RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PER2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055866

Ensembl transcript IDs: ENSMUST00000069620.10

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTaGGGACCAGCAGCACAGATAGATGTGACAGAGACCCGAAGCCAC +
Preference number: 1 (lower is better)
Translates to: ELGREVPFSPQVPVI*GPAAQIDVTETRSH
Trigger: GTGGCTTCGGGTCTCTGTCACATCTATCTGTGCTGCTGGTCCTCAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 90 bp CAAACTGGAGAACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTaGTCAGTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTC +
Preference number: 1 (lower is better)
Translates to: QTGELRAAVWVPSPP*SVAAFCWELMSERV
Trigger: GACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGTTCTCCAGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 90 bp TGTGGGGGTGCTAGTCTGATGGTGGGCATCGTTTGCAGAAGCCACTaGGCTCCACTAGTCCAGAGCAGGCATTTCAACTTTGTTGACGAA +
Preference number: 1 (lower is better)
Translates to: CGGASLMVGIVCRSH*APLVQSRHFNFVDE
Trigger: TTCGTCAACAAAGTTGAAATGCCTGCTCTGGACTAGTGGAGCTCAGTGGCTTCTGCAAACGATGCCCACCATCAGACTAGCACCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 90 bp ATTTCAACTTTGTTGACGAACAGAAGCCATGTCAGACTGGAATGTTaGCCACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGC +
Preference number: 1 (lower is better)
Translates to: ISTLLTNRSHVRLEC*PPQAGPEAKAATPC
Trigger: GCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTGGTCAACATTCCAGTCTGACATGGCTTCTGTTCGTCAACAAAGTTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 90 bp CACACAAATATATTGCACTGGGTGAAGGTACGTTTGGTTTGCGCATaGACAAACCTCTTGTCCGGCAAGGCTCACGAATCATCATCGCAC +
Preference number: 1 (lower is better)
Translates to: HTNILHWVKVRLVCA*TNLLSGKAHESSSH
Trigger: GTGCGATGATGATTCGTGAGCCTTGCCGGACAAGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATATATTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 90 bp AGTCATAAAAAGACACAAGCAGTCACACAAATATATTGCACTGGGTaGAGGTACGTTTGGTTTGCGCATGAACAAACCTCTTGTCCGGCA +
Preference number: 1 (lower is better)
Translates to: SHKKTQAVTQIYCTG*RYVWFAHEQTSCPA
Trigger: TGCCGGACAAGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATATATTTGTGTGACTGCTTGTGTCTTTTTATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR GCA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGTGCCACAGCTCTCTCTaGACACTGGCCACAATGGTC +
Preference number: 2 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRCHSSL*TLATMV
Trigger: GACCATTGTGGCCAGTGTGCAGAGAGAGCTGTGGCA...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACAAAGCTGGGCCCTTGGTaGATAGCCTCTTGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: PGLQRPPCRHGNMADDATKLGPW*IASCGF
Trigger: GAAGCCACAAGAGGCTATCCACCAAGGGCCCAGCTT...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACAGCTCTCTCTGCACACTaGCCACAATGGTCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: PGLQRPPCRHGNMADDATALSAH*PQWSKK
Trigger: CTTTTTAGACCATTGTGGCCAGTGTGCAGAGAGAGC...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGGAGCTCCCTGCAAACTaGAGAACTCAGGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPELPAN*RTQGSS
Trigger: ACTGCTGCCCTGAGTTCTCCAGTTTGCAGGGAGCTC...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 90 bp GGGAGATACAATCACACTGTGAGAAAGTTCCAGAAAGCTGGGCCCTaGGTGGATAGCCTCTTGTGGCTTCCCTGTTACCTGCCACATCCT +
Preference number: 2 (lower is better)
Translates to: GRYNHTVRKFQKAGP*VDSLLWLPCYLPHP
Trigger: AGGATGTGGCAGGTAACAGGGAAGCCACAAGAGGCTATCCACCAAGGGCCCAGCTTTCTGGAACTTTCTCACAGTGTGATTGTATCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAGGACATTGGCACACTaGAAAGAGGTTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVRTLAH*KEVSWR
Trigger: CCTCCATGAAACCTCTTTCCAGTGTGCCAATGTCCT...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR GCA 90 bp TTAGACCATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCCAACAAAGCCTGGCTTaGAGAGGCCACCATGCAGAC +
Preference number: 2 (lower is better)
Translates to: LDHLLSTLRIRLVREAAVQQSLA*RGHHAD
Trigger: GTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTG...GACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATGGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp TTAGACCATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCAGAAAGCTGGGCCCTTaGTGGATAGCCTCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: LDHLLSTLRIRLVREAAVRKLGP*WIASCG
Trigger: GCCACAAGAGGCTATCCACCAAGGGCCCAGCTTTCT...GACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATGGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR TCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTTATAGAGTGGGAGGCTaGGCTCCCTGCAAACTGGAG +
Preference number: 2 (lower is better)
Translates to: SCPARLTNHHRTNSESLFYRVGG*APCKLE
Trigger: CTCCAGTTTGCAGGGAGCTCAGCCTCCCACTCTATA...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR TCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACACCACAGGCAGGACCTaGAGCCAAAGCTGCTACACC +
Preference number: 2 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYTTGRT*SQSCYT
Trigger: GGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGT...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR TCA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGAGGTATGGGTCCATGTaGTTAGAAACCACAAGATCT +
Preference number: 2 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPRYGSM*LETTRS
Trigger: AGATCTTGTGGTTTCTAATCACATGGACCCATACCT...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 90 bp AAGCAGTCACACAAATATATTGCACTGGGTGAAGGTACGTTTGGTTaGCGCATGAACAAACCTCTTGTCCGGCAAGGCTCACGAATCATC +
Preference number: 2 (lower is better)
Translates to: KQSHKYIALGEGTFG*RMNKPLVRQGSRII
Trigger: GATGATTCGTGAGCCTTGCCGGACAAGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATATATTTGTGTGACTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR TCA 90 bp TTAGACCATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCGATACAATCACACTGTaGGAAAGTTCCAGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: LDHLLSTLRIRLVREAAVDTITL*ESSRKL
Trigger: CAGCTTTCTGGAACTTTCTCACAGTGTGATTGTATC...GACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATGGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR TCA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAACGTAAGGGAACACACTaGGAGGATGTCAGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKRKGTH*EDVRRD
Trigger: ATCTCTCCTGACATCCTCTCAGTGTGTTCCCTTACG...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 90 bp GACACCCGTGTAAGCACACATTCTAAAGAAAACAGGGCTGGATGCTaGGCATCTTGTAAACAGATTCACAAAATTATCCTAGGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: DTRVSTHSKENRAGC*ASCKQIHKIILGSQ
Trigger: TTGACTTCCTAGGATAATTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAATGTGTGCTTACACGGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CCA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAAGATGGTCTCTCTGCTTaGGAGATACAATCACACTGT +
Preference number: 2 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKDGLSA*EIQSHC
Trigger: ACAGTGTGATTGTATCTCCCAAGCAGAGAGACCATC...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 90 bp AAAATAACGCTGATGGTAAACATTCAAGAGAGAAGAGAGAAGGTTTaGGCAGTTTTGTGTTTAAGTAACAAGCGTAGGCTTAGACCATCT +
Preference number: 2 (lower is better)
Translates to: KITLMVNIQERREKV*AVLCLSNKRRLRPS
Trigger: AGATGGTCTAAGCCTACGCTTGTTACTTAAACACAAAACTGCCAAAACCTTCTCTCTTCTCTCTTGAATGTTTACCATCAGCGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 72 bp CCCTGCAAACTGGAGAACTCAGGGCAGCAGTGTGGGTaGCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PCKLENSGQQCG*PLLRAQWLLSA
Trigger: AGCAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGTTCTCCAGTTTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 72 bp GAACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTaGTCAGTGGCTGCTTTCTGCTGGGAGCTAATGTCT +
Preference number: 3 (lower is better)
Translates to: ELRAAVWVPSPP*SVAAFCWELMS
Trigger: AGACATTAGCTCCCAGCAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CCA 72 bp CTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATaGCTGATGATGCCACAGCTCTCTCTGCACACTGGC +
Preference number: 3 (lower is better)
Translates to: LACRGHHADTAT*LMMPQLSLHTG
Trigger: GCCAGTGTGCAGAGAGAGCTGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 72 bp TGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTaGTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAG +
Preference number: 3 (lower is better)
Translates to: WVPSPPCSVAAF*WELMSERVQPK
Trigger: CTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CCA 72 bp ATACATATAGAGTGGGAGGCTGAGCTCCCTGCAAACTaGAGAACTCAGGGCAGCAGTGTGGGTGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: IHIEWEAELPAN*RTQGSSVGALS
Trigger: GGAGAGGGCACCCACACTGCTGCCCTGAGTTCTCCAGTTTGCAGGGAGCTCAGCCTCCCACTCTATATGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 72 bp TCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATaGAGACACGGCAACATGGCTGATGATGCCACAGCT +
Preference number: 3 (lower is better)
Translates to: STATKPGLQRPP*RHGNMADDATA
Trigger: AGCTGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp TGTCAGACTGGAATGTTGACCACCACAGGCAGGACCTaGAGCCAAAGCTGCTACACCATGCTCCAAACCACG +
Preference number: 3 (lower is better)
Translates to: CQTGMLTTTGRT*SQSCYTMLQTT
Trigger: CGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTGGTCAACATTCCAGTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp AGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTaGGGACCAGCAGCACAGATAGATGTGACAGAGACC +
Preference number: 3 (lower is better)
Translates to: REVPFSPQVPVI*GPAAQIDVTET
Trigger: GGTCTCTGTCACATCTATCTGTGCTGCTGGTCCTCAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp GCTACACCATGCTCCAAACCACGTAAGGGAACACACTaGGAGGATGTCAGGAGAGATGGTCTCTCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: ATPCSKPRKGTH*EDVRRDGLSAW
Trigger: CCAAGCAGAGAGACCATCTCTCCTGACATCCTCTCAGTGTGTTCCCTTACGTGGTTTGGAGCATGGTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp TTGTTGACGAACAGAAGCCATGTCAGACTGGAATGTTaGCCACCACAGGCAGGACCTGAAGCCAAAGCTGCT +
Preference number: 3 (lower is better)
Translates to: LLTNRSHVRLEC*PPQAGPEAKAA
Trigger: AGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTGGTCAACATTCCAGTCTGACATGGCTTCTGTTCGTCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp GCTAGTCTGATGGTGGGCATCGTTTGCAGAAGCCACTaGGCTCCACTAGTCCAGAGCAGGCATTTCAACTTT +
Preference number: 3 (lower is better)
Translates to: ASLMVGIVCRSH*APLVQSRHFNF
Trigger: AAAGTTGAAATGCCTGCTCTGGACTAGTGGAGCTCAGTGGCTTCTGCAAACGATGCCCACCATCAGACTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR GCA 72 bp CCTTGGTGGATAGCCTCTTGTGGCTTCCCTGTTACCTaGCACATCCTGGTGTTATGTTTCAGAACAATCCAC +
Preference number: 3 (lower is better)
Translates to: PWWIASCGFPVT*HILVLCFRTIH
Trigger: GTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGAAGCCACAAGAGGCTATCCACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp AGATGGTCTCTCTGCTTGGGAGATACAATCACACTGTaGGAAAGTTCCAGAAAGCTGGGCCCTTGGTGGATA +
Preference number: 3 (lower is better)
Translates to: RWSLCLGDTITL*ESSRKLGPWWI
Trigger: TATCCACCAAGGGCCCAGCTTTCTGGAACTTTCTCACAGTGTGATTGTATCTCCCAAGCAGAGAGACCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp ATATTGCACTGGGTGAAGGTACGTTTGGTTTGCGCATaGACAAACCTCTTGTCCGGCAAGGCTCACGAATCA +
Preference number: 3 (lower is better)
Translates to: ILHWVKVRLVCA*TNLLSGKAHES
Trigger: TGATTCGTGAGCCTTGCCGGACAAGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp AGCTCCACTAGTCCAGAGCAGGCATTTCAACTTTGTTaGCGAACAGAAGCCATGTCAGACTGGAATGTTGAC +
Preference number: 3 (lower is better)
Translates to: SSTSPEQAFQLC*RTEAMSDWNVD
Trigger: GTCAACATTCCAGTCTGACATGGCTTCTGTTCGTCAACAAAGTTGAAATGCCTGCTCTGGACTAGTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR-3UTR CAA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAATTGGTGGATAGCCTCTaGTGGCTTCCCTGTTACCTG +
Preference number: 3 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKLVDSL*WLPCYL
Trigger: CAGGTAACAGGGAAGCCACAAGAGGCTATCCACCAA...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR TCA 72 bp AAGACACAAGCAGTCACACAAATATATTGCACTGGGTaGAGGTACGTTTGGTTTGCGCATGAACAAACCTCT +
Preference number: 3 (lower is better)
Translates to: KTQAVTQIYCTG*RYVWFAHEQTS
Trigger: AGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATATATTTGTGTGACTGCTTGTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp ACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGTGCCGGCTGGAGGGGTaGCTGGGCAAGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: TQGSSVGALSSVLSGCFLCRLEG*LGKRTA
Trigger: AGCCGTGCGCTTGCCCAGTCACCCCTCCAGCCGGCA...CAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGAGTGCAGCCCGGGGCTaGCTGTGGCCTTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRSAARG*LWPSGM
Trigger: CATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCACT...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp ACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGGCTTCTAGACAGGGCTaGGCCAGTGGCCGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TQGSSVGALSSVLSGCFLASRQG*ASGRAE
Trigger: CTCTGCTCGGCCACTGGCTCAGCCCTGTCTAGAAGC...CAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGGCCTGCTCACCTCCCTaGACCTCTGCAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRACSPP*TSAGSP
Trigger: AGGGCTTCCTGCAGAGGTTCAGGGAGGTGAGCAGGC...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTACTTGGAGGGCCGCGCTaGCTCTCCAGAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVLGGPR*LSRVQP
Trigger: GGGCTGCACTCTGGAGAGGCAGCGCGGCCCTCCAAG...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGCCTTGGTGGGACTGGTaGGACTTGGGGAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TQGSSVGALSSVLSGCFLPWWDW*DLGRSP
Trigger: TGGACTTCTCCCCAAGTCCCACCAGTCCCACCAAGG...CAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp TTTTGTAGAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTGACAGCCTGGGTGGGCTaGGGTGCCCCTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FCRAGQRGPLLSTGSSDLTAWVG*GAPGSL
Trigger: CAAGGAGCCAGGGGCACCTCAGCCCACCCAGGCTGT...CAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTCTACAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp ACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGCTTGGCCTTCTTGTCTaGAGGGAGGTGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TQGSSVGALSSVLSGCFLLGLLV*REVDLQ
Trigger: CTGAAGGTCCACCTCCCTGCAGACAAGAAGGCCAAG...CAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACACCTTTTCAGGGTGGCTaGCTCGCTGCAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGLQRPPCRHGNMADDATPFQGG*LAAALQ
Trigger: CTGGAGAGCTGCAGCGAGGCAGCCACCCTGAAAAGG...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TTTTGTAGAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTGGGACTGGAAGAGCGGTaGGGAGGCTCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FCRAGQRGPLLSTGSSDLGLEER*GGSAQG
Trigger: GCCCTGGGCAGAGCCTCCCCACCGCTCTTCCAGTCC...CAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTCTACAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGCTACTGCCTCTGGACTaGAAGAGCGGTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQLLPLD*KSGGEA
Trigger: AGCCTCCCCACCGCTCTTCCAGTCCAGAGGCAGTAG...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAGCAGGCAGCAGAGCTaGCTCTCAGCACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVSRQQS*LSAPCC
Trigger: GCAGCAGGGTGCTGAGAGCCAGCTCTGCTGCCTGCT...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCTGAGGACCATGAGGCAGCCTCCATGACAACACAGACCACCTCAGTCTCAAGTATGGTGAAGCCAGTGTaGGTGGCTGCAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PEDHEAASMTTQTTSVSSMVKPV*VAAGGA
Trigger: GGCGCCACCTGCAGCCACCCACACTGGCTTCACCAT...ACTTGAGACTGAGGTGGTCTGTGTTGTCATGGAGGCTGCCTCATGGTCCTCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAGGGCCTGAGGCAGGTTTaGGGTTGCTGGTGGGAACGG +
Preference number: 4 (lower is better)
Translates to: PQAGPEAKAATPCSKPRKGLRQV*GCWWER
Trigger: CCGTTCCCACCAGCAACCCCAAACCTGCCTCAGGCC...CTTACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTACTGCCTGCCCCACTTTaGGATGTGCCGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVLPAPL*DVPKPS
Trigger: GCTGGGCTTCGGCACATCCCAAAGTGGGGCAGGCAG...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAGTCAGGGAGCTCAGGTaGGCACTGACCTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVVRELR*ALTSVW
Trigger: CCACACAGAGGTCAGTGCTCACCTGAGCTCCCTGAC...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp CCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAGGGATGTGTCGGAGGGTaGCCAGGCTGTGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: PQAGPEAKAATPCSKPRKGCVGG*PGCGIQ
Trigger: CTGAATGCCACAGCCTGGTCACCCTCCGACACATCC...CTTACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGTTCCGCTGGAGCCACTaGTCATGTCCACGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRFRWSH*SCPRLP
Trigger: AGGAAGACGTGGACATGAGCAGTGGCTCCAGCGGAA...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGAGGACATTGGCCCCCTGGCTCCTTGGTaGGACTGGTGGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: PHPGVMFQNNPQGPEDIGPLAPW*DWWDLG
Trigger: CCCCAAGTCCCACCAGTCCCACCAAGGAGCCAGGGG...GCCAATGTCCTCTGGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGTCAAGGGCCGGTCGCTaGGGTGGAGCTGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPSRAGR*GGAARA
Trigger: TGCTCGTGCAGCTCCACCCCAGCGACCGGCCCTTGA...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGAGGCCCCTTTTCTTaGCTGAGGCCGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLLPATSWCYVSEQSTGARGPFS*LRPPAA
Trigger: TGCGGCCGGCGGCCTCAGCCAAGAAAAGGGGCCTCT...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGGGGGACTACTGCCTCTaGACTGGAAGAGCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWGDYCL*TGRAVG
Trigger: CCCCACCGCTCTTCCAGTCCAGAGGCAGTAGTCCCC...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGCCATCAGCAGCCAGATaGGGTCCTGCAAGACGTACT +
Preference number: 4 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQPSAAR*GPARRT
Trigger: AGTACGTCTTGCAGGACCCCATCTGGCTGCTGATGG...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAGTCCTCCAGACCCTGTaGTCTCAGAAGAGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVVLQTL*SQKSPE
Trigger: CTCGGGACTCTTCTGAGAGCACAGGGTCTGGAGGAC...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACAGAGATGTGCCAGATGTaGAGTCCAGACCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGLQRPPCRHGNMADDATEMCQM*SPDQKL
Trigger: CAGCTTCTGGTCTGGACTGCACATCTGGCACATCTC...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCTGAGGACCATGAGGCAGCCTCCATGACAACACAGACCACCTCAGTCTCAAGTGGGACTGGTGGGACTTaGGGAGAAGTCCACGTATCC +
Preference number: 4 (lower is better)
Translates to: PEDHEAASMTTQTTSVSSGTGGT*GEVHVS
Trigger: GGATACGTGGACTTCTCCCCAAGTCCCACCAGTCCC...ACTTGAGACTGAGGTGGTCTGTGTTGTCATGGAGGCTGCCTCATGGTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTGGCTCCCATAGCCACTaGAGCCGCTGTGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRGSHSH*SRCGGQ
Trigger: CTGTCCCCCACAGCGGCTCCAGTGGCTATGGGAGCC...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TTTTGTAGAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTGCGCCACCACCGTCCCTaGTGTGGATACTATTCCGGG +
Preference number: 4 (lower is better)
Translates to: FCRAGQRGPLLSTGSSDLRHHRP*CGYYSG
Trigger: CCCGGAATAGTATCCACACCAGGGACGGTGGTGGCG...CAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTCTACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCTGGGTGGGCTGAGGTaGCCCTGGCTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGLGGLR*PWLLGG
Trigger: CCCACCAAGGAGCCAGGGGCACCTCAGCCCACCCAG...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGCATGCACGATGGTGCTaGTGTAGCTGCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWHARWC*CSCTGW
Trigger: CCAGCCAGTGCAGCTACAGCAGCACCATCGTGCATG...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTGGTCCCCAGGGTCCCTaGGGCTCCAGTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGGPQGP*GSSAAF
Trigger: GAAGGCAGCACTGGAGCCGCAGGGACCCTGGGGACC...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACAATGGCAGGCAAATGTTaGCTTTCTCCTCACTCTCGC +
Preference number: 4 (lower is better)
Translates to: PGLQRPPCRHGNMADDATMAGKC*LSPHSR
Trigger: GCGAGAGTGAGGAGAAAGGCAACATTTGCCTGCCAT...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAAAAGCTGCTGTCCCTGTaGTCCCCAGGGTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKKLLSL*SPGSLR
Trigger: CCGCAGGGACCCTGGGGACCACAGGGACAGCAGCTT...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTGCACAACAGGCATGGTaGAGCCAGTGTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRAQQAW*SQCGWL
Trigger: CAGCCACCCACACTGGCTTCACCATGCCTGTTGTGC...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGAGGACATTGGCAAGGCACATCCACACTaGAGGGCTGGCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PHPGVMFQNNPQGPEDIGKAHPH*RAGSHW
Trigger: CCAGTGAGAGCCAGCCCTGCAGTGTGGATGTGCCTT...GCCAATGTCCTCTGGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAAGAATCTAAGCCGCTaGACACACTCCAGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVKNLSR*THSRAE
Trigger: TTCCGCCCTGGAGTGTGTGCAGCGGCTTAGATTCTT...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGAGGACATTGGCCTCTCAGCACCCTGCTaGTCTTGCACCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PHPGVMFQNNPQGPEDIGLSAPC*SCTLTR
Trigger: CCTGGTCAAGGTGCAAGAGCAGCAGGGTGCTGAGAG...GCCAATGTCCTCTGGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCGGAGTCTTCTCCTCTaGGCACGGGGAGGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: TFKSNDSSLVMSRSTRGHRSLLL*ARGGCE
Trigger: TTCGCAGCCTCCCCGTGCCCAGAGGAGAAGACTCCG...GTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTACAGGGCTGAGCCAGTaGCCGAGCAGAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGTGLSQ*PSRGPR
Trigger: GCGAGGACCTCTGCTCGGCCACTGGCTCAGCCCTGT...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGCACCTTCCTCCTCTTTaGCTTCTGAGGTATCACAGA +
Preference number: 4 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRHLPPL*LLRYHR
Trigger: TCTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTG...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 72 bp AAGTTCCAGAAAGCTGGGCCCTTGGTGGATAGCCTCTaGTGGCTTCCCTGTTACCTGCCACATCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KFQKAGPLVDSL*WLPCYLPHPGV
Trigger: AACACCAGGATGTGGCAGGTAACAGGGAAGCCACAAGAGGCTATCCACCAAGGGCCCAGCTTTCTGGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTATCCTCCATGCACTCCTaGGTGAAAGAATCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVSSMHS*VKESKP
Trigger: CGGCTTAGATTCTTTCACTCAGGAGTGCATGGAGGA...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGATGATGTCTGGCTCATaGGGTGTTCGTGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWMMSGS*GVRGIR
Trigger: ACGGATCCCACGAACACCTCATGAGCCAGACATCAT...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGATTGCTGTCGCTGGATaGTGTCTGGCTCATGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWIAVAG*CLAHEV
Trigger: CACCTCATGAGCCAGACATCATCCAGCGACAGCAAT...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGCCCTTTCTATGGTGGTaGCAGCTTTCACCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWPFLWW*QLSPEL
Trigger: CAGCTCAGGTGAAAGCTGTCACCACCATAGAAAGGG...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTCTGGGGAGGAAGGCCTaGGGCAGGTTTGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SCPARLTNHHRTNSESLFLGRKA*GRFGVA
Trigger: AGCAACCCCAAACCTGCCTCAGGCCTTCCTCCCCAG...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTGGCATACTTCAAGGTTaGCAGCGTGCTGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRGILQG*QRAGLP
Trigger: GGGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCC...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAACGAGTGTACCCTCTCTaGCAGCAGCAGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKRVYPL*QQQAAE
Trigger: CTCTGCTGCCTGCTGCTGGCAGAGAGGGTACACTCG...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTCCACATGCACGATGGTaGTGCTGTAGCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRPHARW*CCSCTG
Trigger: GCCAGTGCAGCTACAGCAGCACCATCGTGCATGTGG...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTCGGGGCTGGGACCTCTaGAGCAGCTTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCPARLTNHHRTNSESLFRGWDL*SSFSFS
Trigger: GGAGAAGCTGAAGCTGCTGCAGAGGTCCCAGCCCCG...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACGGAGCACAGCCTGGGTaGGCTGAGGTGCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYGAQPG*AEVPLA
Trigger: AGCCAGGGGCACCTCAGCCCACCCAGGCTGTGCTCC...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAAATGTCCACGTCTTCCTaGAGCACAGCCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKMSTSS*STAWVG
Trigger: GCCCACCCAGGCTGTGCTCCAGGAAGACGTGGACAT...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACAGGTTGCCAGCGTGCTaGCCTTCCCCTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLLSTLRIRLVREAAVCNRLPAC*PSPWPS
Trigger: AGAAGGCCAAGGGGAAGGCCAGCACGCTGGCAACCT...GTTACAGACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTCCACTGGAGCCGCTGTaGGGGACAGGCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: SCPARLTNHHRTNSESLFPLEPL*GTGCIS
Trigger: ACTGATGCAGCCTGTCCCCCACAGCGGCTCCAGTGG...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TTAGACCATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCGCACTGACCTCTGTGTaGCTGGTCACCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LDHLLSTLRIRLVREAAVALTSV*LVTLEG
Trigger: GCCCTCCAAGGTGACCAGCCACACAGAGGTCAGTGC...GACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATGGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAAAGGTCGGTGGGACACTaGTCCTCCAGACCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKRSVGH*SSRPCA
Trigger: AGCACAGGGTCTGGAGGACCAGTGTCCCACCGACCT...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCTGCTGTCGTCTGTGTTaGCCATCAGCAGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: SLLPATSWCYVSEQSTGACCRLC*PSAARW
Trigger: CCATCTGGCTGCTGATGGCCAACACAGACGACAGCA...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGGTGTGTGGGTTGTTGTaGAGATCCTCTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWVCGLL*RSSSQE
Trigger: CTCCTGAGAAGAGGATCTTCACAACAACCCACACAC...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGATGGCATCACTGTTCTaGGTGTCTGAGGGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPMASLF*VSEGSL
Trigger: CAACGAGCCCTCAGACACTCAGAACAGTGATGCCAT...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTTCAAGGTTGCCAGCGTaGTGGCCTTCCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SCPARLTNHHRTNSESLFSRLPA*WPSPWP
Trigger: AGGCCAAGGGGAAGGCCAGCACGCTGGCAACCTTGA...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGCCTCAACCTGCTCCATaGTGTAGGAAGGCACATCCA +
Preference number: 4 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPPQPAP*CRKAHP
Trigger: TGGATGTGCCTTCCTACAGCATGGAGCAGGTTGAGG...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACACCTCCCTGAACCTCTaGAGGAAGCCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HLLSTLRIRLVREAAVCNTSLNL*RKPCSS
Trigger: AGAGGAGCAGGGCTTCCTGCAGAGGTTCAGGGAGGT...GTTACAGACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACGCCGATCCCGAGATGTaGCAGATGTGCAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HLLSTLRIRLVREAAVCNADPEM*QMCSPD
Trigger: GTCTGGACTGCACATCTGGCACATCTCGGGATCGGC...GTTACAGACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCCGGTCGCTGGGGTaGAGCTGCACGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: IRLVREAAVCNIEFPLKHGRSLG*SCTSTG
Trigger: GCCTGTGCTCGTGCAGCTCCACCCCAGCGACCGGCC...ATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAGTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTGTTTGGGGTTGCTGGTaGGAACGGGTAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGVWGCW*ERVAGQ
Trigger: CTGCCCAGCTACCCGTTCCCACCAGCAACCCCAAAC...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTCTCTGCAGGAAGCCCTaGTCCTCTCTCTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRLCRKP*SSLCVC
Trigger: ACATACACAGAGAGAGGAGCAGGGCTTCCTGCAGAG...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACTGGCAGGGGCTGCACTaGGAATTCAGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYWQGLH*EFRLGA
Trigger: GGCACCCAGCCTGAATTCGCAGTGCAGCCCCTGCCA...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTTCCGGGATGGGATGTTaGCTGGGAACTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGSGMGC*LGTRTS
Trigger: GGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGA...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAATCCCGGGAGGGCAGCTaGTATGTCATCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKSREGS*YVIMML
Trigger: CAGCATCATGATGACATACCAGCTGCCCTCCCGGGA...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp ACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCATGCACTCCTGAGTaGAAGAATCTAAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TFKSNDSSLVMSRSTRGHPCTPE*KNLSRC
Trigger: GCAGCGGCTTAGATTCTTTCACTCAGGAGTGCATGG...GTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp CCTGAGGACCATGAGGCAGCCTCCATGACAACACAGACCACCTCAGTCTCAAGTAGTCTTGACGCGTTTTaGCTTCAGTTTCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PEDHEAASMTTQTTSVSSSLDAF*LQFPVL
Trigger: AAGAACAGGAAACTGAAGTCAAAACGCGTCAAGACT...ACTTGAGACTGAGGTGGTCTGTGTTGTCATGGAGGCTGCCTCATGGTCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCTCCTCTTTGGCTTCTaGGGTATCACAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGLLFGF*GITESR
Trigger: CCGGGACTCTGTGATACCTCAGAAGCCAAAGAGGAG...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAAAGGGCTGGCTCTCACTaGACATTAGCAGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKRAGSH*TLAAGS
Trigger: ACTACCAGCTGCTAATGTCCAGTGAGAGCCAGCCCT...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTAAGGAGAAACGTGACTTTTaGTTTGAATCTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PQAGPEAKAATPCSKPRKEKRDF*FESCHW
Trigger: CCAGTGGCAAGATTCAAACCAAAAGTCACGTTTCTC...CTTACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATAAGCTGGCACTGCGGTaGGGAAGGGTGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: IRLVREAAVCNIEFPLKHKLALR*GRVQRG
Trigger: GCCCCTCTGCACCCTTCCCCACCGCAGTGCCAGCTT...ATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACGAAAGTGAGGCTGGCTaGGGAGGAAGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYESEAG*GGRPEA
Trigger: TGCCTCAGGCCTTCCTCCCCAGCCAGCCTCACTTTC...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACCTAGGGAACTCAGCCTaGGAGGCAGGAGTTATTTCG +
Preference number: 4 (lower is better)
Translates to: HLLSTLRIRLVREAAVCNLGNSA*EAGVIS
Trigger: CGAAATAACTCCTGCCTCCCAGGCTGAGTTCCCTAG...GTTACAGACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR TCA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAAGTATTTGCTGGTGTaGCTTGTGTCACTACTGCCT +
Preference number: 4 (lower is better)
Translates to: SLLPATSWCYVSEQSTGAKYLLV*LVSLLP
Trigger: AGGCAGTAGTGACACAAGTCACACCAGCAAATACTT...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCCATTTCTGCAACAGATaGTTCCTTCTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLLPATSWCYVSEQSTGAHFCNR*FLLSSR
Trigger: TCTGGAGGACAGAAGGAAGCATCTGTTGCAGAAATG...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACGCTCCTTGGTGGGACTaGTGGGACTTGGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYAPWWD*WDLGRS
Trigger: ACTTCTCCCCAAGTCCCACCAGTCCCACCAAGGAGC...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAAGGGCTGAGGTGCCCCTaGCTCCTTGGTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKGLRCP*LLGGTG
Trigger: ACCAGTCCCACCAAGGAGCCAGGGGCACCTCAGCCC...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGAGGACATTGGCAAGATGGAGGCCACTTaGTTAGAGATGTACAGGATC +
Preference number: 4 (lower is better)
Translates to: PHPGVMFQNNPQGPEDIGKMEAT*LEMYRI
Trigger: GATCCTGTACATCTCTAACCAAGTGGCCTCCATCTT...GCCAATGTCCTCTGGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAAGAAGCTTGTAAGGGGTaGTGTAGCTGTGGAACACAC +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKEACKG*CSCGTH
Trigger: GTGTGTTCCACAGCTACACCACCCCTTACAAGCTTC...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp CACCACAGGCAGGACCTGAAGCCAAAGCTGCTACACCATGCTCCAAACCACGTATTCCAAAGTATTTGCTaGTGTGACTTGTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: HHRQDLKPKLLHHAPNHVFQSIC*CDLCHY
Trigger: GTAGTGACACAAGTCACACCAGCAAATACTTTGGAA...TACGTGGTTTGGAGCATGGTGTAGCAGCTTTGGCTTCAGGTCCTGCCTGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp TCTTGTCCGGCAAGGCTCACGAATCATCATCGCACAAACTCTGAGAGCTTATTTACTCCTCTTGGCCATTaGTGTCGCTGGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: SCPARLTNHHRTNSESLFTPLGH*CRWMMS
Trigger: AGACATCATCCAGCGACAGCAATGGCCAAGAGGAGT...AAATAAGCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp ACCACCTCAGTCTCAAGTTCAATGACGAATCTCACCCCATCCCCCAAATTCCGTGCTGCTTTGCATTTCTaGAACAGATGCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSSSMTNLTPSPKFRAALHF*NRCFLL
Trigger: CAGAAGGAAGCATCTGTTGCAGAAATGCAAAGCAGC...ACGGAATTTGGGGGATGGGGTGAGATTCGTCATTGAACTTGAGACTGAGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACCTCTCTCTGTGTATGTaGAGCCAGAACTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLLSTLRIRLVREAAVCNLSLCM*SQNFLG
Trigger: ACCAAGGAAGTTCTGGCTGCACATACACAGAGAGAG...GTTACAGACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp TCTACTTTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTTGCATCAGTAGCCGGTaGATTTGTTCTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: STFKSNDSSLVMSRSTRGCISSR*ICSVSS
Trigger: GGAGCTCACAGAACAAATCCACCGGCTACTGATGCA...ACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAACACTTGACGTGGAGATaGCATCACTGTTCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VAAFCWELMSERVQPKNKHLTWR*HHCSEC
Trigger: ACACTCAGAACAGTGATGCCATCTCCACGTCAAGTG...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 72 bp CACAAATATATTGCACTGGGTGAAGGTACGTTTGGTTaGCGCATGAACAAACCTCTTGTCCGGCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HKYIALGEGTFG*RMNKPLVRQGS
Trigger: TGAGCCTTGCCGGACAAGAGGTTTGTTCATGCGCAAACCAAACGTACCTTCACCCAGTGCAATATATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAACGCCCACATGCACGATaGTGCTGCTGTAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKRPHAR*CCCSCT
Trigger: AGTGCAGCTACAGCAGCACCATCGTGCATGTGGGCG...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATTTTCGGAGGCAAGTGTaGGGTGGGCTGGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: IRLVREAAVCNIEFPLKHFRRQV*GGLESE
Trigger: CTCACTTTCCAGCCCACCCCACACTTGCCTCCGAAA...ATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR GCA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACTATCAGTTCTTTGTGTaGGTCAGCTTTGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYYQFFV*VSFGRL
Trigger: CAGTCTGCCAAAGCTGACGCACACAAAGAACTGATA...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CCA 90 bp ATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATTGTAGGATCTTCTTGTaGATGGCGAGCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: IRLVREAAVCNIEFPLKHCRIFL*MASIKG
Trigger: GCCCTTGATGCTCGCCATCCACAAGAAGATCCTACA...ATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
3UTR CAA 72 bp GTAAGCACACATTCTAAAGAAAACAGGGCTGGATGCTaGGCATCTTGTAAACAGATTCACAAAATTATCCTA +
Preference number: 4 (lower is better)
Translates to: VSTHSKENRAGC*ASCKQIHKIIL
Trigger: TAGGATAATTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAATGTGTGCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp TCACCTTGGAGGGCCGCGCTGCCTCTCCAGAGTGCAGCCCGGGGCTaGCTGTGGCCTTCCGGGATGGGATGTTGGCTGGGAACTCGCACT +
Preference number: 5 (lower is better)
Translates to: SPWRAALPLQSAARG*LWPSGMGCWLGTRT
Trigger: AGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCACTCTGGAGAGGCAGCGCGGCCCTCCAAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp CTGCCGATCCCGAGATGTGCCAGATGTGCAGTCCAGACCAGAAGCTaGTGTCCCTGTGGTCCCCAGGGTCCCTGCGGCTCCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LPIPRCARCAVQTRS*CPCGPQGPCGSSAA
Trigger: GGCAGCACTGGAGCCGCAGGGACCCTGGGGACCACAGGGACAGCAGCTTCTGGTCTGGACTGCACATCTGGCACATCTCGGGATCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GTGCAGCCCGGGGCTGACTGTGGCCTTCCGGGATGGGATGTTGGCTaGGAACTCGCACTTCCTTTTCAGGGTGGCTGCCTCGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VQPGADCGLPGWDVG*ELALPFQGGCLAAA
Trigger: AGCTGCAGCGAGGCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GAGATGTGCCAGATGTGCAGTCCAGACCAGAAGCTGCTGTCCCTGTaGTCCCCAGGGTCCCTGCGGCTCCAGTGCTGCCTTCAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: EMCQMCSPDQKLLSL*SPGSLRLQCCLQAP
Trigger: AGGCGCCTGAAGGCAGCACTGGAGCCGCAGGGACCCTGGGGACCACAGGGACAGCAGCTTCTGGTCTGGACTGCACATCTGGCACATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp ACTGGGATGTGTCGGAGGGTGACCAGGCTGTGGCATTCAGGCCCATaGGGGGAGGTCGGTGGGACACTGGTCCTCCAGACCCTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: TGMCRRVTRLWHSGP*GEVGGTLVLQTLCS
Trigger: AGAGCACAGGGTCTGGAGGACCAGTGTCCCACCGACCTCCCCTCATGGGCCTGAATGCCACAGCCTGGTCACCCTCCGACACATCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp GAGAGTCCCGTCCCGTGGAGCAGTTCTCGTTTCCGCTGGAGCCACTaGTCATGTCCACGTCTTCCTGGAGCACAGCCTGGGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ESPVPWSSSRFRWSH*SCPRLPGAQPGWAE
Trigger: CTCAGCCCACCCAGGCTGTGCTCCAGGAAGACGTGGACATGAGCAGTGGCTCCAGCGGAAACGAGAACTGCTCCACGGGACGGGACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp TGCCTCTCCAGAGTGCAGCCCGGGGCTGACTGTGGCCTTCCGGGATaGGATGTTGGCTGGGAACTCGCACTTCCTTTTCAGGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CLSRVQPGADCGLPG*DVGWELALPFQGGC
Trigger: GCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCACTCTGGAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GCTGGGCAGCATGAAGGCCATGACAGGAGCCAAAGGGGCAGCGAATaGCAGGGGCTGCACTGCGAATTCAGGCTGGGTGCCCATAGGCAC +
Preference number: 5 (lower is better)
Translates to: AGQHEGHDRSQRGSE*QGLHCEFRLGAHRH
Trigger: GTGCCTATGGGCACCCAGCCTGAATTCGCAGTGCAGCCCCTGCCATTCGCTGCCCCTTTGGCTCCTGTCATGGCCTTCATGCTGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp AGGCTGGCTGGGGAGGAAGGCCTGAGGCAGGTTTGGGGTTGCTGGTaGGAACGGGTAGCTGGGCAGCATGAAGGCCATGACAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: RLAGEEGLRQVWGCW*ERVAGQHEGHDRSQ
Trigger: TTGGCTCCTGTCATGGCCTTCATGCTGCCCAGCTACCCGTTCCCACCAGCAACCCCAAACCTGCCTCAGGCCTTCCTCCCCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GCGCACGGCTGTCTGAGCGTCGAGGTCCGACTAGGGAACTCAGCCTaGGAGGCAGGAGTTATTTCGGAGGCAAGTGTGGGGTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AHGCLSVEVRLGNSA*EAGVISEASVGWAG
Trigger: TCCAGCCCACCCCACACTTGCCTCCGAAATAACTCCTGCCTCCCAGGCTGAGTTCCCTAGTCGGACCTCGACGCTCAGACAGCCGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp CCAGGCTGTGGCATTCAGGCCCATGAGGGGAGGTCGGTGGGACACTaGTCCTCCAGACCCTGTGCTCTCAGAAGAGTCCCGAGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: PGCGIQAHEGRSVGH*SSRPCALRRVPSLD
Trigger: GTCAAGACTCGGGACTCTTCTGAGAGCACAGGGTCTGGAGGACCAGTGTCCCACCGACCTCCCCTCATGGGCCTGAATGCCACAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GCCAAAGGGGCAGCGAATGGCAGGGGCTGCACTGCGAATTCAGGCTaGGTGCCCATAGGCACAACAGGCATGGTGAAGCCAGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: AKGAANGRGCTANSG*VPIGTTGMVKPVWV
Trigger: CACCCACACTGGCTTCACCATGCCTGTTGTGCCTATGGGCACCCAGCCTGAATTCGCAGTGCAGCCCCTGCCATTCGCTGCCCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGGGTGCCCCTGGCTCCTaGGTGGGACTGGTGGGACTT +
Preference number: 5 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQGAPGS*VGLVGL
Trigger: AAGTCCCACCAGTCCCACCAAGGAGCCAGGGGCACC...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp ATTCCACGAGCATCCGCAGCTCCTTCCCATTGTCGTCGCAGTCACTaGCCTGAGAGTCCCGTCCCGTGGAGCAGTTCTCGTTTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: IPRASAAPSHCRRSH*PESPVPWSSSRFRW
Trigger: CCAGCGGAAACGAGAACTGCTCCACGGGACGGGACTCTCAGGGCAGTGACTGCGACGACAATGGGAAGGAGCTGCGGATGCTCGTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp TCACCTGCTTCACGCTCCGCAGGGCATACTTCAAGGTTGCCAGCGTaGTGGCCTTCCCCTTGGCCTTCTTGTCTGCAGGGAGGTGGACCT +
Preference number: 5 (lower is better)
Translates to: SPASRSAGHTSRLPA*WPSPWPSCLQGGGP
Trigger: AGGTCCACCTCCCTGCAGACAAGAAGGCCAAGGGGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCCCTGCGGAGCGTGAAGCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp ATGTTGGAGGTGCCTTTGGCTGCCGATCCCGAGATGTGCCAGATGTaGAGTCCAGACCAGAAGCTGCTGTCCCTGTGGTCCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: MLEVPLAADPEMCQM*SPDQKLLSLWSPGS
Trigger: GGACCCTGGGGACCACAGGGACAGCAGCTTCTGGTCTGGACTGCACATCTGGCACATCTCGGGATCGGCAGCCAAAGGCACCTCCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp CCTTCCCATTGTCGTCGCAGTCACTGCCCTGAGAGTCCCGTCCCGTaGAGCAGTTCTCGTTTCCGCTGGAGCCACTGCTCATGTCCACGT +
Preference number: 5 (lower is better)
Translates to: PSHCRRSHCPESPVP*SSSRFRWSHCSCPR
Trigger: ACGTGGACATGAGCAGTGGCTCCAGCGGAAACGAGAACTGCTCCACGGGACGGGACTCTCAGGGCAGTGACTGCGACGACAATGGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp CCTGCTTCACGCTCCGCAGGGCATACTTCAAGGTTGCCAGCGTGCTaGCCTTCCCCTTGGCCTTCTTGTCTGCAGGGAGGTGGACCTTCA +
Preference number: 5 (lower is better)
Translates to: PASRSAGHTSRLPAC*PSPWPSCLQGGGPS
Trigger: TGAAGGTCCACCTCCCTGCAGACAAGAAGGCCAAGGGGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCCCTGCGGAGCGTGAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGCGCAGCTCCTTCCCATaGTCGTCGCAGTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQRSSFP*SSQSLP
Trigger: GGGCAGTGACTGCGACGACAATGGGAAGGAGCTGCG...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp GCAGGCAGCAGAGCTGGCTCTCAGCACCCTGCTGCTCTTGCACCTTaGCCAGGTAGGGTGTCATGCGGAAGGGCTGGTAGCGAATCTCAT +
Preference number: 5 (lower is better)
Translates to: AGSRAGSQHPAALAP*PGRVSCGRAGSESH
Trigger: ATGAGATTCGCTACCAGCCCTTCCGCATGACACCCTACCTGGTCAAGGTGCAAGAGCAGCAGGGTGCTGAGAGCCAGCTCTGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp CTCTGTGTATGTGCAGCCAGAACTTCCTTGGTGAGGCCCAACTTCTaGAGAGGCCCCTTTTCTTGGCTGAGGCCGCCGGCCGCACCATCC +
Preference number: 5 (lower is better)
Translates to: LCVCAARTSLVRPNF*RGPFSWLRPPAAPS
Trigger: GGATGGTGCGGCCGGCGGCCTCAGCCAAGAAAAGGGGCCTCTTCAGAAGTTGGGCCTCACCAAGGAAGTTCTGGCTGCACATACACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp AGGGTCCCTGCGGCTCCAGTGCTGCCTTCAGGCGCCTCCTCTAGCTaGAGCAGGTTAAGTTGTAGGGGACTACTGCCTCTGGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: RVPAAPVLPSGASSS*SRLSCRGLLPLDWK
Trigger: CTTCCAGTCCAGAGGCAGTAGTCCCCTACAACTTAACCTGCTTCAGCTAGAGGAGGCGCCTGAAGGCAGCACTGGAGCCGCAGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp GGGCTGAGCCAGTGGCCGAGCAGAGGTCCTCGCCCAGAAGGAGGTTaGGCAGGTCACTTGACGTGGAGATGGCATCACTGTTCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: GLSQWPSRGPRPEGG*AGHLTWRWHHCSEC
Trigger: ACACTCAGAACAGTGATGCCATCTCCACGTCAAGTGACCTGCTCAACCTCCTTCTGGGCGAGGACCTCTGCTCGGCCACTGGCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp GGCAGACTGCTCACTACTGCAGCCGCTCGTGGAGGGGTTGTGCTCTaGCTCTGTCATCATGAGTCTGAAGGCATCATCAGGGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRLLTTAAARGGVVL*LCHHESEGIIRAGV
Trigger: CACCCCAGCCCTGATGATGCCTTCAGACTCATGATGACAGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp CTGAACGCTGGGGTGCGGAGTCTTCTCCTCTGGGCACGGGGAGGCTaGGAACACATCCTCATTCAAAGGGCCTACCCTGACTTTGTGCCT +
Preference number: 5 (lower is better)
Translates to: LNAGVRSLLLWARGG*EHILIQRAYPDFVP
Trigger: AGGCACAAAGTCAGGGTAGGCCCTTTGAATGAGGATGTGTTCGCAGCCTCCCCGTGCCCAGAGGAGAAGACTCCGCACCCCAGCGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp ATGAAGGCCATGACAGGAGCCAAAGGGGCAGCGAATGGCAGGGGCTaGACTGCGAATTCAGGCTGGGTGCCCATAGGCACAACAGGCATG +
Preference number: 5 (lower is better)
Translates to: MKAMTGAKGAANGRG*TANSGWVPIGTTGM
Trigger: CATGCCTGTTGTGCCTATGGGCACCCAGCCTGAATTCGCAGTGCAGCCCCTGCCATTCGCTGCCCCTTTGGCTCCTGTCATGGCCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp GCTCGTTGCATGTTGGAGGTGCCTTTGGCTGCCGATCCCGAGATGTaGCAGATGTGCAGTCCAGACCAGAAGCTGCTGTCCCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: ARCMLEVPLAADPEM*QMCSPDQKLLSLWS
Trigger: GGACCACAGGGACAGCAGCTTCTGGTCTGGACTGCACATCTGGCACATCTCGGGATCGGCAGCCAAAGGCACCTCCAACATGCAACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp GGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGACACGGGGGCATACTTCAAGGTaGCCAGCGTGCTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GVLYSNKAWLAEATMQTRGHTSR*PACWPS
Trigger: GGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCCC...CCGTGTCTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp ACTCAGGGCAGCAGTGTGGGTGCCCTCTCCTCCGTGCTCAGTGGCTGCTTTCTGATGCTGTCGTCTGTGTaGGCCATCAGCAGCCAGATG +
Preference number: 5 (lower is better)
Translates to: TQGSSVGALSSVLSGCFLMLSSV*AISSQM
Trigger: CATCTGGCTGCTGATGGCCAACACAGACGACAGCAT...CAGAAAGCAGCCACTGAGCACGGAGGAGAGGGCACCCACACTGCTGCCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp TCAACACCGCCTGGAGATCCCGGGAGGGCAGCTGGTATGTCATCATaGTGCTGTCGTCTGTGTTGGCCATCAGCAGCCAGATGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: STPPGDPGRAAGMSS*CCRLCWPSAARWGP
Trigger: AGGACCCCATCTGGCTGCTGATGGCCAACACAGACGACAGCATCATGATGACATACCAGCTGCCCTCCCGGGATCTCCAGGCGGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp GGATGGGATGTTGGCTGGGAACTCGCACTTCCTTTTCAGGGTGGCTaGCTCGCTGCAGCTCTCCAGGTACCTGATGACACTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GWDVGWELALPFQGG*LAAALQVPDDTVQA
Trigger: TGCCTGGACAGTGTCATCAGGTACCTGGAGAGCTGCAGCGAGGCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp TTGTTCTGTGAGCTCCTGAACGCTGGGGTGCGGAGTCTTCTCCTCTaGGCACGGGGAGGCTGCGAACACATCCTCATTCAAAGGGCCTAC +
Preference number: 5 (lower is better)
Translates to: LFCELLNAGVRSLLL*ARGGCEHILIQRAY
Trigger: GTAGGCCCTTTGAATGAGGATGTGTTCGCAGCCTCCCCGTGCCCAGAGGAGAAGACTCCGCACCCCAGCGTTCAGGAGCTCACAGAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp TCCTGGTCCTCCTTCAACACCGCCTGGAGATCCCGGGAGGGCAGCTaGTATGTCATCATGATGCTGTCGTCTGTGTTGGCCATCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SWSSFNTAWRSREGS*YVIMMLSSVLAISS
Trigger: GCTGCTGATGGCCAACACAGACGACAGCATCATGATGACATACCAGCTGCCCTCCCGGGATCTCCAGGCGGTGTTGAAGGAGGACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CCTGGCTTGCAGAGGCCACCATGCAGACACGGCAACATGGCTGATGATGCCACAGTGATGTACTCCCCGTaGCGGGTGCGGAATCGAATG +
Preference number: 5 (lower is better)
Translates to: PGLQRPPCRHGNMADDATVMYSP*RVRNRM
Trigger: CATTCGATTCCGCACCCGCAACGGGGAGTACATCAC...TGTGGCATCATCAGCCATGTTGCCGTGTCTGCATGGTGGCCTCTGCAAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGTCTGGGAAGCTGGCCTaGGGTAGGCTGGCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWSGKLA*GRLAPE
Trigger: CTCAGGGGCCAGCCTACCCAAGGCCAGCTTCCCAGA...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp GAGACTCCTCTTGGCCATTGCTGTCGCTGGATGATGTCTGGCTCATaGGGTGTTCGTGGGATCCGTTACTGCCCAGGCTCCCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: ETPLGHCCRWMMSGS*GVRGIRYCPGSHSH
Trigger: GTGGCTATGGGAGCCTGGGCAGTAACGGATCCCACGAACACCTCATGAGCCAGACATCATCCAGCGACAGCAATGGCCAAGAGGAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp GGATCTCCTCCGGTGAGACTCCTCTTGGCCATTGCTGTCGCTGGATaGTGTCTGGCTCATGAGGTGTTCGTGGGATCCGTTACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSPPVRLLLAIAVAG*CLAHEVFVGSVTAQ
Trigger: CTGGGCAGTAACGGATCCCACGAACACCTCATGAGCCAGACATCATCCAGCGACAGCAATGGCCAAGAGGAGTCTCACCGGAGGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp GCTTTGGCAGACTGCTCACTACTGCAGCCGCTCGTGGAGGGGTTGTaGTCTGCCTCTGTCATCATGAGTCTGAAGGCATCATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ALADCSLLQPLVEGL*SASVIMSLKASSGL
Trigger: CAGCCCTGATGATGCCTTCAGACTCATGATGACAGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp AGGAGCAAGGAGGCTGGTTCTTATAGGCTAGTTCCTCTGGGAAGCTaGCCTTGGGTAGGCTGGCCCCTGAGCTGTCCCTTTCTATGGTGG +
Preference number: 5 (lower is better)
Translates to: RSKEAGSYRLVPLGS*PWVGWPLSCPFLWW
Trigger: CCACCATAGAAAGGGACAGCTCAGGGGCCAGCCTACCCAAGGCCAGCTTCCCAGAGGAACTAGCCTATAAGAACCAGCCTCCTTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 90 bp GGGCCTCTATCCTGGGGCCTGTCAGCTGTTCACCTTCCTCCTCTTTaGCTTCTGAGGTATCACAGAGTCCCGGGGAAGGACTGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPLSWGLSAVHLPPL*LLRYHRVPGKDCLP
Trigger: AGGAAGACAGTCCTTCCCCGGGACTCTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTGAACAGCTGACAGGCCCCAGGATAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp AGAAACCACAAGATCTTCCCCCTCTTCCGAGCACCGTCTAATGTCGACCTCTGGGTGCTGGCCTTCCCCTaGGCCTTCTTGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RNHKIFPLFRAPSNVDLWVLAFP*AFLSAG
Trigger: CCCTGCAGACAAGAAGGCCAAGGGGAAGGCCAGCAC...CCAGAGGTCGACATTAGACGGTGCTCGGAAGAGGGGGAAGATCTTGTGGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp TTGACGTGGAGATGGCATCACTGTTCTGAGTGTCTGAGGGCTCGTTaGATGTTGGAGGTGCCTTTGGCTGCCGATCCCGAGATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LTWRWHHCSECLRAR*MLEVPLAADPEMCQ
Trigger: CTGGCACATCTCGGGATCGGCAGCCAAAGGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATGCCATCTCCACGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGGGGCCTACCCTGACTTaGTGCCTCCCAATGATGAAA +
Preference number: 5 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQGPTLT*CLPMMK
Trigger: TTTCATCATTGGGAGGCACAAAGTCAGGGTAGGCCC...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCAGGCCTGAGGCAGGTTaGGGGTTGCTGGTGGGAACG +
Preference number: 5 (lower is better)
Translates to: SLLPATSWCYVSEQSTGARPEAG*GLLVGT
Trigger: CGTTCCCACCAGCAACCCCAAACCTGCCTCAGGCCT...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TTTTGTAGAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTGAGGGCTCGTTGCATGTaGGAGGTGCCTTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: FCRAGQRGPLLSTGSSDLRARCM*EVPLAA
Trigger: GGCAGCCAAAGGCACCTCCAACATGCAACGAGCCCT...CAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTCTACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp AGGAGGTTGAGCAGGTCACTTGACGTGGAGATGGCATCACTGTTCTaGGTGTCTGAGGGCTCGTTGCATGTTGGAGGTGCCTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RRLSRSLDVEMASLF*VSEGSLHVGGAFGC
Trigger: GCAGCCAAAGGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATGCCATCTCCACGTCAAGTGACCTGCTCAACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp TTCAGGGTCCTTATCAGTTCTTTGTGTGCGTCAGCTTTGGCAGACTaGTCACTACTGCAGCCGCTCGTGGAGGGGTTGTGCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: FRVLISSLCASALAD*SLLQPLVEGLCSAS
Trigger: AGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAGAACTGATAAGGACCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGTATGGCAGGCAAATGTaGCCTTTCTCCTCACTCTCG +
Preference number: 5 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQYGRQM*PFSSLS
Trigger: CGAGAGTGAGGAGAAAGGCAACATTTGCCTGCCATA...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TTAGACCATCTTCTATCTACCCTTAGGATCAGACTGGTCAGAGAGGCAGCTGTCCCGCTCGTGGAGGGGTaGTGCTCTGCCTCTGTCATC +
Preference number: 5 (lower is better)
Translates to: LDHLLSTLRIRLVREAAVPLVEG*CSASVI
Trigger: GATGACAGAGGCAGAGCACAACCCCTCCACGAGCGG...GACAGCTGCCTCTCTGACCAGTCTGATCCTAAGGGTAGATAGAAGATGGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGTCGCCCAGAAGGAGGTaGAGCAGGTCACTTGACGTG +
Preference number: 5 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPSPRRR*SRSLDV
Trigger: CACGTCAAGTGACCTGCTCAACCTCCTTCTGGGCGA...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TTTTGTAGAGCTGGGCAGAGAGGTCCCCTTCTCTCCACAGGTTCCAGTGATCTGAGGAACTCCACAAACTaGGCATCACTGAAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: FCRAGQRGPLLSTGSSDLRNSTN*ASLKAS
Trigger: GGACGCCTTCAGTGATGCCAAGTTTGTGGAGTTCCT...CAGATCACTGGAACCTGTGGAGAGAAGGGGACCTCTCTGCCCAGCTCTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCTTCCTGCTCCACGGGTaGATGAAGCTGGACCAGCTA +
Preference number: 5 (lower is better)
Translates to: SLLPATSWCYVSEQSTGAFLLHG*MKLDQL
Trigger: TAGCTGGTCCAGCTTCATCAACCCGTGGAGCAGGAA...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 90 bp AGAGTCCCGGGGAAGGACTGTCTTCCTCATATGGCAGGCAAATGTTaGCTTTCTCCTCACTCTCGCAGTAAACACAGCCTGTCACATCGA +
Preference number: 5 (lower is better)
Translates to: RVPGKDCLPHMAGKC*LSPHSRSKHSLSHR
Trigger: TCGATGTGACAGGCTGTGTTTACTGCGAGAGTGAGGAGAAAGGCAACATTTGCCTGCCATATGAGGAAGACAGTCCTTCCCCGGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp GTGGCTGCTTTCTGCTGGGAGCTAATGTCTGAGAGAGTCCAACCAAAGAACAAATGGGACTGGTGGGACTaGGGGAGAAGTCCACGTATC +
Preference number: 5 (lower is better)
Translates to: VAAFCWELMSERVQPKNKWDWWD*GRSPRI
Trigger: GATACGTGGACTTCTCCCCAAGTCCCACCAGTCCCA...TTTGTTCTTTGGTTGGACTCTCTCAGACATTAGCTCCCAGCAGAAAGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TCCCTGTTACCTGCCACATCCTGGTGTTATGTTTCAGAACAATCCACAGGGGCCTTGTGTGCGTCAGCTTaGGCAGACTGCTCACTACTG +
Preference number: 5 (lower is better)
Translates to: SLLPATSWCYVSEQSTGALCASA*ADCSLL
Trigger: CAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAA...GGCCCCTGTGGATTGTTCTGAAACATAACACCAGGATGTGGCAGGTAACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CGTGACGGTGTCCTCTACAGCAACAAAGCCTGGCTTGCAGAGGCCACCATGCAGAACGTGACTTTTGGTTaGAATCTTGCCACTGGTTTT +
Preference number: 5 (lower is better)
Translates to: RDGVLYSNKAWLAEATMQNVTFG*NLATGF
Trigger: AAAACCAGTGGCAAGATTCAAACCAAAAGTCACGTT...CTGCATGGTGGCCTCTGCAAGCCAGGCTTTGTTGCTGTAGAGGACACCGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp TTTAAGTCCAATGATTCCTCACTGGTGATGTCTCGTTCCACCAGGGGTCACCCGTCACCTTCCTCCTCTTaGGCTTCTGAGGTATCACAG +
Preference number: 5 (lower is better)
Translates to: FKSNDSSLVMSRSTRGHPSPSSS*ASEVSQ
Trigger: CTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTGA...CGGGTGACCCCTGGTGGAACGAGACATCACCAGTGAGGAATCATTGGACTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACTTCCCCTTGGCCTTCTaGTCTGCAGGGAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYFPLAF*SAGRWT
Trigger: GGTCCACCTCCCTGCAGACAAGAAGGCCAAGGGGAA...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACAGCACCCTGCTGCTCTaGCACCTTGACCAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYSTLLL*HLDQVG
Trigger: CCCTACCTGGTCAAGGTGCAAGAGCAGCAGGGTGCT...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 90 bp AGGAACTCCACAAACTTGGCATCACTGAAGGCGTCCTTCTTACAGTaGAAGATGGAGGCCACTTGGTTAGAGATGTACAGGATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RNSTNLASLKASFLQ*KMEATWLEMYRIFP
Trigger: TGGGAAGATCCTGTACATCTCTAACCAAGTGGCCTCCATCTTTCACTGTAAGAAGGACGCCTTCAGTGATGCCAAGTTTGTGGAGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp ATTCTAAAGAAAACAGGGCTGGATGCTTGGCATCTTGTAAACAGATTCACAAAAACTGCCTGCCCCACTTaGGGATGTGCCGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ILKKTGLDAWHLVNRFTKTACPT*GCAEAQ
Trigger: CTGGGCTTCGGCACATCCCAAAGTGGGGCAGGCAGT...TTTTGTGAATCTGTTTACAAGATGCCAAGCATCCAGCCCTGTTTTCTTTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACATTTGCTGGTGTGACTaGTGTCACTACTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYICWCD*CHYCLP
Trigger: GGGCAGGCAGTAGTGACACAAGTCACACCAGCAAAT...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp CTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATGGCTACAAAGATGGAGGCCACTaGGTTAGAGATGTACAGGAT +
Preference number: 5 (lower is better)
Translates to: LVREAAVCNIEFPLKHGYKDGGH*VRDVQD
Trigger: ATCCTGTACATCTCTAACCAAGTGGCCTCCATCTTT...GTAGCCATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS-3UTR CAA 90 bp ATCAGACTGGTCAGAGAGGCAGCTGTCTGTAACATTGAATTTCCTTTAAAACATTGTCTGGGATCATTTTaGCTTTGTGATTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: IRLVREAAVCNIEFPLKHCLGSF*LCDYSL
Trigger: CAGAGAATAATCACAAAGCAAAAATGATCCCAGACA...ATGTTTTAAAGGAAATTCAATGTTACAGACAGCTGCCTCTCTGACCAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TCTGCCCAGGGCCACTGTGCCGGCTGGAGGGGTGACTaGGCAAGCGCACGGCTGTCTGAGCGTCGAGGTCCG +
Preference number: 6 (lower is better)
Translates to: SAQGHCAGWRGD*ASARLSERRGP
Trigger: CGGACCTCGACGCTCAGACAGCCGTGCGCTTGCCCAGTCACCCCTCCAGCCGGCACAGTGGCCCTGGGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp AGGGCCGCGCTGCCTCTCCAGAGTGCAGCCCGGGGCTaGCTGTGGCCTTCCGGGATGGGATGTTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: RAALPLQSAARG*LWPSGMGCWLG
Trigger: TCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCACTCTGGAGAGGCAGCGCGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp ATGGCCGTAGGCAGGCCCCCAGTGTGGACCCACGGATaGACCTCTCGGAGCTCTCGCCTCTGGCCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: MAVGRPPVWTHG*TSRSSRLWPSV
Trigger: CACAGAGGGCCAGAGGCGAGAGCTCCGAGAGGTTCATCCGTGGGTCCACACTGGGGGCCTGCCTACGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp TGTCGGAGGGTGACCAGGCTGTGGCATTCAGGCCCATaGGGGGAGGTCGGTGGGACACTGGTCCTCCAGACC +
Preference number: 6 (lower is better)
Translates to: CRRVTRLWHSGP*GEVGGTLVLQT
Trigger: GGTCTGGAGGACCAGTGTCCCACCGACCTCCCCTCATGGGCCTGAATGCCACAGCCTGGTCACCCTCCGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GGGTGGCTGCAGGTGGCGCCACCACCGTCCCTGGTGTaGATACTATTCCGGGTGCCTGGAACACAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: GWLQVAPPPSLV*ILFRVPGTQVG
Trigger: CCCTACCTGTGTTCCAGGCACCCGGAATAGTATCCACACCAGGGACGGTGGTGGCGCCACCTGCAGCCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 90 bp CCAGAGTGCAGCCCGGGGCTGACTGTGGCCTTCCGGGATGGGATGTaGGCTGGGAACTCGCACTTCCTTTTCAGGGTGGCTGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PECSPGLTVAFRDGM*AGNSHFLFRVAASL
Trigger: CAGCGAGGCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCTGCACTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CTCTCGGCCTTGCCTGGCAGCGTCAGGGAGCTCAGGTaGGCACTGACCTCTGTGTGGCTGGTCACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: LSALPGSVRELR*ALTSVWLVTLE
Trigger: CTCCAAGGTGACCAGCCACACAGAGGTCAGTGCTCACCTGAGCTCCCTGACGCTGCCAGGCAAGGCCGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp AGGCACAACAGGCATGGTGAAGCCAGTGTGGGTGGCTaGAGGTGGCGCCACCACCGTCCCTGGTGTGGATAC +
Preference number: 6 (lower is better)
Translates to: RHNRHGEASVGG*RWRHHRPWCGY
Trigger: GTATCCACACCAGGGACGGTGGTGGCGCCACCTGCAGCCACCCACACTGGCTTCACCATGCCTGTTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TTGTGGATGGCGAGCATCAAGGGCCGGTCGCTGGGGTaGAGCTGCACGAGCACAGGCGTCTCGATCAGATCC +
Preference number: 6 (lower is better)
Translates to: LWMASIKGRSLG*SCTSTGVSIRS
Trigger: GGATCTGATCGAGACGCCTGTGCTCGTGCAGCTCCACCCCAGCGACCGGCCCTTGATGCTCGCCATCCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GGCATTCAGGCCCATGAGGGGAGGTCGGTGGGACACTaGTCCTCCAGACCCTGTGCTCTCAGAAGAGTCCCG +
Preference number: 6 (lower is better)
Translates to: GIQAHEGRSVGH*SSRPCALRRVP
Trigger: CGGGACTCTTCTGAGAGCACAGGGTCTGGAGGACCAGTGTCCCACCGACCTCCCCTCATGGGCCTGAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp GTCCCGTGGAGCAGTTCTCGTTTCCGCTGGAGCCACTaGTCATGTCCACGTCTTCCTGGAGCACAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: VPWSSSRFRWSH*SCPRLPGAQPG
Trigger: CCCAGGCTGTGCTCCAGGAAGACGTGGACATGAGCAGTGGCTCCAGCGGAAACGAGAACTGCTCCACGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp GGGGTGCGGAGTCTTCTCCTCTGGGCACGGGGAGGCTaGGAACACATCCTCATTCAAAGGGCCTACCCTGAC +
Preference number: 6 (lower is better)
Translates to: GVRSLLLWARGG*EHILIQRAYPD
Trigger: GTCAGGGTAGGCCCTTTGAATGAGGATGTGTTCGCAGCCTCCCCGTGCCCAGAGGAGAAGACTCCGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TGTCGTCGCAGTCACTGCCCTGAGAGTCCCGTCCCGTaGAGCAGTTCTCGTTTCCGCTGGAGCCACTGCTCA +
Preference number: 6 (lower is better)
Translates to: CRRSHCPESPVP*SSSRFRWSHCS
Trigger: TGAGCAGTGGCTCCAGCGGAAACGAGAACTGCTCCACGGGACGGGACTCTCAGGGCAGTGACTGCGACGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp CGCTCCGCAGGGCATACTTCAAGGTTGCCAGCGTGCTaGCCTTCCCCTTGGCCTTCTTGTCTGCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: RSAGHTSRLPAC*PSPWPSCLQGG
Trigger: ACCTCCCTGCAGACAAGAAGGCCAAGGGGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCCCTGCGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GAGTGTACCCTCTCTGCCAGCAGCAGGCAGCAGAGCTaGCTCTCAGCACCCTGCTGCTCTTGCACCTTGACC +
Preference number: 6 (lower is better)
Translates to: ECTLSASSRQQS*LSAPCCSCTLT
Trigger: GGTCAAGGTGCAAGAGCAGCAGGGTGCTGAGAGCCAGCTCTGCTGCCTGCTGCTGGCAGAGAGGGTACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TCGAAAGGCTGTCCACCGGCCTGTAGGATCTTCTTGTaGATGGCGAGCATCAAGGGCCGGTCGCTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SKGCPPACRIFL*MASIKGRSLGW
Trigger: CCACCCCAGCGACCGGCCCTTGATGCTCGCCATCCACAAGAAGATCCTACAGGCCGGTGGACAGCCTTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GGGGCTGACTGTGGCCTTCCGGGATGGGATGTTGGCTaGGAACTCGCACTTCCTTTTCAGGGTGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GADCGLPGWDVG*ELALPFQGGCL
Trigger: GAGGCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp AGCCCGGGGCTGACTGTGGCCTTCCGGGATGGGATGTaGGCTGGGAACTCGCACTTCCTTTTCAGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: SPGLTVAFRDGM*AGNSHFLFRVA
Trigger: AGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAACATCCCATCCCGGAAGGCCACAGTCAGCCCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp AGAGCTGGCTCTCAGCACCCTGCTGCTCTTGCACCTTaGCCAGGTAGGGTGTCATGCGGAAGGGCTGGTAGC +
Preference number: 6 (lower is better)
Translates to: RAGSQHPAALAP*PGRVSCGRAGS
Trigger: GCTACCAGCCCTTCCGCATGACACCCTACCTGGTCAAGGTGCAAGAGCAGCAGGGTGCTGAGAGCCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp ATGACAGGAGCCAAAGGGGCAGCGAATGGCAGGGGCTaGACTGCGAATTCAGGCTGGGTGCCCATAGGCACA +
Preference number: 6 (lower is better)
Translates to: MTGAKGAANGRG*TANSGWVPIGT
Trigger: TGTGCCTATGGGCACCCAGCCTGAATTCGCAGTGCAGCCCCTGCCATTCGCTGCCCCTTTGGCTCCTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp GTGCCTTTGGCTGCCGATCCCGAGATGTGCCAGATGTaGAGTCCAGACCAGAAGCTGCTGTCCCTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: VPLAADPEMCQM*SPDQKLLSLWS
Trigger: GGACCACAGGGACAGCAGCTTCTGGTCTGGACTGCACATCTGGCACATCTCGGGATCGGCAGCCAAAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GAGCTCCTGAACGCTGGGGTGCGGAGTCTTCTCCTCTaGGCACGGGGAGGCTGCGAACACATCCTCATTCAA +
Preference number: 6 (lower is better)
Translates to: ELLNAGVRSLLL*ARGGCEHILIQ
Trigger: TTGAATGAGGATGTGTTCGCAGCCTCCCCGTGCCCAGAGGAGAAGACTCCGCACCCCAGCGTTCAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp AACAGGCATGGTGAAGCCAGTGTGGGTGGCTGCAGGTaGCGCCACCACCGTCCCTGGTGTGGATACTATTCC +
Preference number: 6 (lower is better)
Translates to: NRHGEASVGGCR*RHHRPWCGYYS
Trigger: GGAATAGTATCCACACCAGGGACGGTGGTGGCGCCACCTGCAGCCACCCACACTGGCTTCACCATGCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp GCGGCTCCAGTGCTGCCTTCAGGCGCCTCCTCTAGCTaGAGCAGGTTAAGTTGTAGGGGACTACTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: AAPVLPSGASSS*SRLSCRGLLPL
Trigger: CAGAGGCAGTAGTCCCCTACAACTTAACCTGCTTCAGCTAGAGGAGGCGCCTGAAGGCAGCACTGGAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CAGTGGCCGAGCAGAGGTCCTCGCCCAGAAGGAGGTTaGGCAGGTCACTTGACGTGGAGATGGCATCACTGT +
Preference number: 6 (lower is better)
Translates to: QWPSRGPRPEGG*AGHLTWRWHHC
Trigger: ACAGTGATGCCATCTCCACGTCAAGTGACCTGCTCAACCTCCTTCTGGGCGAGGACCTCTGCTCGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp CTTTGTGTGCGTCAGCTTTGGCAGACTGCTCACTACTaGAGCCGCTCGTGGAGGGGTTGTGCTCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LCVRQLWQTAHY*SRSWRGCALPL
Trigger: CAGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp TGCAGGGCACTGAGCCTGCTCACCTCCCTGAACCTCTaGAGGAAGCCCTGCTCCTCTCTCTGTGTATGTGCA +
Preference number: 6 (lower is better)
Translates to: CRALSLLTSLNL*RKPCSSLCVCA
Trigger: TGCACATACACAGAGAGAGGAGCAGGGCTTCCTGCAGAGGTTCAGGGAGGTGAGCAGGCTCAGTGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TGTCTGAGCGTCGAGGTCCGACTAGGGAACTCAGCCTaGGAGGCAGGAGTTATTTCGGAGGCAAGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: CLSVEVRLGNSA*EAGVISEASVG
Trigger: CCCCACACTTGCCTCCGAAATAACTCCTGCCTCCCAGGCTGAGTTCCCTAGTCGGACCTCGACGCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp TCACCTGCTTCACGCTCCGCAGGGCATACTTCAAGGTaGCCAGCGTGCTGGCCTTCCCCTTGGCCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: SPASRSAGHTSR*PACWPSPWPSC
Trigger: ACAAGAAGGCCAAGGGGAAGGCCAGCACGCTGGCAACCTTGAAGTATGCCCTGCGGAGCGTGAAGCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 90 bp TGGGCCTCTATCCTGGGGCCTGTCAGCTGTTCACCTTCCTCCTCTTaGGCTTCTGAGGTATCACAGAGTCCCGGGGAAGGACTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: WASILGPVSCSPSSS*ASEVSQSPGEGLSS
Trigger: GGAAGACAGTCCTTCCCCGGGACTCTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTGAACAGCTGACAGGCCCCAGGATAGAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CTTGGCCATTGCTGTCGCTGGATGATGTCTGGCTCATaGGGTGTTCGTGGGATCCGTTACTGCCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: LGHCCRWMMSGS*GVRGIRYCPGS
Trigger: GGAGCCTGGGCAGTAACGGATCCCACGAACACCTCATGAGCCAGACATCATCCAGCGACAGCAATGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CCTGGAGATCCCGGGAGGGCAGCTGGTATGTCATCATaGTGCTGTCGTCTGTGTTGGCCATCAGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: PGDPGRAAGMSS*CCRLCWPSAAR
Trigger: TCTGGCTGCTGATGGCCAACACAGACGACAGCATCATGATGACATACCAGCTGCCCTCCCGGGATCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp GTTGGCTGGGAACTCGCACTTCCTTTTCAGGGTGGCTaGCTCGCTGCAGCTCTCCAGGTACCTGATGACACT +
Preference number: 6 (lower is better)
Translates to: VGWELALPFQGG*LAAALQVPDDT
Trigger: AGTGTCATCAGGTACCTGGAGAGCTGCAGCGAGGCAGCCACCCTGAAAAGGAAGTGCGAGTTCCCAGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GAGGCTGGTTCTTATAGGCTAGTTCCTCTGGGAAGCTaGCCTTGGGTAGGCTGGCCCCTGAGCTGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: EAGSYRLVPLGS*PWVGWPLSCPF
Trigger: AAAGGGACAGCTCAGGGGCCAGCCTACCCAAGGCCAGCTTCCCAGAGGAACTAGCCTATAAGAACCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TCCTTCAACACCGCCTGGAGATCCCGGGAGGGCAGCTaGTATGTCATCATGATGCTGTCGTCTGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SFNTAWRSREGS*YVIMMLSSVLA
Trigger: GGCCAACACAGACGACAGCATCATGATGACATACCAGCTGCCCTCCCGGGATCTCCAGGCGGTGTTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TCCTGGGGCCTGTCAGCTGTTCACCTTCCTCCTCTTTaGCTTCTGAGGTATCACAGAGTCCCGGGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SWGLSAVHLPPL*LLRYHRVPGKD
Trigger: GTCCTTCCCCGGGACTCTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTGAACAGCTGACAGGCCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp GCAGACTGCTCACTACTGCAGCCGCTCGTGGAGGGGTaGTGCTCTGCCTCTGTCATCATGAGTCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: ADCSLLQPLVEG*CSASVIMSLKA
Trigger: TGCCTTCAGACTCATGATGACAGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 90 bp GCAGGGAGGTGGACCTTCAGCTCCTTCAGGGTCCTTATCAGTTCTTaGTGTGCGTCAGCTTTGGCAGACTGCTCACTACTGCAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: AGRWTFSSFRVLISS*CASALADCSLLQPL
Trigger: GAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAGAACTGATAAGGACCCTGAAGGAGCTGAAGGTCCACCTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 90 bp TGGAGATGGCATCACTGTTCTGAGTGTCTGAGGGCTCGTTGCATGTaGGAGGTGCCTTTGGCTGCCGATCCCGAGATGTGCCAGATGTGC +
Preference number: 6 (lower is better)
Translates to: WRWHHCSECLRARCM*EVPLAADPEMCQMC
Trigger: GCACATCTGGCACATCTCGGGATCGGCAGCCAAAGGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATGCCATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CCGGTGAGACTCCTCTTGGCCATTGCTGTCGCTGGATaGTGTCTGGCTCATGAGGTGTTCGTGGGATCCGTT +
Preference number: 6 (lower is better)
Translates to: PVRLLLAIAVAG*CLAHEVFVGSV
Trigger: AACGGATCCCACGAACACCTCATGAGCCAGACATCATCCAGCGACAGCAATGGCCAAGAGGAGTCTCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp CTCACTACTGCAGCCGCTCGTGGAGGGGTTGTGCTCTaGCTCTGTCATCATGAGTCTGAAGGCATCATCAGG +
Preference number: 6 (lower is better)
Translates to: LTTAAARGGVVL*LCHHESEGIIR
Trigger: CCTGATGATGCCTTCAGACTCATGATGACAGAGGCAGAGCACAACCCCTCCACGAGCGGCTGCAGTAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp CAACCTGCTCCATGCTGTAGGAAGGCACATCCACACTaGAGGGCTGGCTCTCACTGGACATTAGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: QPAPCCRKAHPH*RAGSHWTLAAG
Trigger: ACCAGCTGCTAATGTCCAGTGAGAGCCAGCCCTGCAGTGTGGATGTGCCTTCCTACAGCATGGAGCAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp AGATGGCATCACTGTTCTGAGTGTCTGAGGGCTCGTTaGATGTTGGAGGTGCCTTTGGCTGCCGATCCCGAG +
Preference number: 6 (lower is better)
Translates to: RWHHCSECLRAR*MLEVPLAADPE
Trigger: CTCGGGATCGGCAGCCAAAGGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp GACTCCTCTTGGCCATTGCTGTCGCTGGATGATGTCTaGCTCATGAGGTGTTCGTGGGATCCGTTACTGCCC +
Preference number: 6 (lower is better)
Translates to: DSSWPLLSLDDV*LMRCSWDPLLP
Trigger: GGGCAGTAACGGATCCCACGAACACCTCATGAGCCAGACATCATCCAGCGACAGCAATGGCCAAGAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp CATCACTGTTCTGAGTGTCTGAGGGCTCGTTGCATGTaGGAGGTGCCTTTGGCTGCCGATCCCGAGATGTGC +
Preference number: 6 (lower is better)
Translates to: HHCSECLRARCM*EVPLAADPEMC
Trigger: GCACATCTCGGGATCGGCAGCCAAAGGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp ATCCTGGGGCCTGTCAGCTGTTCACCTTCCTCCTCTTaGGCTTCTGAGGTATCACAGAGTCCCGGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: ILGPVSCSPSSS*ASEVSQSPGEG
Trigger: TCCTTCCCCGGGACTCTGTGATACCTCAGAAGCCAAAGAGGAGGAAGGTGAACAGCTGACAGGCCCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp GTCATCATGAGTCTGAAGGCATCATCAGGGCTGGGGTaGGTGTTGGAAGATTCCACGAGCATCCGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VIMSLKASSGLG*VLEDSTSIRSS
Trigger: GGAGCTGCGGATGCTCGTGGAATCTTCCAACACTCACCCCAGCCCTGATGATGCCTTCAGACTCATGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp AGCAGGTCACTTGACGTGGAGATGGCATCACTGTTCTaGGTGTCTGAGGGCTCGTTGCATGTTGGAGGTGCC +
Preference number: 6 (lower is better)
Translates to: SRSLDVEMASLF*VSEGSLHVGGA
Trigger: GGCACCTCCAACATGCAACGAGCCCTCAGACACTCAGAACAGTGATGCCATCTCCACGTCAAGTGACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp CTTATCAGTTCTTTGTGTGCGTCAGCTTTGGCAGACTaGTCACTACTGCAGCCGCTCGTGGAGGGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: LISSLCASALAD*SLLQPLVEGLC
Trigger: GCACAACCCCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAGAACTGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CCA 72 bp TCAGGGTCCTTATCAGTTCTTTGTGTGCGTCAGCTTTaGCAGACTGCTCACTACTGCAGCCGCTCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SGSLSVLCVRQL*QTAHYCSRSWR
Trigger: CCTCCACGAGCGGCTGCAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAGAACTGATAAGGACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CCTCTCTCTGTGTATGTGCAGCCAGAACTTCCTTGGTaGGGCCCAACTTCTGAAGAGGCCCCTTTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: PLSVYVQPELPW*GPTSEEAPFLG
Trigger: GCCAAGAAAAGGGGCCTCTTCAGAAGTTGGGCCTCACCAAGGAAGTTCTGGCTGCACATACACAGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp AAAGTATTTGCTGGTGTGACTTGTGTCACTACTGCCTaGCCCACTTTGGGATGTGCCGAAGCCCAGCGAGCT +
Preference number: 6 (lower is better)
Translates to: KVFAGVTCVTTA*PTLGCAEAQRA
Trigger: AGCTCGCTGGGCTTCGGCACATCCCAAAGTGGGGCAGGCAGTAGTGACACAAGTCACACCAGCAAATACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp TTCCAAAGTATTTGCTGGTGTGACTTGTGTCACTACTaGCTGCCCCACTTTGGGATGTGCCGAAGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: FQSICWCDLCHY*LPHFGMCRSPA
Trigger: CGCTGGGCTTCGGCACATCCCAAAGTGGGGCAGGCAGTAGTGACACAAGTCACACCAGCAAATACTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp GAAGCTTGTAAGGGGTGGTGTAGCTGTGGAACACACTaGCGTCATGAGGAGCCAGGAACTCCACAAACTTGG +
Preference number: 6 (lower is better)
Translates to: EACKGWCSCGTH*RHEEPGTPQTW
Trigger: CCAAGTTTGTGGAGTTCCTGGCTCCTCATGACGTCAGTGTGTTCCACAGCTACACCACCCCTTACAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 90 bp GGCATCACTGAAGGCGTCCTTCTTACAGTGAAAGATGGAGGCCACTaGGTTAGAGATGTACAGGATCTTCCCAGAAACCAGGGACACAGC +
Preference number: 6 (lower is better)
Translates to: GITEGVLLTVKDGGH*VRDVQDLPRNQGHS
Trigger: GCTGTGTCCCTGGTTTCTGGGAAGATCCTGTACATCTCTAACCAAGTGGCCTCCATCTTTCACTGTAAGAAGGACGCCTTCAGTGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CATGAGGAGCCAGGAACTCCACAAACTTGGCATCACTaGAGGCGTCCTTCTTACAGTGAAAGATGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: HEEPGTPQTWHH*RRPSYSERWRP
Trigger: TGGCCTCCATCTTTCACTGTAAGAAGGACGCCTTCAGTGATGCCAAGTTTGTGGAGTTCCTGGCTCCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp CTCCAGACCCTGTGCTCTCAGAAGAGTCCCGAGTCTTaGCGCGTTTTGACTTCAGTTTCCTGTTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: LQTLCSQKSPES*RVLTSVSCSFQ
Trigger: CTGGAAAGAACAGGAAACTGAAGTCAAAACGCGTCAAGACTCGGGACTCTTCTGAGAGCACAGGGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS GCA 72 bp GGGAAGGACTGTCTTCCTCATATGGCAGGCAAATGTTaGCTTTCTCCTCACTCTCGCAGTAAACACAGCCTG +
Preference number: 6 (lower is better)
Translates to: GKDCLPHMAGKC*LSPHSRSKHSL
Trigger: CAGGCTGTGTTTACTGCGAGAGTGAGGAGAAAGGCAACATTTGCCTGCCATATGAGGAAGACAGTCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp TGGACCTTCAGCTCCTTCAGGGTCCTTATCAGTTCTTaGTGTGCGTCAGCTTTGGCAGACTGCTCACTACTG +
Preference number: 6 (lower is better)
Translates to: WTFSSFRVLISS*CASALADCSLL
Trigger: CAGTAGTGAGCAGTCTGCCAAAGCTGACGCACACAAAGAACTGATAAGGACCCTGAAGGAGCTGAAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp CCTCCAGACCCTGTGCTCTCAGAAGAGTCCCGAGTCTaGACGCGTTTTGACTTCAGTTTCCTGTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: PPDPVLSEESRV*TRFDFSFLFFP
Trigger: TGGAAAGAACAGGAAACTGAAGTCAAAACGCGTCAAGACTCGGGACTCTTCTGAGAGCACAGGGTCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp TTGCCACTGGTTTTAAAAATTCCGGATCTCCTCCGGTaGGACTCCTCTTGGCCATTGCTGTCGCTGGATGAT +
Preference number: 6 (lower is better)
Translates to: LPLVLKIPDLLR*DSSWPLLSLDD
Trigger: ATCATCCAGCGACAGCAATGGCCAAGAGGAGTCTCACCGGAGGAGATCCGGAATTTTTAAAACCAGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS CAA 72 bp GAAGGCGTCCTTCTTACAGTGAAAGATGGAGGCCACTaGGTTAGAGATGTACAGGATCTTCCCAGAAACCAG +
Preference number: 6 (lower is better)
Translates to: EGVLLTVKDGGH*VRDVQDLPRNQ
Trigger: CTGGTTTCTGGGAAGATCCTGTACATCTCTAACCAAGTGGCCTCCATCTTTCACTGTAAGAAGGACGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10
CDS TCA 72 bp ACAAACTTGGCATCACTGAAGGCGTCCTTCTTACAGTaGAAGATGGAGGCCACTTGGTTAGAGATGTACAGG +
Preference number: 6 (lower is better)
Translates to: TNLASLKASFLQ*KMEATWLEMYR
Trigger: CCTGTACATCTCTAACCAAGTGGCCTCCATCTTTCACTGTAAGAAGGACGCCTTCAGTGATGCCAAGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069620.10