Pregenerated sensors for PEX12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018733Ensembl transcript IDs: ENSMUST00000018877.9, ENSMUST00000108146.8, ENSMUST00000175741.8, ENSMUST00000176518.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTACTTTTGACAGTCTCCCTATGGTGGCCTTGAACTCAAAATCCTaGCTCCATCTCCAGAGTGTTGATACTATACTACCACATCCAACT | + |
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Preference number: 1 (lower is better) Translates to: FTFDSLPMVALNSKS*LHLQSVDTILPHPT Trigger: AGTTGGATGTGGTAGTATAGTATCAACACTCTGGAGATGGAGGCAGGATTTTGAGTTCAAGGCCACCATAGGGAGACTGTCAAAAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR TCA 90 bp | GGATTTTACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTaGAATTTCCAGACTCCTCCCTATAAACAAACCCTATCCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: GFYCISPLPASFHSY*NFQTPPYKQTLSQD Trigger: GTCTTGGGATAGGGTTTGTTTATAGGGAGGAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGTAAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR TCA 90 bp | ATATCATGTTCATGGTACCAGCGATTATGCGCTCAATTGCCAGCATaGATCACAGTAGGCACTTGGAAATTATTTTCATCTGGCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: ISCSWYQRLCAQLPA*ITVGTWKLFSSGLH Trigger: ATGCAAGCCAGATGAAAATAATTTCCAAGTGCCTACTGTGATTCATGCTGGCAATTGAGCGCATAATCGCTGGTACCATGAACATGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| 3UTR TCA 90 bp | TGTTTCATAGAAACTTTCATAATACCTAGCATGATTCATATCAACTaGGCAAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: CFIETFIIPSMIHIN*ANCQLSKLMRASRR Trigger: CCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTTGCTCAGTTGATATGAATCATGCTAGGTATTATGAAAGTTTCTATGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAAGTTTTCATTCATACTaGAATTTCCAGACTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ASRRLLPFINSSLGRHQVSFHSY*NFQTPP Trigger: GGGAGGAGTCTGGAAATTTCAGTATGAATGAAAACT...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGATAGAACTTGAGTGGTaGGATAATGCACTAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKRRPASQTTCFIRSNLRIELEW*DNALSS Trigger: AGAGCTTAGTGCATTATCTCACCACTCAAGTTCTAT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGAGTATCACTGTTGTCTaGCATACTAAAACCGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKRRPASQTTCFIRSNLRSITVV*HTKTVS Trigger: TGAGACGGTTTTAGTATGGCAGACAACAGTGATACT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTGAACTCAAAATCCTaGCTCCATCTCCAGAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PASQTTCFIRSNLRFPVILNSKS*LHLQSV Trigger: AACACTCTGGAGATGGAGGCAGGATTTTGAGTTCAA...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAAGTATCACTGTTGTCTaGCATACTAAAACCGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PASQTTCFIRSNLRFPVISITVV*HTKTVS Trigger: TGAGACGGTTTTAGTATGGCAGACAACAGTGATACT...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCATAGAACTTGAGTGGTaGGATAATGCACTAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TASHHCLLVFIHTEISRLIELEW*DNALSS Trigger: AGAGCTTAGTGCATTATCTCACCACTCAAGTTCTAT...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCAGTATCACTGTTGTCTaGCATACTAAAACCGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TASHHCLLVFIHTEISRLSITVV*HTKTVS Trigger: TGAGACGGTTTTAGTATGGCAGACAACAGTGATACT...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTATAGAACTTGAGTGGTaGGATAATGCACTAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSIELEW*DNALSS Trigger: AGAGCTTAGTGCATTATCTCACCACTCAAGTTCTAT...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGGCAAATGTTATTTCATACAAGGTGGTATCTGTGCTGTTAGAACAGGATCTTTCATTTTACTTTTaGCAGTCTCCCTATGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FLANVISYKVVSVLLEQDLSFYF*QSPYGG Trigger: GCCACCATAGGGAGACTGTCAAAAGTAAAATGAAAG...ATCCTGTTCTAACAGCACAGATACCACCTTGTATGAAATAACATTTGCCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTAGAGAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGATAGAACTTGAGTGGTaGGATAATGCACTAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LGREQTKRLGSNGYILLKIELEW*DNALSS Trigger: AGAGCTTAGTGCATTATCTCACCACTCAAGTTCTAT...CTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTCTCTACCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTAGAGAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAGTATCACTGTTGTCTaGCATACTAAAACCGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGREQTKRLGSNGYILLKSITVV*HTKTVS Trigger: TGAGACGGTTTTAGTATGGCAGACAACAGTGATACT...CTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTCTCTACCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGCAAATGTTATTTCATACAAGGTGGTATCTGTGCTGTTAGAACAGGATATCCCAAGACAAGTATaGATCATCAAGGAAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLANVISYKVVSVLLEQDIPRQV*IIKEIF Trigger: GAAGATTTCCTTGATGATCCATACTTGTCTTGGGAT...ATCCTGTTCTAACAGCACAGATACCACCTTGTATGAAATAACATTTGCCAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| 3UTR-3UTR CAA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATCTCCCTATGGTGGCCTaGAACTCAAAATCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLPVEQTHESKQKASALHLPMVA*NSKSCL Trigger: GAGGCAGGATTTTGAGTTCAAGGCCACCATAGGGAG...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATTCCTGCTTAACCAGCTaGGTAGAGAGCAAACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLPVEQTHESKQKASALHSCLTS*VESKPK Trigger: TTTTGGTTTGCTCTCTACCAAGCTGGTTAAGCAGGA...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR GCA 72 bp | GACAGTCTCCCTATGGTGGCCTTGAACTCAAAATCCTaGCTCCATCTCCAGAGTGTTGATACTATACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: DSLPMVALNSKS*LHLQSVDTILP Trigger: TGGTAGTATAGTATCAACACTCTGGAGATGGAGGCAGGATTTTGAGTTCAAGGCCACCATAGGGAGACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCCTCCCTATGGTGGCCTaGAACTCAAAATCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TASHHCLLVFIHTEISRLLPMVA*NSKSCL Trigger: GAGGCAGGATTTTGAGTTCAAGGCCACCATAGGGAG...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTCTCCCTATGGTGGCCTaGAACTCAAAATCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSLPMVA*NSKSCL Trigger: GAGGCAGGATTTTGAGTTCAAGGCCACCATAGGGAG...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATACTTTCATTTTACTTTaGACAGTCTCCCTATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KLPVEQTHESKQKASALHTFILL*TVSLWW Trigger: CCACCATAGGGAGACTGTCAAAAGTAAAATGAAAGT...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATCCATCTCCAGAGTGTaGATACTATACTACCACATC | + |
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Preference number: 3 (lower is better) Translates to: PASQTTCFIRSNLRFPVISISRV*ILYYHI Trigger: GATGTGGTAGTATAGTATCAACACTCTGGAGATGGA...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR TCA 72 bp | TCATGGTACCAGCGATTATGCGCTCAATTGCCAGCATaGATCACAGTAGGCACTTGGAAATTATTTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: SWYQRLCAQLPA*ITVGTWKLFSS Trigger: AGATGAAAATAATTTCCAAGTGCCTACTGTGATTCATGCTGGCAATTGAGCGCATAATCGCTGGTACCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| 3UTR GCA 72 bp | TGTTTTCTAAAGAGAAGGCCTGCTTCCCAAACCACTTaGTTTATAAGGTCTAACCTGAGGTTTCCTGTGATA | + |
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Preference number: 3 (lower is better) Translates to: CFLKRRPASQTT*FIRSNLRFPVI Trigger: TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAGAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCTCCATCTCCAGAGTGTaGATACTATACTACCACATC | + |
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Preference number: 3 (lower is better) Translates to: TASHHCLLVFIHTEISRLSISRV*ILYYHI Trigger: GATGTGGTAGTATAGTATCAACACTCTGGAGATGGA...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTTCCTGCTTAACCAGCTaGGTAGAGAGCAAACCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PEVSCDILSLLISLSLSFSCLTS*VESKPK Trigger: TTTTGGTTTGCTCTCTACCAAGCTGGTTAAGCAGGA...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR TCA 72 bp | TGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTaGAATTTCCAGACTCCTCCCTATAAACAAACCCTA | + |
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Preference number: 3 (lower is better) Translates to: CISPLPASFHSY*NFQTPPYKQTL Trigger: TAGGGTTTGTTTATAGGGAGGAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTTCCATCTCCAGAGTGTaGATACTATACTACCACATC | + |
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Preference number: 3 (lower is better) Translates to: PEVSCDILSLLISLSLSFSISRV*ILYYHI Trigger: GATGTGGTAGTATAGTATCAACACTCTGGAGATGGA...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTATCCAGAGGTGTTCCTTaGGAAGACCAGCACTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ASRRLLPFINSSLGRHQVSRGVP*EDQHWP Trigger: CGGCCAGTGCTGGTCTTCCCAAGGAACACCTCTGGA...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATTTCAGCAGGGGAGAGTaGTGCTCAGCTTTCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KLPVEQTHESKQKASALHFSRGE*CSAFPK Trigger: CTTGGGGAAAGCTGAGCATCACTCTCCCCTGCTGAA...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTGGGAAGACCAGCACTaGCCGGTCTCTGAAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: LKRRPASQTTCFIRSNLRWEDQH*PVSEDA Trigger: CGCATCTTCAGAGACCGGCCAGTGCTGGTCTTCCCA...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAATTCTGCAAGAACCTTaGCCACATGCTGAAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ASRRLLPFINSSLGRHQVILQEP*PHAEER Trigger: CCGCTCTTCAGCATGTGGTCAAGGTTCTTGCAGAAT...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATATTCTGCAAGAACCTTaGCCACATGCTGAAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: KLPVEQTHESKQKASALHILQEP*PHAEER Trigger: CCGCTCTTCAGCATGTGGTCAAGGTTCTTGCAGAAT...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAGCTCCTGCATTGCACTaGCTTCAACCAGTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ASRRLLPFINSSLGRHQVAPALH*LQPVSV Trigger: AACAGAGACTGGTTGAAGCCAGTGCAATGCAGGAGC...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAGGGCAGGGCAGTCAGTaGTTTGATGGCTTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIGQGSQ*FDGFLV Trigger: AACCAAGAAGCCATCAAATCACTGACTGCCCTGCCC...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCTGGGAAGACCAGCACTaGCCGGTCTCTGAAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: TASHHCLLVFIHTEISRLWEDQH*PVSEDA Trigger: CGCATCTTCAGAGACCGGCCAGTGCTGGTCTTCCCA...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAATTCTGCAAGAACCTTaGCCACATGCTGAAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIILQEP*PHAEER Trigger: CCGCTCTTCAGCATGTGGTCAAGGTTCTTGCAGAAT...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | GCATTAATGATTTTTCAGAAGCTGTTTCTTCACCAGCTTGTCCATCCAATGTCATGGGAAGACCAGCACTaGCCGGTCTCTGAAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: ALMIFQKLFLHQLVHPMSWEDQH*PVSEDA Trigger: CGCATCTTCAGAGACCGGCCAGTGCTGGTCTTCCCA...TGACATTGGATGGACAAGCTGGTGAAGAAACAGCTTCTGAAAAATCATTAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| CDS-3UTR CCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAGCTCCTGCATTGCACTaGCTTCAACCAGTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIAPALH*LQPVSV Trigger: AACAGAGACTGGTTGAAGCCAGTGCAATGCAGGAGC...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR TCA 90 bp | GCATTAATGATTTTTCAGAAGCTGTTTCTTCACCAGCTTGTCCATCCAATGTCATTCAGCAGGGGAGAGTaGTGCTCAGCTTTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALMIFQKLFLHQLVHPMSFSRGE*CSAFPK Trigger: CTTGGGGAAAGCTGAGCATCACTCTCCCCTGCTGAA...TGACATTGGATGGACAAGCTGGTGAAGAAACAGCTTCTGAAAAATCATTAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTTGGGAAGACCAGCACTaGCCGGTCTCTGAAGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PEVSCDILSLLISLSLSFWEDQH*PVSEDA Trigger: CGCATCTTCAGAGACCGGCCAGTGCTGGTCTTCCCA...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAATACATAGCCAGAGGTaGCAAGAACCGTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLLPFINSSLGRHQVIHSQR*QEPYHS Trigger: TGAATGATACGGTTCTTGCCACCTCTGGCTATGTAT...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGATGCTGGACTTCTGTTaGATACCCTGTAATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKRRPASQTTCFIRSNLRMLDFC*IPCNGT Trigger: TGTCCCATTACAGGGTATCCAACAGAAGTCCAGCAT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAGGAAGTCTAGCAGAGTaGAGATTTCATCAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIGSLAE*RFHQTT Trigger: GGTGGTTTGATGAAATCTTCACTCTGCTAGACTTCC...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGTTCAGCAGGGGAGAGTaGTGCTCAGCTTTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQTKRLGSNGYILLKKPMFSRGE*CSAFPK Trigger: CTTGGGGAAAGCTGAGCATCACTCTCCCCTGCTGAA...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGATACATAGCCAGAGGTaGCAAGAACCGTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRRPASQTTCFIRSNLRIHSQR*QEPYHS Trigger: TGAATGATACGGTTCTTGCCACCTCTGGCTATGTAT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAATGCTGGACTTCTGTTaGATACCCTGTAATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIMLDFC*IPCNGT Trigger: TGTCCCATTACAGGGTATCCAACAGAAGTCCAGCAT...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTGGGCAGGGCAGTCAGTaGTTTGATGGCTTCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEVSCDILSLLISLSLSFGQGSQ*FDGFLV Trigger: AACCAAGAAGCCATCAAATCACTGACTGCCCTGCCC...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAGATTTGATGGCTTCTTaGTTCTCAGAAGAGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVIDLMAS*FSEEYH Trigger: GTGGTACTCTTCTGAGAACCAAGAAGCCATCAAATC...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAAGTTTTACGACAGAGTaGGCACACTGTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLLPFINSSLGRHQVSFTTE*AHCFHF Trigger: AAAATGAAAACAGTGTGCCCACTCTGTCGTAAAACT...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATAGTTTTACGACAGAGTaGGCACACTGTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPVEQTHESKQKASALHSFTTE*AHCFHF Trigger: AAAATGAAAACAGTGTGCCCACTCTGTCGTAAAACT...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATAGTTTAATTAGATGCTaGACTTCTGTTGGATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPVEQTHESKQKASALHSLIRC*TSVGYP Trigger: AGGGTATCCAACAGAAGTCCAGCATCTAATTAAACT...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGGCTCCTGCATTGCACTaGCTTCAACCAGTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQTKRLGSNGYILLKKPMAPALH*LQPVSV Trigger: AACAGAGACTGGTTGAAGCCAGTGCAATGCAGGAGC...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAGAGAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGGCTCCTGCATTGCACTaGCTTCAACCAGTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGREQTKRLGSNGYILLKAPALH*LQPVSV Trigger: AACAGAGACTGGTTGAAGCCAGTGCAATGCAGGAGC...CTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTCTCTACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGAGTTTAATTAGATGCTaGACTTCTGTTGGATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRRPASQTTCFIRSNLRSLIRC*TSVGYP Trigger: AGGGTATCCAACAGAAGTCCAGCATCTAATTAAACT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR TCA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTGGAAGTCTAGCAGAGTaGAGATTTCATCAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSGSLAE*RFHQTT Trigger: GGTGGTTTGATGAAATCTTCACTCTGCTAGACTTCC...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCGATTTGATGGCTTCTTaGTTCTCAGAAGAGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TASHHCLLVFIHTEISRLDLMAS*FSEEYH Trigger: GTGGTACTCTTCTGAGAACCAAGAAGCCATCAAATC...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | TCAATTGCCAGCATGAATCACAGTAGGCACTTGGAAATTATTTTCATCTGGCTTATGCTGGACTTCTGTTaGATACCCTGTAATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIASMNHSRHLEIIFIWLMLDFC*IPCNGT Trigger: TGTCCCATTACAGGGTATCCAACAGAAGTCCAGCAT...AAGCCAGATGAAAATAATTTCCAAGTGCCTACTGTGATTCATGCTGGCAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATAAGTTTAATTAGATGCTaGACTTCTGTTGGATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PASQTTCFIRSNLRFPVISLIRC*TSVGYP Trigger: AGGGTATCCAACAGAAGTCCAGCATCTAATTAAACT...TATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTATACATAGCCAGAGGTaGCAAGAACCGTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSIHSQR*QEPYHS Trigger: TGAATGATACGGTTCTTGCCACCTCTGGCTATGTAT...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAGAGAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGATGCTGGACTTCTGTTaGATACCCTGTAATGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGREQTKRLGSNGYILLKMLDFC*IPCNGT Trigger: TGTCCCATTACAGGGTATCCAACAGAAGTCCAGCAT...CTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTCTCTACCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGATACATAGCCAGAGGTaGCAAGAACCGTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQTKRLGSNGYILLKKPMIHSQR*QEPYHS Trigger: TGAATGATACGGTTCTTGCCACCTCTGGCTATGTAT...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CCA 90 bp | GCATTAATGATTTTTCAGAAGCTGTTTCTTCACCAGCTTGTCCATCCAATGTCAAGTTTTACGACAGAGTaGGCACACTGTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALMIFQKLFLHQLVHPMSSFTTE*AHCFHF Trigger: AAAATGAAAACAGTGTGCCCACTCTGTCGTAAAACT...TGACATTGGATGGACAAGCTGGTGAAGAAACAGCTTCTGAAAAATCATTAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAGAGAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAGTTTTACGACAGAGTaGGCACACTGTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGREQTKRLGSNGYILLKSFTTE*AHCFHF Trigger: AAAATGAAAACAGTGTGCCCACTCTGTCGTAAAACT...CTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTCTCTACCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGCAAATGTTATTTCATACAAGGTGGTATCTGTGCTGTTAGAACAGGATAGTTTAATTAGATGCTaGACTTCTGTTGGATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLANVISYKVVSVLLEQDSLIRC*TSVGYP Trigger: AGGGTATCCAACAGAAGTCCAGCATCTAATTAAACT...ATCCTGTTCTAACAGCACAGATACCACCTTGTATGAAATAACATTTGCCAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGTTCCAGAGGTGTTCCTaGGGAAGACCAGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKRRPASQTTCFIRSNLRFQRCS*GRPALA Trigger: GGCCAGTGCTGGTCTTCCCAAGGAACACCTCTGGAA...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTATCTCTGTTTGATAGCTaGCATGTCCTGAGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRRLLPFINSSLGRHQVSLFDS*HVLSCQ Trigger: CTGACAGCTCAGGACATGCAAGCTATCAAACAGAGA...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGCCAGTTGAGCAAACTCATGAGAGCAAGCAGAAGGCTTCTGCCCTTCATTCTCTGTTTGATAGCTaGCATGTCCTGAGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLPVEQTHESKQKASALHSLFDS*HVLSCQ Trigger: CTGACAGCTCAGGACATGCAAGCTATCAAACAGAGA...ATGAAGGGCAGAAGCCTTCTGCTTGCTCTCATGAGTTTGCTCAACTGGCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAGAAGGCTTCTGCCCTTCATTAACTCTTCACTAGGTAGGCATCAGGTAAGGGCAGTCAGTGATTaGATGGCTTCTTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASRRLLPFINSSLGRHQVRAVSD*MASWFS Trigger: TGAGAACCAAGAAGCCATCAAATCACTGACTGCCCT...TACCTGATGCCTACCTAGTGAAGAGTTAATGAAGGGCAGAAGCCTTCTGCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | TCAATTGCCAGCATGAATCACAGTAGGCACTTGGAAATTATTTTCATCTGGCTTTTCCAGAGGTGTTCCTaGGGAAGACCAGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SIASMNHSRHLEIIFIWLFQRCS*GRPALA Trigger: GGCCAGTGCTGGTCTTCCCAAGGAACACCTCTGGAA...AAGCCAGATGAAAATAATTTCCAAGTGCCTACTGTGATTCATGCTGGCAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CAA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTTTCCAGAGGTGTTCCTaGGGAAGACCAGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSFQRCS*GRPALA Trigger: GGCCAGTGCTGGTCTTCCCAAGGAACACCTCTGGAA...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAGAGAAGGCCTGCTTCCCAAACCACTTGCTTTATAAGGTCTAACCTGAGGAGGGCAGTCAGTGATTaGATGGCTTCTTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKRRPASQTTCFIRSNLRRAVSD*MASWFS Trigger: TGAGAACCAAGAAGCCATCAAATCACTGACTGCCCT...CCTCAGGTTAGACCTTATAAAGCAAGTGGTTTGGGAAGCAGGCCTTCTCTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGTTCCAGAGGTGTTCCTaGGGAAGACCAGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQTKRLGSNGYILLKKPMFQRCS*GRPALA Trigger: GGCCAGTGCTGGTCTTCCCAAGGAACACCTCTGGAA...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCAGGGCAGTCAGTGATTaGATGGCTTCTTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TASHHCLLVFIHTEISRLRAVSD*MASWFS Trigger: TGAGAACCAAGAAGCCATCAAATCACTGACTGCCCT...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | ACCACTTGCTTTATAAGGTCTAACCTGAGGTTTCCTGTGATATTTTATCCCTCTCAAGATGTAACGCAGTaGTTGTGTAAGAAACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTCFIRSNLRFPVIFYPSQDVTQ*LCKKPA Trigger: GGCTGGTTTCTTACACAACAACTGCGTTACATCTTG...AGAGGGATAAAATATCACAGGAAACCTCAGGTTAGACCTTATAAAGCAAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGCAAATGTTATTTCATACAAGGTGGTATCTGTGCTGTTAGAACAGGATTCTCTGTTTGATAGCTaGCATGTCCTGAGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLANVISYKVVSVLLEQDSLFDS*HVLSCQ Trigger: CTGACAGCTCAGGACATGCAAGCTATCAAACAGAGA...ATCCTGTTCTAACAGCACAGATACCACCTTGTATGAAATAACATTTGCCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTTCTCTGTTTGATAGCTaGCATGTCCTGAGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEVSCDILSLLISLSLSFSLFDS*HVLSCQ Trigger: CTGACAGCTCAGGACATGCAAGCTATCAAACAGAGA...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGAGGGCAGTCAGTGATTaGATGGCTTCTTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQTKRLGSNGYILLKKPMRAVSD*MASWFS Trigger: TGAGAACCAAGAAGCCATCAAATCACTGACTGCCCT...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCATCTCACCATTGCCTGCTAGTTTTCATTCATACTGAAATTTCCAGACTCCACACTGTTTTCATTTaGGGTAAGAGGGGAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TASHHCLLVFIHTEISRLHTVFI*GKRGES Trigger: TGATTCTCCCCTCTTACCCAAAATGAAAACAGTGTG...GAGTCTGGAAATTTCAGTATGAATGAAAACTAGCAGGCAATGGTGAGATGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAATGATTTTTCAGAAGCTGTTTCTTCACCAGCTTGTCCATCCAATGTCACACACTGTTTTCATTTaGGGTAAGAGGGGAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: ALMIFQKLFLHQLVHPMSHTVFI*GKRGES Trigger: TGATTCTCCCCTCTTACCCAAAATGAAAACAGTGTG...TGACATTGGATGGACAAGCTGGTGAAGAAACAGCTTCTGAAAAATCATTAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018877.9 |
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| CDS-3UTR CAA 90 bp | GAGCAAACCAAAAGGTTAGGATCGAATGGATATATCCTTTTAAAGAAACCCATGCACACTGTTTTCATTTaGGGTAAGAGGGGAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: EQTKRLGSNGYILLKKPMHTVFI*GKRGES Trigger: TGATTCTCCCCTCTTACCCAAAATGAAAACAGTGTG...CATGGGTTTCTTTAAAAGGATATATCCATTCGATCCTAACCTTTTGGTTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGGTTTCCTGTGATATTTTATCCCTCTTAATCAGTCTCTCACTTTCATTTCACACTGTTTTCATTTaGGGTAAGAGGGGAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: PEVSCDILSLLISLSLSFHTVFI*GKRGES Trigger: TGATTCTCCCCTCTTACCCAAAATGAAAACAGTGTG...AAATGAAAGTGAGAGACTGATTAAGAGGGATAAAATATCACAGGAAACCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018877.9 ENSMUST00000108146.8 ENSMUST00000175741.8 ENSMUST00000176518.2 |
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