Pregenerated sensors for PEX10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029047Ensembl transcript IDs: ENSMUST00000103180.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTGTGGCTTGGGAAGGGAGGGGAAGCCCACTATCTCCAGAGACTaGAGAAGCTGTAAATTACATGTGACAGACTCTCCCACCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: LCGLGREGKPTISRD*RSCKLHVTDSPTPP Trigger: GGGTGGGGTGGGAGAGTCTGTCACATGTAATTTACAGCTTCTTCAGTCTCTGGAGATAGTGGGCTTCCCCTCCCTTCCCAAGCCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR-3UTR TCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCACCTTCCAGCCTATCCTaGGCCCTGCCTCAGCCCGAT | + |
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Preference number: 2 (lower is better) Translates to: GIELRTSAEHPVLLASEAPSSLS*ALPQPD Trigger: ATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGG...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR-3UTR GCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCAGAACTTCTGAAGCAGTaGTCAGCTGTGTGGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GIELRTSAEHPVLLASEAELLKQ*SAVWLG Trigger: CCCAAGCCACACAGCTGAGCACTGCTTCAGAAGTTC...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCTGGGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCGGAGAAACTCTTCCATaGGTTCCATCCACTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: WLLGIELRTSAEHPVLLAGETLP*VPSTSW Trigger: CCAAGAAGTGGATGGAACTCATGGAAGAGTTTCTCC...GGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCTGGGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCACTATCTCCAGAGACTaGAGAAGCTGTAAATTACAT | + |
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Preference number: 2 (lower is better) Translates to: WLLGIELRTSAEHPVLLATISRD*RSCKLH Trigger: ATGTAATTTACAGCTTCTTCAGTCTCTGGAGATAGT...GGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR TCA 72 bp | GAGCCCAGAGTGTTATACTTCCCTTCCAGCCTATCCTaGGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: EPRVLYFPSSLS*ALPQPDGGLFF Trigger: AAAGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGTATAACACTCTGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR GCA 72 bp | GAGTGTTATACTTCCCTTCCAGCCTATCCTGAGCCCTaGCTCAGCCCGATGGTGGCCTCTTCTTTACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ECYTSLPAYPEP*LSPMVASSLQA Trigger: GGCCTGTAAAGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGTATAACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR CCA 72 bp | AAACACCCTGAACTTCTGAAGCAGTGCTCAGCTGTGTaGCTTGGGAAGGGAGGGGAAGCCCACTATCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KHPELLKQCSAV*LGKGGEAHYLQ Trigger: CTGGAGATAGTGGGCTTCCCCTCCCTTCCCAAGCCACACAGCTGAGCACTGCTTCAGAAGTTCAGGGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR TCA 72 bp | GGTGGCCTCTTCTTTACAGGCCTGAGTAAAACACCCTaGACTTCTGAAGCAGTGCTCAGCTGTGTGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GGLFFTGLSKTP*TSEAVLSCVAW Trigger: CCAAGCCACACAGCTGAGCACTGCTTCAGAAGTTCAGGGTGTTTTACTCAGGCCTGTAAAGAAGAGGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR CCA 72 bp | CCCAGCATAGATGGTTGTGAGCCACCGTGTGGCTGCTaGGAATTGAACTCAGAACTTCTGCAGAACATCCAG | + |
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Preference number: 3 (lower is better) Translates to: PSIDGCEPPCGC*ELNSELLQNIQ Trigger: CTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCACACGGTGGCTCACAACCATCTATGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR GCA 72 bp | GATCCCAGCATAGATGGTTGTGAGCCACCGTGTGGCTaGTGGGAATTGAACTCAGAACTTCTGCAGAACATC | + |
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Preference number: 3 (lower is better) Translates to: DPSIDGCEPPCG*WELNSELLQNI Trigger: GATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCACACGGTGGCTCACAACCATCTATGCTGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR TCA 72 bp | TTGGGAAGGGAGGGGAAGCCCACTATCTCCAGAGACTaGAGAAGCTGTAAATTACATGTGACAGACTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LGREGKPTISRD*RSCKLHVTDSP Trigger: GGGAGAGTCTGTCACATGTAATTTACAGCTTCTTCAGTCTCTGGAGATAGTGGGCTTCCCCTCCCTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR TCA 72 bp | CAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTaGGGCATCATTTTCTTAGGGAGTTGGCAACATGGG | + |
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Preference number: 3 (lower is better) Translates to: QNFCRTSSALSL*GIIFLGSWQHG Trigger: CCCATGTTGCCAACTCCCTAAGAAAATGATGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR TCA 72 bp | CTATCTCCAGAGACTGAAGAAGCTGTAAATTACATGTaGCAGACTCTCCCACCCCACCCCCATACTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: LSPETEEAVNYM*QTLPPHPHTEF Trigger: AAATTCAGTATGGGGGTGGGGTGGGAGAGTCTGTCACATGTAATTTACAGCTTCTTCAGTCTCTGGAGATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR GCA 72 bp | GTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTaGAGCCACAGTTCTGAGGAGAAACTCTTCCATGAG | + |
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Preference number: 3 (lower is better) Translates to: VTKERCGGFIFL*SHSSEEKLFHE Trigger: CTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTCTGGAGGGCACACGCTaGTGGGATGGGTCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: TSLPAYPEPCLSPMVASSLEGTR*WDGSTW Trigger: CCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAG...AGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTCAAGACAGCATGCAGTaGAACCAGCGCTGCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: TSLPAYPEPCLSPMVASSQDSMQ*NQRCTA Trigger: CGCCGTGCAGCGCTGGTTGCACTGCATGCTGTCTTG...AGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GTGAGCCCAGAGTGTTATACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCTCGGCTTGCAGCTCCTaGTCCAGGGGCAGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSPECYTSLPAYPEPCLSSACSS*SRGSSA Trigger: GGCACTGCTGCCCCTGGAGCAGGAGCTGCAAGCCGA...GCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGTATAACACTCTGGGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | TGGCTGCTGGGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCCCAGCGCCGTGCCCCTaGTCGGCTGCGTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WLLGIELRTSAEHPVLLAPAPCP*SAASSR Trigger: CCTGGAGGACGCAGCCGATCAGGGGCACGGCGCTGG...GGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GTGAGCCCAGAGTGTTATACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCTTCAGTCAGGGTGGCTaGGTGGTGACGCACCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VSPECYTSLPAYPEPCLSFSQGG*VVTHPA Trigger: CGCTGGGTGCGTCACCACGCAGCCACCCTGACTGAA...GCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGTATAACACTCTGGGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTTGCAGAGTGGGGTTCTaGACACGGCTCTGTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TSLPAYPEPCLSPMVASSCRVGF*TRLCLQ Trigger: TTGAAGACAGAGCCGTGTGCAGAACCCCACTCTGCA...AGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | ACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTTGGGATGGGTCCACTTaGATGATCCCAACGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: TSLPAYPEPCLSPMVASSWDGST*MIPTYS Trigger: GGAGTACGTTGGGATCATCCAAGTGGACCCATCCCA...AGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCACAGTGCAACCAGCGCTaGACGGCGGAGCCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEAQCNQR*TAEPGG Trigger: CCCTCCAGGCTCCGCCGTGCAGCGCTGGTTGCACTG...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | GTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGCCACGTGGAGCCGATaGAGGCAGGCGAAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VTKERCGGFIFLCSHSSEATWSR*RQAKPC Trigger: ACAGGGCTTCGCCTGCCTCCATCGGCTCCACGTGGC...CTCAGAACTGTGGCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | AAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGAGAAAGCATCGCCATCGGCTTaGAGCTCCTGCTCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KERCGGFIFLCSHSSEEKASPSA*SSCSRG Trigger: GCCCCTGGAGCAGGAGCTGCAAGCCGATGGCGATGC...TTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTCCACACCGTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCATCTCAGGATGAAGACTaGCCGCTGGAGGGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEASQDED*PLEGLP Trigger: AGGAAGGCCCTCCAGCGGGCAGTCTTCATCCTGAGA...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCAGAGTGCGGAGATACGTaGTCCCTGCTAGTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEAECGDT*SLLVSW Trigger: CCAAGAGACTAGCAGGGATCACGTATCTCCGCACTC...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | ATATTTCTGTGCAGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTTCCATCCACTCGCTGCTTCTGCCTaGAGCTGTACAACCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IFLCSHSSEEKLFHEFHPLAASA*SCTTAA Trigger: GGCTGCGGTTGTACAGCTTCAGGCAGAAGCAGCGAG...TGGATGGAACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCATCCTTCCTGGCTCGCTaGTTCTGCCTGAAGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEASFLAR*FCLKLY Trigger: GTACAGCTTCAGGCAGAAGCAGCGAGCCAGGAAGGA...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | AGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTTCCATCCACTTCTTGGAGCTATGAAGACTGCCCGCTaGAGGGCCTTCCTCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SHSSEEKLFHEFHPLLGAMKTAR*RAFLCC Trigger: ACAACAGAGGAAGGCCCTCCAGCGGGCAGTCTTCAT...AGCTCCAAGAAGTGGATGGAACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | ATATTTCTGTGCAGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTTCCATCCACTAGTGCGAGCCTTCTaGTCCTCTCCAGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IFLCSHSSEEKLFHEFHPLVRAF*SSPGRR Trigger: TCGCCTGCCTGGAGAGGACCAGAAGGCTCGCACTAG...TGGATGGAACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | GAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTGTTGTTCAGTCAGGGTaGCTGCGTGGTGACGCACCC | + |
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Preference number: 4 (lower is better) Translates to: EVLYFCAATVLRRNSSMSVVQSG*LRGDAP Trigger: GGGTGCGTCACCACGCAGCCACCCTGACTGAACAAC...ACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCATCCCTGCTAGTCTCTTaGCCAGGTGGTAGAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEASLLVS*PGGRRY Trigger: GTACCTTCTACCACCTGGCCAAGAGACTAGCAGGGA...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| 3UTR CAA 72 bp | ATAGATGGTTGTGAGCCACCGTGTGGCTGCTGGGAATaGAACTCAGAACTTCTGCAGAACATCCAGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IDGCEPPCGCWE*NSELLQNIQCS Trigger: AGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCCCAGCAGCCACACGGTGGCTCACAACCATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCAAAGGGTCTGGTAGCCTaGAATTGTGGTGAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSAEHPVLLASEAKGLVA*NCGEAK Trigger: TTTGGCCTCACCACAATTGCAGGCTACCAGACCCTT...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | AAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGAGAAATCCCAGCAGAAGAGATaGCCACAAGGTGTGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: KERCGGFIFLCSHSSEEKSQQKR*PQGVAV Trigger: CACGGCCACACCTTGTGGCCATCTCTTCTGCTGGGA...TTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTCCACACCGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | GTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGACCAGCTTCTGAGGTaGAAACTTCTCCCGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VTKERCGGFIFLCSHSSEDQLLR*KLLPAQ Trigger: CTGTGCCGGGAGAAGTTTCCACCTCAGAAGCTGGTC...CTCAGAACTGTGGCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GTAACTGTAGTAGCTTATGTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGCTCGTCCTTCTGCGCTaGCCGGATCACTTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VTVVAYVTKERCGGFIFLLVLLR*PDHFRG Trigger: GCCCCTGAAGTGATCCGGGCAGCGCAGAAGGACGAG...CAGAAATATAAAACCTCCACACCGTTCTTTTGTCACATAAGCTACTACAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR GCA 90 bp | GTAGTAGCTTATGTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCCTGGCTCGCTGCTTCTaGCTGAAGCTGTACAACCGC | + |
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Preference number: 4 (lower is better) Translates to: VVAYVTKERCGGFIFLCSLARCF*LKLYNR Trigger: GCGGTTGTACAGCTTCAGGCAGAAGCAGCGAGCCAG...GCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCACATAAGCTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | GTAGTAGCTTATGTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCTGTTGCACCACTCGGTaGTGCACTCCCAGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VVAYVTKERCGGFIFLCSCCTTR*CTPSRR Trigger: TCTTCTGCTGGGAGTGCATCACCGAGTGGTGCAACA...GCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCACATAAGCTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CCA 90 bp | GTAGTAGCTTATGTGACAAAAGAACGGTGTGGAGGTTTTATATTTCTGTGCAGCACAACCGCAGCCCCATaGACAGCACCAGATGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VVAYVTKERCGGFIFLCSTTAAP*TAPDAR Trigger: TCTTGCATCTGGTGCTGTCCATGGGGCTGCGGTTGT...GCTGCACAGAAATATAAAACCTCCACACCGTTCTTTTGTCACATAAGCTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | GAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTAGCCTGCAATTGTGGTaGGGCCAAAGTAGGCTATGT | + |
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Preference number: 4 (lower is better) Translates to: EVLYFCAATVLRRNSSMSSLQLW*GQSRLC Trigger: ACATAGCCTACTTTGGCCTCACCACAATTGCAGGCT...ACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR TCA 90 bp | CCAGGTAACTGTAGTAGCTTATGTGACAAAAGAACGGTGTGGAGGTTTTATATTATGGGTCCACTTGGATaGTCCCAACGTACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGNCSSLCDKRTVWRFYIMGPLG*SQRTPP Trigger: GGGAGGAGTACGTTGGGATCATCCAAGTGGACCCAT...AATATAAAACCTCCACACCGTTCTTTTGTCACATAAGCTACTACAGTTACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | GGGTGGCTGCGTGGTGACGCACCCAGCGCCGTGCCCCTGATCGGCTaGGTCCTCCAGGTAGCAGACTGCCCTGTGAAGCCCGGGGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GWLRGDAPSAVPLIG*VLQVADCPVKPGEH Trigger: ATGCTCCCCGGGCTTCACAGGGCAGTCTGCTACCTGGAGGACGCAGCCGATCAGGGGCACGGCGCTGGGTGCGTCACCACGCAGCCACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 90 bp | CGCTGGAGGGCCTTCCTCTGTTGTTCAGTCAGGGTGGCTGCGTGGTaGCGCACCCAGCGCCGTGCCCCTGATCGGCTGCGTCCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RWRAFLCCSVRVAAW*RTQRRAPDRLRPPG Trigger: ACCTGGAGGACGCAGCCGATCAGGGGCACGGCGCTGGGTGCGTCACCACGCAGCCACCCTGACTGAACAACAGAGGAAGGCCCTCCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | TGCAGTGCAACCAGCGCTGCACGGCGGAGCCTGGAGGGCACACGCTaGTGGGATGGGTCCACTTGGATGATCCCAACGTACTCCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: CSATSAARRSLEGTR*WDGSTWMIPTYSSP Trigger: TGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCAGCGCTGGTTGCACTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 90 bp | AACCAGCGCTGCACGGCGGAGCCTGGAGGGCACACGCTGCTGGGATaGGTCCACTTGGATGATCCCAACGTACTCCTCCCCAAGGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: NQRCTAEPGGHTLLG*VHLDDPNVLLPKGL Trigger: CAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCAGCGCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 90 bp | AGTGCAACCAGCGCTGCACGGCGGAGCCTGGAGGGCACACGCTGCTaGGATGGGTCCACTTGGATGATCCCAACGTACTCCTCCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SATSAARRSLEGTRC*DGSTWMIPTYSSPR Trigger: CCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCAGCGCTGGTTGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | GTGGAGCCGATGGAGGCAGGCGAAGCCCTGTCTCAGGATGAAGACTaGCCGCTGGAGGGCCTTCCTCTGTTGTTCAGTCAGGGTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VEPMEAGEALSQDED*PLEGLPLLFSQGGC Trigger: GCAGCCACCCTGACTGAACAACAGAGGAAGGCCCTCCAGCGGGCAGTCTTCATCCTGAGACAGGGCTTCGCCTGCCTCCATCGGCTCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | CGGTGGGATAGATTGCGGTGCAGCCGCCACTCCTTCCTGGCTCGCTaGTTCTGCCTGAAGCTGTACAACCGCAGCCCCATGGACAGCACC | + |
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Preference number: 5 (lower is better) Translates to: RWDRLRCSRHSFLAR*FCLKLYNRSPMDST Trigger: GGTGCTGTCCATGGGGCTGCGGTTGTACAGCTTCAGGCAGAAGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CAA 90 bp | ACTTCCCTTCCAGCCTATCCTGAGCCCTGCCTCAGCCCGATGGTGGCCTCTTCTAGCATCGCCATCGGCTaGCAGCTCCTGCTCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TSLPAYPEPCLSPMVASSSIAIG*QLLLQG Trigger: CCCCTGGAGCAGGAGCTGCAAGCCGATGGCGATGCT...AGAAGAGGCCACCATCGGGCTGAGGCAGGGCTCAGGATAGGCTGGAAGGGAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 90 bp | GGCGGAGCCTGGAGGGCACACGCTGCTGGGATGGGTCCACTTGGATaGTCCCAACGTACTCCTCCCCAAGGGTCTGGTAGCCTGCAATTG | + |
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Preference number: 5 (lower is better) Translates to: GGAWRAHAAGMGPLG*SQRTPPQGSGSLQL Trigger: CAATTGCAGGCTACCAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 90 bp | AGTGGGGTTCTGCACACGGCTCTGTCTTCAAGGGAACTCCTGCGGTaGGATAGATTGCGGTGCAGCCGCCACTCCTTCCTGGCTCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SGVLHTALSSRELLR*DRLRCSRHSFLARC Trigger: GCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAGAACCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | GATAGATTGCGGTGCAGCCGCCACTCCTTCCTGGCTCGCTGCTTCTaGCTGAAGCTGTACAACCGCAGCCCCATGGACAGCACCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: DRLRCSRHSFLARCF*LKLYNRSPMDSTRC Trigger: GCATCTGGTGCTGTCCATGGGGCTGCGGTTGTACAGCTTCAGGCAGAAGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | TGCAGAGTGGGGTTCTGCACACGGCTCTGTCTTCAAGGGAACTCCTaGGGTGGGATAGATTGCGGTGCAGCCGCCACTCCTTCCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: CRVGFCTRLCLQGNS*GGIDCGAAATPSWL Trigger: GAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAGAACCCCACTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 90 bp | TCTCCCGGCACAGGGGACATTCTGTCTTGGTGTTGCACCACTCGGTaGTGCACTCCCAGCAGAAGAGATGGCCACAAGGTGTGGCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: SPGTGDILSWCCTTR*CTPSRRDGHKVWPW Trigger: CCACGGCCACACCTTGTGGCCATCTCTTCTGCTGGGAGTGCATCACCGAGTGGTGCAACACCAAGACAGAATGTCCCCTGTGCCGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 90 bp | GAGCCTTCTGGTCCTCTCCAGGCAGGCGACGAGTGCGGAGATACGTaGTCCCTGCTAGTCTCTTGGCCAGGTGGTAGAAGGTACCATGAA | + |
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Preference number: 5 (lower is better) Translates to: EPSGPLQAGDECGDT*SLLVSWPGGRRYHE Trigger: TTCATGGTACCTTCTACCACCTGGCCAAGAGACTAGCAGGGATCACGTATCTCCGCACTCGTCGCCTGCCTGGAGAGGACCAGAAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 90 bp | GTCTTGGTGTTGCACCACTCGGTGATGCACTCCCAGCAGAAGAGATaGCCACAAGGTGTGGCCGTGGAGTGTCTTCGTTCCTCTAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VLVLHHSVMHSQQKR*PQGVAVECLRSSKH Trigger: ATGCTTAGAGGAACGAAGACACTCCACGGCCACACCTTGTGGCCATCTCTTCTGCTGGGAGTGCATCACCGAGTGGTGCAACACCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CAA 90 bp | GGAATTGAACTCAGAACTTCTGCAGAACATCCAGTGCTCTTAGCCTCTGAGGCACTGCGGTGGGATAGATaGCGGTGCAGCCGCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: GIELRTSAEHPVLLASEALRWDR*RCSRHS Trigger: GGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAG...TGCCTCAGAGGCTAAGAGCACTGGATGTTCTGCAGAAGTTCTGAGTTCAATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 90 bp | TGGAGTGTCTTCGTTCCTCTAAGCATAGGGTGCAGAGTGGGGTTCTaGACACGGCTCTGTCTTCAAGGGAACTCCTGCGGTGGGATAGAT | + |
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Preference number: 5 (lower is better) Translates to: WSVFVPLSIGCRVGF*TRLCLQGNSCGGID Trigger: ATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAGAACCCCACTCTGCACCCTATGCTTAGAGGAACGAAGACACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS-3UTR CAA 90 bp | GAGGTTTTATATTTCTGTGCAGCCACAGTTCTGAGGAGAAACTCTTCCATGAGTCTGGGATGGGTCCACTaGGATGATCCCAACGTACTC | + |
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Preference number: 5 (lower is better) Translates to: EVLYFCAATVLRRNSSMSLGWVH*DDPNVL Trigger: GAGTACGTTGGGATCATCCAAGTGGACCCATCCCAG...ACTCATGGAAGAGTTTCTCCTCAGAACTGTGGCTGCACAGAAATATAAAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | CCGCAGGCCTCCCAGGTAGTACTCGTCCTTCTGCGCTaGCCGGATCACTTCAGGGGCACCCGCCCGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PQASQVVLVLLR*PDHFRGTRPRH Trigger: ATGGCGCGGGCGGGTGCCCCTGAAGTGATCCGGGCAGCGCAGAAGGACGAGTACTACCTGGGAGGCCTGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | CGTGGTGACGCACCCAGCGCCGTGCCCCTGATCGGCTaGGTCCTCCAGGTAGCAGACTGCCCTGTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RGDAPSAVPLIG*VLQVADCPVKP Trigger: GGGCTTCACAGGGCAGTCTGCTACCTGGAGGACGCAGCCGATCAGGGGCACGGCGCTGGGTGCGTCACCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 72 bp | GCCTTCCTCTGTTGTTCAGTCAGGGTGGCTGCGTGGTaGCGCACCCAGCGCCGTGCCCCTGATCGGCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: AFLCCSVRVAAW*RTQRRAPDRLR Trigger: ACGCAGCCGATCAGGGGCACGGCGCTGGGTGCGTCACCACGCAGCCACCCTGACTGAACAACAGAGGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 72 bp | CAGCATGCAGTGCAACCAGCGCTGCACGGCGGAGCCTaGAGGGCACACGCTGCTGGGATGGGTCCACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QHAVQPALHGGA*RAHAAGMGPLG Trigger: TCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCAGCGCTGGTTGCACTGCATGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CAA 90 bp | GCCCTGTCTCAGGATGAAGACTGCCCGCTGGAGGGCCTTCCTCTGTaGTTCAGTCAGGGTGGCTGCGTGGTGACGCACCCAGCGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALSQDEDCPLEGLPL*FSQGGCVVTHPAPC Trigger: GCACGGCGCTGGGTGCGTCACCACGCAGCCACCCTGACTGAACAACAGAGGAAGGCCCTCCAGCGGGCAGTCTTCATCCTGAGACAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | ACCAGCGCTGCACGGCGGAGCCTGGAGGGCACACGCTaGTGGGATGGGTCCACTTGGATGATCCCAACGTAC | + |
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Preference number: 6 (lower is better) Translates to: TSAARRSLEGTR*WDGSTWMIPTY Trigger: GTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCAGCGCTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | CGGTGCAGCCGCCACTCCTTCCTGGCTCGCTGCTTCTaGCTGAAGCTGTACAACCGCAGCCCCATGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: RCSRHSFLARCF*LKLYNRSPMDS Trigger: GCTGTCCATGGGGCTGCGGTTGTACAGCTTCAGGCAGAAGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CAA 90 bp | TGCACGGCGGAGCCTGGAGGGCACACGCTGCTGGGATGGGTCCACTaGGATGATCCCAACGTACTCCTCCCCAAGGGTCTGGTAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CTAEPGGHTLLGWVH*DDPNVLLPKGLVAC Trigger: GCAGGCTACCAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTCCGCCGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | AGATTGCGGTGCAGCCGCCACTCCTTCCTGGCTCGCTaGTTCTGCCTGAAGCTGTACAACCGCAGCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: RLRCSRHSFLAR*FCLKLYNRSPM Trigger: CATGGGGCTGCGGTTGTACAGCTTCAGGCAGAAGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 72 bp | AGCCTGGAGGGCACACGCTGCTGGGATGGGTCCACTTaGATGATCCCAACGTACTCCTCCCCAAGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLEGTRCWDGST*MIPTYSSPRVW Trigger: CCAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CAA 72 bp | GAGCCTGGAGGGCACACGCTGCTGGGATGGGTCCACTaGGATGATCCCAACGTACTCCTCCCCAAGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EPGGHTLLGWVH*DDPNVLLPKGL Trigger: CAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CAA 72 bp | GCTCTGTCTTCAAGGGAACTCCTGCGGTGGGATAGATaGCGGTGCAGCCGCCACTCCTTCCTGGCTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ALSSRELLRWDR*RCSRHSFLARC Trigger: GCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 72 bp | TGGAGGGCACACGCTGCTGGGATGGGTCCACTTGGATaGTCCCAACGTACTCCTCCCCAAGGGTCTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: WRAHAAGMGPLG*SQRTPPQGSGS Trigger: GCTACCAGACCCTTGGGGAGGAGTACGTTGGGATCATCCAAGTGGACCCATCCCAGCAGCGTGTGCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 72 bp | GGTCCTCTCCAGGCAGGCGACGAGTGCGGAGATACGTaGTCCCTGCTAGTCTCTTGGCCAGGTGGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPLQAGDECGDT*SLLVSWPGGRR Trigger: CCTTCTACCACCTGGCCAAGAGACTAGCAGGGATCACGTATCTCCGCACTCGTCGCCTGCCTGGAGAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | TCTTCAAGGGAACTCCTGCGGTGGGATAGATTGCGGTaGAGCCGCCACTCCTTCCTGGCTCGCTGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSRELLRWDRLR*SRHSFLARCFC Trigger: GCAGAAGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | CTCTGTCTTCAAGGGAACTCCTGCGGTGGGATAGATTaGGGTGCAGCCGCCACTCCTTCCTGGCTCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LCLQGNSCGGID*GAAATPSWLAA Trigger: AGCAGCGAGCCAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | GGGTTCTGCACACGGCTCTGTCTTCAAGGGAACTCCTaGGGTGGGATAGATTGCGGTGCAGCCGCCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: GFCTRLCLQGNS*GGIDCGAAATP Trigger: AGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAGAACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 72 bp | CTGCACACGGCTCTGTCTTCAAGGGAACTCCTGCGGTaGGATAGATTGCGGTGCAGCCGCCACTCCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHTALSSRELLR*DRLRCSRHSFL Trigger: CAGGAAGGAGTGGCGGCTGCACCGCAATCTATCCCACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CAA 90 bp | TGTCCGAGAGCAACTCGATCTCTTTCCTCCATTCCAGCCATTTCTTaGCACCCGCTAGGCTGTGCAGCGCTTCACCCGCCGCGCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: CPRATRSLSSIPAIS*HPLGCAALHPPRSA Trigger: TGCGGAGCGCGGCGGGTGAAGCGCTGCACAGCCTAGCGGGTGCAAAGAAATGGCTGGAATGGAGGAAAGAGATCGAGTTGCTCTCGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | ATGGAGGCAGGCGAAGCCCTGTCTCAGGATGAAGACTaGCCGCTGGAGGGCCTTCCTCTGTTGTTCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: MEAGEALSQDED*PLEGLPLLFSQ Trigger: CTGACTGAACAACAGAGGAAGGCCCTCCAGCGGGCAGTCTTCATCCTGAGACAGGGCTTCGCCTGCCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS TCA 72 bp | ACAGGGGACATTCTGTCTTGGTGTTGCACCACTCGGTaGTGCACTCCCAGCAGAAGAGATGGCCACAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TGDILSWCCTTR*CTPSRRDGHKV Trigger: CACCTTGTGGCCATCTCTTCTGCTGGGAGTGCATCACCGAGTGGTGCAACACCAAGACAGAATGTCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS GCA 72 bp | TTCGTTCCTCTAAGCATAGGGTGCAGAGTGGGGTTCTaGACACGGCTCTGTCTTCAAGGGAACTCCTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: FVPLSIGCRVGF*TRLCLQGNSCG Trigger: ACCGCAGGAGTTCCCTTGAAGACAGAGCCGTGTGCAGAACCCCACTCTGCACCCTATGCTTAGAGGAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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| CDS CCA 72 bp | ACTCCCAGCAGAAGAGATGGCCACAAGGTGTGGCCGTaGAGTGTCTTCGTTCCTCTAAGCATAGGGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TPSRRDGHKVWP*SVFVPLSIGCR Trigger: TCTGCACCCTATGCTTAGAGGAACGAAGACACTCCACGGCCACACCTTGTGGCCATCTCTTCTGCTGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103180.4 |
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