLSSARP*SRLQGHLPLANLPH Trigger: GTGCGGCAGATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCAGAGTTTATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGATCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPLVGPFEERESHPERGSCRRA*SWVKWV Trigger: CACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGA...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGATACTCCCCGCTCAGGTaGAAGAGGACTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTPLVGPFEERESHPERGYSPLR*KRTPRP Trigger: TGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGTA...TCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGGGGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGTAGGCCCGTTTGAGGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCTACTCCCCGCTCAGGTaGAAGAGGACTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLVGPFEERESHPERGPLYSPLR*KRTPRP Trigger: TGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGTA...GAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCCTCAAACGGGCCTACCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCATCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERESHPERGPLQADTHRASCRRA*SWVKWV Trigger: CACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGA...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAAGAGCAACACAGCATaGGGCAGGTCTCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GEGVTPRARTPPSRHSQGKSNTA*GRSPSS Trigger: GGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCTT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS GCA 90 bp | TATAAACTCTGCTGCCCACTGTTCTGCCTGAGCTCCGCCCGACCCTaGAGCCGACTCCAGGGACACCTGCCCCTCGCCAATCTCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YKLCCPLFCLSSARP*SRLQGHLPLANLRV Trigger: AACTCTGAGATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCAGAGTTTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112530.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCTCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPTLRQLLRGRTACGHQPSCRRA*SWVKWV Trigger: CACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGA...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | CCCCACACAGAAACAGTGGAGACGTCTCCAGCTGCTCCCTCAGAATCCCTTCATGATCCCAAGATGCGCTaGCTGGGGCCTGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PHTETVETSPAAPSESLHDPKMR*LGPAPV Trigger: GACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGATC...ATGAAGGGATTCTGAGGGAGCAGCTGGAGACGTCTCCACTGTTTCTGTGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS CCA 90 bp | GGAATTCTGACACCAACTCGTCTTCAGTTCCTACTCCCAAAGGCTTaGAAACGGTCTCTGCTGCTGAGGCTCCCGGAGGCCAGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GILTPTRLQFLLPKA*KRSLLLRLPEARGQ Trigger: CTGGCCCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAGGAACTGAAGACGAGTTGGTGTCAGAATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | GAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCATTCGGCGATGAATTCTaGGGACCAGTCGGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ERESHPERGPLQADTHRAFGDEF*GPVGLI Trigger: AATGAGACCGACTGGTCCCAAGAATTCATCGCCGAA...TGCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCGACTCTATAGCTGACTaGGCTCGTTCAAATTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GEGVTPRARTPPSRHSQGDSIAD*ARSNST Trigger: GGTGGAATTTGAACGAGCCAAGTCAGCTATAGAGTC...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | ACCCCTACTCTGAGGCAGCTCCTGAGAGGTCGTACCGCTTGTGGTCATCAGCCCCTCGGGATACAAGAGTaGCATTCTGGTCCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPTLRQLLRGRTACGHQPLGIQE*HSGPAG Trigger: TCCTGCAGGACCAGAATGCAACTCTTGTATCCCGAG...GGGCTGATGACCACAAGCGGTACGACCTCTCAGGAGCTGCCTCAGAGTAGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGAGTCACACCCAGAGCGCGGACCCCTCCAAGCAGACACTCACAGGGCAACTCTGCCTGTAACTaGTCCCAGAAATCGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: GEGVTPRARTPPSRHSQGNSACN*SQKSTS Trigger: TGATGTCGATTTCTGGGACAAGTTACAGGCAGAGTT...GCCCTGTGAGTGTCTGCTTGGAGGGGTCCGCGCTCTGGGTGTGACTCCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGTACTCCCCGCTCAGGTaGAAGAGGACTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEYSPLR*KRTPRP Trigger: TGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGTA...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGATCCCAAGATGCGCTaGCTGGGGCCTGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNQVATRVCLVPTSKSPKDPKMR*LGPAPV Trigger: GACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGATC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGATCCCAAGATGCGCTaGCTGGGGCCTGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GWEFGKNATSEPGCYKSLDPKMR*LGPAPV Trigger: GACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGATC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGGATCCCAAGATGCGCTaGCTGGGGCCTGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFSSYFQVSQEERTAVDPKMR*LGPAPV Trigger: GACCGGGGCAGGCCCCAGCAAGCGCATCTTGGGATC...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGTTCGGCGATGAATTCTaGGGACCAGTCGGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LPKEAGLLPIPRKMGQGEFGDEF*GPVGLI Trigger: AATGAGACCGACTGGTCCCAAGAATTCATCGCCGAA...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGTCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNQVATRVCLVPTSKSPKSCRRA*SWVKWV Trigger: CACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGA...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGAACTCTGCCTGTAACTaGTCCCAGAAATCGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPKEAGLLPIPRKMGQGENSACN*SQKSTS Trigger: TGATGTCGATTTCTGGGACAAGTTACAGGCAGAGTT...CTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGTACTCCCCGCTCAGGTaGAAGAGGACTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSLFSSYFQVSQEERTAVYSPLR*KRTPRP Trigger: TGGCCTGGGAGTCCTCTTCAACCTGAGCGGGGAGTA...CACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGCTGGACTGTTACCAATTCCCAGGAAGATGGGGCAAGGAGAGACTTACTTCGGCGATGAATTCTaGGGACCAGTCGGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KEAGLLPIPRKMGQGETYFGDEF*GPVGLI Trigger: AATGAGACCGACTGGTCCCAAGAATTCATCGCCGAA...GTAAGTCTCTCCTTGCCCCATCTTCCTGGGAATTGGTAACAGTCCAGCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCTGCTCCCTCAGAATCCCTTCATCTTCACCTTGTGGAGGTAATCGAGGGAACTCTGCCTGTAACTaGTCCCAGAAATCGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSLRIPSSSPCGGNRGNSACN*SQKSTS Trigger: TGATGTCGATTTCTGGGACAAGTTACAGGCAGAGTT...CCCTCGATTACCTCCACAAGGTGAAGATGAAGGGATTCTGAGGGAGCAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGAAGAGCAACACAGCATaGGGCAGGTCTCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWEFGKNATSEPGCYKSLKSNTA*GRSPSS Trigger: GGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCTT...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGCAACACAGCATaGGGCAGGTCTCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNQVATRVCLVPTSKSPKKSNTA*GRSPSS Trigger: GGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCTT...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCTTCGGCGATGAATTCTaGGGACCAGTCGGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ALELPRDRDSSSLQLSRTFGDEF*GPVGLI Trigger: AATGAGACCGACTGGTCCCAAGAATTCATCGCCGAA...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCGACTCTATAGCTGACTaGGCTCGTTCAAATTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ALELPRDRDSSSLQLSRTDSIAD*ARSNST Trigger: GGTGGAATTTGAACGAGCCAAGTCAGCTATAGAGTC...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTCGGCGATGAATTCTaGGGACCAGTCGGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GWEFGKNATSEPGCYKSLFGDEF*GPVGLI Trigger: AATGAGACCGACTGGTCCCAAGAATTCATCGCCGAA...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGAATTACCAAGGGACAGAGACAGCTCATCCCTACAATTAAGTAGGACCAACTCTGCCTGTAACTaGTCCCAGAAATCGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: ALELPRDRDSSSLQLSRTNSACN*SQKSTS Trigger: TGATGTCGATTTCTGGGACAAGTTACAGGCAGAGTT...GGTCCTACTTAATTGTAGGGATGAGCTGTCTCTGTCCCTTGGTAATTCAAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAAAGAGCAACACAGCATaGGGCAGGTCTCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NATSEPGCYKSLFSSYFQKSNTA*GRSPSS Trigger: GGAGGAGGGAGACCTGCCCAATGCTGTGTTGCTCTT...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGGACTCTATAGCTGACTaGGCTCGTTCAAATTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LNQVATRVCLVPTSKSPKDSIAD*ARSNST Trigger: GGTGGAATTTGAACGAGCCAAGTCAGCTATAGAGTC...CTTGGGAGACTTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGAATTTGGCAAGAATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGGACTCTATAGCTGACTaGGCTCGTTCAAATTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GWEFGKNATSEPGCYKSLDSIAD*ARSNST Trigger: GGTGGAATTTGAACGAGCCAAGTCAGCTATAGAGTC...CAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATTCTTGCCAAATTCCCAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGTTTAGTTCCTACTTCCAAGTCTCCCAAGAAGAGAGGACTGCAGTGCTGAACTCTGCCTGTAACTaGTCCCAGAAATCGACATCA | + |
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Preference number: 5 (lower is better) Translates to: SLFSSYFQVSQEERTAVLNSACN*SQKSTS Trigger: TGATGTCGATTTCTGGGACAAGTTACAGGCAGAGTT...CAGCACTGCAGTCCTCTCTTCTTGGGAGACTTGGAAGTAGGAACTAAACAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS-3UTR CAA 90 bp | AATGCAACTTCTGAACCAGGTTGCTACAAGAGTTTGTTTAGTTCCTACTTCCAAGACTCTATAGCTGACTaGGCTCGTTCAAATTCCACC | + |
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Preference number: 5 (lower is better) Translates to: NATSEPGCYKSLFSSYFQDSIAD*ARSNST Trigger: GGTGGAATTTGAACGAGCCAAGTCAGCTATAGAGTC...TTGGAAGTAGGAACTAAACAAACTCTTGTAGCAACCTGGTTCAGAAGTTGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS CAA 90 bp | CCCGGAGGCCAGGGGCCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTGGCCAGCTTCATCAGCGGGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGGQGPGLSPSCRRA*SWVKWVASFISGLA Trigger: TGCCAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGGCCCCTGGCCTCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS GCA 72 bp | TGCTGCCCACTGTTCTGCCTGAGCTCCGCCCGACCCTaGAGCCGACTCCAGGGACACCTGCCCCTCGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: CCPLFCLSSARP*SRLQGHLPLAN Trigger: ATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
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| CDS GCA 72 bp | GCTCCGCCCGACCCTGCAGCCGACTCCAGGGACACCTaGCCCTCGCCAATCTGCCGCACGAATTTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: APPDPAADSRDT*PSPICRTNFRN Trigger: GTTCCTGAAATTCGTGCGGCAGATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
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| CDS TCA 72 bp | TCCTACTCCCAAAGGCTTGGAAACGGTCTCTGCTGCTaGGGCTCCCGGAGGCCAGGGGCCAGGCCTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SYSQRLGNGLCC*GSRRPGARPQS Trigger: GGACTGAGGCCTGGCCCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS GCA 72 bp | GCTCCGCCCGACCCTGCAGCCGACTCCAGGGACACCTaGCCCTCGCCAATCTCAGAGTTAGCCAATTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: APPDPAADSRDT*PSPISELANLG Trigger: CCCCAAATTGGCTAACTCTGAGATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112530.8 |
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| CDS CAA 72 bp | CAGGGGCCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTaGTCCTGGGTGAAATGGGTGGCCAGCTTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: QGPGLSPSCRRA*SWVKWVASFIS Trigger: GCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGGCCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS CCA 72 bp | AGTCCCTCCTGCCGAAGGGCCTTGTCCTGGGTGAAATaGGTGGCCAGCTTCATCAGCGGGTTGGCACCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSCRRALSWVK*VASFISGLAPP Trigger: TGGGGGTGCCAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS CCA 72 bp | CCAGGCCTCAGTCCCTCCTGCCGAAGGGCCTTGTCCTaGGTGAAATGGGTGGCCAGCTTCATCAGCGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PGLSPSCRRALS*VKWVASFISGL Trigger: CAACCCGCTGATGAAGCTGGCCACCCATTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGAGGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS TCA 72 bp | TGCTGCTGTATAAACTCTGCTGCCCACTGTTCTGCCTaGGCTCCGCCCGACCCTGCAGCCGACTCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CCCINSAAHCSA*APPDPAADSRD Trigger: GTCCCTGGAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035861.6 ENSMUST00000112530.8 ENSMUST00000112532.8 |
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| CDS GCA 72 bp | AGACACCTCCGCAGGGCACTGATAGCCAAGAGCTCTTaGTCATTCTCGGCCTGGGTGGTGCCCAGGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: RHLRRALIAKSS*SFSAWVVPRYC Trigger: GCAGTACCTGGGCACCACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTATCAGTGCCCTGCGGAGGTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS CAA 72 bp | CAGACACCTCCGCAGGGCACTGATAGCCAAGAGCTCTaGCTCATTCTCGGCCTGGGTGGTGCCCAGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: QTPPQGTDSQEL*LILGLGGAQVL Trigger: CAGTACCTGGGCACCACCCAGGCCGAGAATGAGCAAGAGCTCTTGGCTATCAGTGCCCTGCGGAGGTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS CAA 90 bp | AGGAATTCTGACACCAACTCGTCTTCAGTTCCTACTCCCAAAGGCTaGGAAACGGTCTCTGCTGCTGAGGCTCCCGGAGGCCAGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RNSDTNSSSVPTPKG*ETVSAAEAPGGQGP Trigger: TGGCCCCTGGCCTCCGGGAGCCTCAGCAGCAGAGACCGTTTCCAAGCCTTTGGGAGTAGGAACTGAAGACGAGTTGGTGTCAGAATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035861.6 ENSMUST00000080557.12 ENSMUST00000112530.8 ENSMUST00000112531.8 ENSMUST00000112532.8 |
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| CDS GCA 72 bp | GCAGCCGACTCCAGGGACACCTGCCCCTCGCCAATCTaGCGCACGAATTTCAGGAACTCAGAGTTAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: AADSRDTCPSPI*RTNFRNSELAN Trigger: ATTGGCTAACTCTGAGTTCCTGAAATTCGTGCGGCAGATTGGCGAGGGGCAGGTGTCCCTGGAGTCGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035861.6 ENSMUST00000112532.8 |
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