Pregenerated sensors for PEX11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030545Ensembl transcript IDs: ENSMUST00000032761.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACACGACTGCAGCAATGACCGGGACCAGCAGGTTAACAGGCGCTaGGCCCAGCTCCCCTCCATCTCACTCCTGACACCCGTGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: GHDCSNDRDQQVNRR*AQLPSISLLTPVGV Trigger: CACTCCCACGGGTGTCAGGAGTGAGATGGAGGGGAGCTGGGCTCAGCGCCTGTTAACCTGCTGGTCCCGGTCATTGCTGCAGTCGTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 90 bp | CCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTaGTGTTCTTCTGAGGCTACTGGACATGGTCAGGACACGACTGCA | + |
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Preference number: 1 (lower is better) Translates to: PRAFYLWTQPPPQRH*CSSEATGHGQDTTA Trigger: TGCAGTCGTGTCCTGACCATGTCCAGTAGCCTCAGAAGAACATCAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 90 bp | GGTGACCTCCCACCTGCTTTCACCTCTGGTCCCTTCTGTGGCTCTTaGTTGCTCCTAGCATTACCGAGAGCCTTCTACCTGTGGACACAG | + |
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Preference number: 1 (lower is better) Translates to: GDLPPAFTSGPFCGS*LLLALPRAFYLWTQ Trigger: CTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGCAGGTGGGAGGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CCA 90 bp | AACACGGGCAAATGCACTGACCCGGTGTCCCCACGACCCCTCCACTaGCCCTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: NTGKCTDPVSPRPLH*PYCSFLSLSVVLRK Trigger: TTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCATTTGCCCGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 90 bp | CCTAAACCAACCAAACTCAAGACAGGAAGACTGAACCGTGAAGTGTaGACACGGGCAAATGCACTGACCCGGTGTCCCCACGACCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: PKPTKLKTGRLNREV*TRANALTRCPHDPS Trigger: GGAGGGGTCGTGGGGACACCGGGTCAGTGCATTTGCCCGTGTTCACACTTCACGGTTCAGTCTTCCTGTCTTGAGTTTGGTTGGTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 90 bp | CTTCAGCCCTGGTGTGCTTGTGTGGAATCAGGGACCTGTGCAACCTaGTCTGTAATTCTAGTTTCTTTGGGTCTTTCATGGTTTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LQPWCACVESGTCAT*SVILVSLGLSWFLS Trigger: GGAGAGAAACCATGAAAGACCCAAAGAAACTAGAATTACAGATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 90 bp | CCCTCCACTGGCCCTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTaGGAAAACCAGATTTGTCACAGAAAACTGACGTTCCTACATCTA | + |
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Preference number: 1 (lower is better) Translates to: PSTGPIALSCPSQLS*ENQICHRKLTFLHL Trigger: TAGATGTAGGAACGTCAGTTTTCTGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 90 bp | TGCTGTGCTTCAGCCCTGGTGTGCTTGTGTGGAATCAGGGACCTGTaGAACCTGATCTGTAATTCTAGTTTCTTTGGGTCTTTCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: CCASALVCLCGIRDL*NLICNSSFFGSFMV Trigger: AACCATGAAAGACCCAAAGAAACTAGAATTACAGATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 90 bp | TACTATGTACATAAAAGATGCTCAGTAATGTTACCTGAACAGAAATaGAGTTACTGTAGCATGCGCCACTGCTGGTCCTACCTCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: YYVHKRCSVMLPEQK*SYCSMRHCWSYLCS Trigger: TGAGCAGAGGTAGGACCAGCAGTGGCGCATGCTACAGTAACTTCATTTCTGTTCAGGTAACATTACTGAGCATCTTTTATGTACATAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGACCCGGTGTCCCCACGACCCCTCCACTGGCCCTATTGCTCTTTCCTGGCTTCAGCCCTGGTGTaGTTGTGTGGAATCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CTDPVSPRPLHWPYCSFLASALV*LCGIRD Trigger: GTCCCTGATTCCACACAAGCACACCAGGGCTGAAGC...CAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGACCCGGTGTCCCCACGACCCCTCCACTGGCCCTATTGCTCTTTCCTGCCCTTCTGTGGCTCTTaGTTGCTCCTAGCATTACCG | + |
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Preference number: 2 (lower is better) Translates to: CTDPVSPRPLHWPYCSFLPFCGS*LLLALP Trigger: CGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGG...CAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CAA 90 bp | GACCTCCCACCTGCTTTCACCTCTGGTCCCTTCTGTGGCTCTTGCTaGCTCCTAGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DLPPAFTSGPFCGSC*LLALPRAFYLWTQP Trigger: AGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGCAGGTGGGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTTCATAGACTGGGACAGAAACCATCAACTGAAGCTCCAGGACTCGGGGCATAACAGGCCGCGGTaGCCTCCCACCTGCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LHFIDWDRNHQLKLQDSGHNRPR*PPTCFH Trigger: GTGAAAGCAGGTGGGAGGTCACCGCGGCCTGTTATG...CCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGGGAATCAGGGACCTGTaGAACCTGATCTGTAATTCT | + |
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Preference number: 2 (lower is better) Translates to: SITESLLPVDTASAPEALGIRDL*NLICNS Trigger: AGAATTACAGATCAGGTTGCACAGGTCCCTGATTCC...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCATTTCATAGACTGGGACAGAAACCATCAACTGAAGCTCCAGGACTCGGGGCTCTGGTCCCTTCTGTaGCTCTTGCTTGCTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LHFIDWDRNHQLKLQDSGLWSLL*LLLAPS Trigger: GCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAG...CCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGCTCAGTAATGTTACCTaGACAGAAATGAAGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: SITESLLPVDTASAPEALLSNVT*TEMKLL Trigger: CAGTAACTTCATTTCTGTTCAGGTAACATTACTGAG...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACAAGAGCCTTCTACCTGTaGACACAGCCTCCGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTRAFYL*TQPPPQ Trigger: CTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCT...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CAA 90 bp | AAACTTAAGCAGAGCTGGGAGTGCTGTGCTTCAGCCCTGGTGTGCTaGTGTGGAATCAGGGACCTGTGCAACCTGATCTGTAATTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: KLKQSWECCASALVC*CGIRDLCNLICNSS Trigger: ACTAGAATTACAGATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTTCATAGACTGGGACAGAAACCATCAACTGAAGCTCCAGGACTCGGGGTGGAAAGTCTCCCAATaGATCTGTGCTATCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LHFIDWDRNHQLKLQDSGWKVSQ*ICAISF Trigger: AAAGCTGATAGCACAGATTCATTGGGAGACTTTCCA...CCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTAAAGCAGAGCTGGGAGTaGTGTGCTTCAGCCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLKQSWE*CASALV Trigger: CACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTT...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACATTGCATTTCATAGACTaGGACAGAAACCATCAACTG | + |
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Preference number: 2 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTLHFID*DRNHQL Trigger: CAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTACCCTCTCAGTTGTCCTaGGAAAACCAGATTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLPSQLS*ENQICH Trigger: GTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGG...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTAGGCTCTTACTATGTACATAAAAGATGCTCAGTAATGTTACCTGAACAGAAATGTTTGTTCCACTaGACTGCTAGCCTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLGSYYVHKRCSVMLPEQKCLFH*TASLKA Trigger: GGCTTTAAGGCTAGCAGTTCAGTGGAACAAACATTT...CTGTTCAGGTAACATTACTGAGCATCTTTTATGTACATAGTAAGAGCCTAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTTATTTGTCCAGCAACACTAGGCTCTTACTATGTACATAAAAGATGCTTACCTGAACAGAAATaGAGTTACTGTAGCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: FIFICPATLGSYYVHKRCLPEQK*SYCSMR Trigger: GCGCATGCTACAGTAACTTCATTTCTGTTCAGGTAA...GCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATAAAGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTACTCCCAATGAATCTGTaGTATCAGCTTTGTTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLLPMNL*YQLCFV Trigger: TACAAAACAAAGCTGATAGCACAGATTCATTGGGAG...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 72 bp | TGCAGCAATGACCGGGACCAGCAGGTTAACAGGCGCTaGGCCCAGCTCCCCTCCATCTCACTCCTGACACCC | + |
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Preference number: 3 (lower is better) Translates to: CSNDRDQQVNRR*AQLPSISLLTP Trigger: GGGTGTCAGGAGTGAGATGGAGGGGAGCTGGGCTCAGCGCCTGTTAACCTGCTGGTCCCGGTCATTGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 72 bp | GACCCGGTGTCCCCACGACCCCTCCACTGGCCCTATTaGTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: DPVSPRPLHWPY*SFLSLSVVLRK Trigger: TTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CCA 72 bp | AAATGCACTGACCCGGTGTCCCCACGACCCCTCCACTaGCCCTATTGCTCTTTCCTGTCCCTCTCAGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: KCTDPVSPRPLH*PYCSFLSLSVV Trigger: GACAACTGAGAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 72 bp | TTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTaGTGTTCTTCTGAGGCTACTGGACATGGTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FYLWTQPPPQRH*CSSEATGHGQD Trigger: GTCCTGACCATGTCCAGTAGCCTCAGAAGAACATCAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 72 bp | AAGCAGAGCTGGGAGTGCTGTGCTTCAGCCCTGGTGTaGTTGTGTGGAATCAGGGACCTGTGCAACCTGATC | + |
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Preference number: 3 (lower is better) Translates to: KQSWECCASALV*LCGIRDLCNLI Trigger: GATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CCA 72 bp | AACTTAAGCAGAGCTGGGAGTGCTGTGCTTCAGCCCTaGTGTGCTTGTGTGGAATCAGGGACCTGTGCAACC | + |
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Preference number: 3 (lower is better) Translates to: NLSRAGSAVLQP*CACVESGTCAT Trigger: GGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 72 bp | ACCAAACTCAAGACAGGAAGACTGAACCGTGAAGTGTaGACACGGGCAAATGCACTGACCCGGTGTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TKLKTGRLNREV*TRANALTRCPH Trigger: GTGGGGACACCGGGTCAGTGCATTTGCCCGTGTTCACACTTCACGGTTCAGTCTTCCTGTCTTGAGTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CAA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGCCTTTTCATCTTTATTaGTCCAGCAACACTAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: SITESLLPVDTASAPEALPFHLY*SSNTRL Trigger: GAGCCTAGTGTTGCTGGACAAATAAAGATGAAAAGG...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CAA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACATCAGCCCTGGTGTGCTaGTGTGGAATCAGGGACCTG | + |
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Preference number: 3 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTSALVC*CGIRDL Trigger: CAGGTCCCTGATTCCACACAAGCACACCAGGGCTGA...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CAA 90 bp | ACGACCCCTCCACTGGCCCTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGTCTGTGCTATCAGCTTaGTTTTGTACTGTCATAGTC | + |
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Preference number: 3 (lower is better) Translates to: TTPPLALLLFPVPLSCPESVLSA*FCTVIV Trigger: GACTATGACAGTACAAAACAAAGCTGATAGCACAGA...CTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 72 bp | TCAGCCCTGGTGTGCTTGTGTGGAATCAGGGACCTGTaGAACCTGATCTGTAATTCTAGTTTCTTTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SALVCLCGIRDL*NLICNSSFFGS Trigger: AGACCCAAAGAAACTAGAATTACAGATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CAA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACATCCCTTCTGTGGCTCTaGCTTGCTCCTAGCATTACC | + |
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Preference number: 3 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTSLLWL*LAPSIT Trigger: GGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGA...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR TCA 72 bp | CATAAAAGATGCTCAGTAATGTTACCTGAACAGAAATaGAGTTACTGTAGCATGCGCCACTGCTGGTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: HKRCSVMLPEQK*SYCSMRHCWSY Trigger: GTAGGACCAGCAGTGGCGCATGCTACAGTAACTTCATTTCTGTTCAGGTAACATTACTGAGCATCTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR-3UTR CAA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACAGCTATCAGCTTTGTTTaGTACTGTCATAGTCCTTAT | + |
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Preference number: 3 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTAISFV*YCHSPY Trigger: ATAAGGACTATGACAGTACAAAACAAAGCTGATAGC...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR GCA 72 bp | TTTTCAAGAATCACCTTCACATTTATGGGAAACAATTaGTTAGTGCATAGTTCTCATTTCCACTTAGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: FSRITFTFMGNN*LVHSSHFHLVD Trigger: GTCTACTAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGTGATTCTTGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR TCA 90 bp | TGCACTGACCCGGTGTCCCCACGACCCCTCCACTGGCCCTATTGCTCTTTCCTGAACATGCATGCGTGCTaGGTGGCTCTGAAAAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: CTDPVSPRPLHWPYCSFLNMHAC*VALKSR Trigger: CCGACTTTTCAGAGCCACTCAGCACGCATGCATGTT...CAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGCGAGCCGCCCACCTTTaGCATTTCTCTCTGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: SITESLLPVDTASAPEALRAAHL*HFSLLT Trigger: AGTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCG...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGGAAAACTTAAGCAGAGCTGGGAGTGCTGTGCTTCAGCCCTGGTGTGCTCGTGCTGAGTGGCTCTaGAAAGTCGGTCCCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KRENLSRAGSAVLQPWCARAEWL*KVGPGP Trigger: AGGGCCGGGACCGACTTTTCAGAGCCACTCAGCACG...AGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTTTTCCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR TCA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGAATAAACCACGCGGTTaGGGTTGGCTAATGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SITESLLPVDTASAPEALNKPRG*GWLMSG Trigger: GCCTGACATTAGCCAACCTCAACCGCGTGGTTTATT...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CCA 90 bp | TGCACTGACCCGGTGTCCCCACGACCCCTCCACTGGCCCTATTGCTCTTTCCTGTGTCGCTTTAGAGACTaGAATAGGAGGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CTDPVSPRPLHWPYCSFLCRFRD*NRRRRK Trigger: CTTCCTCCTCCTCCTATTCCAGTCTCTAAAGCGACA...CAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CAA 72 bp | CAGAGCTGGGAGTGCTGTGCTTCAGCCCTGGTGTGCTaGTGTGGAATCAGGGACCTGTGCAACCTGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: QSWECCASALVC*CGIRDLCNLIC Trigger: ACAGATCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGTCTAAGCAACATGCATaGGTGCTGAGTGGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SITESLLPVDTASAPEALSKQHA*VLSGSE Trigger: TTCAGAGCCACTCAGCACGCATGCATGTTGCTTAGA...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGGAAAACTTAAGCAGAGCTGGGAGTGCTGTGCTTCAGCCCTGGTGTGCTGCGAGGTCAGCGGCTTaGATGCTCTGCTCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRENLSRAGSAVLQPWCAARSAA*MLCSVA Trigger: GGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGC...AGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTTTTCCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CAA 72 bp | CCTGCTTTCACCTCTGGTCCCTTCTGTGGCTCTTGCTaGCTCCTAGCATTACCGAGAGCCTTCTACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAFTSGPFCGSC*LLALPRAFYLW Trigger: CCACAGGTAGAAGGCTCTCGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR TCA 90 bp | TTGCATTTCATAGACTGGGACAGAAACCATCAACTGAAGCTCCAGGACTCGGGGTGGTCTCCAGCCTCTTaGGCTTCAGTACCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHFIDWDRNHQLKLQDSGWSPAS*ASVPRP Trigger: AGGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCA...CCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CCA 90 bp | TTGCATTTCATAGACTGGGACAGAAACCATCAACTGAAGCTCCAGGACTCGGGGGCTCAGTTGCCTGGATaGCATGGAACACGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHFIDWDRNHQLKLQDSGAQLPG*HGTRCP Trigger: TGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGC...CCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTATGAAATGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACAGCGGCTTGGATGCTCTaGTCAGTTGCCTGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTAAWML*SVAWMA Trigger: TGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGC...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACAGGTCAGCGGCTTGGATaGTCTGCTCAGTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTGQRLG*SAQLPG Trigger: TCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACC...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CCA 90 bp | ACACTAGGCTCTTACTATGTACATAAAAGATGCTCAGTAATGTTACCTGAACAGAGTCGGTCCCGGCCCTaGCTTTGGTTGGCGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGSYYVHKRCSVMLPEQSRSRP*LWLATR Trigger: CCGAGTCGCCAACCAAAGCCAGGGCCGGGACCGACT...CTGTTCAGGTAACATTACTGAGCATCTTTTATGTACATAGTAAGAGCCTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CCA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACACTCTGCTCAGTTGCCTaGATGGCATGGAACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTLCSVA*MAWNTL Trigger: CAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAG...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTAGATGCTCTGCTCAGTTaGCTGGATGGCATGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLDALLS*LDGMEH Trigger: GTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATC...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR TCA 90 bp | TTCATCTTTATTTGTCCAGCAACACTAGGCTCTTACTATGTACATAAAAGATGCCAGCCAAAGAGGATATaGGACCTCCAAGTCCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FIFICPATLGSYYVHKRCQPKRI*DLQVLP Trigger: TGGTAGGACTTGGAGGTCTCATATCCTCTTTGGCTG...GCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATAAAGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR GCA 90 bp | TTCATCTTTATTTGTCCAGCAACACTAGGCTCTTACTATGTACATAAAAGATGCGGATTTCTCTCTCTTTaGTCTGTCACGTGCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIFICPATLGSYYVHKRCGFLSL*SVTCNL Trigger: CAAGTTGCACGTGACAGAGCAAAGAGAGAGAAATCC...GCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATAAAGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| 3UTR CAA 72 bp | ATTAAAGTTACAGTGCAAATAGGCATTTGCTGGTATTaGTCTTGTTTTAGCCACTTTAATCTCAACCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IKVTVQIGICWY*SCFSHFNLNPR Trigger: GCGGGGGTTGAGATTAAAGTGGCTAAAACAAGACAAATACCAGCAAATGCCTATTTGCACTGTAACTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CAA 90 bp | AGCATTACCGAGAGCCTTCTACCTGTGGACACAGCCTCCGCCCCAGAGGCACTGCTGGTCTCCAGCCTCTaGAGCTTCAGTACCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SITESLLPVDTASAPEALLVSSL*SFSTTA Trigger: GGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCAG...CAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 90 bp | TGGCTAATGTCAGGCATAAGCGGGGCGCGAGGTCAGCGGCTTGGATaGTCTGCTCAGTTGCCTGGATGGCATGGAACACGTTGCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WLMSGISGARGQRLG*SAQLPGWHGTRCPV Trigger: GACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATTAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CCA 90 bp | AAGCGGGGCGCGAGGTCAGCGGCTTGGATGCTCTGCTCAGTTGCCTaGATGGCATGGAACACGTTGCCCAGTCTGAACCATTTACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRGARSAAWMLCSVA*MAWNTLPSLNHLRP Trigger: TGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CCA 90 bp | AGGTTGGCTAATGTCAGGCATAAGCGGGGCGCGAGGTCAGCGGCTTaGATGCTCTGCTCAGTTGCCTGGATGGCATGGAACACGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLANVRHKRGARSAA*MLCSVAWMAWNTLP Trigger: GGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATTAGCCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 90 bp | AATGTCAGGCATAAGCGGGGCGCGAGGTCAGCGGCTTGGATGCTCTaGTCAGTTGCCTGGATGGCATGGAACACGTTGCCCAGTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NVRHKRGARSAAWML*SVAWMAWNTLPSLN Trigger: GTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CCA 90 bp | GCGAGGTCAGCGGCTTGGATGCTCTGCTCAGTTGCCTGGATGGCATaGAACACGTTGCCCAGTCTGAACCATTTACGGCCAGTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ARSAAWMLCSVAWMA*NTLPSLNHLRPVLT Trigger: TGTGAGCACTGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS TCA 90 bp | TCTTCGCCCAGAGGACAGTGTCACAGATGTAATAAACCACGCGGTTaGGGTTGGCTAATGTCAGGCATAAGCGGGGCGCGAGGTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPRGQCHRCNKPRG*GWLMSGISGARGQR Trigger: CCGCTGACCTCGCGCCCCGCTTATGCCTGACATTAGCCAACCTCAACCGCGTGGTTTATTACATCTGTGACACTGTCCTCTGGGCGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 90 bp | GAGGATTTCTCTCTCTTTGCTCTGTCACGTGCAACTTGTCCCATCTaGAGCAAGATCTCATACAGATCCCGGACCAGGCTCAGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EDFSLFALSRATCPI*SKISYRSRTRLSKR Trigger: CCTCTTGCTGAGCCTGGTCCGGGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCACGTGACAGAGCAAAGAGAGAGAAATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 90 bp | CTTAGGAGGGTCCCGAGAGGATTTCTCTCTCTTTGCTCTGTCACGTaGAACTTGTCCCATCTGCAGCAAGATCTCATACAGATCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRRVPRGFLSLCSVT*NLSHLQQDLIQIPD Trigger: GTCCGGGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCACGTGACAGAGCAAAGAGAGAGAAATCCTCTCGGGACCCTCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CAA 90 bp | CTATTGCTCTTTCCTGTCCCTCTCAGTTGTCCTGAGAAAACCAGATTTGTCACACGCGAGGTCAGCGGCTaGGATGCTCTGCTCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPVPLSCPEKTRFVTREVSG*DALLSC Trigger: GCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCG...TGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CAA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTAGCGAGCCGCCCACCTTaGCCATTTCTCTCTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLASRPP*PFLSVD Trigger: GTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCGC...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CAA 90 bp | ACCTTCACATTTATGGGAAACAATTGCTTAGTGCATAGTTCTCATTTCCACTTAGGATGCTCTGCTCAGTaGCCTGGATGGCATGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: TFTFMGNNCLVHSSHFHLGCSAQ*PGWHGT Trigger: TGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCC...TAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS-3UTR CAA 90 bp | TTCATCTTTATTTGTCCAGCAACACTAGGCTCTTACTATGTACATAAAAGATGCAGGATTTCTCTCTCTTaGCTCTGTCACGTGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: FIFICPATLGSYYVHKRCRISLS*LCHVQL Trigger: AAGTTGCACGTGACAGAGCAAAGAGAGAGAAATCCT...GCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATAAAGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 72 bp | CATAAGCGGGGCGCGAGGTCAGCGGCTTGGATGCTCTaGTCAGTTGCCTGGATGGCATGGAACACGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HKRGARSAAWML*SVAWMAWNTLP Trigger: GGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 72 bp | GGGCGCGAGGTCAGCGGCTTGGATGCTCTGCTCAGTTaGCTGGATGGCATGGAACACGTTGCCCAGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GREVSGLDALLS*LDGMEHVAQSE Trigger: TTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS GCA 72 bp | TCAGGCATAAGCGGGGCGCGAGGTCAGCGGCTTGGATaGTCTGCTCAGTTGCCTGGATGGCATGGAACACGT | + |
|
Preference number: 6 (lower is better) Translates to: SGISGARGQRLG*SAQLPGWHGTR Trigger: ACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CCA 72 bp | AATGTCAGGCATAAGCGGGGCGCGAGGTCAGCGGCTTaGATGCTCTGCTCAGTTGCCTGGATGGCATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: NVRHKRGARSAA*MLCSVAWMAWN Trigger: GTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CCA 72 bp | GCGGCTTGGATGCTCTGCTCAGTTGCCTGGATGGCATaGAACACGTTGCCCAGTCTGAACCATTTACGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAWMLCSVAWMA*NTLPSLNHLRP Trigger: TGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS TCA 72 bp | CAGTTGCCTGGATGGCATGGAACACGTTGCCCAGTCTaGACCATTTACGGCCAGTGCTCACACTGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QLPGWHGTRCPV*TIYGQCSHWSP Trigger: TGGAGACCAGTGTGAGCACTGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 72 bp | ATGCTCTGCTCAGTTGCCTGGATGGCATGGAACACGTaGCCCAGTCTGAACCATTTACGGCCAGTGCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: MLCSVAWMAWNT*PSLNHLRPVLT Trigger: TGTGAGCACTGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCAGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 90 bp | AGGGTCCCGAGAGGATTTCTCTCTCTTTGCTCTGTCACGTGCAACTaGTCCCATCTGCAGCAAGATCTCATACAGATCCCGGACCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVPRGFLSLCSVTCN*SHLQQDLIQIPDQA Trigger: AGCCTGGTCCGGGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCACGTGACAGAGCAAAGAGAGAGAAATCCTCTCGGGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS TCA 72 bp | AGAGGACAGTGTCACAGATGTAATAAACCACGCGGTTaGGGTTGGCTAATGTCAGGCATAAGCGGGGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGQCHRCNKPRG*GWLMSGISGAR Trigger: TCGCGCCCCGCTTATGCCTGACATTAGCCAACCTCAACCGCGTGGTTTATTACATCTGTGACACTGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 72 bp | CATTTACGGCCAGTGCTCACACTGGTCTCCAGCCTCTaGAGCTTCAGTACCACGGCCTCTTTGTCAGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HLRPVLTLVSSL*SFSTTASLSAL Trigger: TAAAGCTGACAAAGAGGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCAGTGTGAGCACTGGCCGTAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 90 bp | CAGGCTCAGCAAGAGGAAGTAGTAGTAATGGCGAGCCGCCCACCTTaGCCATTTCTCTCTGTTGACTCCAGAGGTAAGACCCACACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QAQQEEVVVMASRPP*PFLSVDSRGKTHTL Trigger: AAGAGTGTGGGTCTTACCTCTGGAGTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCGCCATTACTACTACTTCCTCTTGCTGAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 90 bp | AGTCTGAACCATTTACGGCCAGTGCTCACACTGGTCTCCAGCCTCTaGAGCTTCAGTACCACGGCCTCTTTGTCAGCTTTAGACTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLNHLRPVLTLVSSL*SFSTTASLSALDSN Trigger: GTTAGAGTCTAAAGCTGACAAAGAGGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCAGTGTGAGCACTGGCCGTAAATGGTTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 72 bp | CAAGAGGAAGTAGTAGTAATGGCGAGCCGCCCACCTTaGCCATTTCTCTCTGTTGACTCCAGAGGTAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: QEEVVVMASRPP*PFLSVDSRGKT Trigger: GGTCTTACCTCTGGAGTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCGCCATTACTACTACTTCCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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| CDS CAA 90 bp | CTCACACTGGTCTCCAGCCTCTTGAGCTTCAGTACCACGGCCTCTTaGTCAGCTTTAGACTCTAACAAATATCTAAGCAACATGCATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LTLVSSLLSFSTTAS*SALDSNKYLSNMHA Trigger: CGCATGCATGTTGCTTAGATATTTGTTAGAGTCTAAAGCTGACAAAGAGGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCAGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032761.8 |
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