Pregenerated sensors for PEX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040374Ensembl transcript IDs: ENSMUST00000059021.10, ENSMUST00000071280.8, ENSMUST00000164828.8, ENSMUST00000165309.8, ENSMUST00000191916.6, ENSMUST00000195855.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGAGTTCTTCATCCTAGCTGTCCCACAGTCTCCAGAACTCTCTTaGCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCTG | + |
|
Preference number: 1 (lower is better) Translates to: IEFFILAVPQSPELS*LKQLLHFECKTSTL Trigger: CAGAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTGGGACAGCTAGGATGAAGAACTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGCTAATTCCAAGGAACTaGATACAATACACTTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LELSCACKGREWLYSTLLLIPRN*IQYTFL Trigger: GAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| 3UTR-3UTR CCA 90 bp | GAATGTAAGACTTCAACTCTGAAGGGGTCTGACAGGTATAGACTGAACCTCTTGCTAATTCCAAGGAACTaGATACAATACACTTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ECKTSTLKGSDRYRLNLLLIPRN*IQYTFL Trigger: GAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG...CAAGAGGTTCAGTCTATACCTGTCAGACCCCTTCAGAGTTGAAGTCTTACATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAGTCTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGAATCTCCAAAAATAAATaGACAATCATCCCAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HSLQNSLALSSFYILNVRISKNK*TIIPEP Trigger: AGGCTCTGGGATGATTGTGCATTTATTTTTGGAGAT...TCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCTGAAGATCTCCAAAAATAAATaGACAATCATCCCAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSCLKQLLHFECKTSTLKISKNK*TIIPEP Trigger: AGGCTCTGGGATGATTGTGCATTTATTTTTGGAGAT...CTTCAGAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| 3UTR GCA 72 bp | TTCATCCTAGCTGTCCCACAGTCTCCAGAACTCTCTTaGCTTAAGCAGCTTTTACATTTTGAATGTAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FILAVPQSPELS*LKQLLHFECKT Trigger: AGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTGGGACAGCTAGGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCTGAAGTATAGACTGAACCTCTaGAAAATTGGCTTCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSCLKQLLHFECKTSTLKYRLNL*KIGFRE Trigger: TTCCCTGAAGCCAATTTTCAAGAGGTTCAGTCTATA...CTTCAGAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTTGGGACCACACAAGCTaGTCCAGGGCCTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTWDHTS*SRALFS Trigger: ACTGAATAAGGCCCTGGAGCAGCTTGTGTGGTCCCA...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTCCTAGTGTACTGTCATaGCCAGCAGCACCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTPSVLS*PAAPVR Trigger: TCTTACTGGTGCTGCTGGTCATGACAGTACACTAGG...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGCCTAGTGTACTGTCATaGCCAGCAGCACCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLPSVLS*PAAPVR Trigger: TCTTACTGGTGCTGCTGGTCATGACAGTACACTAGG...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTTCACATCCAATAGTGTaGGGCATTGTGGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTSHPIV*GIVGHS Trigger: AGAGTGGCCCACAATGCCTCACACTATTGGATGTGA...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGTCACATCCAATAGTGTaGGGCATTGTGGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLSHPIV*GIVGHS Trigger: AGAGTGGCCCACAATGCCTCACACTATTGGATGTGA...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCTGGGACCACACAAGCTaGTCCAGGGCCTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSWDHTS*SRALFS Trigger: ACTGAATAAGGCCCTGGAGCAGCTTGTGTGGTCCCA...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGTGGGACCACACAAGCTaGTCCAGGGCCTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLWDHTS*SRALFS Trigger: ACTGAATAAGGCCCTGGAGCAGCTTGTGTGGTCCCA...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTTCAAGTGCATCCAACTaGCTTATCCTCAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTSSASN*LILSTL Trigger: CAGAGTGCTGAGGATAAGTCAGTTGGATGCACTTGA...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGCCTAGTGTACTGTCATaGCCAGCAGCACCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLPSVLS*PAAPVR Trigger: TCTTACTGGTGCTGCTGGTCATGACAGTACACTAGG...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTGGGACCACACAAGCTaGTCCAGGGCCTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNWDHTS*SRALFS Trigger: ACTGAATAAGGCCCTGGAGCAGCTTGTGTGGTCCCA...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCCTGACTGCCCCACAGTaGCATTTTTGGAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSLTAPQ*HFWSRW Trigger: CCATCTACTCCAAAAATGCCACTGTGGGGCAGTCAG...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCACCACTTTCCCCCAATaGTGCACACAGCATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSTTFPQ*CTQHTT Trigger: TGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGT...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGTCAAGTGCATCCAACTaGCTTATCCTCAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLSSASN*LILSTL Trigger: CAGAGTGCTGAGGATAAGTCAGTTGGATGCACTTGA...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTTTTTGGAGTAGATGGTaGACCTCCATAGGAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTFWSRW*TSIGKA Trigger: GGCTTTTCCTATGGAGGTTCACCATCTACTCCAAAA...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGTTGCAAAATACGGAATaGATGCCAAGGAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLLQNTE*MPRRRS Trigger: AGAACGCCTCCTTGGCATTCATTCCGTATTTTGCAA...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCACATCCAATAGTGTaGGGCATTGTGGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNSHPIV*GIVGHS Trigger: AGAGTGGCCCACAATGCCTCACACTATTGGATGTGA...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACATGGGACCACACAAGCTaGTCCAGGGCCTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTWDHTS*SRALFS Trigger: ACTGAATAAGGCCCTGGAGCAGCTTGTGTGGTCCCA...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAACTCAGCAAAGCCATaGCAGAGAAGTTCCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTNSAKP*QRSSLF Trigger: GAATAGGGAACTTCTCTGGCATGGCTTTGCTGAGTT...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATCTGACTGCCCCACAGTaGCATTTTTGGAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNLTAPQ*HFWSRW Trigger: CCATCTACTCCAAAAATGCCACTGTGGGGCAGTCAG...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CCA 90 bp | GAATGTAAGACTTCAACTCTGAAGGGGTCTGACAGGTATAGACTGAACCTCTTGCTGACTGCCCCACAGTaGCATTTTTGGAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ECKTSTLKGSDRYRLNLLLTAPQ*HFWSRW Trigger: CCATCTACTCCAAAAATGCCACTGTGGGGCAGTCAG...CAAGAGGTTCAGTCTATACCTGTCAGACCCCTTCAGAGTTGAAGTCTTACATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCTTCATCCTAGCTGTCCCACAGTCTCCAGAACTCTCTTGCCTTAAGCAGCCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EFFILAVPQSPELSCLKQPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...CTGCTTAAGGCAAGAGAGTTCTGGAGACTGTGGGACAGCTAGGATGAAGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGGCATGTTCTGGGGCTTaGAAAATACGGAATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLACSGA*KIRNEC Trigger: GCATTCATTCCGTATTTTGCAAGCCCCAGAACATGC...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACACTGACTGCCCCACAGTaGCATTTTTGGAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTLTAPQ*HFWSRW Trigger: CCATCTACTCCAAAAATGCCACTGTGGGGCAGTCAG...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACATCAAGTGCATCCAACTaGCTTATCCTCAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTSSASN*LILSTL Trigger: CAGAGTGCTGAGGATAAGTCAGTTGGATGCACTTGA...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTTGCAAAATACGGAATaGATGCCAAGGAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNLQNTE*MPRRRS Trigger: AGAACGCCTCCTTGGCATTCATTCCGTATTTTGCAA...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATCCTCAGCACTCTGTTTaGACTCTGCATATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNPQHSV*TLHILF Trigger: GAAGAGAATATGCAGAGTGCAAACAGAGTGCTGAGG...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTGAAAAGCCACAGAAATaGTTTCACTTCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTEKPQK*FHFWLK Trigger: TTTGAGCCAGAAGTGAAAGCATTTCTGTGGCTTTTC...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATGCATGTTCTGGGGCTTaGAAAATACGGAATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNACSGA*KIRNEC Trigger: GCATTCATTCCGTATTTTGCAAGCCCCAGAACATGC...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATAACTCAGCAAAGCCATaGCAGAGAAGTTCCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNNSAKP*QRSSLF Trigger: GAATAGGGAACTTCTCTGGCATGGCTTTGCTGAGTT...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGTGGCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGGCTGGTATATCAGGTTaGGAGAAGAATCATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRVAVQHTPVKSHLQMTLAGISG*EKNHFC Trigger: ACAAAAATGATTCTTCTCTCAACCTGATATACCAGC...CAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGCCACTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTGCTGGTATATCAGGTTaGGAGAAGAATCATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVQHTPVKSHLQMTLRMTAGISG*EKNHFC Trigger: ACAAAAATGATTCTTCTCTCAACCTGATATACCAGC...AGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCCCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGCCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LELSCACKGREWLYSTLLPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCGAAAAGCCACAGAAATaGTTTCACTTCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSEKPQK*FHFWLK Trigger: TTTGAGCCAGAAGTGAAAGCATTTCTGTGGCTTTTC...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAAACTCAGCAAAGCCATaGCAGAGAAGTTCCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTNSAKP*QRSSLF Trigger: GAATAGGGAACTTCTCTGGCATGGCTTTGCTGAGTT...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAAAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLALSSFYILNVRLQKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...TTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR GCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTAAGGGCTGCACACTGTaGACTTCTGTGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVKGCTL*TSVPHF Trigger: GAAGTGTGGCACAGAAGTGCACAGTGTGCAGCCCTT...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLALSSFYILNVRLQLAYHSF*VLLGGW Trigger: CCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGC...GAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATCCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTCCTAGTGTACTGTCATaGCCAGCAGCACCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVPSVLS*PAAPVR Trigger: TCTTACTGGTGCTGCTGGTCATGACAGTACACTAGG...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | CAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCCCTAGTGTACTGTCATaGCCAGCAGCACCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLALSSFYILNVRLQLPSVLS*PAAPVR Trigger: TCTTACTGGTGCTGCTGGTCATGACAGTACACTAGG...GAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAATCACATCCAATAGTGTaGGGCATTGTGGGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLALSSFYILNVRLQSHPIV*GIVGHS Trigger: AGAGTGGCCCACAATGCCTCACACTATTGGATGTGA...TTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATACTCTGTTTGCACTCTaGATATTCTCTTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNTLFAL*IFSSLP Trigger: TGGCAAAGAAGAGAATATGCAGAGTGCAAACAGAGT...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CACAGTCTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGAACTTTCCCCCAATGGTaGACACAGCATACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLQNSLALSSFYILNVRTFPQW*TQHTTV Trigger: AACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGT...TCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTTCAAGTGCATCCAACTaGCTTATCCTCAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVSSASN*LILSTL Trigger: CAGAGTGCTGAGGATAAGTCAGTTGGATGCACTTGA...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | GTACAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATGCTGGTATATCAGGTTaGGAGAAGAATCATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQHTPVKSHLQMTLRMTNAGISG*EKNHFC Trigger: ACAAAAATGATTCTTCTCTCAACCTGATATACCAGC...ATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACACCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAACTCTGTTTGCACTCTaGATATTCTCTTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTTLFAL*IFSSLP Trigger: TGGCAAAGAAGAGAATATGCAGAGTGCAAACAGAGT...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAGAAAAGCCACAGAAATaGTTTCACTTCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSHLQMTLRMTNSKELDTEKPQK*FHFWLK Trigger: TTTGAGCCAGAAGTGAAAGCATTTCTGTGGCTTTTC...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CACAGTCTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGAGCATGTTCTGGGGCTTaGAAAATACGGAATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLQNSLALSSFYILNVRACSGA*KIRNEC Trigger: GCATTCATTCCGTATTTTGCAAGCCCCAGAACATGC...TCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTTTGCAAAATACGGAATaGATGCCAAGGAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVLQNTE*MPRRRS Trigger: AGAACGCCTCCTTGGCATTCATTCCGTATTTTGCAA...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAAAACTCAGCAAAGCCATaGCAGAGAAGTTCCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLALSSFYILNVRLQNSAKP*QRSSLF Trigger: GAATAGGGAACTTCTCTGGCATGGCTTTGCTGAGTT...TTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTCTCCAGAACTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGAGCTGGTATATCAGGTTaGGAGAAGAATCATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLQNSLALSSFYILNVRAGISG*EKNHFC Trigger: ACAAAAATGATTCTTCTCTCAACCTGATATACCAGC...TCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAGTTCTGGAGACTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTCCAAAAGACGCTAAATaGCGGTTTCGAAACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVPKDAK*RFRNKS Trigger: TGATTTGTTTCGAAACCGTCATTTAGCGTCTTTTGG...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCTGAAGACTCTGTTTGCACTCTaGATATTCTCTTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSCLKQLLHFECKTSTLKTLFAL*IFSSLP Trigger: TGGCAAAGAAGAGAATATGCAGAGTGCAAACAGAGT...CTTCAGAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR GCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTACTCTGTTTGCACTCTaGATATTCTCTTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVTLFAL*IFSSLP Trigger: TGGCAAAGAAGAGAATATGCAGAGTGCAAACAGAGT...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTGAAAAGCCACAGAAATaGTTTCACTTCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVEKPQK*FHFWLK Trigger: TTTGAGCCAGAAGTGAAAGCATTTCTGTGGCTTTTC...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTTGCCTTAAGCAGCTTTTACATTTTGAATGTAAGACTTCAACTCTGAAGGAAAAGCCACAGAAATaGTTTCACTTCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCLKQLLHFECKTSTLKEKPQK*FHFWLK Trigger: TTTGAGCCAGAAGTGAAAGCATTTCTGTGGCTTTTC...CTTCAGAGTTGAAGTCTTACATTCAAAATGTAAAAGCTGCTTAAGGCAAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164828.8 ENSMUST00000165309.8 |
||
| CDS-3UTR TCA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTGCTGGTATATCAGGTTaGGAGAAGAATCATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVAGISG*EKNHFC Trigger: ACAAAAATGATTCTTCTCTCAACCTGATATACCAGC...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS TCA 90 bp | TCAAAGCCAACTTCGCGCATGTTCTGGGGCTTGCAAAATACGGAATaGATGCCAAGGAGGCGTTCTGTCAAAGTTGCAAACTTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKPTSRMFWGLQNTE*MPRRRSVKVANFPF Trigger: AAAGGGAAAGTTTGCAACTTTGACAGAACGCCTCCTTGGCATTCATTCCGTATTTTGCAAGCCCCAGAACATGCGCGAAGTTGGCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS TCA 90 bp | TCTAACCACTTTCCCCCAATGGTGCACACAGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGGTATATCAGGTTGAGAGAAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SNHFPPMVHTAYHSF*VLLGGWYIRLREES Trigger: TGATTCTTCTCTCAACCTGATATACCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS GCA 90 bp | GAAACAAATCATAACATCGTTCTTCTAACCACTTTCCCCCAATGGTaGACACAGCATACCACAGTTTCTGAGTTTTACTCGGTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ETNHNIVLLTTFPQW*TQHTTVSEFYSVAG Trigger: ACCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGTTAGAAGAACGATGTTATGATTTGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CAA 90 bp | TTAGAACTGAGTTGTGCTTGTAAAGGAAGAGAGTGGCTGTACAGCACACTCCTGGGCGTTCTGTCAAAGTaGCAAACTTTCCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LELSCACKGREWLYSTLLGVLSK*QTFPFV Trigger: TACAAAAGGGAAAGTTTGCAACTTTGACAGAACGCC...CAGGAGTGTGCTGTACAGCCACTCTCTTCCTTTACAAGCACAACTCAGTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CAA 90 bp | CAGCACACTCCTGTTAAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCGGCGTTCTGTCAAAGTaGCAAACTTTCCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QHTPVKSHLQMTLRMTNSGVLSK*QTFPFV Trigger: TACAAAAGGGAAAGTTTGCAACTTTGACAGAACGCC...GGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS CCA 90 bp | TTCGAAACAAATCATAACATCGTTCTTCTAACCACTTTCCCCCAATaGTGCACACAGCATACCACAGTTTCTGAGTTTTACTCGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FETNHNIVLLTTFPQ*CTQHTTVSEFYSVA Trigger: AGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGTTAGAAGAACGATGTTATGATTTGTTTCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS CCA 90 bp | CCCAATGGTGCACACAGCATACCACAGTTTCTGAGTTTTACTCGGTaGCTGGTATATCAGGTTGAGAGAAGAATCATTTTTGTACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PNGAHSIPQFLSFTR*LVYQVERRIIFVLN Trigger: ATTCAGTACAAAAATGATTCTTCTCTCAACCTGATATACCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCACCTACAGATGACACTGAGGATGACTAATTCCAAGGAACTGGATACAGGCGTTCTGTCAAAGTaGCAAACTTTCCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSHLQMTLRMTNSKELDTGVLSK*QTFPFV Trigger: TACAAAAGGGAAAGTTTGCAACTTTGACAGAACGCC...TGTATCCAGTTCCTTGGAATTAGTCATCCTCAGTGTCATCTGTAGGTGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS-3UTR CAA 90 bp | CTAATTCCAAGGAACTGGATACAATACACTTTTCTCAGAGGAAACAACTTGGTTGGCGTTCTGTCAAAGTaGCAAACTTTCCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LIPRNWIQYTFLRGNNLVGVLSK*QTFPFV Trigger: TACAAAAGGGAAAGTTTGCAACTTTGACAGAACGCC...AACCAAGTTGTTTCCTCTGAGAAAAGTGTATTGTATCCAGTTCCTTGGAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS TCA 72 bp | TTTCCCCCAATGGTGCACACAGCATACCACAGTTTCTaGGTTTTACTCGGTGGCTGGTATATCAGGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FPPMVHTAYHSF*VLLGGWYIRLR Trigger: TCTCAACCTGATATACCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS GCA 72 bp | CATAACATCGTTCTTCTAACCACTTTCCCCCAATGGTaGACACAGCATACCACAGTTTCTGAGTTTTACTCG | + |
|
Preference number: 6 (lower is better) Translates to: HNIVLLTTFPQW*TQHTTVSEFYS Trigger: CGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGTTAGAAGAACGATGTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS CCA 72 bp | GCACACAGCATACCACAGTTTCTGAGTTTTACTCGGTaGCTGGTATATCAGGTTGAGAGAAGAATCATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AHSIPQFLSFTR*LVYQVERRIIF Trigger: AAAAATGATTCTTCTCTCAACCTGATATACCAGCCACCGAGTAAAACTCAGAAACTGTGGTATGCTGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||
| CDS CCA 72 bp | AATCATAACATCGTTCTTCTAACCACTTTCCCCCAATaGTGCACACAGCATACCACAGTTTCTGAGTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: NHNIVLLTTFPQ*CTQHTTVSEFY Trigger: GTAAAACTCAGAAACTGTGGTATGCTGTGTGCACCATTGGGGGAAAGTGGTTAGAAGAACGATGTTATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059021.10 ENSMUST00000071280.8 ENSMUST00000164828.8 ENSMUST00000165309.8 ENSMUST00000191916.6 ENSMUST00000195855.6 |
||