Pregenerated sensors for PEX14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028975Ensembl transcript IDs: ENSMUST00000103217.11, ENSMUST00000134747.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTaGCCACCTGCCTCTGATGTCCCGGGGCACTGGGAAGGCGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PTWASAQSWRQSRSP*PPASDVPGHWEGGQ Trigger: CTGCCCGCCTTCCCAGTGCCCCGGGACATCAGAGGCAGGTGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | GCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTaGAGGCAGAGCCGCAGCCCTTGCCCACCTGCCTCTGATGTCCCG | + |
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Preference number: 1 (lower is better) Translates to: ALKGSPTPTWASAQS*RQSRSPCPPASDVP Trigger: CGGGACATCAGAGGCAGGTGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | AATGCAGCCCACACTGCTGCGCTGAAGGGCAGCCCCACCCCTACCTaGGCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NAAHTAALKGSPTPT*ASAQSWRQSRSPCP Trigger: TGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCAGCAGTGTGGGCTGCATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | CTGGCTTGTGGACAGCCAGAGCCGCTGGGGCTGGCTGGGGCTGGCTaGGGCTGGGCCGTGTTTGGGAGGCTGGTGAACAGAAATGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LACGQPEPLGLAGAG*GWAVFGRLVNRNAA Trigger: GGCTGCATTTCTGTTCACCAGCCTCCCAAACACGGCCCAGCCCCAGCCAGCCCCAGCCAGCCCCAGCGGCTCTGGCTGTCCACAAGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 90 bp | GGCCGTGTTTGGGAGGCTGGTGAACAGAAATGCAGCCCACACTGCTaGGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: GRVWEAGEQKCSPHC*AEGQPHPYLGFRPV Trigger: GACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCAGCAGTGTGGGCTGCATTTCTGTTCACCAGCCTCCCAAACACGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 90 bp | ACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTaGAGAGCTCCTGAGTTCTCTGCCTGGCTTGTGGACAGCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TRHLSGRGRGSRGVE*RAPEFSAWLVDSQS Trigger: GCTCTGGCTGTCCACAAGCCAGGCAGAGAACTCAGGAGCTCTGCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | GTGGGAAGGTCAGACATGGCTGTTGGTCAGGAAGGCCCTGCTGCCTaGCTCCACCAGGAGGGAGAAGCACGCCTCACCACCGAGGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: VGRSDMAVGQEGPAA*LHQEGEARLTTEEL Trigger: TAGCTCCTCGGTGGTGAGGCGTGCTTCTCCCTCCTGGTGGAGCCAGGCAGCAGGGCCTTCCTGACCAACAGCCATGTCTGACCTTCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | ACAGGTGCCCAAGAGCAGCATCTGTCAGCCAGGACTTTGGAAGGCTaGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCCAGGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TGAQEQHLSARTLEG*VLGGPQDEEQAQGP Trigger: AGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGCTGACAGATGCTGCTCTTGGGCACCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | CTAGGAGGCCCGCAAGATGAAGAGCAGGCCCAGGGCCCTGGCTTTTaGAACAGGCAAAGAAGAAGCCACAAGCCAGGCCAGGGCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: LGGPQDEEQAQGPGF*NRQRRSHKPGQGTV Trigger: CACTGTGCCCTGGCCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR TCA 90 bp | GTCAGCCAGGACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATaGAGAGCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: VSQDFGRLGPRRPAR*RAGPGPWLLEQAKK Trigger: CTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 90 bp | GAGGTGACAGAGGCAGGAGATGACATGAGCTCTGGCCATGCATGGTaGCAGGTGGTCAAGATACTCGGAGGATACACCTTGACAAGACAC | + |
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Preference number: 1 (lower is better) Translates to: EVTEAGDDMSSGHAW*QVVKILGGYTLTRH Trigger: GTGTCTTGTCAAGGTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATGTCATCTCCTGCCTCTGTCACCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 90 bp | ACTGAGGTGACAGAGGCAGGAGATGACATGAGCTCTGGCCATGCATaGTGCCAGGTGGTCAAGATACTCGGAGGATACACCTTGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: TEVTEAGDDMSSGHA*CQVVKILGGYTLTR Trigger: TCTTGTCAAGGTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATGTCATCTCCTGCCTCTGTCACCTCAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR CCA 90 bp | TGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGATGTCCCGGGGCACTaGGAAGGCGGGCAGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: CAEGQPHPYLGFRPVVEADVPGH*EGGQPS Trigger: ACTTGGCTGCCCGCCTTCCCAGTGCCCCGGGACATC...TGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATACACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCCCCACACTGCTGCGCTaGAGGGCAGCCCCACCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GGYTLTRHLSGRGRGSRGPTLLR*RAAPPL Trigger: TAGGGGTGGGGCTGCCCTTCAGCGCAGCAGTGTGGG...GCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGTGTATCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCTGGGGCTGGGCCGTGTTTGGGAGGCTGGTGAACAGAAATGCAGCCCACGCTTCCGCCCAGTCGTaGAGGCAGAGCCGCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: AGWGWAVFGRLVNRNAAHASAQS*RQSRSP Trigger: AGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGC...GTGGGCTGCATTTCTGTTCACCAGCCTCCCAAACACGGCCCAGCCCCAGCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTGCAGCCCCACCCCTACCTaGGCTTCCGCCCAGTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: TLTRHLSGRGRGSRGVECSPTPT*ASAQSW Trigger: CCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCT...GCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR CCA 90 bp | GACACAGCAAGCGAGACGTCTTGTGTGATACAGAGGACAGCAGGGCAGGTGGGGGACAGCCAGAGCCGCTaGGGCTGGCTGGGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DTASETSCVIQRTAGQVGDSQSR*GWLGLA Trigger: AGCCAGCCCCAGCCAGCCCCAGCGGCTCTGGCTGTC...CCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CAA 90 bp | GGGGTGGGGACAGGTGCCCAAGAGCAGCATCTGTCAGCCAGGACTTaGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GVGTGAQEQHLSART*EGWVLGGPQDEEQA Trigger: GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGCTGACAGATGCTGCTCTTGGGCACCTGTCCCCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGTTGCCCACCTGCCTCTaGTGTCCCGGGGCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: AGPGPWLLEQAKKKPQARLPTCL*CPGALG Trigger: TCCCAGTGCCCCGGGACATCAGAGGCAGGTGGGCAA...CCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCAGAGCCGCAGCCCTTaGCCACCTGCCTCTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: AGPGPWLLEQAKKKPQARQSRSP*PPASDV Trigger: GACATCAGAGGCAGGTGGGCAAGGGCTGCGGCTCTG...CCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR CCA 90 bp | CATGAGCTCTGGCCATGCATGGTGCCAGGTGGTCAAGATACTCGGAGGATACACCTGGCTGGGGCTGGCTaGGGCTGGGCCGTGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HELWPCMVPGGQDTRRIHLAGAG*GWAVFG Trigger: CCCAAACACGGCCCAGCCCCAGCCAGCCCCAGCCAG...GTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTGCGCTGGTGAACAGAAATaGAGCCCACACTGCTGCGCT | + |
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Preference number: 2 (lower is better) Translates to: TLTRHLSGRGRGSRGVECAGEQK*SPHCCA Trigger: AGCGCAGCAGTGTGGGCTGCATTTCTGTTCACCAGC...GCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CAA 90 bp | CCTCACCACCGAGGAGCTAAACCACGACACAGCAAGCGAGACGTCTaGTGTGATACAGAGGACAGCAGGGCAGGTGGGGTGGGGACAGGT | + |
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Preference number: 2 (lower is better) Translates to: PHHRGAKPRHSKRDV*CDTEDSRAGGVGTG Trigger: ACCTGTCCCCACCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTCGTGGTTTAGCTCCTCGGTGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCTCCACCAGGAGGGAGAAGCACGCCTCACCACCGAGGAGCTAAACCACATAGTTTCCCTGCACTaGGGTGACAGAGGCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: AWLHQEGEARLTTEELNHIVSLH*GDRGRR Trigger: TCTCCTGCCTCTGTCACCTCAGTGCAGGGAAACTAT...GTGGTTTAGCTCCTCGGTGGTGAGGCGTGCTTCTCCCTCCTGGTGGAGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCAGTGGGAAGGTCAGACATGGCTGTTGGTCAGGAAGGCCCTGCTGCCTGTTCCCTGCACTGAGGTaGCAGAGGCAGGAGATGACA | + |
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Preference number: 2 (lower is better) Translates to: FLSGKVRHGCWSGRPCCLFPALR*QRQEMT Trigger: TGTCATCTCCTGCCTCTGTCACCTCAGTGCAGGGAA...CAGGCAGCAGGGCCTTCCTGACCAACAGCCATGTCTGACCTTCCCACTGAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR-3UTR GCA 90 bp | GACACAGCAAGCGAGACGTCTTGTGTGATACAGAGGACAGCAGGGCAGGTGGGGTCTGGCCATGCATGGTaGCAGGTGGTCAAGATACTC | + |
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Preference number: 2 (lower is better) Translates to: DTASETSCVIQRTAGQVGSGHAW*QVVKIL Trigger: GAGTATCTTGACCACCTGGCACCATGCATGGCCAGA...CCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | GGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTaGAGGCAGAGCCGCAGCCCTTGCCCACCTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GSPTPTWASAQS*RQSRSPCPPAS Trigger: AGAGGCAGGTGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | CCTGGCTTGTGGACAGCCAGAGCCGCTGGGGCTGGCTaGGGCTGGCTGGGGCTGGGCCGTGTTTGGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PGLWTARAAGAG*GWLGLGRVWEA Trigger: AGCCTCCCAAACACGGCCCAGCCCCAGCCAGCCCCAGCCAGCCCCAGCGGCTCTGGCTGTCCACAAGCCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | GGACAGCCAGAGCCGCTGGGGCTGGCTGGGGCTGGCTaGGGCTGGGCCGTGTTTGGGAGGCTGGTGAACAGA | + |
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Preference number: 3 (lower is better) Translates to: GQPEPLGLAGAG*GWAVFGRLVNR Trigger: TCTGTTCACCAGCCTCCCAAACACGGCCCAGCCCCAGCCAGCCCCAGCCAGCCCCAGCGGCTCTGGCTGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | GAGTTCTCTGCCTGGCTTGTGGACAGCCAGAGCCGCTaGGGCTGGCTGGGGCTGGCTGGGGCTGGGCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: EFSAWLVDSQSR*GWLGLAGAGPC Trigger: ACACGGCCCAGCCCCAGCCAGCCCCAGCCAGCCCCAGCGGCTCTGGCTGTCCACAAGCCAGGCAGAGAACTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 72 bp | GCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTaGCCACCTGCCTCTGATGTCCCGGGGCACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: ASAQSWRQSRSP*PPASDVPGHWE Trigger: TTCCCAGTGCCCCGGGACATCAGAGGCAGGTGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 72 bp | GGGCTGGGCCGTGTTTGGGAGGCTGGTGAACAGAAATaGAGCCCACACTGCTGCGCTGAAGGGCAGCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: GLGRVWEAGEQK*SPHCCAEGQPH Trigger: GTGGGGCTGCCCTTCAGCGCAGCAGTGTGGGCTGCATTTCTGTTCACCAGCCTCCCAAACACGGCCCAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 72 bp | CTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTaGAGAGCTCCTGAGTTCTCTGCCTGGCTTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LSGRGRGSRGVE*RAPEFSAWLVD Trigger: GTCCACAAGCCAGGCAGAGAACTCAGGAGCTCTGCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR TCA 72 bp | GACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATaGAGAGCAGGCCCAGGGCCCTGGCTTTTGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DFGRLGPRRPAR*RAGPGPWLLEQ Trigger: CTGTTCCAAAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | CAAGAGCAGCATCTGTCAGCCAGGACTTTGGAAGGCTaGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QEQHLSARTLEG*VLGGPQDEEQA Trigger: GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGCTGACAGATGCTGCTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR GCA 72 bp | GAGGCAGGAGATGACATGAGCTCTGGCCATGCATGGTaGCAGGTGGTCAAGATACTCGGAGGATACACCTTG | + |
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Preference number: 3 (lower is better) Translates to: EAGDDMSSGHAW*QVVKILGGYTL Trigger: CAAGGTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATGTCATCTCCTGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| 3UTR CCA 72 bp | ACAGAGGCAGGAGATGACATGAGCTCTGGCCATGCATaGTGCCAGGTGGTCAAGATACTCGGAGGATACACC | + |
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Preference number: 3 (lower is better) Translates to: TEAGDDMSSGHA*CQVVKILGGYT Trigger: GGTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATGTCATCTCCTGCCTCTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | AGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTGGGGACCCAGCAGGTaGTATGTGGCCGTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPTPTWASAQSWRQSRSPWGPSR*YVAVEP Trigger: GGGCTCCACGGCCACATACCACCTGCTGGGTCCCCA...AGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | ACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTGCCCACTCGGCCTCCCAGGATaGGGGGCAGCAGGTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPTWASAQSWRQSRSPCPLGLPG*GAAGTS Trigger: AGAGGTACCTGCTGCCCCTCATCCTGGGAGGCCGAG...TGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | TGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCATGCTGCTGTGGTGGTTaGCAGCCGCAGGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CAEGQPHPYLGFRPVVEACCCGG*QPQGWR Trigger: CCTCCAGCCCTGCGGCTGTCAACCACCACAGCAGCA...TGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR GCA 90 bp | ACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGAGCCGCAGCCCTTGCCCACTGGTTCGGCTGCTCTaGCTGCTCCGACGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPTWASAQSWRQSRSPCPLVRLL*LLRRRH Trigger: ATGGCGTCGTCGGAGCAGGCAGAGCAGCCGAACCAG...TGGGCAAGGGCTGCGGCTCTGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR GCA 90 bp | TGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAGCTCGTCGGCAGCTGTaGCCGACTGCTGGAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CAEGQPHPYLGFRPVVEAARRQL*PTAGKP Trigger: TGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGAGC...TGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | GCCAGGACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCAGCTGGGCCCAGGGGTaGAGGCTCGTCGGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ARTLEGWVLGGPQDEEQASWAQG*RLVGSC Trigger: ACAGCTGCCGACGAGCCTTCACCCCTGGGCCCAGCT...GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTCCACCAGGAGGGAGAAGCACGCCTCACCACCGAGGAGCTAAACCACGAGCCCTCCGGGCTGTaGCTGTCCTTCCCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AWLHQEGEARLTTEELNHEPSGL*LSFPGE Trigger: CTCTCCTGGGAAGGACAGCCACAGCCCGGAGGGCTC...GTGGTTTAGCTCCTCGGTGGTGAGGCGTGCTTCTCCCTCCTGGTGGAGCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | GGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCCAGGGCCCTGGCTTTAGTGTTGTCTGCACCTaGGTCACTGTCTGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: GWVLGGPQDEEQAQGPGFSVVCT*VTVWAT Trigger: CGTGGCCCAGACAGTGACTCAGGTGCAGACAACACT...AAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | GGAGGATACACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCTCTCTACCTGCTCATTaGTCTGCCCATCGCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GGYTLTRHLSGRGRGSRGSLPAH*SAHRRP Trigger: GGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGA...GCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGTGTATCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | GCCAGGACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCGCCTCTGGGGCTGTATaGCTGCGGAGTGAGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARTLEGWVLGGPQDEEQAASGAV*LRSEVR Trigger: CCTCACCTCACTCCGCAGCCATACAGCCCCAGAGGC...GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR TCA 90 bp | GGGACAGGTGCCCAAGAGCAGCATCTGTCAGCCAGGACTTTGGAAGGCTGGGTCGCAGTGGCCAGCTCGTaGGCTAGCTCCTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGAQEQHLSARTLEGWVAVASS*ASSWTF Trigger: GAAGGTCCAGGAGCTAGCTCACGAGCTGGCCACTGC...GACCCAGCCTTCCAAAGTCCTGGCTGACAGATGCTGCTCTTGGGCACCTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCCAGGGCCCTGGCTTTGCTGTGCCCGACTGCTaGAAAGCCAGGTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWVLGGPQDEEQAQGPGFAVPDC*KARSIS Trigger: AGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGC...AAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GGAGGATACACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCATGTCACTGCTGCTGTaGTGGTTGACAGCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGYTLTRHLSGRGRGSRGMSLLL*WLTAAG Trigger: CCCTGCGGCTGTCAACCACCACAGCAGCAGTGACAT...GCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGTGTATCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCCAGGGCACAGTGGGGTGGTATGTGGCCGTaGAGCCCTCCGGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFGTGKEEATSQARAQWGGMWP*SPPGCG Trigger: GCCACAGCCCGGAGGGCTCCACGGCCACATACCACC...CCACTGTGCCCTGGCCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | CCACACTGCTGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGCCAAATGCAATTCCTaGCATGATGATAGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHCCAEGQPHPYLGFRPVAKCNS*HDDSQG Trigger: GCCTTGGCTATCATCATGGCAGGAATTGCATTTGGC...GACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCAGCAGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCTGTCTGGGCCACGGTaGCACTCAGTTCCGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGPGPWLLEQAKKKPQARLSGPR*HSVPRD Trigger: GTCTCTCGGAACTGAGTGGCACCGTGGCCCAGACAG...CCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | TGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCACACATTTTCACTTCCTaGAGGAGAGCTTGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAEGQPHPYLGFRPVVEAHIFTS*RRAWLV Trigger: AACCAGCCAAGCTCTCCTCCAGGAAGTGAAAATGTG...TGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAGCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACCTGGACAGGAACCACTaGGGTAGCTGGGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEEQAQGPGFWNRQRRSHLDRNH*GSWAQG Trigger: CCCCTGGGCCCAGCTACCCCAGTGGTTCCTGTCCAG...GTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGCTCTTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | TCGGCAGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCTGGTTCGGCTGCTCTaGCTGCTCCGACGACGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAAVPDCWKARSISSSVSLVRLL*LLRRRH Trigger: ATGGCGTCGTCGGAGCAGGCAGAGCAGCCGAACCAG...ACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCCAGGGCACAGTGGCTTGGCTGGTTCGGCTaGTCTGCCTGCTCCGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAFGTGKEEATSQARAQWLGWFG*SACSDD Trigger: GTCGTCGGAGCAGGCAGAGCAGCCGAACCAGCCAAG...CCACTGTGCCCTGGCCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGGTCGCAAGTGGGCTCTaGCGGACCCGAGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPGPWLLEQAKKKPQARVASGL*RTREFC Trigger: ACAGAATTCTCGGGTCCGGCAGAGCCCACTTGCGAC...CCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCTCCACCAGGAGGGAGAAGCACGCCTCACCACCGAGGAGCTAAACCACTGGACCTTCTGCTGCTaGTGTCTCAGTAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWLHQEGEARLTTEELNHWTFCC*CLSSSW Trigger: CCAAGAGCTACTGAGACAGCAGCAGCAGAAGGTCCA...GTGGTTTAGCTCCTCGGTGGTGAGGCGTGCTTCTCCCTCCTGGTGGAGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGGACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCGGAACTTCACTGCTGTaGCAATCAGTGGCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTLEGWVLGGPQDEEQAGTSLL*QSVALG Trigger: CCCGAGAGCCACTGATTGCCACAGCAGTGAAGTTCC...GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCCAGGGCCCTGGCTTTTGTCTCAGTAGCTCTTaGACAGAGGCCAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWVLGGPQDEEQAQGPGFCLSSS*TEASVV Trigger: GACAACACTGGCCTCTGTCCAAGAGCTACTGAGACA...AAAGCCAGGGCCCTGGGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR TCA 90 bp | GGCGTTGAGTGCAGAGCTCCTGAGTTCTCTGCCTGGCTTGTGGACAGCCAGAGCCTTCCCAGGAGAGGATaGCGTAGACTCGTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVECRAPEFSAWLVDSQSLPRRG*RRLVAD Trigger: GTCAGCAACGAGTCTACGTCATCCTCTCCTGGGAAG...GCTCTGGCTGTCCACAAGCCAGGCAGAGAACTCAGGAGCTCTGCACTCAACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | CCACCTGCCTCTGATGTCCCGGGGCACTGGGAAGGCGGGCAGCCAAGTGCCAGCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPASDVPGHWEGGQPSASFLLKK*SPGRKW Trigger: CCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAA...GCTGGCACTTGGCTGCCCGCCTTCCCAGTGCCCCGGGACATCAGAGGCAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAGCAGGCCCAGGGCCCTGGCTTTTGGAACAGGCAAAGAAGAAGCCACTGGTGGCCTTGGCAGTaGCCAGCTCGTGAGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEEQAQGPGFWNRQRRSHWWPWQ*PARELA Trigger: AGCTAGCTCACGAGCTGGCCACTGCCAAGGCCACCA...GTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAGGGCCCTGGGCCTGCTCTTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR TCA 90 bp | GACACAGCAAGCGAGACGTCTTGTGTGATACAGAGGACAGCAGGGCAGGTGGGGCAGGATCCAGTTGGTTaGTGTGGTGGCCTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTASETSCVIQRTAGQVGQDPVG*CGGLGS Trigger: ACTGCCAAGGCCACCACATCAACCAACTGGATCCTG...CCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTGTATCTTGGCTGGTTCGGCTaGTCTGCCTGCTCCGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCPTAGKPGQSLRLSVLYLGWFG*SACSDD Trigger: GTCGTCGGAGCAGGCAGAGCAGCCGAACCAGCCAAG...ATACAGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR GCA 90 bp | GACACAGCAAGCGAGACGTCTTGTGTGATACAGAGGACAGCAGGGCAGGTGGGGTTCCGAGAGACTCGCTaGCATCCTCTCCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTASETSCVIQRTAGQVGFRETR*HPLQLL Trigger: AAGCAGCTGGAGAGGATGGCAGCGAGTCTCTCGGAA...CCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCCAGGGCACAGTGGGACTTCACTGGGATCTaGCAGGAGGGGATCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAFGTGKEEATSQARAQWDFTGI*QEGIFG Trigger: CCCGAAGATCCCCTCCTGGCAGATCCCAGTGAAGTC...CCACTGTGCCCTGGCCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CCA 90 bp | TCGTCGGCAGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCGGAACTTCACTGCTGTaGCAATCAGTGGCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAAVPDCWKARSISSSVGTSLL*QSVALG Trigger: CCCGAGAGCCACTGATTGCCACAGCAGTGAAGTTCC...GACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTGGGAAGGTCAGACATGGCTGTTGGTCAGGAAGGCCCTGCTGCCTGTTGATGTGGTGGCCTTaGCAGTGGCCAGCTCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSGKVRHGCWSGRPCCLLMWWP*QWPARE Trigger: CTCACGAGCTGGCCACTGCCAAGGCCACCACATCAA...CAGGCAGCAGGGCCTTCCTGACCAACAGCCATGTCTGACCTTCCCACTGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | GGCGTTGAGTGCAGAGCTCCTGAGTTCTCTGCCTGGCTTGTGGACAGCCAGAGCACTCCAGGATCCAGTTaGTTGATGTGGTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVECRAPEFSAWLVDSQSTPGSS*LMWWPW Trigger: CCAAGGCCACCACATCAACCAACTGGATCCTGGAGT...GCTCTGGCTGTCCACAAGCCAGGCAGAGAACTCAGGAGCTCTGCACTCAACGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR GCA 90 bp | CTGGCTTTTGGAACAGGCAAAGAAGAAGCCACAAGCCAGGCCAGGGCACAGTGGAGCTCCTGGACCTTCTaGTGCTGCTGTCTCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFGTGKEEATSQARAQWSSWTF*CCCLSS Trigger: GCTACTGAGACAGCAGCAGCAGAAGGTCCAGGAGCT...CCACTGTGCCCTGGCCTGGCTTGTGGCTTCTTCTTTGCCTGTTCCAAAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR GCA 90 bp | GACACAGCAAGCGAGACGTCTTGTGTGATACAGAGGACAGCAGGGCAGGTGGGGCGCAGCTTCTCTACCTaGTCATTGATCTGCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: DTASETSCVIQRTAGQVGRSFST*SLICPS Trigger: CGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCG...CCCCACCTGCCCTGCTGTCCTCTGTATCACACAAGACGTCTCGCTTGCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | CATGAGCTCTGGCCATGCATGGTGCCAGGTGGTCAAGATACTCGGAGGATACACAGTTGGTTGATGTGGTaGCCTTGGCAGTGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HELWPCMVPGGQDTRRIHSWLMW*PWQWPA Trigger: AGCTGGCCACTGCCAAGGCCACCACATCAACCAACT...GTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR TCA 90 bp | CATGAGCTCTGGCCATGCATGGTGCCAGGTGGTCAAGATACTCGGAGGATACACCCTCATCCACATGGCTaGCGTCATCATCCTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: HELWPCMVPGGQDTRRIHPHPHG*RHHPHR Trigger: ACGATGAGGATGATGACGTCAGCCATGTGGATGAGG...GTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CCA 90 bp | CGGCAGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCACATTTTCACTTCCTaGAGGAGAGCTTGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQLCPTAGKPGQSLRLSVHIFTS*RRAWLV Trigger: AACCAGCCAAGCTCTCCTCCAGGAAGTGAAAATGTG...GACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTGTAGCACAGTCTTGTCTGTaGGAAATCTGGCCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVPDCWKARSISSSVSPVAQSCL*EIWPVC Trigger: ACACACAGGCCAGATTTCTCACAGACAAGACTGTGC...TACAGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCARLLESQVNLFVCQSFLLKK*SPGRKW Trigger: CCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAA...GGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTGTCTGGCCTGTGTGTGCTaGTTTCTTCTTAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SCARLLESQVNLFVCQSCLACVC*FLLKKC Trigger: GCATTTCTTAAGAAGAAAGCAGCACACACAGGCCAG...ACAGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR GCA 90 bp | TCGGCAGCTGTGCCCGACTGCTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTAATCTGGCCTGTGTGTaGTGCTTTCTTCTTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAAVPDCWKARSISSSVSNLACV*CFLLKK Trigger: TTTCTTAAGAAGAAAGCAGCACACACAGGCCAGATT...ACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGCTCTGGCCATGCATGGTGCCAGGTGGTCAAGATACTCGGAGGATACACAGCTCATTAATATTCTaGGACTCCAGGATCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HELWPCMVPGGQDTRRIHSSLIF*DSRIQL Trigger: CAACTGGATCCTGGAGTCCCAGAATATTAATGAGCT...GTGTATCCTCCGAGTATCTTGACCACCTGGCACCATGCATGGCCAGAGCTCATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS GCA 90 bp | CTGGCACCTTCCGGCCGCCGCAGCTTCTCTACCTGCTCATTGATCTaGCCATCGCCGCCCCGTCGGTCCTCCCTCTGCACCCCAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LAPSGRRSFSTCSLI*PSPPRRSSLCTPRT Trigger: CGTCCTTGGGGTGCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS TCA 90 bp | CATTGCTGGCACCTTCCGGCCGCCGCAGCTTCTCTACCTGCTCATTaGTCTGCCCATCGCCGCCCCGTCGGTCCTCCCTCTGCACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HCWHLPAAAASLPAH*SAHRRPVGPPSAPQ Trigger: TTGGGGTGCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGCCAGCAATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS GCA 90 bp | TCAGTCTCATTGCTGGCACCTTCCGGCCGCCGCAGCTTCTCTACCTaGTCATTGATCTGCCCATCGCCGCCCCGTCGGTCCTCCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSLLAPSGRRSFST*SLICPSPPRRSSLC Trigger: GCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGCCAGCAATGAGACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CAA 90 bp | ACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTGCTCTCGCTCAGTCTCATaGCTGGCACCTTCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLTRHLSGRGRGSRGVECSRSVS*LAPSGR Trigger: GCGGCCGGAAGGTGCCAGCAATGAGACTGAGCGAGA...GCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS TCA 90 bp | GGCCGTGGAGCCCTCCGGGCTGTGGCTGTCCTTCCCAGGAGAGGATaGCGTAGACTCGTTGCTGACAGGGGAGATGTCACTGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGALRAVAVLPRRG*RRLVADRGDVTAAV Trigger: CACAGCAGCAGTGACATCTCCCCTGTCAGCAACGAGTCTACGTCATCCTCTCCTGGGAAGGACAGCCACAGCCCGGAGGGCTCCACGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS GCA 90 bp | ACCTGCTCATTGATCTGCCCATCGCCGCCCCGTCGGTCCTCCCTCTaGACCCCAAGGACGTCCTCCTCATCCACATGGCTGACGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TCSLICPSPPRRSSL*TPRTSSSSTWLTSS Trigger: TGATGACGTCAGCCATGTGGATGAGGAGGACGTCCTTGGGGTGCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CAA 90 bp | ACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTTGAGTGCCCAGGATCCAGTTGGTaGATGTGGTGGCCTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLTRHLSGRGRGSRGVECPGSSW*MWWPWQ Trigger: CTGCCAAGGCCACCACATCAACCAACTGGATCCTGG...GCACTCAACGCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS GCA 90 bp | CAGAGGCCAGTGTTGTCTGCACCTGAGTCACTGTCTGGGCCACGGTaGCACTCAGTTCCGAGAGACTCGCTGCCATCCTCTCCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRPVLSAPESLSGPR*HSVPRDSLPSSPAA Trigger: AGCAGCTGGAGAGGATGGCAGCGAGTCTCTCGGAACTGAGTGGCACCGTGGCCCAGACAGTGACTCAGGTGCAGACAACACTGGCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CAA 90 bp | GGAGGATACACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGACTCCAGGATCCAGTaGGTTGATGTGGTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGYTLTRHLSGRGRGSRGDSRIQ*VDVVAL Trigger: CAAGGCCACCACATCAACCAACTGGATCCTGGAGTC...GCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGTGTATCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CAA 90 bp | GCCAGGACTTTGGAAGGCTGGGTCCTAGGAGGCCCGCAAGATGAAGAGCAGGCCTTCTCTACCTGCTCATaGATCTGCCCATCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARTLEGWVLGGPQDEEQAFSTCS*ICPSPP Trigger: GGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAA...GGCCTGCTCTTCATCTTGCGGGCCTCCTAGGACCCAGCCTTCCAAAGTCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS GCA 90 bp | GTAGCTGGGCCCAGGGGTGAAGGCTCGTCGGCAGCTGTGCCCGACTaGTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAGPRGEGSSAAVPD*WKARSISSSVSPFF Trigger: GAAGAAAGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGAGCCTTCACCCCTGGGCCCAGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
||
| CDS-3UTR CAA 90 bp | TGCGCTGAAGGGCAGCCCCACCCCTACCTGGGCTTCCGCCCAGTCGTGGAGGCAAGTCCTTTCAAGGAGTaGATTTCCGACTTGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CAEGQPHPYLGFRPVVEASPFKE*ISDLSS Trigger: TGAGCTCAAGTCGGAAATCAACTCCTTGAAAGGACT...TGCCTCCACGACTGGGCGGAAGCCCAGGTAGGGGTGGGGCTGCCCTTCAGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 90 bp | GCTGGGCCCAGGGGTGAAGGCTCGTCGGCAGCTGTGCCCGACTGCTaGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCTTTCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: AGPRGEGSSAAVPDC*KARSISSSVSPFFL Trigger: TAAGAAGAAAGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGAGCCTTCACCCCTGGGCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS TCA 90 bp | TGCTGTCTCAGTAGCTCTTGGACAGAGGCCAGTGTTGTCTGCACCTaGGTCACTGTCTGGGCCACGGTGCCACTCAGTTCCGAGAGACTC | + |
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Preference number: 5 (lower is better) Translates to: CCLSSSWTEASVVCT*VTVWATVPLSSERL Trigger: GAGTCTCTCGGAACTGAGTGGCACCGTGGCCCAGACAGTGACTCAGGTGCAGACAACACTGGCCTCTGTCCAAGAGCTACTGAGACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTGGGAAGGTCAGACATGGCTGTTGGTCAGGAAGGCCCTGCTGCCTGGGACAGAGGCCAGTGTaGTCTGCACCTGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: FLSGKVRHGCWSGRPCCLGQRPV*SAPESL Trigger: CAGTGACTCAGGTGCAGACAACACTGGCCTCTGTCC...CAGGCAGCAGGGCCTTCCTGACCAACAGCCATGTCTGACCTTCCCACTGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS-3UTR CAA 90 bp | GGAGGATACACCTTGACAAGACACCTGTCAGGGAGGGGGCGAGGCAGCAGGGGCGTACCTCTTGTAGAGTaGGTGAAAGCCAAATGCAAT | + |
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Preference number: 5 (lower is better) Translates to: GGYTLTRHLSGRGRGSRGVPLVE*VKAKCN Trigger: ATTGCATTTGGCTTTCACCAACTCTACAAGAGGTAC...GCCCCTGCTGCCTCGCCCCCTCCCTGACAGGTGTCTTGTCAAGGTGTATCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 90 bp | AGCCAGGTCAATCTCTTCGTCTGTCAGTCCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGGGCTCTGCCGGACCCGAGAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: SQVNLFVCQSFLLKK*SPGRKWALPDPRIL Trigger: CAGAATTCTCGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGGACTGACAGACGAAGAGATTGACCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 90 bp | GCTGCTTTCTTCTTAAGAAATGCTCTCCTGGTCGCAAGTGGGCTCTaGCGGACCCGAGAATTCTGTAGGAACTTCACTGCTGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: AAFFLRNALLVASGL*RTREFCRNFTAVAI Trigger: GATTGCCACAGCAGTGAAGTTCCTACAGAATTCTCGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS GCA 90 bp | TCTGTGAGAAATCTGGCCTGTGTGTGCTGCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGGGCTCTGCCGGACCCGAGAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: SVRNLACVCCFLLKK*SPGRKWALPDPRIL Trigger: CAGAATTCTCGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGCAGCACACACAGGCCAGATTTCTCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS GCA 90 bp | CAGCAGGTACCTCTTGTAGAGTTGGTGAAAGCCAAATGCAATTCCTaGCATGATGATAGCCAAGGCACCATAATCTCGCCATCGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: QQVPLVELVKAKCNS*HDDSQGTIISPSGA Trigger: GGCTCCCGATGGCGAGATTATGGTGCCTTGGCTATCATCATGGCAGGAATTGCATTTGGCTTTCACCAACTCTACAAGAGGTACCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 90 bp | GAGCTCAGCACAGTCTTGTCTGTGAGAAATCTGGCCTGTGTGTGCTaGTTTCTTCTTAAGAAATGCTCTCCTGGTCGCAAGTGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ELSTVLSVRNLACVC*FLLKKCSPGRKWAL Trigger: CAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGCAGCACACACAGGCCAGATTTCTCACAGACAAGACTGTGCTGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS GCA 90 bp | GATGAGGGGCAGCAGGTACCTCTTGTAGAGTTGGTGAAAGCCAAATaGAATTCCTGCCATGATGATAGCCAAGGCACCATAATCTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: DEGQQVPLVELVKAK*NSCHDDSQGTIISP Trigger: TGGCGAGATTATGGTGCCTTGGCTATCATCATGGCAGGAATTGCATTTGGCTTTCACCAACTCTACAAGAGGTACCTGCTGCCCCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 90 bp | AGTCCTTTCAAGGAGTTGATTTCCGACTTGAGCTCATTAATATTCTaGGACTCCAGGATCCAGTTGGTTGATGTGGTGGCCTTGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SPFKELISDLSSLIF*DSRIQLVDVVALAV Trigger: CACTGCCAAGGCCACCACATCAACCAACTGGATCCTGGAGTCCCAGAATATTAATGAGCTCAAGTCGGAAATCAACTCCTTGAAAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 72 bp | CCTCTTCCTGGGGACCCAGCAGGTGGTATGTGGCCGTaGAGCCCTCCGGGCTGTGGCTGTCCTTCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLPGDPAGGMWP*SPPGCGCPSQE Trigger: CTCCTGGGAAGGACAGCCACAGCCCGGAGGGCTCCACGGCCACATACCACCTGCTGGGTCCCCAGGAAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 72 bp | GCACCTTCCGGCCGCCGCAGCTTCTCTACCTGCTCATaGATCTGCCCATCGCCGCCCCGTCGGTCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: APSGRRSFSTCS*ICPSPPRRSSL Trigger: GAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS TCA 72 bp | CTGGACAGGAACCACTGGGGTAGCTGGGCCCAGGGGTaGAGGCTCGTCGGCAGCTGTGCCCGACTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LDRNHWGSWAQG*RLVGSCARLLE Trigger: TTCCAGCAGTCGGGCACAGCTGCCGACGAGCCTTCACCCCTGGGCCCAGCTACCCCAGTGGTTCCTGTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | TTGCTGGCACCTTCCGGCCGCCGCAGCTTCTCTACCTaGTCATTGATCTGCCCATCGCCGCCCCGTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLAPSGRRSFST*SLICPSPPRRS Trigger: GGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGCCAGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 72 bp | CTTCACCCTCTTCCTGGGGACCCAGCAGGTGGTATGTaGCCGTGGAGCCCTCCGGGCTGTGGCTGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LHPLPGDPAGGM*PWSPPGCGCPS Trigger: GGAAGGACAGCCACAGCCCGGAGGGCTCCACGGCCACATACCACCTGCTGGGTCCCCAGGAAGAGGGTGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 90 bp | TCATTGCTGGCACCTTCCGGCCGCCGCAGCTTCTCTACCTGCTCATaGATCTGCCCATCGCCGCCCCGTCGGTCCTCCCTCTGCACCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLLAPSGRRSFSTCS*ICPSPPRRSSLCTP Trigger: TGGGGTGCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAATGAGCAGGTAGAGAAGCTGCGGCGGCCGGAAGGTGCCAGCAATGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | TTGATCTGCCCATCGCCGCCCCGTCGGTCCTCCCTCTaGACCCCAAGGACGTCCTCCTCATCCACATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LICPSPPRRSSL*TPRTSSSSTWL Trigger: CAGCCATGTGGATGAGGAGGACGTCCTTGGGGTGCAGAGGGAGGACCGACGGGGCGGCGATGGGCAGATCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 72 bp | TGGCCCTTGACATCTAGCACCCCTTCACCCTCTTCCTaGGGACCCAGCAGGTGGTATGTGGCCGTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: WPLTSSTPSPSS*GPSRWYVAVEP Trigger: GGGCTCCACGGCCACATACCACCTGCTGGGTCCCCAGGAAGAGGGTGAAGGGGTGCTAGATGTCAAGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | CCCAGGGGTGAAGGCTCGTCGGCAGCTGTGCCCGACTaGTGGAAAGCCAGGTCAATCTCTTCGTCTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PRGEGSSAAVPD*WKARSISSSVS Trigger: ACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGAGCCTTCACCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 90 bp | TCCGGGCTGTGGCTGTCCTTCCCAGGAGAGGATGACGTAGACTCGTaGCTGACAGGGGAGATGTCACTGCTGCTGTGGTGGTTGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SGLWLSFPGEDDVDS*LTGEMSLLLWWLTA Trigger: GGCTGTCAACCACCACAGCAGCAGTGACATCTCCCCTGTCAGCAACGAGTCTACGTCATCCTCTCCTGGGAAGGACAGCCACAGCCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS TCA 72 bp | TTGGTTGATGTGGTGGCCTTGGCAGTGGCCAGCTCGTaGGCTAGCTCCTGGACCTTCTGCTGCTGCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVDVVALAVASS*ASSWTFCCCCL Trigger: GAGACAGCAGCAGCAGAAGGTCCAGGAGCTAGCTCACGAGCTGGCCACTGCCAAGGCCACCACATCAACCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | GTGTTGTCTGCACCTGAGTCACTGTCTGGGCCACGGTaGCACTCAGTTCCGAGAGACTCGCTGCCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLSAPESLSGPR*HSVPRDSLPSS Trigger: AGAGGATGGCAGCGAGTCTCTCGGAACTGAGTGGCACCGTGGCCCAGACAGTGACTCAGGTGCAGACAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 72 bp | AGGGGTGAAGGCTCGTCGGCAGCTGTGCCCGACTGCTaGAAAGCCAGGTCAATCTCTTCGTCTGTCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RGEGSSAAVPDC*KARSISSSVSP Trigger: AGGACTGACAGACGAAGAGATTGACCTGGCTTTCCAGCAGTCGGGCACAGCTGCCGACGAGCCTTCACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 90 bp | CCTTCTGCTGCTGCTGTCTCAGTAGCTCTTGGACAGAGGCCAGTGTaGTCTGCACCTGAGTCACTGTCTGGGCCACGGTGCCACTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSAAAVSVALGQRPV*SAPESLSGPRCHSV Trigger: AACTGAGTGGCACCGTGGCCCAGACAGTGACTCAGGTGCAGACAACACTGGCCTCTGTCCAAGAGCTACTGAGACAGCAGCAGCAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CCA 72 bp | AATCAGTGGCTCTCGGGGCACCACATTTTCACTTCCTaGAGGAGAGCTTGGCTGGTTCGGCTGCTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NQWLSGHHIFTS*RRAWLVRLLCL Trigger: CAGGCAGAGCAGCCGAACCAGCCAAGCTCTCCTCCAGGAAGTGAAAATGTGGTGCCCCGAGAGCCACTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103217.11 ENSMUST00000134747.2 |
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| CDS CAA 72 bp | TGGCTGTCCTTCCCAGGAGAGGATGACGTAGACTCGTaGCTGACAGGGGAGATGTCACTGCTGCTGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: WLSFPGEDDVDS*LTGEMSLLLWW Trigger: CCACCACAGCAGCAGTGACATCTCCCCTGTCAGCAACGAGTCTACGTCATCCTCTCCTGGGAAGGACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | AATCTGGCCTGTGTGTGCTGCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGGGCTCTGCCGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: NLACVCCFLLKK*SPGRKWALPDP Trigger: CGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGCAGCACACACAGGCCAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS GCA 72 bp | AATCTCTTCGTCTGTCAGTCCTTTCTTCTTAAGAAATaGTCTCCTGGTCGCAAGTGGGCTCTGCCGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: NLFVCQSFLLKK*SPGRKWALPDP Trigger: CGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGGACTGACAGACGAAGAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | TTCTTAAGAAATGCTCTCCTGGTCGCAAGTGGGCTCTaGCGGACCCGAGAATTCTGTAGGAACTTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLRNALLVASGL*RTREFCRNFTA Trigger: AGCAGTGAAGTTCCTACAGAATTCTCGGGTCCGGCAGAGCCCACTTGCGACCAGGAGAGCATTTCTTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103217.11 ENSMUST00000134747.2 |
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| CDS CAA 72 bp | TCCCAGGATGAGGGGCAGCAGGTACCTCTTGTAGAGTaGGTGAAAGCCAAATGCAATTCCTGCCATGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SQDEGQQVPLVE*VKAKCNSCHDD Trigger: ATCATCATGGCAGGAATTGCATTTGGCTTTCACCAACTCTACAAGAGGTACCTGCTGCCCCTCATCCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | CCTCTTGTAGAGTTGGTGAAAGCCAAATGCAATTCCTaGCATGATGATAGCCAAGGCACCATAATCTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLVELVKAKCNS*HDDSQGTIISP Trigger: TGGCGAGATTATGGTGCCTTGGCTATCATCATGGCAGGAATTGCATTTGGCTTTCACCAACTCTACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS GCA 72 bp | ACAGTCTTGTCTGTGAGAAATCTGGCCTGTGTGTGCTaGTTTCTTCTTAAGAAATGCTCTCCTGGTCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TVLSVRNLACVC*FLLKKCSPGRK Trigger: CTTGCGACCAGGAGAGCATTTCTTAAGAAGAAAGCAGCACACACAGGCCAGATTTCTCACAGACAAGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS CCA 72 bp | AAGGAGTTGATTTCCGACTTGAGCTCATTAATATTCTaGGACTCCAGGATCCAGTTGGTTGATGTGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KELISDLSSLIF*DSRIQLVDVVA Trigger: GGCCACCACATCAACCAACTGGATCCTGGAGTCCCAGAATATTAATGAGCTCAAGTCGGAAATCAACTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 72 bp | TCACTTCAACACCATTACAGTGAGCTCAGCACAGTCTaGTCTGTGAGAAATCTGGCCTGTGTGTGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLQHHYSELSTV*SVRNLACVCCF Trigger: AAAGCAGCACACACAGGCCAGATTTCTCACAGACAAGACTGTGCTGAGCTCACTGTAATGGTGTTGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS TCA 72 bp | AACACCATTACAGTGAGCTCAGCACAGTCTTGTCTGTaGGAAATCTGGCCTGTGTGTGCTGCTTTCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: NTITVSSAQSCL*EIWPVCAAFFL Trigger: TAAGAAGAAAGCAGCACACACAGGCCAGATTTCTCACAGACAAGACTGTGCTGAGCTCACTGTAATGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134747.2 |
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| CDS CAA 90 bp | GAAGGAGGGAACTGTCTCCGATTCAAAAGAAGTCCTTTCAAGGAGTaGATTTCCGACTTGAGCTCATTAATATTCTGGGACTCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: EGGNCLRFKRSPFKE*ISDLSSLIFWDSRI Trigger: GATCCTGGAGTCCCAGAATATTAATGAGCTCAAGTCGGAAATCAACTCCTTGAAAGGACTTCTTTTGAATCGGAGACAGTTCCCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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| CDS CAA 72 bp | AACTGTCTCCGATTCAAAAGAAGTCCTTTCAAGGAGTaGATTTCCGACTTGAGCTCATTAATATTCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: NCLRFKRSPFKE*ISDLSSLIFWD Trigger: GTCCCAGAATATTAATGAGCTCAAGTCGGAAATCAACTCCTTGAAAGGACTTCTTTTGAATCGGAGACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103217.11 |
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