Pregenerated sensors for PEX11B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028102Ensembl transcript IDs: ENSMUST00000048766.15, ENSMUST00000118557.8, ENSMUST00000156015.2, ENSMUST00000165842.3
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAACTGCAGAGGCCTGCAGGAGCCTTCCCTTAGCACTGCCTTCCTaGCCCGTCTTTGGCAGGTTCTTCCCCTCATCCCTAAGGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: PTAEACRSLPLALPS*PVFGRFFPSSLRIW Trigger: CCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAAGGGAAGGCTCCTGCAGGCCTCTGCAGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR TCA 90 bp | AAAAGGTCACAGGCATTTCTGAGCACATCCAGCAAGAGAGGGGGATaGCCTCGAAGGACACGAGCCAGTAGCAGGATTCGGAGCCGAAAC | + |
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Preference number: 1 (lower is better) Translates to: KRSQAFLSTSSKRGG*PRRTRASSRIRSRN Trigger: GTTTCGGCTCCGAATCCTGCTACTGGCTCGTGTCCTTCGAGGTCATCCCCCTCTCTTGCTGGATGTGCTCAGAAATGCCTGTGACCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR CCA 90 bp | GGCCTGCAGGAGCCTTCCCTTAGCACTGCCTTCCTGACCCGTCTTTaGCAGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTAACTTC | + |
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Preference number: 1 (lower is better) Translates to: GLQEPSLSTAFLTRL*QVLPLIPKDLDFNF Trigger: GAAGTTAAAATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAAGGGAAGGCTCCTGCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR TCA 90 bp | GCCCATAGGACATTGTCACAGGCAAAGTACAAGGCTCGGTTGAGGTaGCTGACAGTGATGCAGAATCTCAGAACGACATCTGACAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: AHRTLSQAKYKARLR*LTVMQNLRTTSDRC Trigger: GCACCTGTCAGATGTCGTTCTGAGATTCTGCATCACTGTCAGTCACCTCAACCGAGCCTTGTACTTTGCCTGTGACAATGTCCTATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR TCA 90 bp | AAGCCATCCACAGTCAGAGAGCTAAGGCTTACAATGACCAGACCATaGGAGACCAGATGTCAACGAGCAGCTGGACACAGTAACACTCAC | + |
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Preference number: 1 (lower is better) Translates to: KPSTVRELRLTMTRP*ETRCQRAAGHSNTH Trigger: GTGAGTGTTACTGTGTCCAGCTGCTCGTTGACATCTGGTCTCTCATGGTCTGGTCATTGTAAGCCTTAGCTCTCTGACTGTGGATGGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR CCA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTaGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTC | + |
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Preference number: 1 (lower is better) Translates to: SLYSIYRKRPDMASA*VVRERARAKCGRKL Trigger: GAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR TCA 90 bp | TTAACTTCAGTCAAGGAGTTGAATTACAATGAGGTTGGCACACAGTaGCCATCTCAGCTTCCATCTCACCCACCTGGGCTCCCTCCTTAT | + |
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Preference number: 1 (lower is better) Translates to: LTSVKELNYNEVGTQ*PSQLPSHPPGLPPY Trigger: ATAAGGAGGGAGCCCAGGTGGGTGAGATGGAAGCTGAGATGGTCACTGTGTGCCAACCTCATTGTAATTCAACTCCTTGACTGAAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR CCA 90 bp | CAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTaGGGAGTCACTGCCTGTAGACAGGTGTGCTTTGTGGTGTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: QSTELWSCLCVSNSF*GVTACRQVCFVVSR Trigger: TCTTGACACCACAAAGCACACCTGTCTACAGGCAGTGACTCCCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR TCA 90 bp | CCTAAGGATCTGGATTTTAACTTCAGTCAAGGAGTTGAATTACAATaGGGTTGGCACACAGTGACCATCTCAGCTTCCATCTCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: PKDLDFNFSQGVELQ*GWHTVTISASISPT Trigger: GGTGGGTGAGATGGAAGCTGAGATGGTCACTGTGTGCCAACCTCATTGTAATTCAACTCCTTGACTGAAGTTAAAATCCAGATCCTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGGAGGCAGTCTGCTaGGGCAGACCCAGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: EEARHGISLGSQRKSKSQVEAVC*GRPRGE Trigger: TTCTCCCCTGGGTCTGCCTCAGCAGACTGCCTCCAC...TTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTCAGAGCTTCAGCCCTGCCTAGGTACCACAGTGAAAACAGGCAATCCGCCAACTGCAGAGGCCTaGAGGAGCCTTCCCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSSELQPCLGTTVKTGNPPTAEA*RSLPLA Trigger: TGCTAAGGGAAGGCTCCTGCAGGCCTCTGCAGTTGG...CGGATTGCCTGTTTTCACTGTGGTACCTAGGCAGGGCTGAAGCTCTGAGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR CAA 90 bp | CCACACAGCCCCACAATCCCAGGGCCACAACGCCAGAGGCCTAGTTaGTCCAGTGGGATGAAAAGGTCACAGGCATTTCTGAGCACATCC | + |
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Preference number: 2 (lower is better) Translates to: PHSPTIPGPQRQRPS*SSGMKRSQAFLSTS Trigger: GGATGTGCTCAGAAATGCCTGTGACCTTTTCATCCCACTGGACAAACTAGGCCTCTGGCGTTGTGGCCCTGGGATTGTGGGGCTGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCGAAGAGACGCCGGGCATGAAATGAAGCCTGGGAAAGTATGGAGGGTGGGCAATGGGACTGAATaGAGCCCAACTGCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CERRDAGHEMKPGKVWRVGNGTE*SPTAEA Trigger: GGCCTCTGCAGTTGGGCTTCATTCAGTCCCATTGCC...CACCCTCCATACTTTCCCAGGCTTCATTTCATGCCCGGCGTCTCTTCGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTCAGAAGCCTAAAGCAGGGGAGCTCAGAGCTTCAGCCCTGCCTAGGTACGCCGGGCATGAAATaGAGCCTGGGAAAGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: RLLRSLKQGSSELQPCLGTPGMK*SLGKYG Trigger: TCCATACTTTCCCAGGCTTCATTTCATGCCCGGCGT...ACCTAGGCAGGGCTGAAGCTCTGAGCTCCCCTGCTTTAGGCTTCTGAGTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGGTCCCACAGTTTCTACTCCTCCTGAGACTCCTACTCCAGAAACCTTCTGTGCCCACTTTTCCTaGTCCACTCGGGGAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PPGPTVSTPPETPTPETFCAHFS*STRGAS Trigger: GCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACA...GAAGGTTTCTGGAGTAGGAGTCTCAGGAGGAGTAGAAACTGTGGGACCTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR CAA 90 bp | GTGATGCAGAATCTCAGAACGACATCTGACAGGTGCACAGCCCTTTaGGCTGACTCCAGGGCATCTGTTGAGTTCCCCAGGCGTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: VMQNLRTTSDRCTAL*ADSRASVEFPRRSN Trigger: GTTGCTACGCCTGGGGAACTCAACAGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCTGTCAGATGTCGTTCTGAGATTCTGCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCGTGGAGGCAGTCTGCTaGGGCAGACCCAGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLYSIYRKRPDMASAWVVVEAVC*GRPRGE Trigger: TTCTCCCCTGGGTCTGCCTCAGCAGACTGCCTCCAC...GACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCGGGGAGCTAGCCCAGACTTTCCAGCCCATAGGACATTGTCACAGGCAAAGTCCATCTCACCCACCTaGGCTCCCTCCTTATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TRGASPDFPAHRTLSQAKSISPT*APSLSC Trigger: ACAAGATAAGGAGGGAGCCCAGGTGGGTGAGATGGA...CTTTGCCTGTGACAATGTCCTATGGGCTGGAAAGTCTGGGCTAGCTCCCCGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR CAA 90 bp | CACCTGGGCTCCCTCCTTATCTTGTACCACAGTGTCAGTCAGGGCTaGAGTCGTAGCCAGGGACAGATTAGGGTGAGAATAGACAGAATG | + |
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Preference number: 2 (lower is better) Translates to: HLGSLLILYHSVSQG*SRSQGQIRVRIDRM Trigger: CATTCTGTCTATTCTCACCCTAATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAGGAGGGAGCCCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAATCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGACGCCGGGCATGAAATaGAGCCTGGGCTCCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: IESLYSIYRKRPDMASAWTPGMK*SLGSLL Trigger: AAGGAGGGAGCCCAGGCTTCATTTCATGCCCGGCGT...CCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGATTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048766.15 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTTCACGGATTGTTTTGAATTGGGACCATTATGGTGTGTCCGCACCTTTCTTAGCACTGCCTTCCTaGCCCGTCTTTGGCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GCSRIVLNWDHYGVSAPFLALPS*PVFGRF Trigger: GAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAA...GAAAGGTGCGGACACACCATAATGGTCCCAATTCAAAACAATCCGTGAACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCCAGGTCCCACAGTTTCTACTCCTCCTGAGACTCCTACTCCAGAAACCTTCGCCTGCTGTAAGCTaGAGTCTCTTGTTCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: VLQVPQFLLLLRLLLQKPSPAVS*SLLFHQ Trigger: TTGATGGAACAAGAGACTTCAGCTTACAGCAGGCGA...AGGTTTCTGGAGTAGGAGTCTCAGGAGGAGTAGAAACTGTGGGACCTGGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATCTTGTACCACAGTGTCAGTCAGGGCTTGAGTCGTAGCCAGGGACAGATTACAGAATGGAGGATATaGGGCCACACAGCCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: LILYHSVSQGLSRSQGQITEWRI*GHTAPQ Trigger: TTGTGGGGCTGTGTGGCCTCATATCCTCCATTCTGT...AATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATCTTGTACCACAGTGTCAGTCAGGGCTTGAGTCGTAGCCAGGGACAGATTACGACATCTGACAGGTaGACAGCCCTTTTGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LILYHSVSQGLSRSQGQITTSDR*TALLAD Trigger: GTCAGCCAAAAGGGCTGTGCACCTGTCAGATGTCGT...AATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGCTGTTCACGGATTGTTTTGAATTGGGACCATTATGGTGTGTCCGCACCTCCATCTCACCCACCTaGGCTCCCTCCTTATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LRLFTDCFELGPLWCVRTSISPT*APSLSC Trigger: ACAAGATAAGGAGGGAGCCCAGGTGGGTGAGATGGA...GGTGCGGACACACCATAATGGTCCCAATTCAAAACAATCCGTGAACAGCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCCTTCCCTTAGCACTGCCTTCCTGACCCGTCTTTGGCAGGTTCTTCCCTCATCCCTAAGGATCTaGATTTTAACTTCAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: QEPSLSTAFLTRLWQVLPSSLRI*ILTSVK Trigger: CTTGACTGAAGTTAAAATCCAGATCCTTAGGGATGA...GGGAAGAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAAGGGAAGGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTTTAGCACTGCCTTCCTaGCCCGTCTTTGGCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SQRKSKSQVRKETLISTCLALPS*PVFGRF Trigger: GAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAA...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTAAATATCTGGCCAGGAGGCTAAGAAAGAGAATTCTGTCTCACGGTAACGGCAATGGGACTGAATaGAGCCCAACTGCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PFKYLARRLRKRILSHGNGNGTE*SPTAEA Trigger: GGCCTCTGCAGTTGGGCTTCATTCAGTCCCATTGCC...GTTACCGTGAGACAGAATTCTCTTTCTTAGCCTCCTGGCCAGATATTTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACGTGGAGGCAGTCTGCTaGGGCAGACCCAGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLCGQGPVIYIESLYSIYVEAVC*GRPRGE Trigger: TTCTCCCCTGGGTCTGCCTCAGCAGACTGCCTCCAC...GTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTGGGTCAGAGCTTCAGCCCTaGCTAGGTACCACAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LANPLSYGHACVCLIAFGSELQP*LGTTVK Trigger: TTTCACTGTGGTACCTAGGCAGGGCTGAAGCTCTGA...CCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTGACATGGCATCAGCCTaGGTAGTCAGAGAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SQRKSKSQVRKETLISTCDMASA*VVRERA Trigger: TGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTC...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTAAATATCTGGCCAGGAGGCTAAGAAAGAGAATTCTGTCTCACGGTAACTCCATCTCACCCACCTaGGCTCCCTCCTTATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: PFKYLARRLRKRILSHGNSISPT*APSLSC Trigger: ACAAGATAAGGAGGGAGCCCAGGTGGGTGAGATGGA...GTTACCGTGAGACAGAATTCTCTTTCTTAGCCTCCTGGCCAGATATTTAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACCCAACTGCAGAGGCCTaGAGGAGCCTTCCCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLCGQGPVIYIESLYSIYPTAEA*RSLPLA Trigger: TGCTAAGGGAAGGCTCCTGCAGGCCTCTGCAGTTGG...GTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACAGGAAGAGACGCCGGGCATaGAATGAAGCCTGGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LCGQGPVIYIESLYSIYRKRRRA*NEAWES Trigger: ACTTTCCCAGGCTTCATTTCATGCCCGGCGTCTCTT...CCTGTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR CCA 90 bp | AAATATCTGGCCAGGAGGCTAAGAAAGAGAATTCTGTCTCACGGTAACAAATTCGACATGGCATCAGCCTaGGTAGTCAGAGAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: KYLARRLRKRILSHGNKFDMASA*VVRERA Trigger: TGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTC...GAATTTGTTACCGTGAGACAGAATTCTCTTTCTTAGCCTCCTGGCCAGATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTGGGGAGTTCACGGATTGTTTTaGATTGGGACCATTATGGTG | + |
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Preference number: 2 (lower is better) Translates to: CQSTELWSCLCVSNSFWGVHGLF*IGTIMV Trigger: CACCATAATGGTCCCAATTCAAAACAATCCGTGAAC...TCCCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTGGGGAGGAAAGTATGGAGGGTaGAAGGGAAGAAAAATGCTA | + |
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Preference number: 2 (lower is better) Translates to: CQSTELWSCLCVSNSFWGGKYGG*KGRKML Trigger: TAGCATTTTTCTTCCCTTCCACCCTCCATACTTTCC...TCCCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAATATCTGGCCAGGAGGCTAAGAAAGAGAATTCTGTCTCACGGTAACAAAGGAGTTGAATTACAATaGGGTTGGCACACAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: FKYLARRLRKRILSHGNKGVELQ*GWHTVT Trigger: GGTCACTGTGTGCCAACCTCATTGTAATTCAACTCC...TTTGTTACCGTGAGACAGAATTCTCTTTCTTAGCCTCCTGGCCAGATATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTGGGGGAAGGGAAGAAAAATaGTACATGAGGTTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LANPLSYGHACVCLIAFGGREEK*YMRFQK Trigger: TTTCTGAAACCTCATGTAGCATTTTTCTTCCCTTCC...CCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTGGCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTTCATCCCTAAGGATCTaGATTTTAACTTCAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SQRKSKSQVRKETLISTCSSLRI*ILTSVK Trigger: CTTGACTGAAGTTAAAATCCAGATCCTTAGGGATGA...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR TCA 72 bp | GAGGCCTGCAGGAGCCTTCCCTTAGCACTGCCTTCCTaGCCCGTCTTTGGCAGGTTCTTCCCCTCATCCCTA | + |
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Preference number: 3 (lower is better) Translates to: EACRSLPLALPS*PVFGRFFPSSL Trigger: TAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAAGGGAAGGCTCCTGCAGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| 3UTR-3UTR CAA 90 bp | AACGCTGTGCCCACTTTTCCTGGTCCACTCGGGGAGCTAGCCCAGACTTTCCAGACTCCAGGGCATCTGTaGAGTTCCCCAGGCGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: NAVPTFPGPLGELAQTFQTPGHL*SSPGVA Trigger: TGCTACGCCTGGGGAACTCAACAGATGCCCTGGAGT...CTGGAAAGTCTGGGCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACAGCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTACTCAGAAGCCTAAAGCAGGGGAGCTCAGAGCTTCAGCCCTGCCTAGGTCTTCCTGACCCGTCTTaGGCAGGTTCTTCCCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: RLLRSLKQGSSELQPCLGLPDPS*AGSSPH Trigger: ATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAG...ACCTAGGCAGGGCTGAAGCTCTGAGCTCCCCTGCTTTAGGCTTCTGAGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| 3UTR TCA 72 bp | CAGGCATTTCTGAGCACATCCAGCAAGAGAGGGGGATaGCCTCGAAGGACACGAGCCAGTAGCAGGATTCGG | + |
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Preference number: 3 (lower is better) Translates to: QAFLSTSSKRGG*PRRTRASSRIR Trigger: CCGAATCCTGCTACTGGCTCGTGTCCTTCGAGGTCATCCCCCTCTCTTGCTGGATGTGCTCAGAAATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| 3UTR TCA 72 bp | CCCTGGTCCTCCAGGTCCCACAGTTTCTACTCCTCCTaGGACTCCTACTCCAGAAACCTTCATTCGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PWSSRSHSFYSS*DSYSRNLHSPA Trigger: AGCAGGCGAATGAAGGTTTCTGGAGTAGGAGTCTCAGGAGGAGTAGAAACTGTGGGACCTGGAGGACCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR CCA 72 bp | GAGCCTTCCCTTAGCACTGCCTTCCTGACCCGTCTTTaGCAGGTTCTTCCCCTCATCCCTAAGGATCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EPSLSTAFLTRL*QVLPLIPKDLD Trigger: ATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAGGCAGTGCTAAGGGAAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR CCA 72 bp | ATCTCAGAACGACATCTGACAGGTGCACAGCCCTTTTaGCTGACTCCAGGGCATCTGTTGAGTTCCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISERHLTGAQPF*LTPGHLLSSPG Trigger: GCCTGGGGAACTCAACAGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCTGTCAGATGTCGTTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCCTTCCTGACCCGTCTTaGGCAGGTTCTTCCCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLYSIYRKRPDMASAWVVLPDPS*AGSSPH Trigger: ATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAAG...GACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR TCA 72 bp | GTCAAGGAGTTGAATTACAATGAGGTTGGCACACAGTaGCCATCTCAGCTTCCATCTCACCCACCTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VKELNYNEVGTQ*PSQLPSHPPGL Trigger: GAGCCCAGGTGGGTGAGATGGAAGCTGAGATGGTCACTGTGTGCCAACCTCATTGTAATTCAACTCCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR CCA 72 bp | AGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTaGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: SIYRKRPDMASA*VVRERARAKCG Trigger: TCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTATCTTGTACCACAGTGTCAGTCAGGGCTTGAGTCGTAGCCAGGGACAGATTAAACTTCAAAGCCAGTaGTGGCAGACTTCCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LILYHSVSQGLSRSQGQIKLQSQ*WQTSSW Trigger: CCAGGAGGAAGTCTGCCACAACTGGCTTTGAAGTTT...AATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR TCA 72 bp | ACAGTCAGAGAGCTAAGGCTTACAATGACCAGACCATaGGAGACCAGATGTCAACGAGCAGCTGGACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TVRELRLTMTRP*ETRCQRAAGHS Trigger: ACTGTGTCCAGCTGCTCGTTGACATCTGGTCTCTCATGGTCTGGTCATTGTAAGCCTTAGCTCTCTGACTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| 3UTR TCA 72 bp | CAGATTCATGATGAGGGAAAACAGATAGTATCTGAATaGACGCTGTGCCCACTTTTCCTGGTCCACTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QIHDEGKQIVSE*TLCPLFLVHSG Trigger: CCCCGAGTGGACCAGGAAAAGTGGGCACAGCGTTCATTCAGATACTATCTGTTTTCCCTCATCATGAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR GCA 72 bp | CTCCTGAGACTCCTACTCCAGAAACCTTCATTCGCCTaGTGTAAGCTGAAGTCTCTTGTTCCATCAATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLRLLLQKPSFA*CKLKSLVPSIG Trigger: GCCTATTGATGGAACAAGAGACTTCAGCTTACAGCAGGCGAATGAAGGTTTCTGGAGTAGGAGTCTCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR TCA 72 bp | ACATTGTCACAGGCAAAGTACAAGGCTCGGTTGAGGTaGCTGACAGTGATGCAGAATCTCAGAACGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: TLSQAKYKARLR*LTVMQNLRTTS Trigger: AGATGTCGTTCTGAGATTCTGCATCACTGTCAGTCACCTCAACCGAGCCTTGTACTTTGCCTGTGACAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR CCA 72 bp | GAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTaGGGAGTCACTGCCTGTAGACAGGTGTGCTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELWSCLCVSNSF*GVTACRQVCFV Trigger: CACAAAGCACACCTGTCTACAGGCAGTGACTCCCCAAAAGCTATTAGACACACACAAGCATGACCATAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAGAATCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGACTTCAGTCAAGGAGTaGAATTACAATGAGGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HRIIVQYLQEEARHGISLTSVKE*NYNEVG Trigger: GCCAACCTCATTGTAATTCAACTCCTTGACTGAAGT...CAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGATTCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR CCA 72 bp | AGGCTGTTCACGGATTGTTTTGAATTGGGACCATTATaGTGTGTCCGCACCTTTCCCCCAACATTTAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: RLFTDCFELGPL*CVRTFPPTFKF Trigger: AAATTTAAATGTTGGGGGAAAGGTGCGGACACACCATAATGGTCCCAATTCAAAACAATCCGTGAACAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| 3UTR CCA 72 bp | GTCTTTGGCAGGTTCTTCCCCTCATCCCTAAGGATCTaGATTTTAACTTCAGTCAAGGAGTTGAATTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: VFGRFFPSSLRI*ILTSVKELNYN Trigger: ATTGTAATTCAACTCCTTGACTGAAGTTAAAATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | AATGAACGCTGTGCCCACTTTTCCTGGTCCACTCGGGGAGCTAGCCCAGACTTTCTTGGCTCTGAGCACTaGAGCGGACCCAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NERCAHFSWSTRGASPDFLGSEH*SGPRRP Trigger: TGGACGCCTGGGTCCGCTTCAGTGCTCAGAGCCAAG...AAAGTCTGGGCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACAGCGTTCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| CDS-3UTR TCA 90 bp | CATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAACTTGGCTCTGAGCACTaGAGCGGACCCAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGISLGSQRKSKSQVRKELGSEH*SGPRRP Trigger: TGGACGCCTGGGTCCGCTTCAGTGCTCAGAGCCAAG...TTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCGAAGAGACGCCGGGCATGAAATGAAGCCTGGGAAAGTATGGAGGGTGCGTCCGAGGCTCAGATaGCCCTCCAGTTGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CERRDAGHEMKPGKVWRVRPRLR*PSSCRI Trigger: GATTCGACAACTGGAGGGTCATCTGAGCCTCGGACG...CACCCTCCATACTTTCCCAGGCTTCATTTCATGCCCGGCGTCTCTTCGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR CAA 72 bp | CCCACAATCCCAGGGCCACAACGCCAGAGGCCTAGTTaGTCCAGTGGGATGAAAAGGTCACAGGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTIPGPQRQRPS*SSGMKRSQAFL Trigger: CAGAAATGCCTGTGACCTTTTCATCCCACTGGACAAACTAGGCCTCTGGCGTTGTGGCCCTGGGATTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| 3UTR CAA 72 bp | AGCTTCCATCTCACCCACCTGGGCTCCCTCCTTATCTaGTACCACAGTGTCAGTCAGGGCTTGAGTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFHLTHLGSLLI*YHSVSQGLSRS Trigger: GCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAGGAGGGAGCCCAGGTGGGTGAGATGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCGAAGAGACGCCGGGCATGAAATGAAGCCTGGGAAAGTATGGAGGGTGACAGAATGGAGGATATaGGGCCACACAGCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CERRDAGHEMKPGKVWRVTEWRI*GHTAPQ Trigger: TTGTGGGGCTGTGTGGCCTCATATCCTCCATTCTGT...CACCCTCCATACTTTCCCAGGCTTCATTTCATGCCCGGCGTCTCTTCGCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR GCA 90 bp | CATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGISLGSQRKSKSQVRKELAPCL*KAWPRR Trigger: CCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAG...TTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEARHGISLGSQRKSKSQLAPCL*KAWPRR Trigger: CCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAG...TTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTACTCAGAAGCCTAAAGCAGGGGAGCTCAGAGCTTCAGCCCTGCCTAGGTCTTCAAAGCCAGTTGTaGCAGACTTCCTCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLRSLKQGSSELQPCLGLQSQL*QTSSWS Trigger: ACTCCAGGAGGAAGTCTGCCACAACTGGCTTTGAAG...ACCTAGGCAGGGCTGAAGCTCTGAGCTCCCCTGCTTTAGGCTTCTGAGTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| 3UTR CAA 72 bp | AATCTCAGAACGACATCTGACAGGTGCACAGCCCTTTaGGCTGACTCCAGGGCATCTGTTGAGTTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRTTSDRCTAL*ADSRASVEFPR Trigger: CCTGGGGAACTCAACAGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCTGTCAGATGTCGTTCTGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAACAGAATGGAGGATATaGGGCCACACAGCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EEARHGISLGSQRKSKSQTEWRI*GHTAPQ Trigger: TTGTGGGGCTGTGTGGCCTCATATCCTCCATTCTGT...TTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | GCTTGCTTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTTCCCGGGCTTGGCTCTaGGCACTGAAGCGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACLLCGQGPVIYIESLYSSRAWL*ALKRTQ Trigger: CTGGGTCCGCTTCAGTGCTCAGAGCCAAGCCCGGGA...ACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAAGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCCGTCCGAGGCTCAGATaGCCCTCCAGTTGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLYSIYRKRPDMASAWVVRPRLR*PSSCRI Trigger: GATTCGACAACTGGAGGGTCATCTGAGCCTCGGACG...GACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLGSQRKSKSQVRKETLLAPCL*KAWPRR Trigger: CCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAG...TAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR GCA 90 bp | CTTATCTTGTACCACAGTGTCAGTCAGGGCTTGAGTCGTAGCCAGGGACAGATTCTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LILYHSVSQGLSRSQGQILAPCL*KAWPRR Trigger: CCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAG...AATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| CDS-3UTR CCA 90 bp | CCCGTCTTTGGCAGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTAACTTCATGTGCCCACTTTTCCTaGTCCACTCGGGGAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVFGRFFPSSLRIWILTSCAHFS*STRGAS Trigger: GCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACA...TGAAGTTAAAATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | GAGACCAGATGTCAACGAGCAGCTGGACACAGTAACACTCACTGTAGGCTACTCAAGGCTCGGTTGAGGTaGCTGACAGTGATGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ETRCQRAAGHSNTHCRLLKARLR*LTVMQN Trigger: ATTCTGCATCACTGTCAGTCACCTCAACCGAGCCTT...GAGTAGCCTACAGTGAGTGTTACTGTGTCCAGCTGCTCGTTGACATCTGGTCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTTTGTCCAGTGGGATaGAAAGGTCACAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEARHGISLGSQRKSKSQVCPVG*KGHRHF Trigger: GAAATGCCTGTGACCTTTTCATCCCACTGGACAAAC...TTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATGTCTGGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | CATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAGTTTGTCCAGTGGGATaGAAAGGTCACAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HGISLGSQRKSKSQVRKEVCPVG*KGHRHF Trigger: GAAATGCCTGTGACCTTTTCATCCCACTGGACAAAC...TTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | ATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAACAGAATGGAGGATATaGGGCCACACAGCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLGSQRKSKSQVRKETLTEWRI*GHTAPQ Trigger: TTGTGGGGCTGTGTGGCCTCATATCCTCCATTCTGT...TAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR CCA 90 bp | ATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTTCAAAGCCAGTTGTaGCAGACTTCCTCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MASAWVVRERARAKCGRKLQSQL*QTSSWS Trigger: ACTCCAGGAGGAAGTCTGCCACAACTGGCTTTGAAG...TTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACAGGTCCCGGGCTTGGCTCTaGGCACTGAAGCGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCGQGPVIYIESLYSIYRSRAWL*ALKRTQ Trigger: CTGGGTCCGCTTCAGTGCTCAGAGCCAAGCCCGGGA...CCTGTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTTGTGCCCACTTTTCCTaGTCCACTCGGGGAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRKSKSQVRKETLISTCCAHFS*STRGAS Trigger: GCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACA...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| 3UTR CAA 72 bp | TCCCTCCTTATCTTGTACCACAGTGTCAGTCAGGGCTaGAGTCGTAGCCAGGGACAGATTAGGGTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLILYHSVSQG*SRSQGQIRVRI Trigger: TATTCTCACCCTAATCTGTCCCTGGCTACGACTCAAGCCCTGACTGACACTGTGGTACAAGATAAGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGCTTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTCGTCCGAGGCTCAGATaGCCCTCCAGTTGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ACLLCGQGPVIYIESLYSRPRLR*PSSCRI Trigger: GATTCGACAACTGGAGGGTCATCTGAGCCTCGGACG...ACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAAGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | TTCCTGACCCGTCTTTGGCAGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTTCGCCTGCTGTAAGCTaGAGTCTCTTGTTCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTRLWQVLPLIPKDLDFSPAVS*SLLFHQ Trigger: TTGATGGAACAAGAGACTTCAGCTTACAGCAGGCGA...AAAATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCGTTTGTCCAGTGGGATaGAAAGGTCACAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYSIYRKRPDMASAWVVVCPVG*KGHRHF Trigger: GAAATGCCTGTGACCTTTTCATCCCACTGGACAAAC...GACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | CTAAGAAAGAGAATTCTGTCTCACGGTAACAAATTCTTAACTAGACTCAAGACACTTGGCTCTGAGCACTaGAGCGGACCCAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRKRILSHGNKFLTRLKTLGSEH*SGPRRP Trigger: TGGACGCCTGGGTCCGCTTCAGTGCTCAGAGCCAAG...TGTCTTGAGTCTAGTTAAGAATTTGTTACCGTGAGACAGAATTCTCTTTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
||
| CDS-3UTR TCA 90 bp | CATAGAATCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGAAGGCTCGGTTGAGGTaGCTGACAGTGATGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRIIVQYLQEEARHGISLKARLR*LTVMQN Trigger: ATTCTGCATCACTGTCAGTCACCTCAACCGAGCCTT...CAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGATTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | GCTTGCTTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTAAGGCTCGGTTGAGGTaGCTGACAGTGATGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACLLCGQGPVIYIESLYSKARLR*LTVMQN Trigger: ATTCTGCATCACTGTCAGTCACCTCAACCGAGCCTT...ACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAAGCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
||
| CDS-3UTR TCA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTTCGCCTGCTGTAAGCTaGAGTCTCTTGTTCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRKSKSQVRKETLISTCSPAVS*SLLFHQ Trigger: TTGATGGAACAAGAGACTTCAGCTTACAGCAGGCGA...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR TCA 90 bp | AGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTAACTTCAGTCAAGGAGTTGTCGCCTGCTGTAAGCTaGAGTCTCTTGTTCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: RFFPSSLRIWILTSVKELSPAVS*SLLFHQ Trigger: TTGATGGAACAAGAGACTTCAGCTTACAGCAGGCGA...CAACTCCTTGACTGAAGTTAAAATCCAGATCCTTAGGGATGAGGGGAAGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CCA 90 bp | CTAAGAAAGAGAATTCTGTCTCACGGTAACAAATTCTTAACTAGACTCAAGACATGTGCCCACTTTTCCTaGTCCACTCGGGGAGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LRKRILSHGNKFLTRLKTCAHFS*STRGAS Trigger: GCTAGCTCCCCGAGTGGACCAGGAAAAGTGGGCACA...TGTCTTGAGTCTAGTTAAGAATTTGTTACCGTGAGACAGAATTCTCTTTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR GCA 90 bp | TTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACACGACATCTGACAGGTaGACAGCCCTTTTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLCGQGPVIYIESLYSIYTTSDR*TALLAD Trigger: GTCAGCCAAAAGGGCTGTGCACCTGTCAGATGTCGT...GTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR GCA 90 bp | AGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTAACTTCAGTCAAGGAGTTGAAACCTTCATTCGCCTaGTGTAAGCTGAAGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RFFPSSLRIWILTSVKELKPSFA*CKLKSL Trigger: AAGAGACTTCAGCTTACAGCAGGCGAATGAAGGTTT...CAACTCCTTGACTGAAGTTAAAATCCAGATCCTTAGGGATGAGGGGAAGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR GCA 90 bp | GCTTGCTTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTAAACCTTCATTCGCCTaGTGTAAGCTGAAGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ACLLCGQGPVIYIESLYSKPSFA*CKLKSL Trigger: AAGAGACTTCAGCTTACAGCAGGCGAATGAAGGTTT...ACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAAGCAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR GCA 90 bp | TTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACAAACCTTCATTCGCCTaGTGTAAGCTGAAGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLCGQGPVIYIESLYSIYKPSFA*CKLKSL Trigger: AAGAGACTTCAGCTTACAGCAGGCGAATGAAGGTTT...GTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | GCTGACTCCAGGGCATCTGTTGAGTTCCCCAGGCGTAGCAACTTTCGTCCGAGGCAGCCGCTCCCGGGCTaGGCTCTGAGCACTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: ADSRASVEFPRRSNFRPRQPLPG*ALSTEA Trigger: CGCTTCAGTGCTCAGAGCCAAGCCCGGGAGCGGCTG...CCTCGGACGAAAGTTGCTACGCCTGGGGAACTCAACAGATGCCCTGGAGTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| CDS-3UTR CAA 90 bp | ATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACAGCCGCTCCCGGGCTaGGCTCTGAGCACTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: MASAWVVRERARAKCGRKQPLPG*ALSTEA Trigger: CGCTTCAGTGCTCAGAGCCAAGCCCGGGAGCGGCTG...TTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
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| CDS-3UTR CAA 90 bp | TTGGCACACAGTGACCATCTCAGCTTCCATCTCACCCACCTGGGCTCCCTCCTTCGCCAGAGGCCTAGTTaGTCCAGTGGGATGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LAHSDHLSFHLTHLGSLLRQRPS*SSGMKR Trigger: CCTTTTCATCCCACTGGACAAACTAGGCCTCTGGCG...AAGGAGGGAGCCCAGGTGGGTGAGATGGAAGCTGAGATGGTCACTGTGTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS GCA 90 bp | AGTTGTCGAATCTGTTTCTGTAACTCGGGACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGGGAACAGGCATACTGGGCGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SCRICFCNSGLAPCL*KAWPRREQAYWAAL Trigger: GAGGGCCGCCCAGTATGCCTGTTCCCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAGTCCCGAGTTACAGAAACAGATTCGACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | CATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCCAGGGCATCTGTaGAGTTCCCCAGGCGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: HGISLGSQRKSKSQVRKETPGHL*SSPGVA Trigger: TGCTACGCCTGGGGAACTCAACAGATGCCCTGGAGT...TTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS GCA 90 bp | AGTTGTCGAATCTGTTTCTGTAACTCGGGACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGGGAACAGGCATACTGGGCGGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: SCRICFCNSGLAPCL*KAWPRREQAYWAAL Trigger: TAGGGCCGCCCAGTATGCCTGTTCCCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAGTCCCGAGTTACAGAAACAGATTCGACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
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| CDS GCA 90 bp | AGTTGTCGAATCTGTTTCTGTAACTCGGGACTAGCCCCATGTCTCTaGAAAGCATGGCCGAGAAGGGAACAGGCATACTGGGCGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SCRICFCNSGLAPCL*KAWPRREQAYWAAT Trigger: TGTGGCCGCCCAGTATGCCTGTTCCCTTCTCGGCCATGCTTTGCAGAGACATGGGGCTAGTCCCGAGTTACAGAAACAGATTCGACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTCAGCCGCTCCCGGGCTaGGCTCTGAGCACTGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: SQRKSKSQVRKETLISTCQPLPG*ALSTEA Trigger: CGCTTCAGTGCTCAGAGCCAAGCCCGGGAGCGGCTG...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
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| CDS TCA 90 bp | TCTGTTGAGTTCCCCAGGCGTAGCAACTTTCGTCCGAGGCTCAGATaGCCCTCCAGTTGTCGAATCTGTTTCTGTAACTCGGGACTAGCC | + |
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Preference number: 5 (lower is better) Translates to: SVEFPRRSNFRPRLR*PSSCRICFCNSGLA Trigger: GGCTAGTCCCGAGTTACAGAAACAGATTCGACAACTGGAGGGTCATCTGAGCCTCGGACGAAAGTTGCTACGCCTGGGGAACTCAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | TTCCTGACCCGTCTTTGGCAGGTTCTTCCCCTCATCCCTAAGGATCTGGATTTTAGGTGCACAGCCCTTTaGGCTGACTCCAGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: FLTRLWQVLPLIPKDLDFRCTAL*ADSRAS Trigger: AGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCT...AAAATCCAGATCCTTAGGGATGAGGGGAAGAACCTGCCAAAGACGGGTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | ATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACGCCAGAGGCCTAGTTaGTCCAGTGGGATGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: MASAWVVRERARAKCGRKRQRPS*SSGMKR Trigger: CCTTTTCATCCCACTGGACAAACTAGGCCTCTGGCG...TTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | CATGGCATCAGCCTGGGTAGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAAAACTTCAAAGCCAGTaGTGGCAGACTTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HGISLGSQRKSKSQVRKEKLQSQ*WQTSSW Trigger: CCAGGAGGAAGTCTGCCACAACTGGCTTTGAAGTTT...TTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACTACCCAGGCTGATGCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | CTTGCCAATCCACTGAGTTATGGTCATGCTTGTGTGTGTCTAATAGCTTTTGGGACTCCAGGGCATCTGTaGAGTTCCCCAGGCGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: LANPLSYGHACVCLIAFGTPGHL*SSPGVA Trigger: TGCTACGCCTGGGGAACTCAACAGATGCCCTGGAGT...CCCAAAAGCTATTAGACACACACAAGCATGACCATAACTCAGTGGATTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118557.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGAGAAAGAGCAAGAGCCAAGTGCGGAAGGAAACTCTAATATCAACGTGTAGGTGCACAGCCCTTTaGGCTGACTCCAGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: SQRKSKSQVRKETLISTCRCTAL*ADSRAS Trigger: AGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCT...ACACGTTGATATTAGAGTTTCCTTCCGCACTTGGCTCTTGCTCTTTCTCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | TCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGGGTAGTCAAACTTCAAAGCCAGTaGTGGCAGACTTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SLYSIYRKRPDMASAWVVKLQSQ*WQTSSW Trigger: CCAGGAGGAAGTCTGCCACAACTGGCTTTGAAGTTT...GACTACCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | CATAGAATCATTGTACAGTATTTACAGGAAGAGGCCAGACATGGCATCAGCCTGCGCCAGAGGCCTAGTTaGTCCAGTGGGATGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HRIIVQYLQEEARHGISLRQRPS*SSGMKR Trigger: CCTTTTCATCCCACTGGACAAACTAGGCCTCTGGCG...CAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGATTCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | TTGCTCTGTGGGCAAGGACCAGTTATTTACATAGAATCATTGTACAGTATTTACAGGTGCACAGCCCTTTaGGCTGACTCCAGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: LLCGQGPVIYIESLYSIYRCTAL*ADSRAS Trigger: AGATGCCCTGGAGTCAGCCAAAAGGGCTGTGCACCT...GTAAATACTGTACAATGATTCTATGTAAATAACTGGTCCTTGCCCACAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS-3UTR CAA 90 bp | CCTTTTAAATATCTGGCCAGGAGGCTAAGAAAGAGAATTCTGTCTCACGGTAACAAACTTCAAAGCCAGTaGTGGCAGACTTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PFKYLARRLRKRILSHGNKLQSQ*WQTSSW Trigger: CCAGGAGGAAGTCTGCCACAACTGGCTTTGAAGTTT...GTTACCGTGAGACAGAATTCTCTTTCTTAGCCTCCTGGCCAGATATTTAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118557.8 ENSMUST00000165842.3 |
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| CDS CAA 72 bp | GGCATACTGGGCGGCCCTACACAGCCGCTCCCGGGCTaGGCTCTGAGCACTGAAGCGGACCCAGGCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GILGGPTQPLPG*ALSTEADPGVH Trigger: ATGGACGCCTGGGTCCGCTTCAGTGCTCAGAGCCAAGCCCGGGAGCGGCTGTGTAGGGCCGCCCAGTATGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
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| CDS CAA 72 bp | AACAGGCATACTGGGCGGCCACAGCCGCTCCCGGGCTaGGCTCTGAGCACTGAAGCGGACCCAGGCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: NRHTGRPQPLPG*ALSTEADPGVH Trigger: ATGGACGCCTGGGTCCGCTTCAGTGCTCAGAGCCAAGCCCGGGAGCGGCTGTGGCCGCCCAGTATGCCTGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156015.2 |
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| CDS CCA 72 bp | CTCTGCAAAGCATGGCCGAGAAGGGAACAGGCATACTaGGCGGCCCTACACAGCCGCTCCCGGGCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LCKAWPRREQAY*AALHSRSRAWL Trigger: GAGCCAAGCCCGGGAGCGGCTGTGTAGGGCCGCCCAGTATGCCTGTTCCCTTCTCGGCCATGCTTTGCAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 |
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| CDS TCA 72 bp | TTCCCCAGGCGTAGCAACTTTCGTCCGAGGCTCAGATaGCCCTCCAGTTGTCGAATCTGTTTCTGTAACTCG | + |
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Preference number: 6 (lower is better) Translates to: FPRRSNFRPRLR*PSSCRICFCNS Trigger: CGAGTTACAGAAACAGATTCGACAACTGGAGGGTCATCTGAGCCTCGGACGAAAGTTGCTACGCCTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048766.15 ENSMUST00000118557.8 ENSMUST00000165842.3 |
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