Pregenerated sensors for PERM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078486Ensembl transcript IDs: ENSMUST00000105572.3
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGGAGGCCCTAGCCAGCCAAGCCTGCCTTTCAATAGGGCAGACTaGCTCCCTCTAGCTTTGAAGACACTTGGTAGCCTCATCTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: LGGPSQPSLPFNRAD*LPLALKTLGSLISA Trigger: GGCCGAGATGAGGCTACCAAGTGTCTTCAAAGCTAGAGGGAGGCAGTCTGCCCTATTGAAAGGCAGGCTTGGCTGGCTAGGGCCTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 90 bp | GGGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTaGGTTCGTCTTCGTGCTCCATGCTTCACCAGGCCAGCCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GIKEWREEQHLVLVT*VRLRAPCFTRPAWL Trigger: GAGCCAGGCTGGCCTGGTGAAGCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR TCA 90 bp | TCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAACCTAGTCACTaGCTTAGGCCAGGCTTGCACAAGCTGTGCAGGGATCAGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: SPLGRLRTTALEPSH*LRPGLHKLCRDQGS Trigger: TGATCCCTGATCCCTGCACAGCTTGTGCAAGCCTGGCCTAAGTCAGTGACTAGGTTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 90 bp | GCAGCCAGAGTAATCCACCATCCTAAGGACCTTTATCTGCTATCTTaGGTAGAACCCCACCCTGAACTGACTATCACTGTGTCACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AARVIHHPKDLYLLS*VEPHPELTITVSPQ Trigger: CTGAGGTGACACAGTGATAGTCAGTTCAGGGTGGGGTTCTACCCAAGATAGCAGATAAAGGTCCTTAGGATGGTGGATTACTCTGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 90 bp | GATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTTTCAGGTATaGAAAATGCCCTTGGCCTTAGTCAGTGACTGGACCCTTAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: DILLPSSLLSAHFQV*KMPLALVSDWTLRL Trigger: CAACCTAAGGGTCCAGTCACTGACTAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 90 bp | TTAGTATCAGGAGGCAATCCTTCCATAGGATGCTATTACATTCTATaGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LVSGGNPSIGCYYIL*ISCPGLLENIQPCP Trigger: GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCCTGATACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | TTCGCCTACCTTCCCACTCTGCAACTTCTCCCAACCTTGGCTTCCTTCAAGCTCGGCTTGCACAAGCTGTaGAGGGATCAGGGATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FAYLPTLQLLPTLASFKLGLHKL*RDQGSG Trigger: CCCTGATCCCTGATCCCTGCACAGCTTGTGCAAGCC...GAGCTTGAAGGAAGCCAAGGTTGGGAGAAGTTGCAGAGTGGGAAGGTAGGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTCGTCTTCGTGCTCCATaGTTCACCAGGCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: DRDQRVERRATSCPCHLGRLRAP*FTRPAW Trigger: CCAGGCTGGCCTGGTGAAGCATGGAGCACGAAGACG...ACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CAA 90 bp | CTCAGTCCCTTCGCCTACCTTCCCACTCTGCAACTTCTCCCAACCTaGGCTTCCTTCAAGCTCCCTTTAGTATCAGGAGGCAATCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LSPFAYLPTLQLLPT*ASFKLPLVSGGNPS Trigger: GGAAGGATTGCCTCCTGATACTAAAGGGAGCTTGAAGGAAGCCAAGGTTGGGAGAAGTTGCAGAGTGGGAAGGTAGGCGAAGGGACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAGACTTAGGCCAGGCTTaGACAAGCTGTGCAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: GETIKGFTIRKAENHCPRDLGQA*TSCAGI Trigger: GATCCCTGCACAGCTTGTGCAAGCCTGGCCTAAGTC...TCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CAA 90 bp | CCCAGCTCCTTGCTTAGTGCCCACTTTCAGGTATGGAAAATGCCCTaGGCCTTAGTCAGTGACTGGACCCTTAGGTTGAGTCTAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: PSSLLSAHFQVWKMP*ALVSDWTLRLSLSK Trigger: TTTACTTAGACTCAACCTAAGGGTCCAGTCACTGACTAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR CCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCCATACCCTAGAGCAATaGTTTTCAACCTGTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: YILWISCPGLLENIQPCPHTLEQ*FSTCGT Trigger: TGTGCCACAGGTTGAAAACCATTGCTCTAGGGTATG...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CAA 90 bp | GTATGGAAAATGCCCTTGGCCTTAGTCAGTGACTGGACCCTTAGGTaGAGTCTAAGTAAATCAGTACCAAGGGCACTGTCTCCTTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VWKMPLALVSDWTLR*SLSKSVPRALSPSY Trigger: GTAGGAAGGAGACAGTGCCCTTGGTACTGATTTACTTAGACTCAACCTAAGGGTCCAGTCACTGACTAAGGCCAAGGGCATTTTCCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | TTCGCCTACCTTCCCACTCTGCAACTTCTCCCAACCTTGGCTTCCTTCAAGCTCAGACAAAAGGCAGGGTaGCCATTTCTTCATATAAGT | + |
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Preference number: 2 (lower is better) Translates to: FAYLPTLQLLPTLASFKLRQKAG*PFLHIS Trigger: ACTTATATGAAGAAATGGGCACCCTGCCTTTTGTCT...GAGCTTGAAGGAAGCCAAGGTTGGGAGAAGTTGCAGAGTGGGAAGGTAGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CAA 90 bp | CCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTaGCTTAGTGCCCACTTTCAGGTATGGAAAATGCCCTTGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: PVVFPCNSDILLPSS*LSAHFQVWKMPLAL Trigger: TAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTGCCCACTTTCAGGTATaGAAAATGCCCTTGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LEQWFSTCGTEPSSSKNIAHFQV*KMPLAL Trigger: TAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGC...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTTGTCTCCTTCCTACATaGCTTAGAAGACAGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: FFLAILISYYPAPCLVPTCLLPT*LRRQGS Trigger: TGATCCCTGTCTTCTAAGGCATGTAGGAAGGAGACA...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTTTCAAATTTGCTAGGTaGCCTGTAGTTTTTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LEQWFSTCGTEPSSSKNIFKFAR*PVVFPC Trigger: GCAAGGAAAAACTACAGGGCACCTAGCAAATTTGAA...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR TCA 72 bp | GGAAGGCTGAGAACCACTGCCCTAGAACCTAGTCACTaGCTTAGGCCAGGCTTGCACAAGCTGTGCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: GRLRTTALEPSH*LRPGLHKLCRD Trigger: ATCCCTGCACAGCTTGTGCAAGCCTGGCCTAAGTCAGTGACTAGGTTCTAGGGCAGTGGTTCTCAGCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR GCA 72 bp | CCTAGCCAGCCAAGCCTGCCTTTCAATAGGGCAGACTaGCTCCCTCTAGCTTTGAAGACACTTGGTAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSQPSLPFNRAD*LPLALKTLGSL Trigger: GAGGCTACCAAGTGTCTTCAAAGCTAGAGGGAGGCAGTCTGCCCTATTGAAAGGCAGGCTTGGCTGGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGATCAGGGATCAGGGCCTaGGAGGCCCTAGCCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: GETIKGFTIRKAENHCPRSGIRA*EALASQ Trigger: TTGGCTGGCTAGGGCCTCCAAGGCCCTGATCCCTGA...TCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR GCA 72 bp | ATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTaGCCCATAGATCCCACATTGCAGAAGCCCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: ISCPGLLENIQP*PIDPTLQKPQK Trigger: TTTCTGGGGCTTCTGCAATGTGGGATCTATGGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR TCA 72 bp | GGACCTTTATCTGCTATCTTGGGTAGAACCCCACCCTaGACTGACTATCACTGTGTCACCTCAGTCCCTTCG | + |
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Preference number: 3 (lower is better) Translates to: GPLSAILGRTPP*TDYHCVTSVPS Trigger: CGAAGGGACTGAGGTGACACAGTGATAGTCAGTTCAGGGTGGGGTTCTACCCAAGATAGCAGATAAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 72 bp | TTACCCAGCTCCTTGCTTAGTGCCCACTTTCAGGTATaGAAAATGCCCTTGGCCTTAGTCAGTGACTGGACC | + |
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Preference number: 3 (lower is better) Translates to: LPSSLLSAHFQV*KMPLALVSDWT Trigger: GGTCCAGTCACTGACTAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGATTTTATTGGTGCTGTGTTCCCCTCTGAGCAGCCAGAGTAATCCACCAGAGAAGAGCAACATCTaGTCCTTGTCACCTGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: KEILLVLCSPLSSQSNPPEKSNI*SLSPGF Trigger: GAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTC...TGGTGGATTACTCTGGCTGCTCAGAGGGGAACACAGCACCAATAAAATCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR TCA 72 bp | ACGAGAAAGAGATTTTATTGGTGCTGTGTTCCCCTCTaGGCAGCCAGAGTAATCCACCATCCTAAGGACCTT | + |
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Preference number: 3 (lower is better) Translates to: TRKRFYWCCVPL*AARVIHHPKDL Trigger: AAGGTCCTTAGGATGGTGGATTACTCTGGCTGCTCAGAGGGGAACACAGCACCAATAAAATCTCTTTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR GCA 72 bp | GTAAATCAGTACCAAGGGCACTGTCTCCTTCCTACATaGCTTAGAAGACAGGGATCAAAGAGTGGAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VNQYQGHCLLPT*LRRQGSKSGEK Trigger: CTTCTCTCCACTCTTTGATCCCTGTCTTCTAAGGCATGTAGGAAGGAGACAGTGCCCTTGGTACTGATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTAGCAACATCTTGTCCTaGTCACCTGGGTTCGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LEQWFSTCGTEPSSSKNISNILS*SPGFVF Trigger: GAAGACGAACCCAGGTGACAAGGACAAGATGTTGCT...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CCA 72 bp | GGAGGCAATCCTTCCATAGGATGCTATTACATTCTATaGATATCCTGTCCGGGGCTCTTGGAGAATATCCAA | + |
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Preference number: 3 (lower is better) Translates to: GGNPSIGCYYIL*ISCPGLLENIQ Trigger: TTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR GCA 72 bp | TTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTaGTTAGTGCCCACTTTCAGGTATGGAAAATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: FLAILISYYPAP*LVPTFRYGKCP Trigger: AGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR GCA 72 bp | CCTTGTTGCTTTGACACTTACTGTAGAGCCCTCTTCTaGTGCTCATTTTTATTTATGATCAGACAAAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PCCFDTYCRALF*CSFLFMIRQKA Trigger: TGCCTTTTGTCTGATCATAAATAAAAATGAGCAGCAGAAGAGGGCTCTACAGTAAGTGTCAAAGCAACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | TTCGCCTACCTTCCCACTCTGCAACTTCTCCCAACCTTGGCTTCCTTCAAGCTCCCTTGGGAAACCAGCTaGCCAGTGAAGAGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FAYLPTLQLLPTLASFKLPWETS*PVKRGG Trigger: CCCACCCCTCTTCACTGGGCAGCTGGTTTCCCAAGG...GAGCTTGAAGGAAGCCAAGGTTGGGAGAAGTTGCAGAGTGGGAAGGTAGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCTGTCCGGGGGAACAGAGGGGCCTCTaGCTGTGTGGACGTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GGNPSIGCYYILWISCPGEQRGL*LCGRAG Trigger: GCCGGCACGTCCACACAGTCAGAGGCCCCTCTGTTC...CCCCGGACAGGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTCGTGCTCCATGCACAGGAGGAGGCAGGTaGTTGAGGATCCGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: REEQHLVLVTWVRLRAPCTGGGR*LRIRGW Trigger: CCAGCCTCGGATCCTCAAGCACCTGCCTCCTCCTGT...GCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCGCCGCAGGCTGTCTGTaGCCAAATCCTTCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: YILWISCPGLLENIQPCPAAGCL*PNPSSV Trigger: CACTGAGGAAGGATTTGGGCACAGACAGCCTGCGGC...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | GATCCCACATTGCAGAAGCCCCAGAAACCACCCCTGGAGCATACCCTAGAGCAACCACTGCTGTCCCCTTaGTCAATGTCACTGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: DPTLQKPQKPPLEHTLEQPLLSP*SMSLDK Trigger: CTTGTCCAGTGACATTGACCAAGGGGACAGCAGTGG...TTGCTCTAGGGTATGCTCCAGGGGTGGTTTCTGGGGCTTCTGCAATGTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCCTGCTGACCAGCTGCTaGGCAGCCACGTCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSLLTSC*AATSSN Trigger: GTTGGAGGACGTGGCTGCTCAGCAGCTGGTCAGCAG...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | TTACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCGGGGACTCAGGACTATaGGGGGCTTTACTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LHSMDILSGALGEYPTLPGDSGL*GALLGE Trigger: CTCTCCCAGTAAAGCCCCTCATAGTCCTGAGTCCCC...GGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GATCCCACATTGCAGAAGCCCCAGAAACCACCCCTGGAGCATACCCTAGAGCAATCCCCTCTGACATCTTaGTCTTTGGGCTCTGCTATC | + |
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Preference number: 4 (lower is better) Translates to: DPTLQKPQKPPLEHTLEQSPLTS*SLGSAI Trigger: GATAGCAGAGCCCAAAGATCAAGATGTCAGAGGGGA...TTGCTCTAGGGTATGCTCCAGGGGTGGTTTCTGGGGCTTCTGCAATGTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | TTACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCGTCTGCTCTTGGTGGTaGGACTGGAGAGTGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LHSMDILSGALGEYPTLPVCSWW*DWRVSP Trigger: AGGGGACACTCTCCAGTCTCACCACCAAGAGCAGAC...GGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | TTACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCTAGCAGCTGGGGTTTaGGCTGGAACTGGATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LHSMDILSGALGEYPTLPLAAGV*AGTGSR Trigger: CCGAGATCCAGTTCCAGCTCAAACCCCAGCTGCTAG...GGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCGACCCTGCTGAGAACTaGCCTGCTGGCTTCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: YILWISCPGLLENIQPCPDPAEN*PAGFSM Trigger: CATTGAGAAGCCAGCAGGGCAGTTCTCAGCAGGGTC...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCGCAAGTTGCCGGCCCTaGAAAGGACAAGGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSASCRP*KGQGLA Trigger: GGCCAGGCCTTGTCCTTTCCAGGGCCGGCAACTTGC...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCAGCCTGACTCCTCTCTaGCCATCTGTTCAGGACTCG | + |
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Preference number: 4 (lower is better) Translates to: YILWISCPGLLENIQPCPSLTPL*PSVQDS Trigger: CGAGTCCTGAACAGATGGCCAGAGAGGAGTCAGGCT...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGATTTTATTGGTGCTGTGTTCCCCTCTGAGCAGCCAGAGTAATCCACCATTCCTGCTGCTGTCCTaGGAACTGGGGGCTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KEILLVLCSPLSSQSNPPFLLLS*ELGAAP Trigger: CGGAGCAGCCCCCAGTTCCCAGGACAGCAGCAGGAA...TGGTGGATTACTCTGGCTGCTCAGAGGGGAACACAGCACCAATAAAATCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | GAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAATTGAGGATCCGAGGCTaGGGGAGTCGGGGCGCGACA | + |
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Preference number: 4 (lower is better) Translates to: EKLLKGSPLGRLRTTALELRIRG*GSRGAT Trigger: TGTCGCGCCCCGACTCCCCCAGCCTCGGATCCTCAA...TTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| 3UTR CAA 72 bp | TTCGCCTACCTTCCCACTCTGCAACTTCTCCCAACCTaGGCTTCCTTCAAGCTCCCTTTAGTATCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FAYLPTLQLLPT*ASFKLPLVSGG Trigger: GCCTCCTGATACTAAAGGGAGCTTGAAGGAAGCCAAGGTTGGGAGAAGTTGCAGAGTGGGAAGGTAGGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAACCCACTCCCGATCGCTaGGCTGGACGCTGTACTGGA | + |
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Preference number: 4 (lower is better) Translates to: EKLLKGSPLGRLRTTALEPTPDR*AGRCTG Trigger: TCCAGTACAGCGTCCAGCTCAGCGATCGGGAGTGGG...TTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCCACACTGAGACCTGCTaGCCAGCTGCTGAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSHTETC*PAAEQP Trigger: TGGCTGCTCAGCAGCTGGTCAGCAGGTCTCAGTGTG...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCCACACTCATCAGCAGTaGCTGAAAACTCGGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YILWISCPGLLENIQPCPHTHQQ*LKTRPT Trigger: AGTGGGCCGAGTTTTCAGCCACTGCTGATGAGTGTG...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GACAGGGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTATGGGGACATCTGGGTaGACTTCCTGGACAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRDQRVERRATSCPCHLGMGTSG*TSWTGL Trigger: CAAACCTGTCCAGGAAGTTCACCCAGATGTCCCCAT...ACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCAAAGCCACGTCGGGTTaGGGCTTGGAGGCACGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSKATSG*GLEARV Trigger: TACACGTGCCTCCAAGCCTCAACCCGACGTGGCTTT...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTTATCCCACGGCTTCCTGCTaGTGTCCTGGGAACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQWFSTCGTEPSSSKNIYPTASC*CPGNWG Trigger: CCCCCAGTTCCCAGGACAGCAGCAGGAAGCCGTGGG...ATAAATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTCGTGCTCCATGCTGTACTTTCTTCTTCTTaGGGGCTTGGACGGGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: EKSNILSLSPGFVFVLHAVLSSS*GLGRDL Trigger: TAGGTCCCGTCCAAGCCCCCAAGAAGAAGAAAGTAC...AGCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | GAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAACCACTTCATCCAGGGCTTaGCTGGCTGCCTCTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETIKGFTIRKAENHCPRTTSSRA*LAASSS Trigger: GGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGT...GGTTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTCTCATCAGCAGTGGCTaGAAACTCGGCCCACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEQWFSTCGTEPSSSKNILISSG*KLGPLP Trigger: CGGGAGTGGGCCGAGTTTTCAGCCACTGCTGATGAG...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACGGGGGCTGCTTCCACTaGTGTCCCCTTGGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFPCNSDILLPSSLLSAHGGCFH*CPLGQC Trigger: ACATTGACCAAGGGGACAGCAGTGGAAGCAGCCCCC...GTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTCCCGATCGCTGAGCTaGACGCTGTACTGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSSRSLS*TLYWKL Trigger: CAACTTCCAGTACAGCGTCCAGCTCAGCGATCGGGA...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAACCTTGGCTTCCTTCAAGCTCCCTTTAGTATCAGGAGGCAATCCTTCCATTTGGTGAGGCCATaGGGACATCTGGGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPNLGFLQAPFSIRRQSFHLVRP*GHLGEL Trigger: AAGTTCACCCAGATGTCCCCATGGCCTCACCAAATG...GAAGGATTGCCTCCTGATACTAAAGGGAGCTTGAAGGAAGCCAAGGTTGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCTGTCCGGGGCTCAATGCTTCCCCCTaGAGGTACAGACACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGNPSIGCYYILWISCPGLNASP*RYRHTC Trigger: ACAGGTGTGTCTGTACCTCCAGGGGGAAGCATTGAG...CCCCGGACAGGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | AATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTTTCAGGTATGGCATCCAGGGCTTGGCTaGCTGCCTCTTCGTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSDILLPSSLLSAHFQVWHPGLG*LPLRPL Trigger: TAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATG...CCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| 3UTR CAA 72 bp | GGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTaGTCACCTGGGTTCGTCTTCGTGCTCCATGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSKSGEKSNILS*SPGFVFVLHAS Trigger: TGAAGCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| 3UTR CAA 72 bp | AGACAGGGATCAAAGAGTGGAGAGAAGAGCAACATCTaGTCCTTGTCACCTGGGTTCGTCTTCGTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQGSKSGEKSNI*SLSPGFVFVLH Trigger: ATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAATTCCCTGGAAAGCTCTaGGGTCTGCATAGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKLLKGSPLGRLRTTALEFPGKL*GLHRSG Trigger: GCCACTCCTATGCAGACCTCAGAGCTTTCCAGGGAA...TTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGACTTGTCTCTGCAAGTTaGCGGCCCTGGAAAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GETIKGFTIRKAENHCPRLVSAS*RPWKGQ Trigger: TTGTCCTTTCCAGGGCCGGCAACTTGCAGAGACAAG...TCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTAGTGCTTGGTCCCCTTaGCACCTACAGCACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFLAILISYYPAPCLVPTSAWSP*HLQHAS Trigger: AGAGGCGTGCTGTAGGTGCCAAGGGGACCAAGCACT...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTGGCCATGGGGACATCTaGGTGAACTTCCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLAILISYYPAPCLVPTGHGDI*VNFLDR Trigger: CCTGTCCAGGAAGTTCACCCAGATGTCCCCATGGCC...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | AATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTTTCAGGTATGGAGCTGGGGTTTGAGCTaGAACTGGATCTCGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSDILLPSSLLSAHFQVWSWGLS*NWISVC Trigger: GCAGACCGAGATCCAGTTCCAGCTCAAACCCCAGCT...CCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| 3UTR CAA 72 bp | ATGCCCTTGGCCTTAGTCAGTGACTGGACCCTTAGGTaGAGTCTAAGTAAATCAGTACCAAGGGCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MPLALVSDWTLR*SLSKSVPRALS Trigger: AGACAGTGCCCTTGGTACTGATTTACTTAGACTCAACCTAAGGGTCCAGTCACTGACTAAGGCCAAGGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| 3UTR CAA 72 bp | TTGCTTAGTGCCCACTTTCAGGTATGGAAAATGCCCTaGGCCTTAGTCAGTGACTGGACCCTTAGGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAHFQVWKMP*ALVSDWTLRLS Trigger: ACTCAACCTAAGGGTCCAGTCACTGACTAAGGCCAAGGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACAGACTCAGCCTCTGCTaGTACAGAGGATACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPCNSDILLPSSLLSAHRLSLC*YRGYRR Trigger: CCTCCTGTATCCTCTGTATCAGCAGAGGCTGAGTCT...GTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCCAAATCCTTCCTCAGTaGAGAAGTGTTCATAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YILWISCPGLLENIQPCPQILPQ*RSVHRP Trigger: AGGTCTATGAACACTTCTTCACTGAGGAAGGATTTG...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | TTACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCCTTGCAAAAGCCTCTaGATCTTGTCTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHSMDILSGALGEYPTLPPCKSL*ILSLQV Trigger: AACTTGCAGAGACAAGATGCAGAGGCTTTTGCAAGG...GGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCCTCAGGGAGAGTCACTaGAAAGCAGTTTCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSLRESH*KAVSRL Trigger: GAGTCTGGAAACTGCTTTGCAGTGACTCTCCCTGAG...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTAGACACTGTCTAAGCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLAILISYYPAPCLVPTRHCLS*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGCTTAGACAGTGTCT...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGATTTTATTGGTGCTGTGTTCCCCTCTGAGCAGCCAGAGTAATCCACCATGTGGCTTATCCTGCTaGGCTTTTGCCATCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEILLVLCSPLSSQSNPPCGLSC*AFAISV Trigger: GACACTGATGGCAAAAGCCCAGCAGGATAAGCCACA...TGGTGGATTACTCTGGCTGCTCAGAGGGGAACACAGCACCAATAAAATCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | CTTGTTGCTTTGACACTTACTGTAGAGCCCTCTTCTGCTGCTCATTTTTATTTATGTTGTCCCCTCCCTTaGGAAACCAGCTGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVALTLTVEPSSAAHFYLCCPLP*ETSCPV Trigger: CACTGGGCAGCTGGTTTCCCAAGGGAGGGGACAACA...TAAATAAAAATGAGCAGCAGAAGAGGGCTCTACAGTAAGTGTCAAAGCAACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | TTAGTATCAGGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCGAGATCCGGAGTGCTTaGTCCCCTTGGCACCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSGGNPSIGCYYILWISEIRSA*SPWHLQ Trigger: CTGTAGGTGCCAAGGGGACCAAGCACTCCGGATCTC...GGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCCTGATACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CCA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTCTCACAGCCCAAGTaGCAAAGGCAACAAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARCPVVFPCNSDILLPSSFSQPK*QRQQTP Trigger: TGGTGTTTGTTGCCTTTGCCACTTGGGCTGTGAGAA...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | GACAGGGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTCTCTGGATGTCTTTCTaGTCTGATCTTGTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DRDQRVERRATSCPCHLGLWMSF*SDLVQL Trigger: TAACTGAACAAGATCAGATCAGAAAGACATCCAGAG...ACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTATTGGGTTGACATTTaGAGGCAAGTGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQRVERRATSCPCHLGSSYWVDI*RQVWTK Trigger: CTTTGTCCACACTTGCCTTCAAATGTCAACCCAATA...AGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR TCA 90 bp | TTAGTATCAGGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCTTCTGGCTTGATCTCTaGGCCTGCTGCAGAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSGGNPSIGCYYILWISFWLDL*ACCREV Trigger: GACCTCTCTGCAGCAGGCTCAGAGATCAAGCCAGAA...GGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCCTGATACTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTGAAGCTATGTCAGACTaGGGCTTGGAGGCAGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEQWFSTCGTEPSSSKNIEAMSD*GLEAGL Trigger: TAAACCTGCCTCCAAGCCGCAGTCTGACATAGCTTC...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR GCA 90 bp | GAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTTATGCAGAGAGGTCCACATaGAATCCAGGTGTGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQWFSTCGTEPSSSKNIYAERST*NPGVQA Trigger: TGCTTGCACACCTGGATTGCATGTGGACCTCTCTGC...ATAAATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | GAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTTATCTTGGTCAATGTCACTaGACAAGGGCTCGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQWFSTCGTEPSSSKNIYLGQCH*TRARHQ Trigger: CTGGTGACGAGCCCTTGTCCAGTGACATTGACCAAG...ATAAATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| 3UTR CAA 72 bp | TTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTaGCTTAGTGCCCACTTTCAGGTATGGAAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPCNSDILLPSS*LSAHFQVWKMP Trigger: GGGCATTTTCCATACCTGAAAGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTGCCCATTTCTTCATATAAGTACATTTCAGGAATTTCATGTAAATTCAGAAAGATCCAAGCCTaGCTCCTCTCTGGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVPISSYKYISGISCKFRKIQA*LLSGHL Trigger: CAGATGGCCAGAGAGGAGTCAGGCTTGGATCTTTCT...GAATTTACATGAAATTCCTGAAATGTACTTATATGAAGAAATGGGCACCCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR GCA 90 bp | GATCAGACAAAAGGCAGGGTGCCCATTTCTTCATATAAGTACATTTCAGGAATTCATGCAATCCAGGTGTaGAAGCAGACGCAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQTKGRVPISSYKYISGIHAIQV*KQTQIQ Trigger: CTGAATTTGCGTCTGCTTGCACACCTGGATTGCATG...AATTCCTGAAATGTACTTATATGAAGAAATGGGCACCCTGCCTTTTGTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTCATCTTCCTCCTCAATaGTGTCACAGAAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FFLAILISYYPAPCLVPTHLPPQ*CHRRRT Trigger: AGTTCTTCTTCTGTGACACCATTGAGGAGGAAGATG...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACGATGTCTTTCTGATCTaGTCTTGTTCAGTTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPCNSDILLPSSLLSAHDVFLI*SCSVIR Trigger: TCTGATAACTGAACAAGATCAGATCAGAAAGACATC...GTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | CTTGTTGCTTTGACACTTACTGTAGAGCCCTCTTCTGCTGCTCATTTTTATTTATTTAGACTCAGTCTTTaGAACAGAACGAGGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVALTLTVEPSSAAHFYLFRLSL*NRTRQI Trigger: GATCTGCCTCGTTCTGTTTCAAAGACTGAGTCTAAA...TAAATAAAAATGAGCAGCAGAAGAGGGCTCTACAGTAAGTGTCAAAGCAACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS-3UTR TCA 90 bp | TTAGTATCAGGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCAGGCACATGTCGTTTTaGCTGAACGTAAATGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSGGNPSIGCYYILWISRHMSF*LNVNEV Trigger: CACTTCATTTACGTTCAGTCAAAACGACATGTGCCT...GGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCCTGATACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS GCA 90 bp | CCAGACTCAGCCTCTGCTGATACAGAGGATACAGGAGGAGGCAGGTaGTTGAGGATCCGAGGCTGGGGGAGTCGGGGCGCGACAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PDSASADTEDTGGGR*LRIRGWGSRGATAT Trigger: TGTGGCTGTCGCGCCCCGACTCCCCCAGCCTCGGATCCTCAAGCACCTGCCTCCTCCTGTATCCTCTGTATCAGCAGAGGCTGAGTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
||
| CDS CCA 90 bp | GCCCTGGAAAGGACAAGGCCTGGCCAGGACAGACACTGTCTAAGCTaGGGAACAGAGGGGCCTCTGACTGTGTGGACGTGCCGGCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: ALERTRPGQDRHCLS*GTEGPLTVWTCRLP Trigger: AGGTAGCCGGCACGTCCACACAGTCAGAGGCCCCTCTGTTCCCCAGCTTAGACAGTGTCTGTCCTGGCCAGGCCTTGTCCTTTCCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 90 bp | AGAGGCCAGGTCAGCCTGCAAGAGGCCACACTCATCAGCAGTGGCTaGAAACTCGGCCCACTCCCGATCGCTGAGCTGGACGCTGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQVSLQEATLISSG*KLGPLPIAELDAVL Trigger: CAGTACAGCGTCCAGCTCAGCGATCGGGAGTGGGCCGAGTTTTCAGCCACTGCTGATGAGTGTGGCCTCTTGCAGGCTGACCTGGCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 90 bp | GATGACTGGCCTCCAGAGCCAGGACAGGCTCACACTGAGACCTGCTaGCCAGCTGCTGAGCAGCCACGTCCTCCAACTCACGGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DDWPPEPGQAHTETC*PAAEQPRPPTHGSV Trigger: AACAGAGCCGTGAGTTGGAGGACGTGGCTGCTCAGCAGCTGGTCAGCAGGTCTCAGTGTGAGCCTGTCCTGGCTCTGGAGGCCAGTCATC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 90 bp | GACAGACACTGTCTAAGCTGGGGAACAGAGGGGCCTCTGACTGTGTaGACGTGCCGGCTACCTGATGACTGGCCTCCAGAGCCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: DRHCLSWGTEGPLTV*TCRLPDDWPPEPGQ Trigger: CTGTCCTGGCTCTGGAGGCCAGTCATCAGGTAGCCGGCACGTCCACACAGTCAGAGGCCCCTCTGTTCCCCAGCTTAGACAGTGTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | TGGACGGGACCTAGGCAGGACTCTCCTGAGGACCCTGCTGAGAACTaGCCTGCTGGCTTCTCAATGCTTCCCCCTGGAGGTACAGACACA | + |
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Preference number: 5 (lower is better) Translates to: WTGPRQDSPEDPAEN*PAGFSMLPPGGTDT Trigger: TGTGTCTGTACCTCCAGGGGGAAGCATTGAGAAGCCAGCAGGGCAGTTCTCAGCAGGGTCCTCAGGAGAGTCCTGCCTAGGTCCCGTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 90 bp | GACATGAGAGCCTCCTTGGGCCTGGTAAGCTGTGGGGAGCTCATCTaGGTAGCAGCAGAGTCCAGAGATCCGGAGTGCTTGGTCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DMRASLGLVSCGELI*VAAESRDPECLVPL Trigger: CAAGGGGACCAAGCACTCCGGATCTCTGGACTCTGCTGCTACCCAGATGAGCTCCCCACAGCTTACCAGGCCCAAGGAGGCTCTCATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 90 bp | CTTGGCACCTACAGCACGCCTCTTCTTACGACCAGGGTTCCGCGGTaGAGCTTCGAGGCTGTCAGGGGAACTCTGAGGGTTGTCGCTATG | + |
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Preference number: 5 (lower is better) Translates to: LGTYSTPLLTTRVPR*SFEAVRGTLRVVAM Trigger: CATAGCGACAACCCTCAGAGTTCCCCTGACAGCCTCGAAGCTTCACCGCGGAACCCTGGTCGTAAGAAGAGGCGTGCTGTAGGTGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 90 bp | AACAGGCTTGGTGGATGCCTCAAGCCCTCCTTCCCTGGAAAGCTCTaGGGTCTGCATAGGAGTGGCCGCAGGCTGTCTGTGCCCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: NRLGGCLKPSFPGKL*GLHRSGRRLSVPKS Trigger: GGATTTGGGCACAGACAGCCTGCGGCCACTCCTATGCAGACCTCAGAGCTTTCCAGGGAAGGAGGGCTTGAGGCATCCACCAAGCCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | TCAATGTCACTGGACAAGGGCTCGTCACCAGAGGCCAGGTCAGCCTaGAAGAGGCCACACTCATCAGCAGTGGCTGAAAACTCGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMSLDKGSSPEARSA*KRPHSSAVAENSAH Trigger: GTGGGCCGAGTTTTCAGCCACTGCTGATGAGTGTGGCCTCTTGCAGGCTGACCTGGCCTCTGGTGACGAGCCCTTGTCCAGTGACATTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 90 bp | TGCATCTTGTCTCTGCAAGTTGCCGGCCCTGGAAAGGACAAGGCCTaGCCAGGACAGACACTGTCTAAGCTGGGGAACAGAGGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: CILSLQVAGPGKDKA*PGQTLSKLGNRGAS Trigger: AGAGGCCCCTCTGTTCCCCAGCTTAGACAGTGTCTGTCCTGGCCAGGCCTTGTCCTTTCCAGGGCCGGCAACTTGCAGAGACAAGATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | ACTCTCCTGAGGACCCTGCTGAGAACTGCCCTGCTGGCTTCTCAATaGTTCCCCCTGGAGGTACAGACACACCTGTATCCACCATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLRTLLRTALLASQ*FPLEVQTHLYPPWQ Trigger: CTGCCATGGTGGATACAGGTGTGTCTGTACCTCCAGGGGGAAGCATTGAGAAGCCAGCAGGGCAGTTCTCAGCAGGGTCCTCAGGAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | TTGGTGGATGCCTCAAGCCCTCCTTCCCTGGAAAGCTCTGAGGTCTaGATAGGAGTGGCCGCAGGCTGTCTGTGCCCAAATCCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LVDASSPPSLESSEV*IGVAAGCLCPNPSS Trigger: TGAGGAAGGATTTGGGCACAGACAGCCTGCGGCCACTCCTATGCAGACCTCAGAGCTTTCCAGGGAAGGAGGGCTTGAGGCATCCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GATCCCACATTGCAGAAGCCCCAGAAACCACCCCTGGAGCATACCCTAGAGCAACTGTTGTCCCCTCCCTaGGGAAACCAGCTGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DPTLQKPQKPPLEHTLEQLLSPP*GNQLPS Trigger: ACTGGGCAGCTGGTTTCCCAAGGGAGGGGACAACAG...TTGCTCTAGGGTATGCTCCAGGGGTGGTTTCTGGGGCTTCTGCAATGTGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GATCCCACATTGCAGAAGCCCCAGAAACCACCCCTGGAGCATACCCTAGAGCAAGACATGAGAGCCTCCTaGGGCCTGGTAAGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPTLQKPQKPPLEHTLEQDMRAS*GLVSCG Trigger: CCCACAGCTTACCAGGCCCAAGGAGGCTCTCATGTC...TTGCTCTAGGGTATGCTCCAGGGGTGGTTTCTGGGGCTTCTGCAATGTGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | TTCAGGACTCGTGGAGTCAGGCTGTGGCTTATCCTGCTGGGCTTTTaGCATCAGTGTCCCAGACATGAGAGCCTCCTTGGGCCTGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRTRGVRLWLILLGF*HQCPRHESLLGPGK Trigger: CTTACCAGGCCCAAGGAGGCTCTCATGTCTGGGACACTGATGGCAAAAGCCCAGCAGGATAAGCCACAGCCTGACTCCACGAGTCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | TGCAATCCAGGTGTGCAAGCAGACGCAAATTCAGCCTTCACCAGTTaGGACCTAGAGGCGGGTGTAGACAAAGCCGTGTCAGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CNPGVQADANSAFTS*DLEAGVDKAVSGSE Trigger: CTCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCTAGGTCGCAACTGGTGAAGGCTGAATTTGCGTCTGCTTGCACACCTGGATTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 90 bp | CTCGCATGTGTCAGGCCATTGGACTTCATCCAGGGCTTGGCTGGCTaGCTCTTCGTCCTCTACGTCTTCATCTTCCTCCTCAATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LACVRPLDFIQGLAG*LFVLYVFIFLLNGV Trigger: GACACCATTGAGGAGGAAGATGAAGACGTAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTCCAATGGCCTGACACATGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | AGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTCGTGCTCCATGCCAAAGCCACGTCGGGTaGAGGCTTGGAGGCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: REEQHLVLVTWVRLRAPCQSHVG*RLGGTC Trigger: ACACGTGCCTCCAAGCCTCAACCCGACGTGGCTTTG...GCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 90 bp | AAAACTCGCATGTGTCAGGCCATTGGACTTCATCCAGGGCTTGGCTaGCTGCCTCTTCGTCCTCTACGTCTTCATCTTCCTCCTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: KTRMCQAIGLHPGLG*LPLRPLRLHLPPQW Trigger: CCATTGAGGAGGAAGATGAAGACGTAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTCCAATGGCCTGACACATGCGAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GACAGGGATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTCAACTCACGGCTCTGTaGTCCCCTCCCTTGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DRDQRVERRATSCPCHLGQLTAL*SPPLGN Trigger: GTTTCCCAAGGGAGGGGACAACAGAGCCGTGAGTTG...ACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTCGTGCTCCATGCTTATCCTGCTGGGCTTTaGCCATCAGTGTCCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EKSNILSLSPGFVFVLHAYPAGL*PSVSQT Trigger: TGTCTGGGACACTGATGGCAAAAGCCCAGCAGGATA...AGCATGGAGCACGAAGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTTTCAGCCTTCACCAGTaGCGACCTAGAGGCGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DQRVERRATSCPCHLGSSFSLHQ*RPRGGC Trigger: ACACCCGCCTCTAGGTCGCAACTGGTGAAGGCTGAA...AGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | CTGCTATCTTGGGTAGAACCCCACCCTGAACTGACTATCACTGTGTCACCTCAGGTCCCCTCTGACATCTaGATCTTTGGGCTCTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLSWVEPHPELTITVSPQVPSDI*IFGLCY Trigger: ATAGCAGAGCCCAAAGATCAAGATGTCAGAGGGGAC...CTGAGGTGACACAGTGATAGTCAGTTCAGGGTGGGGTTCTACCCAAGATAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GGCAGGGTGCCCATTTCTTCATATAAGTACATTTCAGGAATTTCATGTAAATTCGGAGGAGGCAGGTGCTaGAGGATCCGAGGCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: GRVPISSYKYISGISCKFGGGRC*RIRGWG Trigger: CCCCCAGCCTCGGATCCTCAAGCACCTGCCTCCTCC...GAATTTACATGAAATTCCTGAAATGTACTTATATGAAGAAATGGGCACCCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | TTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCTTGCTTAGTGCCCACTGACTTCATCCAGGGCTaGGCTGGCTGCCTCTTCGTC | + |
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Preference number: 5 (lower is better) Translates to: FFLAILISYYPAPCLVPTDFIQG*AGCLFV Trigger: GACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTC...AGTGGGCACTAAGCAAGGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCGCATGTGTCAGGCCATaGGACTTCATCCAGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: ARCPVVFPCNSDILLPSSACVRP*DFIQGL Trigger: CAAGCCCTGGATGAAGTCCAATGGCCTGACACATGC...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GCTAGGTGCCCTGTAGTTTTTCCTTGCAATTCTGATATCCTATTACCCAGCTCCATGTCAGACTGCGGCTaGGAGGCAGGTTTAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: ARCPVVFPCNSDILLPSSMSDCG*EAGLGK Trigger: TTTGCCTAAACCTGCCTCCAAGCCGCAGTCTGACAT...GGAGCTGGGTAATAGGATATCAGAATTGCAAGGAAAAACTACAGGGCACCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GATCAAAGAGTGGAGAGAAGAGCAACATCTTGTCCTTGTCACCTGGGTTCGTCTGAAGAAACTTCTGGCTaGATCTCTGAGCCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DQRVERRATSCPCHLGSSEETSG*ISEPAA Trigger: TGCAGCAGGCTCAGAGATCAAGCCAGAAGTTTCTTC...AGACGAACCCAGGTGACAAGGACAAGATGTTGCTCTTCTCTCCACTCTTTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | CTAGAGCAATGGTTTTCAACCTGTGGCACAGAACCCTCTAGCTCCAAAAATATTCCACGGTGTCTGCTCTaGGTGGTGAGACTGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LEQWFSTCGTEPSSSKNIPRCLL*VVRLES Trigger: ACTCTCCAGTCTCACCACCAAGAGCAGACACCGTGG...AATATTTTTGGAGCTAGAGGGTTCTGTGCCACAGGTTGAAAACCATTGCTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | GAGAAACTATTAAAGGGTTCACCATTAGGAAGGCTGAGAACCACTGCCCTAGAATCCACTGCTGTCCCCTaGGTCAATGTCACTGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: EKLLKGSPLGRLRTTALESTAVP*VNVTGQ Trigger: TTGTCCAGTGACATTGACCAAGGGGACAGCAGTGGA...TTCTAGGGCAGTGGTTCTCAGCCTTCCTAATGGTGAACCCTTTAATAGTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | TTAGTATCAGGAGGCAATCCTTCCATAGGATGCTATTACATTCTATGGATATCCGCTAGGGGCAGGGCCTaGCAAAAGCCTCTGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVSGGNPSIGCYYILWISARGRA*QKPLHL Trigger: AAGATGCAGAGGCTTTTGCAAGGCCCTGCCCCTAGC...GGATATCCATAGAATGTAATAGCATCCTATGGAAGGATTGCCTCCTGATACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS-3UTR CAA 90 bp | TACATTCTATGGATATCCTGTCCGGGGCTCTTGGAGAATATCCAACCCTGCCCCCTTTCTGATCTGATCTaGTTCAGTTATCAGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: YILWISCPGLLENIQPCPLSDLI*FSYQNR Trigger: CCTATTCTGATAACTGAACAAGATCAGATCAGAAAG...GGGGCAGGGTTGGATATTCTCCAAGAGCCCCGGACAGGATATCCATAGAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 90 bp | GCTGACCAGCTGCTGAGCAGCCACGTCCTCCAACTCACGGCTCTGTaGTCCCCTCCCTTGGGAAACCAGCTGCCCAGTGAAGAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ADQLLSSHVLQLTAL*SPPLGNQLPSEEGW Trigger: CCACCCCTCTTCACTGGGCAGCTGGTTTCCCAAGGGAGGGGACAACAGAGCCGTGAGTTGGAGGACGTGGCTGCTCAGCAGCTGGTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | CCTCCAGAGCCAGGACAGGCTCACACTGAGACCTGCTaGCCAGCTGCTGAGCAGCCACGTCCTCCAACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPEPGQAHTETC*PAAEQPRPPTH Trigger: GTGAGTTGGAGGACGTGGCTGCTCAGCAGCTGGTCAGCAGGTCTCAGTGTGAGCCTGTCCTGGCTCTGGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | CCTCTGACTGTGTGGACGTGCCGGCTACCTGATGACTaGCCTCCAGAGCCAGGACAGGCTCACACTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLTVWTCRLPDD*PPEPGQAHTET Trigger: GGTCTCAGTGTGAGCCTGTCCTGGCTCTGGAGGCCAGTCATCAGGTAGCCGGCACGTCCACACAGTCAGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | GTCAGCCTGCAAGAGGCCACACTCATCAGCAGTGGCTaGAAACTCGGCCCACTCCCGATCGCTGAGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSLQEATLISSG*KLGPLPIAELD Trigger: GTCCAGCTCAGCGATCGGGAGTGGGCCGAGTTTTCAGCCACTGCTGATGAGTGTGGCCTCTTGCAGGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | GGTGGATGCCTCAAGCCCTCCTTCCCTGGAAAGCTCTaGGGTCTGCATAGGAGTGGCCGCAGGCTGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGCLKPSFPGKL*GLHRSGRRLSV Trigger: CACAGACAGCCTGCGGCCACTCCTATGCAGACCTCAGAGCTTTCCAGGGAAGGAGGGCTTGAGGCATCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | CCTAGGCAGGACTCTCCTGAGGACCCTGCTGAGAACTaGCCTGCTGGCTTCTCAATGCTTCCCCCTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRQDSPEDPAEN*PAGFSMLPPGG Trigger: ACCTCCAGGGGGAAGCATTGAGAAGCCAGCAGGGCAGTTCTCAGCAGGGTCCTCAGGAGAGTCCTGCCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | TGTCTAAGCTGGGGAACAGAGGGGCCTCTGACTGTGTaGACGTGCCGGCTACCTGATGACTGGCCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CLSWGTEGPLTV*TCRLPDDWPPE Trigger: CTCTGGAGGCCAGTCATCAGGTAGCCGGCACGTCCACACAGTCAGAGGCCCCTCTGTTCCCCAGCTTAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | GCCTCCTTGGGCCTGGTAAGCTGTGGGGAGCTCATCTaGGTAGCAGCAGAGTCCAGAGATCCGGAGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLGLVSCGELI*VAAESRDPECL Trigger: CAAGCACTCCGGATCTCTGGACTCTGCTGCTACCCAGATGAGCTCCCCACAGCTTACCAGGCCCAAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 72 bp | CTGCTGAGCAGCCACGTCCTCCAACTCACGGCTCTGTaGTCCCCTCCCTTGGGAAACCAGCTGCCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSSHVLQLTAL*SPPLGNQLPSE Trigger: TTCACTGGGCAGCTGGTTTCCCAAGGGAGGGGACAACAGAGCCGTGAGTTGGAGGACGTGGCTGCTCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | AGCAGCTGGGGTTTGAGCTGGAACTGGATCTCGGTCTaGCACTATGGCCTCTCCCAACCTGACGGCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSWGLSWNWISV*HYGLSQPDGGS Trigger: ACTTCCGCCGTCAGGTTGGGAGAGGCCATAGTGGCAGACCGAGATCCAGTTCCAGCTCAAACCCCAGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | CAGCAGAGTCCAGAGATCCGGAGTGCTTGGTCCCCTTaGCACCTACAGCACGCCTCTTCTTACGACCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QQSPEIRSAWSP*HLQHASSYDQG Trigger: ACCCTGGTCGTAAGAAGAGGCGTGCTGTAGGTGCCAAGGGGACCAAGCACTCCGGATCTCTGGACTCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | CCCAGACATGAGAGCCTCCTTGGGCCTGGTAAGCTGTaGGGAGCTCATCTGGGTAGCAGCAGAGTCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRHESLLGPGKL*GAHLGSSRVQR Trigger: TCTCTGGACTCTGCTGCTACCCAGATGAGCTCCCCACAGCTTACCAGGCCCAAGGAGGCTCTCATGTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 90 bp | TTACTGGGAGAGCTAGGGGCAGGGCCTTGCAAAAGCCTCTGCATCTaGTCTCTGCAAGTTGCCGGCCCTGGAAAGGACAAGGCCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLGELGAGPCKSLCI*SLQVAGPGKDKAWP Trigger: TGGCCAGGCCTTGTCCTTTCCAGGGCCGGCAACTTGCAGAGACAAGATGCAGAGGCTTTTGCAAGGCCCTGCCCCTAGCTCTCCCAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | TACAGCACGCCTCTTCTTACGACCAGGGTTCCGCGGTaGAGCTTCGAGGCTGTCAGGGGAACTCTGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: YSTPLLTTRVPR*SFEAVRGTLRV Trigger: AACCCTCAGAGTTCCCCTGACAGCCTCGAAGCTTCACCGCGGAACCCTGGTCGTAAGAAGAGGCGTGCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | CGTGGAGTCAGGCTGTGGCTTATCCTGCTGGGCTTTTaGCATCAGTGTCCCAGACATGAGAGCCTCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGVRLWLILLGF*HQCPRHESLLG Trigger: CCCAAGGAGGCTCTCATGTCTGGGACACTGATGGCAAAAGCCCAGCAGGATAAGCCACAGCCTGACTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | TCTCTGCAAGTTGCCGGCCCTGGAAAGGACAAGGCCTaGCCAGGACAGACACTGTCTAAGCTGGGGAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLQVAGPGKDKA*PGQTLSKLGNR Trigger: TCTGTTCCCCAGCTTAGACAGTGTCTGTCCTGGCCAGGCCTTGTCCTTTCCAGGGCCGGCAACTTGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 72 bp | GAGCTAGGGGCAGGGCCTTGCAAAAGCCTCTGCATCTaGTCTCTGCAAGTTGCCGGCCCTGGAAAGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: ELGAGPCKSLCI*SLQVAGPGKDK Trigger: CTTGTCCTTTCCAGGGCCGGCAACTTGCAGAGACAAGATGCAGAGGCTTTTGCAAGGCCCTGCCCCTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | GGCGTGAAGGGATGTGTAGACGAAGCTATGTCAGACTaGGGCTTGGAGGCAGGTTTAGGCAAAGCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: GVKGCVDEAMSD*GLEAGLGKATS Trigger: CGACGTGGCTTTGCCTAAACCTGCCTCCAAGCCGCAGTCTGACATAGCTTCGTCTACACATCCCTTCACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | GTCAGGCCATTGGACTTCATCCAGGGCTTGGCTGGCTaGCTCTTCGTCCTCTACGTCTTCATCTTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VRPLDFIQGLAG*LFVLYVFIFLL Trigger: GAGGAGGAAGATGAAGACGTAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTCCAATGGCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 72 bp | GCTTTTGCCATCAGTGTCCCAGACATGAGAGCCTCCTaGGGCCTGGTAAGCTGTGGGGAGCTCATCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: AFAISVPDMRAS*GLVSCGELIWV Trigger: TACCCAGATGAGCTCCCCACAGCTTACCAGGCCCAAGGAGGCTCTCATGTCTGGGACACTGATGGCAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 72 bp | CTCGCATGTGTCAGGCCATTGGACTTCATCCAGGGCTaGGCTGGCTGCCTCTTCGTCCTCTACGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LACVRPLDFIQG*AGCLFVLYVFI Trigger: GATGAAGACGTAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTCCAATGGCCTGACACATGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | GGTGTGCAAGCAGACGCAAATTCAGCCTTCACCAGTTaGGACCTAGAGGCGGGTGTAGACAAAGCCGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GVQADANSAFTS*DLEAGVDKAVS Trigger: TGACACGGCTTTGTCTACACCCGCCTCTAGGTCGCAACTGGTGAAGGCTGAATTTGCGTCTGCTTGCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 72 bp | AGGTGTGCAAGCAGACGCAAATTCAGCCTTCACCAGTaGCGACCTAGAGGCGGGTGTAGACAAAGCCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RCASRRKFSLHQ*RPRGGCRQSRV Trigger: GACACGGCTTTGTCTACACCCGCCTCTAGGTCGCAACTGGTGAAGGCTGAATTTGCGTCTGCTTGCACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 90 bp | ATGCAATCCAGGTGTGCAAGCAGACGCAAATTCAGCCTTCACCAGTaGCGACCTAGAGGCGGGTGTAGACAAAGCCGTGTCAGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: MQSRCASRRKFSLHQ*RPRGGCRQSRVRLR Trigger: TCTGAGCCTGACACGGCTTTGTCTACACCCGCCTCTAGGTCGCAACTGGTGAAGGCTGAATTTGCGTCTGCTTGCACACCTGGATTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CAA 90 bp | CGAAGCACATCCACTGCGGCAGGCATAGAGGAAGAAACTTCTGGCTaGATCTCTGAGCCTGCTGCAGAGAGGTCCACATGCAATCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RSTSTAAGIEEETSG*ISEPAAERSTCNPG Trigger: ACCTGGATTGCATGTGGACCTCTCTGCAGCAGGCTCAGAGATCAAGCCAGAAGTTTCTTCCTCTATGCCTGCCGCAGTGGATGTGCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | GGCAGGCATAGAGGAAGAAACTTCTGGCTTGATCTCTaGGCCTGCTGCAGAGAGGTCCACATGCAATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRHRGRNFWLDL*ACCREVHMQSR Trigger: CCTGGATTGCATGTGGACCTCTCTGCAGCAGGCTCAGAGATCAAGCCAGAAGTTTCTTCCTCTATGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS GCA 72 bp | TGTTCAGGACTCGTGGAGTCAGGCTGTGGCTTATCCTaGTGGGCTTTTGCCATCAGTGTCCCAGACATGAGA | + |
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Preference number: 6 (lower is better) Translates to: CSGLVESGCGLS*WAFAISVPDMR Trigger: TCTCATGTCTGGGACACTGATGGCAAAAGCCCAGCAGGATAAGCCACAGCCTGACTCCACGAGTCCTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | ATGTGTCAGGCCATTGGACTTCATCCAGGGCTTGGCTaGCTGCCTCTTCGTCCTCTACGTCTTCATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: MCQAIGLHPGLG*LPLRPLRLHLP Trigger: AGGAAGATGAAGACGTAGAGGACGAAGAGGCAGCCAGCCAAGCCCTGGATGAAGTCCAATGGCCTGACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS CCA 72 bp | CTGGGGCTTGTAGATCTGAGGTTCTCACAGCCCAAGTaGCAAAGGCAACAAACACCAGGCACATGTCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LGLVDLRFSQPK*QRQQTPGTCRF Trigger: AAAACGACATGTGCCTGGTGTTTGTTGCCTTTGCCACTTGGGCTGTGAGAACCTCAGATCTACAAGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | GTGGCAAAGGCAACAAACACCAGGCACATGTCGTTTTaGCTGAACGTAAATGAAGTGAGGGGGCTCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: VAKATNTRHMSF*LNVNEVRGLRS Trigger: ACTACGGAGCCCCCTCACTTCATTTACGTTCAGTCAAAACGACATGTGCCTGGTGTTTGTTGCCTTTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | AACAGGTATAGACACACTCTCTTTAGACTCAGTCTTTaGAACAGAACGAGGCAGATCTGTACGAAGCACATC | + |
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Preference number: 6 (lower is better) Translates to: NRYRHTLFRLSL*NRTRQICTKHI Trigger: GATGTGCTTCGTACAGATCTGCCTCGTTCTGTTTCAAAGACTGAGTCTAAAGAGAGTGTGTCTATACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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| CDS TCA 72 bp | ACCACATGTAACGCAGCTCTGGATGTCTTTCTGATCTaGTCTTGTTCAGTTATCAGAATAGGTGTAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: TTCNAALDVFLI*SCSVIRIGVER Trigger: TCTTTCTACACCTATTCTGATAACTGAACAAGATCAGATCAGAAAGACATCCAGAGCTGCGTTACATGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105572.3 |
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