Pregenerated sensors for PES1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020430Ensembl transcript IDs: ENSMUST00000020705.5, ENSMUST00000109985.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGAACCCATCTaGATTGGAGAGGATGACACCTCTCCAATCCCAGGGAGGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: STFLELGSPSVPEPI*IGEDDTSPIPGRLL Trigger: CAGAAGCCTCCCTGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR GCA 90 bp | GAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTaGCTGAACCCATCTGGATTGGAGAGGATGACACCTCTCCAATCC | + |
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Preference number: 1 (lower is better) Translates to: EPVSFLPSLNSGVLV*LNPSGLERMTPLQS Trigger: GGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 90 bp | CATTTAATAATAAAAGCTCACCACCCTCACTCCGCAACAGCATCCTaGGCACAGGATGGGCACAGCTATGTAGGAGGCTGTAGAAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HLIIKAHHPHSATAS*AQDGHSYVGGCRKP Trigger: TGGCTTTCTACAGCCTCCTACATAGCTGTGCCCATCCTGTGCTCAGGATGCTGTTGCGGAGTGAGGGTGGTGAGCTTTTATTATTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 90 bp | AAGCATACTGCTTGTGGGAAGGTTCCAGAACTTCCAACCCTAACTTaGGGAAGGAGGTTCAGAGTAGAGCCTGAGCTGAAACAGGAACCA | + |
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Preference number: 1 (lower is better) Translates to: KHTACGKVPELPTLT*GRRFRVEPELKQEP Trigger: TGGTTCCTGTTTCAGCTCAGGCTCTACTCTGAACCTCCTTCCTCAAGTTAGGGTTGGAAGTTCTGGAACCTTCCCACAAGCAGTATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CCA 90 bp | CCTTCTCAGGAACTCCAGCAGGAAGTGAGGGAAGACAGTTGTTTATaGACCATGACTGAATTGGACAAGCATACTGCTTGTGGGAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: PSQELQQEVREDSCL*TMTELDKHTACGKV Trigger: AACCTTCCCACAAGCAGTATGCTTGTCCAATTCAGTCATGGTCCATAAACAACTGTCTTCCCTCACTTCCTGCTGGAGTTCCTGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTCTGGATTGGAGAGGATaGCACCTCTCCAATCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRTCVFSTFLELGSPSVPLDWRG*HLSNPR Trigger: CCTGGGATTGGAGAGGTGTCATCCTCTCCAATCCAG...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTCCGCAACAGCATCCTaGGCACAGGATGGGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLSATAS*AQDGHS Trigger: GCTGTGCCCATCCTGTGCTCAGGATGCTGTTGCGGA...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTATATGAGAGTGCTGGCTaGTGTGTATGTGTGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: NPSPEPVSFLPSLNSGVLYESAG*CVCVFH Trigger: GTGAAACACACATACACACCAGCCAGCACTCTCATA...TAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTTCCGCAACAGCATCCTaGGCACAGGATGGGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCSATAS*AQDGHS Trigger: GCTGTGCCCATCCTGTGCTCAGGATGCTGTTGCGGA...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR GCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGAGGGTTGAGGTCTCTTTaGCCAGGCACTGGCATGAAC | + |
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Preference number: 2 (lower is better) Translates to: VHTMWKCEPYILLHIQCGGLRSL*PGTGMN Trigger: GTTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCC...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | ATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTCTCCAGAACTGCGTTGGGTTaGGGTCTCTTTGCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IHTFVHTMWKCEPYILFSRTALG*GLFAQA Trigger: TGCCTGGGCAAAGAGACCTCAACCCAACGCAGTTCT...GGAGAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACCTTCCAACCCTAACTTaGGGAAGGAGGTTCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: CEPYTLLYIQCGSVSHTHLPTLT*GRRFRV Trigger: TACTCTGAACCTCCTTCCTCAAGTTAGGGTTGGAAG...GTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACATACAATAGAACTGCGTTGGGTTaGGGTCTCTTTGCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LLYIQCGSVSHTHFCTYNRTALG*GLFAQA Trigger: TGCCTGGGCAAAGAGACCTCAACCCAACGCAGTTCT...ATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACAACTCCAGCAGGAAGTaGGGGAAGACAGTTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: CEPYTLLYIQCGSVSHTHNSSRK*GKTVVY Trigger: ATAAACAACTGTCTTCCCTCACTTCCTGCTGGAGTT...GTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGGGTTGAGGTCTCTTTaGCCAGGCACTGGCATGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLYIQCGSVSHTYFCTYNGLRSL*PGTGMN Trigger: GTTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCC...ATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTAAACCTCAACTTAGATaGCTCCTTTCACCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFKPQLR*LLSPSQ Trigger: CTGAGAAGGTGAAAGGAGGCATCTAAGTTGAGGTTT...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTTATGAGAGTGCTGGCTaGTGTGTATGTGTGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: EPYILLHIQCGNASHIHFYESAG*CVCVFH Trigger: GTGAAACACACATACACACCAGCCAGCACTCTCATA...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | CACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HTFVHTMWKCEPYTL*YIQCGSVSHTYFSP Trigger: GGGAGAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTTTATGGACCATGACTaGATTGGACAAGCATACTGC | + |
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Preference number: 2 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLFMDHD*IGQAYC Trigger: GCAGTATGCTTGTCCAATTCAGTCATGGTCCATAAA...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTCCCCAGCTTACTTTTTaGTTATGGTGCTTCATCACA | + |
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Preference number: 2 (lower is better) Translates to: EPYILLHIQCGNASHIHFPQLTF*LWCFIT Trigger: TGTGATGAAGCACCATAACCAAAAAGTAAGCTGGGG...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGCCCCAGCTTACTTTTTaGTTATGGTGCTTCATCACA | + |
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Preference number: 2 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLPQLTF*LWCFIT Trigger: TGTGATGAAGCACCATAACCAAAAAGTAAGCTGGGG...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | CACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HTFVHTMWKCEPYTL*YIQCGSVSHTHFCT Trigger: TGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACATACAATAACTCCAGCAGGAAGTaGGGGAAGACAGTTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LLYIQCGSVSHTHFCTYNNSSRK*GKTVVY Trigger: ATAAACAACTGTCTTCCCTCACTTCCTGCTGGAGTT...ATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR TCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGATACAATGTGGAAGTGTaGGCCATACACACTTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VHTMWKCEPYILLHIQCGYNVEV*AIHTFV Trigger: TACAAAAGTGTGTATGGCTCACACTTCCACATTGTA...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR GCA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATAATTGGACAAGCATACTaGTTGTGGGAAGGTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HTFVHTMWKCEPYILLHIIGQAY*LWEGSR Trigger: TCTGGAACCTTCCCACAAGCAGTATGCTTGTCCAAT...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR GCA 90 bp | CCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATATACACTTTTGTAAACCTCAACTTAGATaGCTCCTTTCACCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PYTLLYIQCGSVSHIHFCKPQLR*LLSPSQ Trigger: CTGAGAAGGTGAAAGGAGGCATCTAAGTTGAGGTTT...ACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTGTACATACAATGTaGAAGTGTGAGCCATATACA | + |
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Preference number: 2 (lower is better) Translates to: CEPYTLLYIQCGSVSHTHFVHTM*KCEPYT Trigger: TGTATATGGCTCACACTTCCACATTGTATGTACAAA...GTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | TACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: YTFVHTMWKCEPYTL*YIQCGSVSHTHFCT Trigger: TGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | CACACTTTTGTACATACAATGTGGAAGTGTGAGCCATATACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HTFVHTMWKCEPYTL*YIQCGSVSHTHFCT Trigger: TGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | CACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTaGTACATACAATGTGGAAGTGTGAGCCATATACACTTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HTFVHTMWKCEPYTL*YIQCGSVSHIHFCT Trigger: TGTACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CAA 90 bp | CATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HTFAHTMWKCEPYTL*YIQCGSVSHTHFCT Trigger: TGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTTTTGTACATACAATGTaGAAGTGTGAGCCATACATA | + |
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Preference number: 2 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCFVHTM*KCEPYI Trigger: TATGTATGGCTCACACTTCCACATTGTATGTACAAA...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACATACAATTTTGTACATACAATGTaGAAGTGTGAGCCATACACA | + |
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Preference number: 2 (lower is better) Translates to: LLYIQCGSVSHTHFCTYNFVHTM*KCEPYT Trigger: TGTGTATGGCTCACACTTCCACATTGTATGTACAAA...ATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CCA 72 bp | GAACTGCGTTGGGTTGAGGTCTCTTTGCCCAGGCACTaGCATGAACCACAAAGGCGGCTGGGGCTAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: ELRWVEVSLPRH*HEPQRRLGLAT Trigger: TGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCCAACGCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CCA 72 bp | CTTGAACTCGGGAGTCCTAGTGTGCCTGAACCCATCTaGATTGGAGAGGATGACACCTCTCCAATCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LELGSPSVPEPI*IGEDDTSPIPG Trigger: CCCTGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGGACTCCCGAGTTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 72 bp | ATAAAAGCTCACCACCCTCACTCCGCAACAGCATCCTaGGCACAGGATGGGCACAGCTATGTAGGAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: IKAHHPHSATAS*AQDGHSYVGGC Trigger: ACAGCCTCCTACATAGCTGTGCCCATCCTGTGCTCAGGATGCTGTTGCGGAGTGAGGGTGGTGAGCTTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 72 bp | GAGCTGAAACAGGAACCAGGCCAGGGCAAGTGTGACTaGAACCCAAGCCCAGAACCTGTGTCTTTTCTACCT | + |
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Preference number: 3 (lower is better) Translates to: ELKQEPGQGKCD*NPSPEPVSFLP Trigger: AGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAGTCACACTTGCCCTGGCCTGGTTCCTGTTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 72 bp | GAGAGGATGACACCTCTCCAATCCCAGGGAGGCTTCTaGACACAGAATCCAATTGGCTGTAAAGATCCAACC | + |
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Preference number: 3 (lower is better) Translates to: ERMTPLQSQGGF*TQNPIGCKDPT Trigger: GGTTGGATCTTTACAGCCAATTGGATTCTGTGTTCAGAAGCCTCCCTGGGATTGGAGAGGTGTCATCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGTGTGTTTCACTAGCTaGCTTCTGCCAAGTCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: PRTCVFSTFLELGSPSVPVCFTS*LLPSPN Trigger: ATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACAC...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR GCA 72 bp | GGTGCTTCATCACAGCAAAGGAAACCTCAACTTAGATaGCTCCTTTCACCTTCTCAGGAACTCCAGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: GASSQQRKPQLR*LLSPSQELQQE Trigger: TTCCTGCTGGAGTTCCTGAGAAGGTGAAAGGAGGCATCTAAGTTGAGGTTTCCTTTGCTGTGATGAAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR TCA 72 bp | GGAAGTGAGGGAAGACAGTTGTTTATGGACCATGACTaGATTGGACAAGCATACTGCTTGTGGGAAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: GSEGRQLFMDHD*IGQAYCLWEGS Trigger: GGAACCTTCCCACAAGCAGTATGCTTGTCCAATTCAGTCATGGTCCATAAACAACTGTCTTCCCTCACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGGGTTGAGGTCTCTTaGCCCAGGCACTGGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFWVEVS*PRHWHE Trigger: TTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCCA...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGTGTGAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATGGACAAGCATACTGCTaGTGGGAAGGTTCCAGAACT | + |
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Preference number: 3 (lower is better) Translates to: WKCEPYTLLYIQCGSVSHGQAYC*WEGSRT Trigger: AGTTCTGGAACCTTCCCACAAGCAGTATGCTTGTCC...ATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR-3UTR CAA 90 bp | TGCGAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACGGACAAGCATACTGCTaGTGGGAAGGTTCCAGAACT | + |
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Preference number: 3 (lower is better) Translates to: CEPYTLLYIQCGSVSHTHGQAYC*WEGSRT Trigger: AGTTCTGGAACCTTCCCACAAGCAGTATGCTTGTCC...GTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| 3UTR CCA 72 bp | GAACTCCAGCAGGAAGTGAGGGAAGACAGTTGTTTATaGACCATGACTGAATTGGACAAGCATACTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ELQQEVREDSCL*TMTELDKHTAC Trigger: ACAAGCAGTATGCTTGTCCAATTCAGTCATGGTCCATAAACAACTGTCTTCCCTCACTTCCTGCTGGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTTGGGTTGAGGTCTCTTaGCCCAGGCACTGGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCWVEVS*PRHWHE Trigger: TTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCCA...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTGAACACAGAATCCAATaGGCTGTAAAGATCCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFEHRIQ*AVKIQP Trigger: TGGTTGGATCTTTACAGCCAATTGGATTCTGTGTTC...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATATACACTTTTGTGTGTGTTTCACTAGCTaGCTTCTGCCAAGTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PYTLLYIQCGSVSHIHFCVCFTS*LLPSPN Trigger: ATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACAC...ACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR GCA 72 bp | TACATACAATGTGGAAGTGTGAGCCATACATACTTTTaGACATACAATGTGGAAATGCGAGCCATATACACT | + |
|
Preference number: 3 (lower is better) Translates to: YIQCGSVSHTYF*TYNVEMRAIYT Trigger: AGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATATACACTTTTGTGAGCCATACACACTTTaGTACATACAATGTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PYTLLYIQCGSVSHIHFCEPYTL*YIQCGS Trigger: ACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC...ACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTGAGCCATATACACTTTaGTACATACAATGTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EPYILLHIQCGNASHIHFEPYTL*YIQCGS Trigger: ACTTCCACATTGTATGTACAAAAGTGTATATGGCTC...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR CCA 72 bp | GAAATGCGAGCCATATACACTTTTGTACATACAATGTaGAAGTGTGAGCCATACACACTTTTGTACATACAA | + |
|
Preference number: 3 (lower is better) Translates to: EMRAIYTFVHTM*KCEPYTLLYIQ Trigger: TTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR TCA 72 bp | AACCATACATACTTTTGTACATACAATGTGGAAGTGTaGGCCATACATACTTTTGCACATACAATGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NHTYFCTYNVEV*AIHTFAHTMWK Trigger: TTTCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATGTATGGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTGCCCAGGCACTGGCATGAACCACAAAGGCGGCTGGGGCTAGCCACATACTCCTGGGCCAGCCGCTaGTTGTCTTCCAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLPRHWHEPQRRLGLATYSWASR*LSSSFT Trigger: TGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCAGGA...GTATGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCCGGGGAAGTACTCTaGCACAGGGAGGAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKPKPRTCVFSTFLELGSPGEVL*HREEEP Trigger: CGGCTCCTCCTCCCTGTGGCAGAGTACTTCCCCGGG...ACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGAACCCATCTGGATTGGAGAGGATGACACCTCTCCAATCCCAGGGAGGCGTGCCGGCCATAACCTaGGGTTTCTTCTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLNPSGLERMTPLQSQGGVPAIT*GFFSSS Trigger: GCTGGAAGAGAAGAAACCCCAGGTTATGGCCGGCAC...GCCTCCCTGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR CAA 72 bp | AACTCGGGAGTCCTAGTGTGCCTGAACCCATCTGGATaGGAGAGGATGACACCTCTCCAATCCCAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGVLVCLNPSG*ERMTPLQSQGG Trigger: GCCTCCCTGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGGACTCCCGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | AACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGGATGCACAGCCGCCTaGAGTCAGGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSPEPVSFLPSLNSGVLGCTAA*SQAGSA Trigger: AGCTGAGCCTGCCTGACTTCAGGCGGCTGTGCATCC...TAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCCCAGGCACTGGCATGAACCACAAAGGCGGCTGGGGCTAGCCACATACCTCACAGCATCATCATaGGCTTTCCTCTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRHWHEPQRRLGLATYLTASS*AFLFSA Trigger: GGCAGAGAAGAGGAAAGCCCATGATGATGCTGTGAG...GTATGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTATGGACAGGAAGACCTaGGGAGGGAGCTTGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPMDRKT*GGSLRR Trigger: CCTGCGCAAGCTCCCTCCCCAGGTCTTCCTGTCCAT...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109985.8 |
||
| 3UTR CAA 72 bp | TGTCAGACGGACTCCTGGATTAAGAACTGCGTTGGGTaGAGGTCTCTTTGCCCAGGCACTGGCATGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CQTDSWIKNCVG*RSLCPGTGMNH Trigger: GTGGTTCATGCCAGTGCCTGGGCAAAGAGACCTCAACCCAACGCAGTTCTTAATCCAGGAGTCCGTCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGGCACAGCTATGTAGGAGGCTGTAGAAAGCCAAGGAAAATGAGGATGGGTAGAGACGGAAGTTaGCAAAGCCCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDGHSYVGGCRKPRKMRMGRDGS*QSPGAW Trigger: CCACGCTCCTGGGCTTTGTCAACTTCCGTCTCTACC...CATCCTCATTTTCCTTGGCTTTCTACAGCCTCCTACATAGCTGTGCCCATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTCCGATCTTCCTCCTGTaGTGTCACCTCCCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPPIFLL*CHLPIS Trigger: ACTGATGGGGAGGTGACAGCACAGGAGGAAGATCGG...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGTGCAATCCATACGATaGGCTGACCCAGCACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPVQSIR*ADPAPQ Trigger: CTGAGGTGCTGGGTCAGCCCATCGTATGGATTGCAC...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTACTCTTCCAAGTGTCCTaGGTCTTCTCCCCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSPEPVSFLPSLNSGVLLFQVS*VFSPLQ Trigger: CTGCAGCGGGGAGAAGACCCAGGACACTTGGAAGAG...TAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGTGCCTGAACCCATCTGGATTGGAGAGGATGACACCTCTCCAATCCCACGGGCCTTGTCCTCTTaGCCTTTTTCTCAGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVPEPIWIGEDDTSPIPRALSS*PFSQTS Trigger: TGAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCG...TGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGTGGGTAGTGAAGGTTaGGTGACTGGTAGAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPVGSEG*VTGRDG Trigger: TCCGTCTCTACCAGTCACTCAACCTTCACTACCCAC...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGTGTGCCTGAACCCATCTGGATTGGAGAGGATGACACCTCTCCAATCCCACTTGTGCTTTTCCTGTaGCTCCAGCTCTTTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSVPEPIWIGEDDTSPIPLVLFL*LQLFLP Trigger: CGGAAGAAAGAGCTGGAGGCACAGGAAAAGCACAAG...TGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTCGGGCCTTGTCCTCTTaGCCTTTTTCTCAGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPRALSS*PFSQTS Trigger: TGAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCG...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTATGTGTGTTTCACTAGCTTGCTTCTGCCAAGTCCAAATCTCAGTGAGGGTAGAGACGGAAGTTaGCAAAGCCCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVYVCFTSLLLPSPNLSEGRDGS*QSPGAW Trigger: CCACGCTCCTGGGCTTTGTCAACTTCCGTCTCTACC...CTCACTGAGATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACACATACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGGCACAGCTATGTAGGAGGCTGTAGAAAGCCAAGGAAAATGAGGATGGTGGGTAGTGAAGGTTaGGTGACTGGTAGAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDGHSYVGGCRKPRKMRMVGSEG*VTGRDG Trigger: TCCGTCTCTACCAGTCACTCAACCTTCACTACCCAC...CATCCTCATTTTCCTTGGCTTTCTACAGCCTCCTACATAGCTGTGCCCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCTGGTGGGTGATGCATaGGTCTGTGACGTCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKPKPRTCVFSTFLELGSLVGDA*VCDVIG Trigger: ACCTATGACGTCACAGACTCATGCATCACCCACCAG...ACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGCTTGTGCTTTTCCTGTaGCTCCAGCTCTTTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PEPVSFLPSLNSGVLVCLLVLFL*LQLFLP Trigger: CGGAAGAAAGAGCTGGAGGCACAGGAAAAGCACAAG...CAGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGGCCGGTCAACAATCTaGTGGGTGATGCATGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSPEPVSFLPSLNSGVLGRSTI*WVMHES Trigger: AGACTCATGCATCACCCACCAGATTGTTGACCGGCC...TAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTATGTGTGTTTCACTAGCTTGCTTCTGCCAAGTCCAAATCTCAGTGAGCTCAGATACGAAGGGTaGAAGATGTGGGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVYVCFTSLLLPSPNLSELRYEG*KMWGQL Trigger: CAGCTGCCCCCACATCTTTCACCCTTCGTATCTGAG...CTCACTGAGATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACACATACACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGTAAAATGTCCGGGCTaGTGTGGAACCCTTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPVKCPG*CGTLVN Trigger: GTTAACAAGGGTTCCACAGCAGCCCGGACATTTTAC...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGCTGATCTTTGTCTCTaGTTGGGCTTGACCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRTCVFSTFLELGSPSVPADLCL*LGLTFK Trigger: CTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGC...AGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTCCCGGGGAAGTACTCTaGCACAGGGAGGAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPYILLHIQCGNASHIHFPGEVL*HREEEP Trigger: CGGCTCCTCCTCCCTGTGGCAGAGTACTTCCCCGGG...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGTATGTGTGTTTCACTAGCTTGCTTCTGCCAAGTCCAAATCTCAGTGAGTCTCTGCCAGCTTGTTaGCCTCTCGGATTTTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVYVCFTSLLLPSPNLSESLPAC*PLGFCA Trigger: GGCGCAAAATCCGAGAGGCCAACAAGCTGGCAGAGA...CTCACTGAGATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACACATACACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | AACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTAAAATGTCCGGGCTaGTGTGGAACCCTTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPSPEPVSFLPSLNSGVLVKCPG*CGTLVN Trigger: GTTAACAAGGGTTCCACAGCAGCCCGGACATTTTAC...TAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTGCTGATCTTTGTCTCTaGTTGGGCTTGACCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPKPRTCVFSTFLELGSADLCL*LGLTFK Trigger: CTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGC...ACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGAGGGTCTTCTCCCCGCTaGAGAGCCAGGAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHTMWKCEPYILLHIQCGGSSPR*RARSFS Trigger: GCTGAAGCTCCTGGCTCTGCAGCGGGGAGAAGACCC...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGGGGTCTTCTCCCCGCTaGAGAGCCAGGAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLGSSPR*RARSFS Trigger: GCTGAAGCTCCTGGCTCTGCAGCGGGGAGAAGACCC...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATGGGCACAGCTATGTAGGAGGCTGTAGAAAGCCAAGGAAAATGAGGATGTTGACCTTCAAGCTTTaGTGGGTAGTGAAGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QDGHSYVGGCRKPRKMRMLTFKL*WVVKVE Trigger: CTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAA...CATCCTCATTTTCCTTGGCTTTCTACAGCCTCCTACATAGCTGTGCCCATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGTATGTGTGTTTCACTAGCTTGCTTCTGCCAAGTCCAAATCTCAGTGAGCTCACAGCATCATCATaGGCTTTCCTCTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVYVCFTSLLLPSPNLSELTASS*AFLFSA Trigger: GGCAGAGAAGAGGAAAGCCCATGATGATGCTGTGAG...CTCACTGAGATTTGGACTTGGCAGAAGCAAGCTAGTGAAACACACATACACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATAGGATGCACAGCCGCCTaGAGTCAGGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTFVHTMWKCEPYILLHIGCTAA*SQAGSA Trigger: AGCTGAGCCTGCCTGACTTCAGGCGGCTGTGCATCC...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTGTGCCGGCCATAACCTaGGGTTTCTTCTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFVPAIT*GFFSSS Trigger: GCTGGAAGAGAAGAAACCCCAGGTTATGGCCGGCAC...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTCTCTGCCAGCTTGTTaGCCTCTCGGATTTTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFSLPAC*PLGFCA Trigger: GGCGCAAAATCCGAGAGGCCAACAAGCTGGCAGAGA...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGGCAGGAACTCCACAGTaGGCCTACGGCACAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLAGTPQ*AYGTTE Trigger: TTCAGTTGTGCCGTAGGCTCACTGTGGAGTTCCTGC...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTGCAGGAACTCCACAGTaGGCCTACGGCACAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPYILLHIQCGNASHIHFAGTPQ*AYGTTE Trigger: TTCAGTTGTGCCGTAGGCTCACTGTGGAGTTCCTGC...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGAGTCTCTGCTTGGGCTTaGCCTTCAAGCTTTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTMWKCEPYILLHIQCGVSAWA*PSSFGG Trigger: CCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGAC...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTGTCTCTGCTTGGGCTTaGCCTTCAAGCTTTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFVSAWA*PSSFGG Trigger: CCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGAC...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTCTGGTGGGTGATGCATaGGTCTGTGACGTCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFLVGDA*VCDVIG Trigger: ACCTATGACGTCACAGACTCATGCATCACCCACCAG...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTCTCAGATACGAAGGGTaGAAGATGTGGGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPYILLHIQCGNASHIHFLRYEG*KMWGQL Trigger: CAGCTGCCCCCACATCTTTCACCCTTCGTATCTGAG...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTCCGATCTTCCTCCTGTaGTGTCACCTCCCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFPIFLL*CHLPIS Trigger: ACTGATGGGGAGGTGACAGCACAGGAGGAAGATCGG...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTTTCTCTTCCAGCCTGTaGTGCTCCAAGGCCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPYILLHIQCGNASHIHFFSSSL*CSKAER Trigger: CCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAA...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTTCTCTTCCAGCCTGTaGTGCTCCAAGGCCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLFSSSL*CSKAER Trigger: CCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAA...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGAACTCTCGGAACTTGTTaGCGATGGGCTCATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHTMWKCEPYILLHIQCGTLGTC*RWAHGG Trigger: TCCTCCATGAGCCCATCGTCAACAAGTTCCGAGAGT...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATATCCTGGGCCAGCCGCTaGTTGTCTTCCAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HTFVHTMWKCEPYILLHISWASR*LSSSFT Trigger: TGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCAGGA...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTGTGCAATCCATACGATaGGCTGACCCAGCACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCVQSIR*ADPAPQ Trigger: CTGAGGTGCTGGGTCAGCCCATCGTATGGATTGCAC...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTGGCCGGTCAACAATCTaGTGGGTGATGCATGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFGRSTI*WVMHES Trigger: AGACTCATGCATCACCCACCAGATTGTTGACCGGCC...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACTCTTCCAAGTGTCCTaGGTCTTCTCCCCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTFVHTMWKCEPYILLHILFQVS*VFSPLQ Trigger: CTGCAGCGGGGAGAAGACCCAGGACACTTGGAAGAG...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACTCTCGGAACTTGTTaGCGATGGGCTCATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCTLGTC*RWAHGG Trigger: TCCTCCATGAGCCCATCGTCAACAAGTTCCGAGAGT...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR TCA 90 bp | CCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATATACACTTTTGTGAAGAGGAAGCACATTaGCAGGGCATCATCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYTLLYIQCGSVSHIHFCEEEAH*QGIIEV Trigger: GACCTCGATGATGCCCTGTCAATGTGCTTCCTCTTC...ACAAAAGTGTATATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGACGGTCAACAATCTGGTaGGTGATGCATGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTMWKCEPYILLHIQCGRSTIW*VMHESV Trigger: CACAGACTCATGCATCACCCACCAGATTGTTGACCG...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTCAAAGAGTTTCTTGTaGTTTTCCTGTGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFSKSFL*FSCASS Trigger: GCTGGAGGCACAGGAAAAGCACAAGAAACTCTTTGA...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTTACGGCACAACTGAATaGTCTGCACATGACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPYILLHIQCGNASHIHFYGTTE*SAHDTC Trigger: GCAAGTGTCATGTGCAGACCATTCAGTTGTGCCGTA...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR CAA 72 bp | GCACATACAATGTGGAAATGCGAGCCATATACACTTTaGTACATACAATGTGGAAGTGTGAGCCATACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AHTMWKCEPYTL*YIQCGSVSHTH Trigger: GTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCATTTCCACATTGTATGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | ATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTCTCCTACGGCACAACTGAATaGTCTGCACATGACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHTFVHTMWKCEPYILFSYGTTE*SAHDTC Trigger: GCAAGTGTCATGTGCAGACCATTCAGTTGTGCCGTA...GGAGAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CCA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACGGTCAACAATCTGGTaGGTGATGCATGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTFVHTMWKCEPYILLHIRSTIW*VMHESV Trigger: CACAGACTCATGCATCACCCACCAGATTGTTGACCG...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTACATACAATGCTCTCAGAGTCCAATaGATATGTGTCCTCGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLYIQCGSVSHTHFCTYNALRVQ*ICVLAD Trigger: ATCAGCGAGGACACATATGCATTGGACTCTGAGAGC...ATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR CAA 72 bp | TCCAATCCCAGGGAGGCTTCTGAACACAGAATCCAATaGGCTGTAAAGATCCAACCATTTAATAATAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPREASEHRIQ*AVKIQPFNNKS Trigger: GCTTTTATTATTAAATGGTTGGATCTTTACAGCCAATTGGATTCTGTGTTCAGAAGCCTCCCTGGGATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| 3UTR CAA 72 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTaGCACATACAATGTGGAAATGCGAGCCATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTMWKCEPYIL*HIQCGNASHIH Trigger: GTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS GCA 90 bp | ACAGTGCCGGCCATAACCTGGGGTTTCTTCTCTTCCAGCCTGTGCTaGTCCAAGGCCGAAAGGTGCACCTCCTCCTCCTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVPAITWGFFSSSLC*SKAERCTSSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCAGGTTATGGCCGGCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS GCA 90 bp | TTCACAGTGCCGGCCATAACCTGGGGTTTCTTCTCTTCCAGCCTGTaGTGCTCCAAGGCCGAAAGGTGCACCTCCTCCTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTVPAITWGFFSSSL*CSKAERCTSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCAGGTTATGGCCGGCACTGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGTGCCTGACCTGGGGAGGGAGCTaGCGCAGGGCTCGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PEPVSFLPSLNSGVLVCLTWGGS*RRARAV Trigger: CACTGCCCGAGCCCTGCGCAAGCTCCCTCCCCAGGT...CAGGCACACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCCCAGGCACTGGCATGAACCACAAAGGCGGCTGGGGCTAGCCACATACACGGGCCTTGTCCTCTaGGCCTTTTTCTCAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRHWHEPQRRLGLATYTGLVL*AFFSDL Trigger: GAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCGT...GTATGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS GCA 90 bp | TGGGGTTTCTTCTCTTCCAGCCTGTGCTGCTCCAAGGCCGAAAGGTaGACCTCCTCCTCCTCCTCCTCCTCCGATTCAACTTCCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: WGFFSSSLCCSKAER*TSSSSSSSDSTSTS Trigger: AGATGTGGAAGTTGAATCGGAGGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGTGCCTGAACCCATCTGGATTGGAGAGGATGACACCTCTCCAATCCCATGGGCCAGCCGCTGCTaGTCTTCCAGCTTCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSVPEPIWIGEDDTSPIPWASRC*SSSFTV Trigger: CACTGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCA...TGGGATTGGAGAGGTGTCATCCTCTCCAATCCAGATGGGTTCAGGCACACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCCCAGGCACTGGCATGAACCACAAAGGCGGCTGGGGCTAGCCACATACCCTTCAAAGAGTTTCTaGTGCTTTTCCTGTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRHWHEPQRRLGLATYPSKSF*CFSCAS Trigger: GGAGGCACAGGAAAAGCACAAGAAACTCTTTGAAGG...GTATGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCCCAGGCACTGGCATGAACCACAAAGGCGGCTGGGGCTAGCCACATACGCTGCTGTGGAACCCTaGTTAACTTTCTTCTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRHWHEPQRRLGLATYAAVEP*LTFFLC Trigger: GCATAAGAAGAAAGTTAACAAGGGTTCCACAGCAGC...GTATGTGGCTAGCCCCAGCCGCCTTTGTGGTTCATGCCAGTGCCTGGGCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTTTCTCTGCCAGCTTGTaGGCCTCTCGGATTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PKPRTCVFSTFLELGSPSFSASL*ASRILR Trigger: GCGCAAAATCCGAGAGGCCAACAAGCTGGCAGAGAA...ACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTGTGAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATGCCAATGATGGGGGTTaGCTGCCCCGGCCGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WKCEPYTLLYIQCGSVSHANDGG*LPRPVN Trigger: GTTGACCGGCCGGGGCAGCAAACCCCCATCATTGGC...ATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTCACACTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTTTCTCTGCCAGCTTGTaGGCCTCTCGGATTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKPKPRTCVFSTFLELGSFSASL*ASRILR Trigger: GCGCAAAATCCGAGAGGCCAACAAGCTGGCAGAGAA...ACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAACCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTACGGGCCTTGTCCTCTaGGCCTTTTTCTCAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKPKPRTCVFSTFLELGSTGLVL*AFFSDL Trigger: GAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCGT...ACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGGTTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS GCA 90 bp | GCTCTCAGAGTCCAATGCATATGTGTCCTCGCTGATCTTTGTCTCTaGTTGGGCTTGACCTTCAAGCTTTGGTGGGTAGTGAAGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALRVQCICVLADLCL*LGLTFKLWWVVKVE Trigger: CTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGCGAGGACACATATGCATTGGACTCTGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCATACACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTATGGACAGGAAGACCTaGCGCAGGGCTCGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFMDRKT*RRARAV Trigger: CACTGCCCGAGCCCTGCGCAAGGTCTTCCTGTCCAT...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTGTATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020705.5 |
||
| CDS-3UTR CAA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGAGCCAATGATGGGGGTTaGCTGCCCCGGCCGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHTMWKCEPYILLHIQCGANDGG*LPRPVN Trigger: GTTGACCGGCCGGGGCAGCAAACCCCCATCATTGGC...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCCCAGAACCTGTGTCTTTTCTACCTTCCTTGAACTCGGGAGTCCTAGTGCTGCTGTGGAACCCTaGTTAACTTTCTTCTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: PKPRTCVFSTFLELGSPSAAVEP*LTFFLC Trigger: GCATAAGAAGAAAGTTAACAAGGGTTCCACAGCAGC...ACTAGGACTCCCGAGTTCAAGGAAGGTAGAAAAGACACAGGTTCTGGGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | CATACTTTTGTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATATGGGCCAGCCGCTGCTaGTCTTCCAGCTTCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HTFVHTMWKCEPYILLHIWASRC*SSSFTV Trigger: CACTGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCA...TATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTACAAAAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCATACATACTTTTGCACATACAATGTGGAAATGCGAGCCATATACACTTTCCGATACACAGAGACTaGTCCCAGGATACATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPYILLHIQCGNASHIHFPIHRD*SQDTSP Trigger: TGGGGATGTATCCTGGGACAAGTCTCTGTGTATCGG...AAAGTGTATATGGCTCGCATTTCCACATTGTATGTGCAAAAGTATGTATGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS-3UTR CAA 90 bp | GTACATACAATGTGGAAGTGTGAGCCATACATACTTTTGCACATACAATGTGGACCGATACACAGAGACTaGTCCCAGGATACATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VHTMWKCEPYILLHIQCGPIHRD*SQDTSP Trigger: TGGGGATGTATCCTGGGACAAGTCTCTGTGTATCGG...TCCACATTGTATGTGCAAAAGTATGTATGGCTCACACTTCCACATTGTATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS-3UTR CAA 90 bp | GAGCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTCTCTTCTCTGCCAGCTaGTTGGCCTCTCGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: EPYTLLYIQCGSVSHTHFLFSAS*LASRIL Trigger: CAAAATCCGAGAGGCCAACAAGCTGGCAGAGAAGAG...AAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS-3UTR CAA 90 bp | CCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGTCTCTTCTCTGCCAGCTaGTTGGCCTCTCGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: PYTLLYIQCGSVSHTHFCLFSAS*LASRIL Trigger: CAAAATCCGAGAGGCCAACAAGCTGGCAGAGAAGAG...ACAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS-3UTR CAA 90 bp | GCCATATACACTTTTGTACATACAATGTGGAAGTGTGAGCCATACACACTTTTGCCTTCAAAGAGTTTCTaGTGCTTTTCCTGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AIYTFVHTMWKCEPYTLLPSKSF*CFSCAS Trigger: GGAGGCACAGGAAAAGCACAAGAAACTCTTTGAAGG...CAAAAGTGTGTATGGCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS GCA 72 bp | TTCTCTTCCAGCCTGTGCTGCTCCAAGGCCGAAAGGTaGACCTCCTCCTCCTCCTCCTCCTCCGATTCAACT | + |
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Preference number: 6 (lower is better) Translates to: FSSSLCCSKAER*TSSSSSSSDST Trigger: AGTTGAATCGGAGGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS GCA 72 bp | GCTCCACAGCATTCCATTCGCTCTTTCCATAGGCTTTaGGGAGCTTCCGAACAAACACCTTGTACTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: APQHSIRSFHRL*GASEQTPCTLG Trigger: TCCGAGAGTACAAGGTGTTTGTTCGGAAGCTCCGCAAAGCCTATGGAAAGAGCGAATGGAATGCTGTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS TCA 72 bp | TTGACCTTCAAGCTTTGGTGGGTAGTGAAGGTTGAGTaGCTGGTAGAGACGGAAGTTGACAAAGCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LTFKLWWVVKVE*LVETEVDKAQE Trigger: CTCCTGGGCTTTGTCAACTTCCGTCTCTACCAGTCACTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS GCA 72 bp | GTCCAATGCATATGTGTCCTCGCTGATCTTTGTCTCTaGTTGGGCTTGACCTTCAAGCTTTGGTGGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VQCICVLADLCL*LGLTFKLWWVV Trigger: CACTACCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGCGAGGACACATATGCATTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS CAA 72 bp | CGGAGCTTCCGAACAAACACCTTGTACTCTCGGAACTaGTTGACGATGGGCTCATGGAGGAGGAATTTAATG | + |
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Preference number: 6 (lower is better) Translates to: RSFRTNTLYSRN*LTMGSWRRNLM Trigger: CATTAAATTCCTCCTCCATGAGCCCATCGTCAACAAGTTCCGAGAGTACAAGGTGTTTGTTCGGAAGCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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| CDS CAA 72 bp | AGCTTCCGAACAAACACCTTGTACTCTCGGAACTTGTaGACGATGGGCTCATGGAGGAGGAATTTAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFRTNTLYSRNL*TMGSWRRNLMS Trigger: AGACATTAAATTCCTCCTCCATGAGCCCATCGTCAACAAGTTCCGAGAGTACAAGGTGTTTGTTCGGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020705.5 ENSMUST00000109985.8 |
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