Pregenerated sensors for PEX11G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069633Ensembl transcript IDs: ENSMUST00000004686.13, ENSMUST00000111081.10
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGTCTGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTaGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: KVWGLEMWWFSVEEH*VLFDMAWVCLPWWL Trigger: GAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| 3UTR CCA 90 bp | GAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTaGCTCCAAATCATGTTAACTCCAGTTCTAGGGGACCCAACCTCC | + |
|
Preference number: 1 (lower is better) Translates to: EHWVLFDMAWVCLPW*LQIMLTPVLGDPTS Trigger: GGAGGTTGGGTCCCCTAGAACTGGAGTTAACATGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 90 bp | GAAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATaGTGGCTCCAAATCATGTTAACTCCAGTTCTAGGGGACCCAACC | + |
|
Preference number: 1 (lower is better) Translates to: EEHWVLFDMAWVCLP*WLQIMLTPVLGDPT Trigger: GGTTGGGTCCCCTAGAACTGGAGTTAACATGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR TCA 90 bp | ATTTTAATAGACATTCCTATATTCCAGCTTTGCCGAAGCCCGACCTaGGGCATGTGTCTCTCCCACTCACCTTTAGGCAAGCCAGCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: ILIDIPIFQLCRSPT*GMCLSHSPLGKPAG Trigger: ACCTGCTGGCTTGCCTAAAGGTGAGTGGGAGAGACACATGCCTCAGGTCGGGCTTCGGCAAAGCTGGAATATAGGAATGTCTATTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 90 bp | CTGCACAGCTCGGGTGGGCTGCCTTTTCTAGAAGTATCTGTCCTTTaGTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LHSSGGLPFLEVSVL*FHVCTIHCSCQSLP Trigger: AGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAACCAAAGGACAGATACTTCTAGAAAAGGCAGCCCACCCGAGCTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 90 bp | GGTGGGCTGCCTTTTCTAGAAGTATCTGTCCTTTGGTTCCATGTCTaGACCATACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: GGLPFLEVSVLWFHV*TIHCSCQSLPVQGL Trigger: CAAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAACCAAAGGACAGATACTTCTAGAAAAGGCAGCCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 90 bp | GGAGAAAGGGAAAGAAAAGACATTGCTGTACTTAGGAAGGAGCCTTaGCTGTGCAGCAGGACTGTCTCAAGACAAACACAAAAGGTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: GERERKDIAVLRKEP*LCSRTVSRQTQKVG Trigger: TCCAACCTTTTGTGTTTGTCTTGAGACAGTCCTGCTGCACAGGCAAGGCTCCTTCCTAAGTACAGCAATGTCTTTTCTTTCCCTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 90 bp | AGGGAAAGAAAAGACATTGCTGTACTTAGGAAGGAGCCTTGCCTGTaGAGCAGGACTGTCTCAAGACAAACACAAAAGGTTGGATCATAT | + |
|
Preference number: 1 (lower is better) Translates to: RERKDIAVLRKEPCL*SRTVSRQTQKVGSY Trigger: ATATGATCCAACCTTTTGTGTTTGTCTTGAGACAGTCCTGCTGCACAGGCAAGGCTCCTTCCTAAGTACAGCAATGTCTTTTCTTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTGGCCAACACCAGAAGGGGAGAGGGCCAGAGGGCATTGTATCTTGACAGTGCCCCTTTCCCACCCTaGCCAGGGGCCAGCACCGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLANTRRGEGQRALYLDSAPFPP*PGASTG Trigger: TCCGGTGCTGGCCCCTGGGCAGGGTGGGAAAGGGGC...ACTGTCAAGATACAATGCCCTCTGGCCCTCTCCCCTTCTGGTGTTGGCCAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTGGCCAACACCAGAAGGGGAGAGGGCCAGAGGGCATTGTATCTTGACAGTCACTGTCTCCTAGGCTaGGCTCAGAGTCTCGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TLANTRRGEGQRALYLDSHCLLG*AQSLAD Trigger: GTCTGCGAGACTCTGAGCCCAGCCTAGGAGACAGTG...ACTGTCAAGATACAATGCCCTCTGGCCCTCTCCCCTTCTGGTGTTGGCCAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTGGCCAACACCAGAAGGGGAGAGGGCCAGAGGGCATTGTATCTTGACAGTTGCACCAGTGGCCAGTaGTTCCCACTCTGGGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: TLANTRRGEGQRALYLDSCTSGQ*FPLWES Trigger: AGATTCCCAGAGTGGGAATCACTGGCCACTGGTGCA...ACTGTCAAGATACAATGCCCTCTGGCCCTCTCCCCTTCTGGTGTTGGCCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTTGAAAGCAGCTTCCCCTaGAACCCTGGCTGGGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VPCLHHTLFMSKSSCARLESSFP*NPGWGL Trigger: CAGGCCCCAGCCAGGGTTTCAGGGGAAGCTGCTTTC...AAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATCATATAAAGTTCAAGGGCCACTGTCTCCTAGGCTGGGCTCAGAGTCTCCTTCCCCTGAAACCCTaGCTGGGGCCTGAGAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: LDHIKFKGHCLLGWAQSLLPLKP*LGPEKI Trigger: GATCTTCTCAGGCCCCAGCCAGGGTTTCAGGGGAAG...GAGACTCTGAGCCCAGCCTAGGAGACAGTGGCCCTTGAACTTTATATGATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 90 bp | GGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTaGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCAAATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: GWRCGGSVLKSTGYS*TWPGFVSHGGSKSC Trigger: ACATGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTTGTCCTCCTGGGACTTTaGAAACCTTGCCCTTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VPCLHHTLFMSKSSCARLVLLGL*KPCPWL Trigger: GAGCCAAGGGCAAGGTTTGCAAAGTCCCAGGAGGAC...AAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 90 bp | ACTGCACAGCTCGGGTGGGCTGCCTTTTCTAGAAGTATCTGTCCTTaGGTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TAQLGWAAFSRSICP*VPCLHHTLFMSKSS Trigger: GGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAACCAAAGGACAGATACTTCTAGAAAAGGCAGCCCACCCGAGCTGTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 90 bp | ATTTTATGTTTAAGGTCTGGGGGCTGGAGATGTGGTGGTTCAGTGTaGAAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ILCLRSGGWRCGGSV*KSTGYSLTWPGFVS Trigger: GGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGACCTTAAACATAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| 3UTR-3UTR GCA 90 bp | ACATTGCTGTACTTAGGAAGGAGCCTTGCCTGTGCAGCAGGACTGTCTCAAGACAGAGTCTCGCAGACATaGTTAGCTTTCAGATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TLLYLGRSLACAAGLSQDRVSQT*LAFRSK Trigger: TTTTGATCTGAAAGCTAAGCATGTCTGCGAGACTCT...GTCTTGAGACAGTCCTGCTGCACAGGCAAGGCTCCTTCCTAAGTACAGCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR CCA 90 bp | CCTTGTCTCAAACACAGAAAAATAAGCTGTAATGGGGACTGGAGCTCAACTGATCTAGCAGTGTCCTCCTaGGACTTTGCAAACCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PCLKHRKISCNGDWSSTDLAVSS*DFANLA Trigger: GGCAAGGTTTGCAAAGTCCCAGGAGGACACTGCTAG...ATCAGTTGAGCTCCAGTCCCCATTACAGCTTATTTTTCTGTGTTTGAGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAAGTTTCACGCGTCCTTGACTACATAGTAAATTCAAGGCAACCTAACCAAGAGGGAAGGCCAGAGTaGGACTGCTCTAATCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: KEVSRVLDYIVNSRQPNQEGRPE*DCSNHL Trigger: GAGGTGATTAGAGCAGTCTCACTCTGGCCTTCCCTC...TTGGTTAGGTTGCCTTGAATTTACTATGTAGTCAAGGACGCGTGAAACTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR GCA 90 bp | AGTATCTGTCCTTTGGTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTGCTCTAATCACCTCATaGACACACTGGCACCATACC | + |
|
Preference number: 2 (lower is better) Translates to: SICPLVPCLHHTLFMSKSALITS*THWHHT Trigger: GGTATGGTGCCAGTGTGTGCATGAGGTGATTAGAGC...AGACTTTGACATGAACAGTGTATGGTGCAGACATGGAACCAAAGGACAGATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | AATGCTTTGCTGGGGTCCTCTAACCCTCCACCCCAGTaGGTCCAGCATCCCGGTGGCCCACAAACACCTATC | + |
|
Preference number: 3 (lower is better) Translates to: NALLGSSNPPPQ*VQHPGGPQTPI Trigger: GATAGGTGTTTGTGGGCCACCGGGATGCTGGACCCACTGGGGTGGAGGGTTAGAGGACCCCAGCAAAGCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR TCA 72 bp | AGAGTTCGAGCAGGTGGGACCACCAGAGATAGGAGCTaGTCCTGGCCTACTCATGAGCTCTGCACAGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RVRAGGTTRDRS*SWPTHELCTGA Trigger: GGCACCTGTGCAGAGCTCATGAGTAGGCCAGGATCAGCTCCTATCTCTGGTGGTCCCACCTGCTCGAACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR TCA 72 bp | TGGAGCTCAACTGATGGAGGACTTGGCTGGTACACATaGGATCTTAGAACCACTGCACAGCTCGGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WSSTDGGLGWYT*DLRTTAQLGWA Trigger: AGCCCACCCGAGCTGTGCAGTGGTTCTAAGATCTCATGTGTACCAGCCAAGTCCTCCATCAGTTGAGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | AATCCATCTACACATCTTCAGAGAGGCCGACAACCATaGCCTGGCCCCAGCTTAAATGGGAACACTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NPSTHLQRGRQP*PGPSLNGNTAA Trigger: GGCTGCAGTGTTCCCATTTAAGCTGGGGCCAGGCCATGGTTGTCGGCCTCTCTGAAGATGTGTAGATGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR TCA 72 bp | GACATTCCTATATTCCAGCTTTGCCGAAGCCCGACCTaGGGCATGTGTCTCTCCCACTCACCTTTAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DIPIFQLCRSPT*GMCLSHSPLGK Trigger: CTTGCCTAAAGGTGAGTGGGAGAGACACATGCCTCAGGTCGGGCTTCGGCAAAGCTGGAATATAGGAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | TACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTTaGACCTCAAGCTCAGCCTGTCTTCCTGGCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YTVHVKVFLCKA*TSSSACLPGTL Trigger: CAGGGTGCCAGGAAGACAGGCTGAGCTTGAGGTCCAAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATCATATAAAGTTCAAGGGCCACTGTCTCCTAGGCTGGGCTCAGAGTCTCGGGACTTTGCAAACCTaGCCCTTGGCTCTGAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LDHIKFKGHCLLGWAQSLGTLQT*PLALRV Trigger: GACTCTCAGAGCCAAGGGCAAGGTTTGCAAAGTCCC...GAGACTCTGAGCCCAGCCTAGGAGACAGTGGCCCTTGAACTTTATATGATCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | GGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACATaGCCTGGGTTTGTCTCCCATGGTGGCTCCAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSVLKSTGYSLT*PGFVSHGGSKS Trigger: TGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 72 bp | TCTGCACCATACACTGTTCATGTCAAAGTCTTCCTGTaGAAGGCTTGGACCTCAAGCTCAGCCTGTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SAPYTVHVKVFL*KAWTSSSACLP Trigger: AGGAAGACAGGCTGAGCTTGAGGTCCAAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | GATCATATAAAGTTCAAGGGCCACTGTCTCCTAGGCTaGGCTCAGAGTCTCGCAGACATGCTTAGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DHIKFKGHCLLG*AQSLADMLSFQ Trigger: CTGAAAGCTAAGCATGTCTGCGAGACTCTGAGCCCAGCCTAGGAGACAGTGGCCCTTGAACTTTATATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | GTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTaGCTCCAAATCATGTTAACTCCAGTTCTAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLFDMAWVCLPW*LQIMLTPVLGD Trigger: GTCCCCTAGAACTGGAGTTAACATGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | TGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATaGTGGCTCCAAATCATGTTAACTCCAGTTCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WVLFDMAWVCLP*WLQIMLTPVLG Trigger: CCCTAGAACTGGAGTTAACATGATTTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR-3UTR CAA 90 bp | ACATTGCTGTACTTAGGAAGGAGCCTTGCCTGTGCAGCAGGACTGTCTCAAGACTCTACCATGGTCTCTTaGATAGAGGACACAAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLLYLGRSLACAAGLSQDSTMVS*IEDTNP Trigger: TGGATTTGTGTCCTCTATCAAAGAGACCATGGTAGA...GTCTTGAGACAGTCCTGCTGCACAGGCAAGGCTCCTTCCTAAGTACAGCAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 72 bp | TCTAGGACGTGGATGGTGAGAGCCGTGACACACACGTaGACACACACACACACAAATGTAATAAACACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRTWMVRAVTHT*THTHTNVINTQ Trigger: TTGAGTGTTTATTACATTTGTGTGTGTGTGTGTGCACGTGTGTGTCACGGCTCTCACCATCCACGTCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | TGTCTCAAACACAGAAAAATAAGCTGTAATGGGGACTaGAGCTCAACTGATGGAGGACTTGGCTGGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: CLKHRKISCNGD*SSTDGGLGWYT Trigger: TGTGTACCAGCCAAGTCCTCCATCAGTTGAGCTCCAGTCCCCATTACAGCTTATTTTTCTGTGTTTGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CCA 72 bp | TATTTTATGTTTAAGGTCTGGGGGCTGGAGATGTGGTaGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YFMFKVWGLEMW*FSVEEHWVLFD Trigger: GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGACCTTAAACATAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAGTTTCACGCGTCCTTGACTACATAGTAAATTCAAGGCAACCTAACCAACAACTGATGGAGGACTaGGCTGGTACACATGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: KEVSRVLDYIVNSRQPNQQLMED*AGTHEI Trigger: GATCTCATGTGTACCAGCCAAGTCCTCCATCAGTTG...TTGGTTAGGTTGCCTTGAATTTACTATGTAGTCAAGGACGCGTGAAACTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR GCA 72 bp | CCTTTTCTAGAAGTATCTGTCCTTTGGTTCCATGTCTaGACCATACACTGTTCATGTCAAAGTCTTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLEVSVLWFHV*TIHCSCQSLPV Trigger: CACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAACCAAAGGACAGATACTTCTAGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCCGGTCCCGGACCCGGTaGGACTCCAGCGCGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGYSLTWPGFVSHGGSRSRTR*DSSAEA Trigger: GGCTTCCGCGCTGGAGTCCCACCGGGTCCGGGACCG...GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CCA 90 bp | GAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCAACGGTCCCGGACCCGGTaGGACTCCAGCGCGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EHWVLFDMAWVCLPWWLQRSRTR*DSSAEA Trigger: GGCTTCCGCGCTGGAGTCCCACCGGGTCCGGGACCG...TTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCGCTGGCTTGCAGAGGTaGCTGTGGGGCTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGYSLTWPGFVSHGGSAGLQR*LWGSAA Trigger: AGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGC...GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCCCTGGGCAGCTGGCTTaGAGAGGTGCCTGTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGYSLTWPGFVSHGGSPGQLA*RGACGA Trigger: AGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGG...GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CCA 90 bp | GACTTTGCAAACCTTGCCCTTGGCTCTGAGAGTCCTGAAGTTCTCATGTGCCCCCCACCCGGAGGACCTTaGCATCGGCAGCCCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DFANLALGSESPEVLMCPPPGGP*HRQPRR Trigger: TCGCCTGGGCTGCCGATGCCAAGGTCCTCCGGGTGG...GGGGCACATGAGAACTTCAGGACTCTCAGAGCCAAGGGCAAGGTTTGCAAAGTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACCCACCCGGAGGACCTTaGCATCGGCAGCCCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WGLEMWWFSVEEHWVLFDPPGGP*HRQPRR Trigger: TCGCCTGGGCTGCCGATGCCAAGGTCCTCCGGGTGG...GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACGCTGGCTTGCAGAGGTaGCTGTGGGGCTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGLEMWWFSVEEHWVLFDAGLQR*LWGSAA Trigger: AGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGC...GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTCCATGGCCCTCCGCTTaGTCCTGGGCAGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGLEMWWFSVEEHWVLFPWPSA*SWAAGL Trigger: CAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGG...AAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CCA 90 bp | GGGGAACAGATACCAGGACTCCTACCTGATGGTCTTAAGAGTTCGAGCAGGTGGTTGCTCCTGGGCAGCTaGCTTGCAGAGGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEQIPGLLPDGLKSSSRWLLLGS*LAEVPV Trigger: CACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAA...CCACCTGCTCGAACTCTTAAGACCATCAGGTAGGAGTCCTGGTATCTGTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CCA 90 bp | GAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCAAATATCCTTGCCTCCATaGCCCTCCGCTTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHWVLFDMAWVCLPWWLQISLPP*PSACSW Trigger: CCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATAT...TTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCCCAGTGCACAGCATTTaGCAGGTCAGCCAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGYSLTWPGFVSHGGSPVHSI*QVSQVA Trigger: AGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGG...GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACCCAGTGCACAGCATTTaGCAGGTCAGCCAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGLEMWWFSVEEHWVLFDPVHSI*QVSQVA Trigger: AGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGG...GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| 3UTR CAA 72 bp | TGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTaGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGGSVLKSTGYS*TWPGFVSHGGS Trigger: GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACTTGTCCACAGGGCCTTaGCAGCTCCAAGAAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGLEMWWFSVEEHWVLFDLSTGP*QLQEVE Trigger: CTCTACTTCTTGGAGCTGTCAAGGCCCTGTGGACAA...GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCGGTCAGCCAGGTTGCTaGGTAGAGTTAAAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSTGYSLTWPGFVSHGGSGQPGC*VELKPL Trigger: CAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACC...GGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CCA 90 bp | TTGGATCATATAAAGTTCAAGGGCCACTGTCTCCTAGGCTGGGCTCAGAGTCTCCCAGCCCTGACAGCTTaGCATGTGCTGAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDHIKFKGHCLLGWAQSLPALTA*HVLRME Trigger: CTCCATCCTCAGCACATGCCAAGCTGTCAGGGCTGG...GAGACTCTGAGCCCAGCCTAGGAGACAGTGGCCCTTGAACTTTATATGATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 72 bp | TTGGCCAACACCAGAAGGGGAGAGGGCCAGAGGGCATaGTATCTTGACAGTAGAGCACACAAGTCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LANTRRGEGQRA*YLDSRAHKSSI Trigger: GATGGATGACTTGTGTGCTCTACTGTCAAGATACAATGCCCTCTGGCCCTCTCCCCTTCTGGTGTTGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTCATGGGCTCAGTCTTTAGGTGGGGAACAGATACCAGGACTCCTACCTGGTCAGCCAGGTTGCTaGGTAGAGTTAAAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RASWAQSLGGEQIPGLLPGQPGC*VELKPL Trigger: CAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACC...AGGTAGGAGTCCTGGTATCTGTTCCCCACCTAAAGACTGAGCCCATGAGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR GCA 90 bp | TGCCTGTGCAGCAGGACTGTCTCAAGACAAACACAAAAGGTTGGATCATATAAACCATGGCCCTCCGCTTaGTCCTGGGCAGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCSRTVSRQTQKVGSYKPWPSA*SWAAGL Trigger: CAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGG...TTTATATGATCCAACCTTTTGTGTTTGTCTTGAGACAGTCCTGCTGCACAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 72 bp | ACACCAGAAGGGGAGAGGGCCAGAGGGCATTGTATCTaGACAGTAGAGCACACAAGTCATCCATCCCTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPEGERARGHCI*TVEHTSHPSLV Trigger: TACTAGGGATGGATGACTTGTGTGCTCTACTGTCAAGATACAATGCCCTCTGGCCCTCTCCCCTTCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 72 bp | ATACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTaGGACCTCAAGCTCAGCCTGTCTTCCTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHCSCQSLPVQG*DLKLSLSSWHP Trigger: AGGGTGCCAGGAAGACAGGCTGAGCTTGAGGTCCAAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR TCA 90 bp | GTTCCATGTCTGCACCATACACTGTTCATGTCAAAGTCTTCCTGTGCAAGGCTTTTGTCCACAGGGCCTTaGCAGCTCCAAGAAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPCLHHTLFMSKSSCARLLSTGP*QLQEVE Trigger: CTCTACTTCTTGGAGCTGTCAAGGCCCTGTGGACAA...AAGCCTTGCACAGGAAGACTTTGACATGAACAGTGTATGGTGCAGACATGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CCA 90 bp | ACACTGGCACCATACCAAGAGATTTTAATAGACATTCCTATATTCCAGCTTTGCATATCCTTGCCTCCATaGCCCTCCGCTTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLAPYQEILIDIPIFQLCISLPP*PSACSW Trigger: CCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATAT...GCAAAGCTGGAATATAGGAATGTCTATTAAAATCTCTTGGTATGGTGCCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| 3UTR CAA 72 bp | TGTGCAGCAGGACTGTCTCAAGACAAACACAAAAGGTaGGATCATATAAAGTTCAAGGGCCACTGTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CAAGLSQDKHKR*DHIKFKGHCLL Trigger: TAGGAGACAGTGGCCCTTGAACTTTATATGATCCAACCTTTTGTGTTTGTCTTGAGACAGTCCTGCTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS CCA 90 bp | GAGCATATCCTTGCCTCCATGGCCCTCCGCTTGCTCCTGGGCAGCTaGCTTGCAGAGGTGCCTGTGGGGCTCCGCAGCTTCTGTCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EHILASMALRLLLGS*LAEVPVGLRSFCLS Trigger: GCTTAGACAGAAGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CCA 90 bp | AAACCTCTGAGCATATCCTTGCCTCCATGGCCCTCCGCTTGCTCCTaGGCAGCTGGCTTGCAGAGGTGCCTGTGGGGCTCCGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KPLSISLPPWPSACS*AAGLQRCLWGSAAS Trigger: AGAAGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS GCA 90 bp | GAGTTAAAACCTCTGAGCATATCCTTGCCTCCATGGCCCTCCGCTTaGTCCTGGGCAGCTGGCTTGCAGAGGTGCCTGTGGGGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELKPLSISLPPWPSA*SWAAGLQRCLWGSA Trigger: TGCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGGTTTTAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CCA 90 bp | ACTGGGCTGACACCACCAGCAAGCGCCTTCCCACTTCGGACCTGTTaGGGCATTGTTCCACTAGGACCCCACCGATCAGCTGGCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGLTPPASAFPLRTC*GIVPLGPHRSAGSN Trigger: ATTGCTGCCAGCTGATCGGTGGGGTCCTAGTGGAACAATGCCCCAACAGGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | GAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCAATCCATGGCCCTCCGCTaGCTCCTGGGCAGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EHWVLFDMAWVCLPWWLQSMALR*LLGSWL Trigger: AAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGA...TTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTTCCATGGCCCTCCGCTaGCTCCTGGGCAGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VWGLEMWWFSVEEHWVLFSMALR*LLGSWL Trigger: AAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGA...AAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS TCA 90 bp | AGTACAGTTGGTCAGTCACATTACTCAGGACAGACAGCCATCGGATaGAGATGTCCTCCTCCAGGCGGTCCCGGACCCGGTGGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: STVGQSHYSGQTAIG*RCPPPGGPGPGGTP Trigger: TGGAGTCCCACCGGGTCCGGGACCGCCTGGAGGAGGACATCTTCATCCGATGGCTGTCTGTCCTGAGTAATGTGACTGACCAACTGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACACCTCTGAGCATATCCTaGCCTCCATGGCCCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRCGGSVLKSTGYSLTPLSIS*PPWPSA Trigger: AGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGG...TGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACAGCCAGCCCTGACAGCTaGGCATGTGCTGAGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGWRCGGSVLKSTGYSLTASPDS*ACAEDG Trigger: TCCATCCTCAGCACATGCCAAGCTGTCAGGGCTGGC...TGTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS TCA 90 bp | CTCGGGGCAACCAGTGCACAGCATTTGCCAGGTCAGCCAGGTTGCTaGGTAGAGTTAAAACCTCTGAGCATATCCTTGCCTCCATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGATSAQHLPGQPGC*VELKPLSISLPPWP Trigger: GGGCCATGGAGGCAAGGATATGCTCAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGGTTGCCCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | GTGACCAACAGTTTCCCTCTGAGAACCACAGGAAGTGCAGAGCGTGATCCTAGTCCTCTGAGCATATCCTaGCCTCCATGGCCCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTNSFPLRTTGSAERDPSPLSIS*PPWPSA Trigger: AGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGG...ACTAGGATCACGCTCTGCACTTCCTGTGGTTCTCAGAGGGAAACTGTTGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS TCA 90 bp | GTCATCAAAGAGTCTCAAGACAGTCCTGCAATGATTGAACTGGGCTaGCACCACCAGCAAGCGCCTTCCCACTTCGGACCTGTTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VIKESQDSPAMIELG*HHQQAPSHFGPVGA Trigger: TGCCCCAACAGGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS TCA 90 bp | ACATGGCCAGGTCATCAAAGAGTCTCAAGACAGTCCTGCAATGATTaGACTGGGCTGACACCACCAGCAAGCGCCTTCCCACTTCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TWPGHQRVSRQSCND*TGLTPPASAFPLRT Trigger: GGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACCTGGCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | GAGCACTGGGTACTCTTTGACATGGCCTGGGTTTGTCTCCCATGGTGGCTCCAAATTGTCCACAGGGCCTaGACAGCTCCAAGAAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: EHWVLFDMAWVCLPWWLQIVHRA*TAPRSR Trigger: TCTACTTCTTGGAGCTGTCAAGGCCCTGTGGACAAT...TTGGAGCCACCATGGGAGACAAACCCAGGCCATGTCAAAGAGTACCCAGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | CCTTGTCTCAAACACAGAAAAATAAGCTGTAATGGGGACTGGAGCTCAACTGATTCCTGGGCAGCTGGCTaGCAGAGGTGCCTGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCLKHRKISCNGDWSSTDSWAAG*QRCLWG Trigger: GCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGA...ATCAGTTGAGCTCCAGTCCCCATTACAGCTTATTTTTCTGTGTTTGAGACAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGACGCCAGGTCAGCCAGGTaGCTGAGTAGAGTTAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WGLEMWWFSVEEHWVLFDARSAR*LSRVKT Trigger: GGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGC...GTCAAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGGCTGGAGATGTGGTGGTTCAGTGTTGAAGAGCACTGGGTACTCTTTGCCAGGTCAGCCAGGTaGCTGAGTAGAGTTAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VWGLEMWWFSVEEHWVLFARSAR*LSRVKT Trigger: GGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGC...AAAGAGTACCCAGTGCTCTTCAACACTGAACCACCACATCTCCAGCCCCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS TCA 90 bp | ACAAACATGGCCAGGTCATCAAAGAGTCTCAAGACAGTCCTGCAATaGTTGAACTGGGCTGACACCACCAGCAAGCGCCTTCCCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TNMARSSKSLKTVLQ*LNWADTTSKRLPTS Trigger: CGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACCTGGCCATGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | TTGGATCATATAAAGTTCAAGGGCCACTGTCTCCTAGGCTGGGCTCAGAGTCTCATTGTCCACAGGGCCTaGACAGCTCCAAGAAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LDHIKFKGHCLLGWAQSLIVHRA*TAPRSR Trigger: TCTACTTCTTGGAGCTGTCAAGGCCCTGTGGACAAT...GAGACTCTGAGCCCAGCCTAGGAGACAGTGGCCCTTGAACTTTATATGATCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTGCAGCAGGACTGTCTCAAGACAAACACAAAAGGTTGGATCATATAAACCCACTTCGGACCTGTaGGGGCATTGTTCCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLCSRTVSRQTQKVGSYKPTSDL*GHCSTR Trigger: CCTAGTGGAACAATGCCCCAACAGGTCCGAAGTGGG...TTTATATGATCCAACCTTTTGTGTTTGTCTTGAGACAGTCCTGCTGCACAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGTTTCACGCGTCCTTGACTACATAGTAAATTCAAGGCAACCTAACCAAAGATGTCCTCCTCCTTaGTTCCCAGGCCATACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEVSRVLDYIVNSRQPNQRCPPP*FPGHTA Trigger: AGCAGTATGGCCTGGGAACAAAGGAGGAGGACATCT...TTGGTTAGGTTGCCTTGAATTTACTATGTAGTCAAGGACGCGTGAAACTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS CCA 72 bp | CTTGCCTCCATGGCCCTCCGCTTGCTCCTGGGCAGCTaGCTTGCAGAGGTGCCTGTGGGGCTCCGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LASMALRLLLGS*LAEVPVGLRSF Trigger: GAAGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CAA 72 bp | CCTCCATGGCCCTCCGCTTGCTCCTGGGCAGCTGGCTaGCAGAGGTGCCTGTGGGGCTCCGCAGCTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPWPSACSWAAG*QRCLWGSAASV Trigger: GACAGAAGCTGCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CCA 72 bp | AGCATATCCTTGCCTCCATGGCCCTCCGCTTGCTCCTaGGCAGCTGGCTTGCAGAGGTGCCTGTGGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SISLPPWPSACS*AAGLQRCLWGS Trigger: GGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CCA 72 bp | ATGAAGATGTCCTCCTCCAGGCGGTCCCGGACCCGGTaGGACTCCAGCGCGGAAGCCAGACGGTTCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MKMSSSRRSRTR*DSSAEARRFSR Trigger: TCTGCTGAACCGTCTGGCTTCCGCGCTGGAGTCCCACCGGGTCCGGGACCGCCTGGAGGAGGACATCTTCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111081.10 |
||
| CDS CAA 90 bp | AGAGTTAAAACCTCTGAGCATATCCTTGCCTCCATGGCCCTCCGCTaGCTCCTGGGCAGCTGGCTTGCAGAGGTGCCTGTGGGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVKTSEHILASMALR*LLGSWLAEVPVGLR Trigger: GCGGAGCCCCACAGGCACCTCTGCAAGCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGGTTTTAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CCA 72 bp | GTGTCCACCACCAAGCAGAGTCCACCCGGAGGACCTTaGCATCGGCAGCCCAGGCGATATGCTCACAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSTTKQSPPGGP*HRQPRRYAHKD Trigger: ATCCTTGTGAGCATATCGCCTGGGCTGCCGATGCCAAGGTCCTCCGGGTGGACTCTGCTTGGTGGTGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CAA 72 bp | AGTGTCCACCACCAAGCAGAGTCCACCCGGAGGACCTaGGCATCGGCAGCCCAGGCGATATGCTCACAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVHHQAESTRRT*ASAAQAICSQG Trigger: TCCTTGTGAGCATATCGCCTGGGCTGCCGATGCCAAGGTCCTCCGGGTGGACTCTGCTTGGTGGTGGACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS TCA 72 bp | GGTCAGTCACATTACTCAGGACAGACAGCCATCGGATaGAGATGTCCTCCTCCAGGCGGTCCCGGACCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GQSHYSGQTAIG*RCPPPGGPGPG Trigger: ACCGGGTCCGGGACCGCCTGGAGGAGGACATCTTCATCCGATGGCTGTCTGTCCTGAGTAATGTGACTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111081.10 |
||
| CDS CCA 72 bp | ACACCACCAGCAAGCGCCTTCCCACTTCGGACCTGTTaGGGCATTGTTCCACTAGGACCCCACCGATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPPASAFPLRTC*GIVPLGPHRSA Trigger: AGCTGATCGGTGGGGTCCTAGTGGAACAATGCCCCAACAGGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS CAA 90 bp | GGGCTCCGCAGCTTCTGTCTAAGCTTCAGCATTGTCCACAGGGCCTaGACAGCTCCAAGAAGTAGAGAGAGAGTCCAGAGGGCTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLRSFCLSFSIVHRA*TAPRSRERVQRAVF Trigger: GAACACAGCCCTCTGGACTCTCTCTCTACTTCTTGGAGCTGTCAAGGCCCTGTGGACAATGCTGAAGCTTAGACAGAAGCTGCGGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS TCA 72 bp | GAGTCTCAAGACAGTCCTGCAATGATTGAACTGGGCTaGCACCACCAGCAAGCGCCTTCCCACTTCGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: ESQDSPAMIELG*HHQQAPSHFGP Trigger: AGGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS CAA 90 bp | ACACCTCGGGGCAACCAGTGCACAGCATTTGCCAGGTCAGCCAGGTaGCTGAGTAGAGTTAAAACCTCTGAGCATATCCTTGCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: TPRGNQCTAFARSAR*LSRVKTSEHILASM Trigger: CATGGAGGCAAGGATATGCTCAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGGTTGCCCCGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS TCA 72 bp | GGTCATCAAAGAGTCTCAAGACAGTCCTGCAATGATTaGACTGGGCTGACACCACCAGCAAGCGCCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHQRVSRQSCND*TGLTPPASAFP Trigger: TGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS TCA 72 bp | GCCAGGTCATCAAAGAGTCTCAAGACAGTCCTGCAATaGTTGAACTGGGCTGACACCACCAGCAAGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ARSSKSLKTVLQ*LNWADTTSKRL Trigger: AAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004686.13 |
||
| CDS TCA 72 bp | ACCAGTGCACAGCATTTGCCAGGTCAGCCAGGTTGCTaGGTAGAGTTAAAACCTCTGAGCATATCCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSAQHLPGQPGC*VELKPLSISLP Trigger: AGGCAAGGATATGCTCAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||
| CDS CAA 72 bp | GGCAACCAGTGCACAGCATTTGCCAGGTCAGCCAGGTaGCTGAGTAGAGTTAAAACCTCTGAGCATATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GNQCTAFARSAR*LSRVKTSEHIL Trigger: AAGGATATGCTCAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004686.13 ENSMUST00000111081.10 |
||