Pregenerated sensors for PEX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019809Ensembl transcript IDs: ENSMUST00000019945.15, ENSMUST00000105539.2, ENSMUST00000105541.8, ENSMUST00000170376.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAACAACAGTAAAGAAAAGTTGACCATAGGGGTTCAAATGCACTaGTTCCTTGGTGATAAGCCCTCTGGCACGTGTGTTCAAGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: RNNSKEKLTIGVQMH*FLGDKPSGTCVQAN Trigger: ATTTGCTTGAACACACGTGCCAGAGGGCTTATCACCAAGGAATCAGTGCATTTGAACCCCTATGGTCAACTTTTCTTTACTGTTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR TCA 90 bp | CTCCTAGATCTACTTTTGAAGACATATCTTCCCTCATTCTATGTGTaGAAGGACACCACATTCCATTCCATATACGTATGGAAGTACCTA | + |
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Preference number: 1 (lower is better) Translates to: LLDLLLKTYLPSFYV*KDTTFHSIYVWKYL Trigger: TAGGTACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAAGATATGTCTTCAAAAGTAGATCTAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGGGGTTCAAATGCACTaGTTCCTTGGTGATAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SIYNLLRVANKALENAANGVQMH*FLGDKP Trigger: GGGCTTATCACCAAGGAATCAGTGCATTTGAACCCC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATTGGCCGGAGAGAATCTaGCTTGCTCTTGCTTACTTC | + |
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Preference number: 2 (lower is better) Translates to: SIYNLLRVANKALENAANWPERI*LALAYF Trigger: GAAGTAAGCAAGAGCAAGCCAGATTCTCTCCGGCCA...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATGGCCGGAGAGAATCTaGCTTGCTCTTGCTTACTTC | + |
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Preference number: 2 (lower is better) Translates to: KSIYNLLRVANKALENAAWPERI*LALAYF Trigger: GAAGTAAGCAAGAGCAAGCCAGATTCTCTCCGGCCA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCACCCTCATTCTATGTGTaGAAGGACACCACATTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSIYNLLRVANKALENAAPSFYV*KDTTFH Trigger: ATGGAATGTGGTGTCCTTTCACACATAGAATGAGGG...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATATGGAAGTACCTAGTTaGTTTGGATCAGCTATCCAG | + |
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Preference number: 2 (lower is better) Translates to: SIYNLLRVANKALENAANMEVPS*FGSAIQ Trigger: CTGGATAGCTGATCCAAACCAACTAGGTACTTCCAT...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR CCA 72 bp | ATCACATGTGCCTTATCAGGGTGGCCGGAGAGAATCTaGCTTGCTCTTGCTTACTTCAGAGTCCAGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: ITCALSGWPERI*LALAYFRVQET Trigger: AGTTTCCTGGACTCTGAAGTAAGCAAGAGCAAGCCAGATTCTCTCCGGCCACCCTGATAAGGCACATGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR GCA 72 bp | CTTATCAGGGTGGCCGGAGAGAATCTGGCTTGCTCTTaGTTACTTCAGAGTCCAGGAAACTTCATAGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: LIRVAGENLACS*LLQSPGNFIVS Trigger: ACTAACTATGAAGTTTCCTGGACTCTGAAGTAAGCAAGAGCAAGCCAGATTCTCTCCGGCCACCCTGATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR TCA 72 bp | AGTAAAGAAAAGTTGACCATAGGGGTTCAAATGCACTaGTTCCTTGGTGATAAGCCCTCTGGCACGTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: SKEKLTIGVQMH*FLGDKPSGTCV Trigger: AACACACGTGCCAGAGGGCTTATCACCAAGGAATCAGTGCATTTGAACCCCTATGGTCAACTTTTCTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAGAATCTGGCTTGCTCTaGCTTACTTCAGAGTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSIYNLLRVANKALENAAESGLL*LTSESR Trigger: CCTGGACTCTGAAGTAAGCAAGAGCAAGCCAGATTC...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR TCA 72 bp | CTACTTTTGAAGACATATCTTCCCTCATTCTATGTGTaGAAGGACACCACATTCCATTCCATATACGTATGG | + |
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Preference number: 3 (lower is better) Translates to: LLLKTYLPSFYV*KDTTFHSIYVW Trigger: CCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAAGATATGTCTTCAAAAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| 3UTR-3UTR CAA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATAACAGTAAAGAAAAGTaGACCATAGGGGTTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: SIYNLLRVANKALENAANNSKEK*TIGVQM Trigger: CATTTGAACCCCTATGGTCAACTTTTCTTTACTGTT...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTCCCATAGGCCTGAGCTaGCAATGGTGTCTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: PHSMCERTPHSIPYTYGSPIGLS*QWCLLI Trigger: GATGAGGAGACACCATTGGCAGCTCAGGCCTATGGG...ACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACCCATAGGCCTGAGCTaGCAATGGTGTCTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVPIGLS*QWCLLI Trigger: GATGAGGAGACACCATTGGCAGCTCAGGCCTATGGG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAGTAGGTCCTGCTCAGTaGGTCGAAAGAATTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGVGPAQ*VERIRP Trigger: TGGCCGAATTCTTTCGACCCACTGAGCAGGACCTAC...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGATGTCTCACTGCAAACTaGATGGATCTGCCCGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGCLTAN*MDLPVH Trigger: GTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACA...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTTCCGAGTTGAGCTGCTaGATTAAGGCCTCTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PHSMCERTPHSIPYTYGSSELSC*IKASLS Trigger: ACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGA...ACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACTCTCCGAGTTGAGCTaGTGCATTAAGGCCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVLSELS*CIKASL Trigger: GAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR TCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTATGTCTAGAAGCCGACTaGAGCCTCTGTTTAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVCLEAD*SLCLDR Trigger: CCTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACA...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCACTCCTCCGAGGACTGTaGCCAGGAAGATGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAALLRGL*PGRCIS Trigger: AGAAATGCATCTTCCTGGGCACAGTCCTCGGAGGAG...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR GCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATCTCTCCGAGTTGAGCTaGTGCATTAAGGCCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANLSELS*CIKASL Trigger: GAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAG...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGACTTGATAAATACTGCTaGTGTACATCCGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGLDKYC*CTSGGA Trigger: TGCTCCTCCGGATGTACAGCAGCAGTATTTATCAAG...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR TCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATTGTCTAGAAGCCGACTaGAGCCTCTGTTTAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANCLEAD*SLCLDR Trigger: CCTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACA...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGATGCAAGTCCTCTGGTTaGTTTCAAAATGGTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGCKSSG*FQNGTV Trigger: GACAGTACCATTTTGAAAGCAACCAGAGGACTTGCA...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACTTGATAAATACTGCTaGTGTACATCCGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVLDKYC*CTSGGA Trigger: TGCTCCTCCGGATGTACAGCAGCAGTATTTATCAAG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATCCATGCTGTAGGTCCTaGTCAGTGGGTCGAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANPCCRS*SVGRKN Trigger: ATTCTTTCGACCCACTGAGCAGGACCTACAGCATGG...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCACCATGCTGTAGGTCCTaGTCAGTGGGTCGAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAPCCRS*SVGRKN Trigger: ATTCTTTCGACCCACTGAGCAGGACCTACAGCATGG...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATACTGTCGCCGAGCTTaGGCAATGTATTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAYCRRA*AMYSAA Trigger: AGCTGCAGAATACATTGCCCAAGCTCGGCGACAGTA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATCAGTGTCGGCAGCATaGACAGCACTGTCATATTGC | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAASVSAA*TALSYC Trigger: GCAATATGACAGTGCTGTCCATGCTGCCGACACTGA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR CCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTAGGCACAGTGAAGACCTaGACACATCTTTATCATTCC | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVGTVKT*THLYHS Trigger: GGAATGATAAAGATGTGTCCAGGTCTTCACTGTGCC...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGATCTCCAAGGAGGTGTTaGATACTTGATAAATACTGC | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGSPRRC*ILDKYC Trigger: GCAGTATTTATCAAGTATTCAACACCTCCTTGGAGA...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACTGTGCCCAGGAAGATaGATTTCTTTTTGTGACGTT | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVLCPGR*ISFCDV Trigger: AACGTCACAAAAAGAAATGCATCTTCCTGGGCACAG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTAACAGCACTGTCATATTaGAAGTCCTCTGGTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVTALSY*KSSGCF Trigger: AAAGCAACCAGAGGACTTGCAATATGACAGTGCTGT...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACCACCAGCATACACGTaGTATATACAGCTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVPPAYT*YIQLQY Trigger: GTATTGTAGCTGTATATAGCACGTGTATGCTGGTGG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACAAACTGAATGGATCTaGCCGTTCACTATGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVQTEWI*PFTMGI Trigger: AATTCCCATAGTGAACGGGCAGATCCATTCAGTTTG...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATGGTTGCTTTCAAAATaGTACTGTCGCCGAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAWLLSK*YCRRAW Trigger: CCAAGCTCGGCGACAGTACCATTTTGAAAGCAACCA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR CCA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGACCAATTATGTTTAACTaGACTCGCAAAAGAACCACC | + |
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Preference number: 4 (lower is better) Translates to: FPHSMCERTPHSIPYTYGPIMFN*TRKRTT Trigger: GGTGGTTCTTTTGCGAGTCCAGTTAAACATAATTGG...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTATGGACAGACTGTTTATaGAGTTACCATGCTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVWTDCL*SYHAVG Trigger: ACCTACAGCATGGTAACTCCATAAACAGTCTGTCCA...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATCATTTCTCCAGTTGTTaGGGGGTACTAAACGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANHFSSC*GVLNAS Trigger: CGAAGCGTTTAGTACCCCCCAACAACTGGAGAAATG...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCACATTTCTCCAGTTGTTaGGGGGTACTAAACGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAHFSSC*GVLNAS Trigger: CGAAGCGTTTAGTACCCCCCAACAACTGGAGAAATG...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR TCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTATCTCCAAGGAGGTGTTaGATACTTGATAAATACTGC | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVSPRRC*ILDKYC Trigger: GCAGTATTTATCAAGTATTCAACACCTCCTTGGAGA...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTAATACTTGATAAATACTaGTGCTGTACATCCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVILDKY*CCTSGG Trigger: TCCTCCGGATGTACAGCAGCAGTATTTATCAAGTAT...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGGCACAGTGAAGACCTaGACACATCTTTATCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANGTVKT*THLYHS Trigger: GGAATGATAAAGATGTGTCCAGGTCTTCACTGTGCC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATTCACTGCAAACTGAATaGATCTGCCCGTTCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANSLQTE*ICPFTM Trigger: CATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGA...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATCACTGCAAACTGAATaGATCTGCCCGTTCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAASLQTE*ICPFTM Trigger: CATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCACCACCAGCATACACGTaGTATATACAGCTACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAPPAYT*YIQLQY Trigger: GTATTGTAGCTGTATATAGCACGTGTATGCTGGTGG...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CCA 90 bp | CTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTAAACTGTACTAAAATCTaGACTTTCCAGCATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LILCVKGHHIPFHIRMEVNCTKI*TFQHVS Trigger: AGAGACATGCTGGAAAGTCCAGATTTTAGTACAGTT...TACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCATGGACAGACTGTTTATaGAGTTACCATGCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSIYNLLRVANKALENAAWTDCL*SYHAVG Trigger: ACCTACAGCATGGTAACTCCATAAACAGTCTGTCCA...TGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR GCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATATACTTGATAAATACTaGTGCTGTACATCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANILDKY*CCTSGG Trigger: TCCTCCGGATGTACAGCAGCAGTATTTATCAAGTAT...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATATATTGCAAGTCCTCTaGTTGCTTTCAAAATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANILQVL*LLSKWY Trigger: GTACCATTTTGAAAGCAACCAGAGGACTTGCAATAT...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
||
| CDS-3UTR CCA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATAACTGTACTAAAATCTaGACTTTCCAGCATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYNLLRVANKALENAANNCTKI*TFQHVS Trigger: AGAGACATGCTGGAAAGTCCAGATTTTAGTACAGTT...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS GCA 90 bp | GGCCTGCTTTTCAACAGAGCTGTGAGACTCTCCGAGTTGAGCTGCTaGATTAAGGCCTCTCTCAGTGTCGGCAGCATGGACAGCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLFNRAVRLSELSC*IKASLSVGSMDSTV Trigger: GACAGTGCTGTCCATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAAAAGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS GCA 90 bp | GAAGGCCTGCTTTTCAACAGAGCTGTGAGACTCTCCGAGTTGAGCTaGTGCATTAAGGCCTCTCTCAGTGTCGGCAGCATGGACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: EGLLFNRAVRLSELS*CIKASLSVGSMDST Trigger: AGTGCTGTCCATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAAAAGCAGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS GCA 90 bp | CTGACACTGGACAGACTGTTTATGGAGTTACCATGCTGTAGGTCCTaGTCAGTGGGTCGAAAGAATTCGGCCATGTTGTCTAGAAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTLDRLFMELPCCRS*SVGRKNSAMLSRSR Trigger: TCGGCTTCTAGACAACATGGCCGAATTCTTTCGACCCACTGAGCAGGACCTACAGCATGGTAACTCCATAAACAGTCTGTCCAGTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS TCA 90 bp | AGCTGCCAATGGTGTCTCCTCATCTGGCATCATGTACTGGCACAGTaGAGACCTGGACACATCTTTATCATTCCAAGAAGACTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCQWCLLIWHHVLAQ*RPGHIFIIPRRLML Trigger: CAACATCAGTCTTCTTGGAATGATAAAGATGTGTCCAGGTCTTCACTGTGCCAGTACATGATGCCAGATGAGGAGACACCATTGGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CCA 90 bp | ATGGACAGCACTGTCATATTGCAAGTCCTCTGGTTGCTTTCAAAATaGTACTGTCGCCGAGCTTGGGCAATGTATTCTGCAGCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MDSTVILQVLWLLSK*YCRRAWAMYSAASL Trigger: AAGAGAAGCTGCAGAATACATTGCCCAAGCTCGGCGACAGTACCATTTTGAAAGCAACCAGAGGACTTGCAATATGACAGTGCTGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAGTGAGACTCTCCGAGTaGAGCTGCTGCATTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPHSMCERTPHSIPYTYGVRLSE*SCCIKA Trigger: GGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCAC...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS TCA 90 bp | TCTAATGCCCTTCTCAATGAAGAACCACAGGTAAGCTGCACAAAATaGCTAGGTGTCTCACTGCAAACTGAATGGATCTGCCCGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SNALLNEEPQVSCTK*LGVSLQTEWICPFT Trigger: AGTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCATTTTGTGCAGCTTACCTGTGGTTCTTCATTGAGAAGGGCATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS-3UTR CAA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGTACTGTCGCCGAGCTaGGGCAATGTATTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIYNLLRVANKALENAANVLSPS*GNVFCS Trigger: GCTGCAGAATACATTGCCCAAGCTCGGCGACAGTAC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
||
| CDS-3UTR CAA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGTGAGACTCTCCGAGTaGAGCTGCTGCATTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SIYNLLRVANKALENAANVRLSE*SCCIKA Trigger: GGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCAC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGATCCCATATTTCCAGCTaGTTTGAAGGCCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPHSMCERTPHSIPYTYGSHISS*FEGLLF Trigger: GAAAAGCAGGCCTTCAAACAAGCTGGAAATATGGGA...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS-3UTR CAA 90 bp | CCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTTCCCATATTTCCAGCTaGTTTGAAGGCCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PHSMCERTPHSIPYTYGSSHISS*FEGLLF Trigger: GAAAAGCAGGCCTTCAAACAAGCTGGAAATATGGGA...ACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CAA 90 bp | CCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTACGGTAGTGCCATTTTaGCCAACTGTTGCATTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PHSMCERTPHSIPYTYGSTVVPF*PTVALS Trigger: GGATAATGCAACAGTTGGCAAAAATGGCACTACCGT...ACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGATTGCAAGTCCTCTGGTaGCTTTCAAAATGGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FPHSMCERTPHSIPYTYGLQVLW*LSKWYC Trigger: ACAGTACCATTTTGAAAGCAACCAGAGGACTTGCAA...TCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR CAA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGACAGCACTGTCATATaGCAAGTCCTCTGGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SIYNLLRVANKALENAANDSTVI*QVLWLL Trigger: AAGCAACCAGAGGACTTGCAATATGACAGTGCTGTC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019945.15 |
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| CDS-3UTR CAA 90 bp | CCTCATTCTATGTGTGAAAGGACACCACATTCCATTCCATATACGTATGGAAGTATGTCTCTTGTCTCATaGAGAAGTTTAATAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHSMCERTPHSIPYTYGSMSLVS*RSLIVV Trigger: CACCACTATTAAACTTCTCAATGAGACAAGAGACAT...ACTTCCATACGTATATGGAATGGAATGTGGTGTCCTTTCACACATAGAATGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS-3UTR CAA 90 bp | TCTATATACAACCTTCTGAGGGTTGCTAACAAAGCTTTAGAAAATGCTGCAAATGATCCTTTGTACAGCTaGTTTAATGACAGTGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SIYNLLRVANKALENAANDPLYS*FNDSDQ Trigger: TTGGTCACTGTCATTAAACAAGCTGTACAAAGGATC...ATTTGCAGCATTTTCTAAAGCTTTGTTAGCAACCCTCAGAAGGTTGTATATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
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| CDS CAA 72 bp | GGCCTGCTTTTCAACAGAGCTGTGAGACTCTCCGAGTaGAGCTGCTGCATTAAGGCCTCTCTCAGTGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLFNRAVRLSE*SCCIKASLSVG Trigger: GCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAAAAGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS GCA 72 bp | TTCAACAGAGCTGTGAGACTCTCCGAGTTGAGCTGCTaGATTAAGGCCTCTCTCAGTGTCGGCAGCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FNRAVRLSELSC*IKASLSVGSMD Trigger: GTCCATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS GCA 72 bp | CTTTTCAACAGAGCTGTGAGACTCTCCGAGTTGAGCTaGTGCATTAAGGCCTCTCTCAGTGTCGGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LFNRAVRLSELS*CIKASLSVGSM Trigger: CATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CCA 72 bp | ATCTCTGTGAGAAAGCCCATAGGCCTGAGCTGCCAATaGTGTCTCCTCATCTGGCATCATGTACTGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVRKPIGLSCQ*CLLIWHHVLAQ Trigger: CTGTGCCAGTACATGATGCCAGATGAGGAGACACCATTGGCAGCTCAGGCCTATGGGCTTTCTCACAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CAA 90 bp | TTGTTTGAAGGCCTGCTTTTCAACAGAGCTGTGAGACTCTCCGAGTaGAGCTGCTGCATTAAGGCCTCTCTCAGTGTCGGCAGCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFEGLLFNRAVRLSE*SCCIKASLSVGSMD Trigger: GTCCATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCACAGCTCTGTTGAAAAGCAGGCCTTCAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CAA 72 bp | AGGTCCTGCTCAGTGGGTCGAAAGAATTCGGCCATGTaGTCTAGAAGCCGACTGAAGCCTCTGTTTAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSVGRKNSAM*SRSRLKPLFRQ Trigger: CTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACAACATGGCCGAATTCTTTCGACCCACTGAGCAGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS GCA 72 bp | AGGCTGACACTGGACAGACTGTTTATGGAGTTACCATaGTGTAGGTCCTGCTCAGTGGGTCGAAAGAATTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLTLDRLFMELP*CRSCSVGRKNS Trigger: CGAATTCTTTCGACCCACTGAGCAGGACCTACAGCATGGTAACTCCATAAACAGTCTGTCCAGTGTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CAA 90 bp | CCATGCTGTAGGTCCTGCTCAGTGGGTCGAAAGAATTCGGCCATGTaGTCTAGAAGCCGACTGAAGCCTCTGTTTAGACAGGTATTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PCCRSCSVGRKNSAM*SRSRLKPLFRQVFK Trigger: TTTGAATACCTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACAACATGGCCGAATTCTTTCGACCCACTGAGCAGGACCTACAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS TCA 72 bp | GTGACCAACTCTGTGAGGCCGTCTCCAAGGAGGTGTTaGATACTTGATAAATACTGCTGCTGTACATCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: VTNSVRPSPRRC*ILDKYCCCTSG Trigger: TCCGGATGTACAGCAGCAGTATTTATCAAGTATTCAACACCTCCTTGGAGACGGCCTCACAGAGTTGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS GCA 72 bp | GACAGACTGTTTATGGAGTTACCATGCTGTAGGTCCTaGTCAGTGGGTCGAAAGAATTCGGCCATGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DRLFMELPCCRS*SVGRKNSAMLS Trigger: AGACAACATGGCCGAATTCTTTCGACCCACTGAGCAGGACCTACAGCATGGTAACTCCATAAACAGTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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| CDS CCA 72 bp | TGTTTATGGAGTTACCATGCTGTAGGTCCTGCTCAGTaGGTCGAAAGAATTCGGCCATGTTGTCTAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLWSYHAVGPAQ*VERIRPCCLEA Trigger: GGCTTCTAGACAACATGGCCGAATTCTTTCGACCCACTGAGCAGGACCTACAGCATGGTAACTCCATAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS TCA 72 bp | TGGTGTCTCCTCATCTGGCATCATGTACTGGCACAGTaGAGACCTGGACACATCTTTATCATTCCAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WCLLIWHHVLAQ*RPGHIFIIPRR Trigger: TCTTCTTGGAATGATAAAGATGTGTCCAGGTCTTCACTGTGCCAGTACATGATGCCAGATGAGGAGACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS CCA 72 bp | ACTGTCATATTGCAAGTCCTCTGGTTGCTTTCAAAATaGTACTGTCGCCGAGCTTGGGCAATGTATTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVILQVLWLLSK*YCRRAWAMYSA Trigger: TGCAGAATACATTGCCCAAGCTCGGCGACAGTACCATTTTGAAAGCAACCAGAGGACTTGCAATATGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
||
| CDS CAA 72 bp | CCTCTGGTTGCTTTCAAAATGGTACTGTCGCCGAGCTaGGGCAATGTATTCTGCAGCTTCTCTTTCTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PLVAFKMVLSPS*GNVFCSFSFLY Trigger: ATACAAGAAAGAGAAGCTGCAGAATACATTGCCCAAGCTCGGCGACAGTACCATTTTGAAAGCAACCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
||
| CDS TCA 72 bp | GTCGAAAGAATTCGGCCATGTTGTCTAGAAGCCGACTaGAGCCTCTGTTTAGACAGGTATTCAAAACTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VERIRPCCLEAD*SLCLDRYSKLY Trigger: GTACAGTTTTGAATACCTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACAACATGGCCGAATTCTTTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS TCA 72 bp | CTTCTCAATGAAGAACCACAGGTAAGCTGCACAAAATaGCTAGGTGTCTCACTGCAAACTGAATGGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLNEEPQVSCTK*LGVSLQTEWIC Trigger: GCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCATTTTGTGCAGCTTACCTGTGGTTCTTCATTGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS CCA 72 bp | CTCTGGTTGCTTTCAAAATGGTACTGTCGCCGAGCTTaGGCAATGTATTCTGCAGCTTCTCTTTCTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LWLLSKWYCRRA*AMYSAASLSCI Trigger: AATACAAGAAAGAGAAGCTGCAGAATACATTGCCCAAGCTCGGCGACAGTACCATTTTGAAAGCAACCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
||
| CDS TCA 72 bp | ATCCTGCACAAAATGACTAGGTGTCTCACTGCAAACTaGATGGATCTGCCCGTTCACTATGGGAATTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILHKMTRCLTAN*MDLPVHYGNYL Trigger: AAGATAATTCCCATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCATTTTGTGCAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 |
||
| CDS TCA 72 bp | AAGCTGCACAAAATGACTAGGTGTCTCACTGCAAACTaGATGGATCTGCCCGTTCACTATGGGAATTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KLHKMTRCLTAN*MDLPVHYGNYL Trigger: AAGATAATTCCCATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCATTTTGTGCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105541.8 ENSMUST00000170376.8 |
||
| CDS GCA 72 bp | GGATATATACTCCTCCGAGGACTGTGCCCAGGAAGATaGATTTCTTTTTGTGACGTTTCAGAAAATTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GYILLRGLCPGR*ISFCDVSENST Trigger: TGTGGAATTTTCTGAAACGTCACAAAAAGAAATGCATCTTCCTGGGCACAGTCCTCGGAGGAGTATATATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
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| CDS GCA 72 bp | CATATTTTCCCAGGATATATACTCCTCCGAGGACTGTaGCCAGGAAGATGCATTTCTTTTTGTGACGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: HIFPGYILLRGL*PGRCISFCDVS Trigger: TGAAACGTCACAAAAAGAAATGCATCTTCCTGGGCACAGTCCTCGGAGGAGTATATATCCTGGGAAAATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019945.15 ENSMUST00000170376.8 |
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| CDS TCA 72 bp | GAAGACCTGGACACATCTTTATCATTCCAAGAAGACTaGTGTTGCTCAACAAGAATTCTGATTTCTTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: EDLDTSLSFQED*CCSTRILISFS Trigger: ACTAAAAGAAATCAGAATTCTTGTTGAGCAACATCAGTCTTCTTGGAATGATAAAGATGTGTCCAGGTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019945.15 ENSMUST00000105539.2 ENSMUST00000105541.8 ENSMUST00000170376.8 |
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