Pregenerated sensors for PEPD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063931Ensembl transcript IDs: ENSMUST00000075068.14, ENSMUST00000161900.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCATCTTGCTTTTGGGGTaGCATGGGCAGGCTGACATC | + |
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Preference number: 2 (lower is better) Translates to: SALLSPYHLSKIKARDVIILLLG*HGQADI Trigger: GATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGAT...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| 3UTR TCA 72 bp | CTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTaGCATCACAGAGCTTACAAGGCCAGGGCCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LQDLAFGVPWAG*HHRAYKARAQS Trigger: AGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| 3UTR GCA 72 bp | GGATCAAATGTGATCTCCAGGATCTTGCTTTTGGGGTaGCATGGGCAGGCTGACATCACAGAGCTTACAAGG | + |
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Preference number: 3 (lower is better) Translates to: GSNVISRILLLG*HGQADITELTR Trigger: CCTTGTAAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGCTGCAACACGACAGCTaGGGCGGCCTGTACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HGQADITELTRPGPSLTELQHDS*GGLYSS Trigger: GGAGCTGTACAGGCCGCCTCAGCTGTCGTGTTGCAG...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGGACAGAGGGGTTCCGTaGGGTCAGGACACTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: HGQADITELTRPGPSLTEDRGVP*GQDTGN Trigger: ATTGCCAGTGTCCTGACCTCACGGAACCCCTCTGTC...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | ATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGGTGGACCTGGAGCATaGCATCCACACTGCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: MGRLTSQSLQGQGPVSLSGGPGA*HPHCHS Trigger: TGAGTGGCAGTGTGGATGCCATGCTCCAGGTCCACC...ACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | TCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACATCACAGAGCTTAGACACCATAGCAGCCTaGCTCGACGACACCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPGSCFWGAMGRLTSQSLDTIAA*LDDTEG Trigger: GCCTTCGGTGTCGTCGAGTCAGGCTGCTATGGTGTC...TAAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGCTGGGAAGGAGCAGGTaGTGTCAGAAGCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HGQADITELTRPGPSLTELGRSR*CQKQSS Trigger: ACTGCTTTGCTTCTGACATCACCTGCTCCTTCCCAG...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCAGAGAAGGGCACAGATaGCTTGTCGCAGCCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QADITELTRPGPSLTECLREGHR*LVAACH Trigger: ATGGCAGGCTGCGACAAGGCATCTGTGCCCTTCTCT...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | GGTGTGGCGCATGCCGCCCCTAGAGTAACAATAATGCTGGAACAGGACAGGCTTCACGGTGGGCCTCGCTaGAGATCCGATTTGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GVAHAAPRVTIMLEQDRLHGGPR*RSDLCS Trigger: GCTACACAAATCGGATCTCCAGCGAGGCCCACCGTG...AAGCCTGTCCTGTTCCAGCATTATTGTTACTCTAGGGGCGGCATGCGCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161900.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCAATACTGCTCCCAGGTaGACCTGGAGCATGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: QADITELTRPGPSLTECLNTAPR*TWSMAS Trigger: GGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATT...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCCAGTGTCCACATCGATaGCACCATAGCAGCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: QADITELTRPGPSLTECLQCPHR*HHSSLT Trigger: AGTCAGGCTGCTATGGTGTCATCGATGTGGACACTG...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | TCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACATCACAGAGCTTACAGGAGGCCAATGCGTaGCAGTTCCTCCAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SPGSCFWGAMGRLTSQSLQEANA*QFLQVD Trigger: ATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTG...TAAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | ATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTATGTGGCATGAATACTaGTCCCAGGTGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: MGRLTSQSLQGQGPVSLSMWHEY*SQVDLE Trigger: CTCCAGGTCCACCTGGGAGCAGTATTCATGCCACAT...ACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCGTGGCCAAGTCCATGTaGCATGAATACTGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QADITELTRPGPSLTECLVAKSM*HEYCSQ Trigger: CTGGGAGCAGTATTCATGCCACATGGACTTGGCCAC...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | GGATCAAATGTGATCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACACTCCTGGCGGAAGATaGTGGAGGTATCGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSNVISRILLLGCHGQADTPGGR*WRYRCS Trigger: ACTGCACCGATACCTCCATCATCTTCCGCCAGGAGT...GTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | ATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGGGCACAAACAGGGTTaGTTTTCCAGTGTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: MGRLTSQSLQGQGPVSLSGHKQG*FSSVHI Trigger: GATGTGGACACTGGAAAATCAACCCTGTTTGTGCCC...ACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGAGCTATCAGGAAGCCTaGGCACAAACAGGGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: HGQADITELTRPGPSLTESYQEA*AQTGLI Trigger: AATCAACCCTGTTTGTGCCCAGGCTTCCTGATAGCT...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | GGATCAAATGTGATCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACAATGAAGTAGATGCCTaGCTCCACAGTCAGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: GSNVISRILLLGCHGQADNEVDA*LHSQHH Trigger: ATGGTGCTGACTGTGGAGCCAGGCATCTACTTCATT...GTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| 3UTR CAA 72 bp | TTGGTAGGATCAAATGTGATCTCCAGGATCTTGCTTTaGGGGTGCCATGGGCAGGCTGACATCACAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVGSNVISRILL*GCHGQADITEL Trigger: AAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCCTACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR TCA 90 bp | TCTTTTCTCAGAAACAGCAGCAGTGGTTTTGGTAGGATCAAATGTGATCTCCAGCCTTCTGGTCCTCTGTaGACTTGCCGTTGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SFLRNSSSGFGRIKCDLQPSGPL*TCRWLG Trigger: TCCCAGCCAACGGCAAGTTCACAGAGGACCAGAAGG...CTGGAGATCACATTTGATCCTACCAAAACCACTGCTGCTGTTTCTGAGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCTCGGTGCAGTACCGTTaGATCTCTTCCCCGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVISVQYR*ISSPPC Trigger: GCAGGGCGGGGAAGAGATGCAACGGTACTGCACCGA...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCCGGTCAGCCAGCCGATaGATATCAGGCCACCAGACC | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVIRSASR*ISGHQT Trigger: GGTCTGGTGGCCTGATATGCATCGGCTGGCTGACCG...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCTTTTCTCAGAAACAGCAGCAGTGGTTTTGGTAGGATCAAATGTGATCTCCAGGAACTTGCCGTTGGCTaGGAAGGAGCAGGTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SFLRNSSSGFGRIKCDLQELAVG*EGAGDV Trigger: GACATCACCTGCTCCTTCCCAGCCAACGGCAAGTTC...CTGGAGATCACATTTGATCCTACCAAAACCACTGCTGCTGTTTCTGAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCGCCAGTTCCTCCAGGTaGATACGGTCAGCCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVIASSSR*IRSASR Trigger: TCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGC...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCTTAAAGAAGCAGGCTTaGGCCGGGTCTGCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVILKKQA*AGSARA Trigger: GGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAA...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCCACGGTGGGCCTCGCTaGAGATCCGATTTGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVIHGGPR*RSDLCS Trigger: GCTACACAAATCGGATCTCCAGCGAGGCCCACCGTG...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCTTTTCTCAGAAACAGCAGCAGTGGTTTTGGTAGGATCAAATGTGATCTCCAGTCTAGGCCCAGAAAGTaGCCAAGTCCATGTGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SFLRNSSSGFGRIKCDLQSRPRK*PSPCGM Trigger: CATGCCACATGGACTTGGCCACTTTCTGGGCCTAGA...CTGGAGATCACATTTGATCCTACCAAAACCACTGCTGCTGTTTCTGAGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR GCA 90 bp | CTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCTTGCAGATGTCAGCAGCTCCATaGCGCTGTCAGTCACGACAA | + |
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Preference number: 4 (lower is better) Translates to: LLSPYHLSKIKARDVILQMSAAP*RCQSRQ Trigger: TTGTCGTGACTGACAGCGGCATGGAGCTGCTGACAT...CTGCAAGATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CCA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCGTGAGGTCAGGACACTaGCAATCTCATCCGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: SALLSPYHLSKIKARDVIVRSGH*QSHPCT Trigger: AGTACACGGATGAGATTGCCAGTGTCCTGACCTCAC...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | GATGCCTGGCTCCACAGTCAGCACCATGCCCGGCTCCAGGTGCCTTaGCGTACGCAGGCTTCGCAGGCCAGGTTCATCGATGCGCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: DAWLHSQHHARLQVP*RTQASQARFIDALY Trigger: GTAGAGCGCATCGATGAACCTGGCCTGCGAAGCCTGCGTACGGCAAGGCACCTGGAGCCGGGCATGGTGCTGACTGTGGAGCCAGGCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | TCGATCCGCACCCCACCGAAGTTGCGGAAGCGCTGCAGGACCTCTTaGTTAAAGAAGCAGGCTTGGGCCGGGTCTGCCAGGGCCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SIRTPPKLRKRCRTS*LKKQAWAGSARAWS Trigger: GGACCAGGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTTCGGTGGGGTGCGGATCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS TCA 90 bp | AGGCTTGGGCCGGGTCTGCCAGGGCCTGGTCCAAGAGGTGGTCAATaGAGTAGATGCCTGGCTCCACAGTCAGCACCATGCCCGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLGPGLPGPGPRGGQ*SRCLAPQSAPCPAP Trigger: TGGAGCCGGGCATGGTGCTGACTGTGGAGCCAGGCATCTACTTCATTGACCACCTCTTGGACCAGGCCCTGGCAGACCCGGCCCAAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | GGTGGACCTGGAGCATGGCATCCACACTGCCACTCAGGAGGCCAATaGGTGCCAGTTCCTCCAGGTGGATACGGTCAGCCAGCCGATGCA | + |
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Preference number: 5 (lower is better) Translates to: GGPGAWHPHCHSGGQ*VPVPPGGYGQPADA Trigger: TGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGGCAGTGTGGATGCCATGCTCCAGGTCCACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | CCAGGTGCCTTGCCGTACGCAGGCTTCGCAGGCCAGGTTCATCGATaGGCTCTACACCCTCAGGGTAGCCTCCCACGTCGTGCACATCTA | + |
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Preference number: 5 (lower is better) Translates to: PGALPYAGFAGQVHR*ALHPQGSLPRRAHL Trigger: TAGATGTGCACGACGTGGGAGGCTACCCTGAGGGTGTAGAGCGCATCGATGAACCTGGCCTGCGAAGCCTGCGTACGGCAAGGCACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | TCCACACTGCCACTCAGGAGGCCAATGCGTGCCAGTTCCTCCAGGTaGATACGGTCAGCCAGCCGATGCATATCAGGCCACCAGACCCCT | + |
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Preference number: 5 (lower is better) Translates to: STLPLRRPMRASSSR*IRSASRCISGHQTP Trigger: AGGGGTCTGGTGGCCTGATATGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGGCAGTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | GGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACATCACAGAGCTTACAAGGCCGCACCCCACCGAAGTaGCGGAAGCGCTGCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: GSCFWGAMGRLTSQSLQGRTPPK*RKRCRT Trigger: GGTCCTGCAGCGCTTCCGCAACTTCGGTGGGGTGCG...GCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | GACCTGGAGCATGGCATCCACACTGCCACTCAGGAGGCCAATGCGTaGCAGTTCCTCCAGGTGGATACGGTCAGCCAGCCGATGCATATC | + |
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Preference number: 5 (lower is better) Translates to: DLEHGIHTATQEANA*QFLQVDTVSQPMHI Trigger: GATATGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGGCAGTGTGGATGCCATGCTCCAGGTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | GCGCTGCAGGACCTCTTGGTTAAAGAAGCAGGCTTGGGCCGGGTCTaGCAGGGCCTGGTCCAAGAGGTGGTCAATGAAGTAGATGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ALQDLLVKEAGLGRV*QGLVQEVVNEVDAW Trigger: CCAGGCATCTACTTCATTGACCACCTCTTGGACCAGGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGATCGGTGCAGTACCGTaGCATCTCTTCCCCGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: HGQADITELTRPGPSLTEIGAVP*HLFPAL Trigger: CAGGGCGGGGAAGAGATGCAACGGTACTGCACCGAT...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | AAGTGGCCAAGTCCATGTGGCATGAATACTGCTCCCAGGTGGACCTaGAGCATGGCATCCACACTGCCACTCAGGAGGCCAATGCGTGCC | + |
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Preference number: 5 (lower is better) Translates to: KWPSPCGMNTAPRWT*SMASTLPLRRPMRA Trigger: GGCACGCATTGGCCTCCTGAGTGGCAGTGTGGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | AAGTTGCGGAAGCGCTGCAGGACCTCTTGGTTAAAGAAGCAGGCTTaGGCCGGGTCTGCCAGGGCCTGGTCCAAGAGGTGGTCAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: KLRKRCRTSWLKKQA*AGSARAWSKRWSMK Trigger: CTTCATTGACCACCTCTTGGACCAGGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCAAGGGCACAGATGCCTaGTCGCAGCCTGCCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: QADITELTRPGPSLTECLKGTDA*SQPAMH Trigger: GTGCATGGCAGGCTGCGACAAGGCATCTGTGCCCTT...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS TCA 90 bp | CGTCGTGCACATCTAGGCCCAGAAAGTGGCCAAGTCCATGTGGCATaGATACTGCTCCCAGGTGGACCTGGAGCATGGCATCCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: RRAHLGPESGQVHVA*ILLPGGPGAWHPHC Trigger: GCAGTGTGGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCACTTTCTGGGCCTAGATGTGCACGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | CCAATGCGTGCCAGTTCCTCCAGGTGGATACGGTCAGCCAGCCGATaGATATCAGGCCACCAGACCCCTGGCTTCATAGTGCTCATGACA | + |
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Preference number: 5 (lower is better) Translates to: PMRASSSRWIRSASR*ISGHQTPGFIVLMT Trigger: TGTCATGAGCACTATGAAGCCAGGGGTCTGGTGGCCTGATATGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | CTTCGATTTCCTCCACAGTCCGGGGTACACATGTCAGCAGCTCCATaGCGCTGTCAGTCACGACAACATCTTCCTCGATCCGCACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LRFPPQSGVHMSAAP*RCQSRQHLPRSAPH Trigger: GTGGGGTGCGGATCGAGGAAGATGTTGTCGTGACTGACAGCGGCATGGAGCTGCTGACATGTGTACCCCGGACTGTGGAGGAAATCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | GTGGATACGGTCAGCCAGCCGATGCATATCAGGCCACCAGACCCCTaGCTTCATAGTGCTCATGACAGTTCTGCAGCTCCTGAGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: VDTVSQPMHIRPPDP*LHSAHDSSAAPEHC Trigger: GCAGTGCTCAGGAGCTGCAGAACTGTCATGAGCACTATGAAGCCAGGGGTCTGGTGGCCTGATATGCATCGGCTGGCTGACCGTATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 90 bp | CCCAGAAAGTGGCCAAGTCCATGTGGCATGAATACTGCTCCCAGGTaGACCTGGAGCATGGCATCCACACTGCCACTCAGGAGGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: PRKWPSPCGMNTAPR*TWSMASTLPLRRPM Trigger: CATTGGCCTCCTGAGTGGCAGTGTGGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCACTTTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | ATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTCTGCCACTGTCTGTGTaGACACCGCGCAAAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: MGRLTSQSLQGQGPVSLSLPLSV*TPRKVR Trigger: CCTCACTTTGCGCGGTGTCAACACAGACAGTGGCAG...ACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | CAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGTGTCTCTGGTCCTCTGTGAACTaGCCGTTGGCTGGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QADITELTRPGPSLTECLWSSVN*PLAGKE Trigger: CTCCTTCCCAGCCAACGGCAAGTTCACAGAGGACCA...GAGACACTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | CATGGGCAGGCTGACATCACAGAGCTTACAAGGCCAGGGCCCAGTCTCACTGAGGCGCTGCAGGACCTCTaGGTTAAAGAAGCAGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: HGQADITELTRPGPSLTEALQDL*VKEAGL Trigger: CAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGC...CTCAGTGAGACTGGGCCCTGGCCTTGTAAGCTCTGTGATGTCAGCCTGCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | ACTTTTGGCCAGAGAAGGGCACAGATGCCTTGTCGCAGCCTGCCATaGACGCTTCGATTTCCTCCACAGTCCGGGGTACACATGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TFGQRRAQMPCRSLP*TLRFPPQSGVHMSA Trigger: TGCTGACATGTGTACCCCGGACTGTGGAGGAAATCGAAGCGTGCATGGCAGGCTGCGACAAGGCATCTGTGCCCTTCTCTGGCCAAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 90 bp | CCCTGGCTTCATAGTGCTCATGACAGTTCTGCAGCTCCTGAGCACTaGTTCGTAGATGGCCTTCTGGTCCTCTGTGAACTTGCCGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PWLHSAHDSSAAPEH*FVDGLLVLCELAVG Trigger: GCCAACGGCAAGTTCACAGAGGACCAGAAGGCCATCTACGAAGCAGTGCTCAGGAGCTGCAGAACTGTCATGAGCACTATGAAGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | GGATCAAATGTGATCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACTCTGTGAACTTGCCGTaGGCTGGGAAGGAGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSNVISRILLLGCHGQADSVNLP*AGKEQV Trigger: CACCTGCTCCTTCCCAGCCAACGGCAAGTTCACAGA...GTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS TCA 90 bp | AGTAGTACTCGCCACCCATGTCGAACAGGCAAATATCTCCATCCTTaGTCGTCCGGTCATTGGGGGCTCCAGCATGGCCATAGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSTRHPCRTGKYLHP*SSGHWGLQHGHSAA Trigger: TGCTGCACTATGGCCATGCTGGAGCCCCCAATGACCGGACGATCAAGGATGGAGATATTTGCCTGTTCGACATGGGTGGCGAGTACTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | CGCGTTCTCACCGCTACAGCAGATACAGGTGTAAGAGGTGTGGCGCATGCCGCCATCGTGTTGTTGACATaGAACTTGCTAATGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RVLTATADTGVRGVAHAAIVLLT*NLLMPS Trigger: CGAGGGCATTAGCAAGTTCAATGTCAACAACACGAT...GGCGGCATGCGCCACACCTCTTACACCTGTATCTGCTGTAGCGGTGAGAACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161900.8 |
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| CDS-3UTR CAA 90 bp | GGATCAAATGTGATCTCCAGGATCTTGCTTTTGGGGTGCCATGGGCAGGCTGACATCGTGTTGTTGACATaGAACTTGCTAATGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GSNVISRILLLGCHGQADIVLLT*NLLMPS Trigger: CGAGGGCATTAGCAAGTTCAATGTCAACAACACGAT...GTCAGCCTGCCCATGGCACCCCAAAAGCAAGATCCTGGAGATCACATTTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | ACAGGTGTAAGAGGTGTGGCGCATGCCGCCCCTAGAGTAACAATAATGCTGGAATTGTTGACATTGAACTaGCTAATGCCCTCGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TGVRGVAHAAPRVTIMLELLTLN*LMPSKE Trigger: CTCCTTCGAGGGCATTAGCAAGTTCAATGTCAACAA...TTCCAGCATTATTGTTACTCTAGGGGCGGCATGCGCCACACCTCTTACACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161900.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTCTCAGAAACAGCAGCAGTGGTTTTGGTAGGATCAAATGTGATCTCCAGTCCTTGAAATACTCCTaGGAATGGATCTTTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: SFLRNSSSGFGRIKCDLQSLKYS*EWIFPI Trigger: GATGGGAAAGATCCATTCCAAGGAGTATTTCAAGGA...CTGGAGATCACATTTGATCCTACCAAAACCACTGCTGCTGTTTCTGAGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS-3UTR CAA 90 bp | TCAGCACTCTTAAGTCCCTATCATTTAAGCAAAATCAAAGCTAGGGATGTGATCTTGTTGACATTGAACTaGCTAATGCCCTCGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SALLSPYHLSKIKARDVILLTLN*LMPSKE Trigger: CTCCTTCGAGGGCATTAGCAAGTTCAATGTCAACAA...GATCACATCCCTAGCTTTGATTTTGCTTAAATGATAGGGACTTAAGAGTGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 90 bp | CTCGATCCGCACCCCACCGAAGTTGCGGAAGCGCTGCAGGACCTCTaGGTTAAAGAAGCAGGCTTGGGCCGGGTCTGCCAGGGCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LDPHPTEVAEALQDL*VKEAGLGRVCQGLV Trigger: GACCAGGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTTCGGTGGGGTGCGGATCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | CTCCACAGTCAGCACCATGCCCGGCTCCAGGTGCCTTaGCGTACGCAGGCTTCGCAGGCCAGGTTCATCGAT | + |
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Preference number: 6 (lower is better) Translates to: LHSQHHARLQVP*RTQASQARFID Trigger: ATCGATGAACCTGGCCTGCGAAGCCTGCGTACGGCAAGGCACCTGGAGCCGGGCATGGTGCTGACTGTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 90 bp | AGATGCCTGGCTCCACAGTCAGCACCATGCCCGGCTCCAGGTGCCTaGCCGTACGCAGGCTTCGCAGGCCAGGTTCATCGATGCGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: RCLAPQSAPCPAPGA*PYAGFAGQVHRCAL Trigger: TAGAGCGCATCGATGAACCTGGCCTGCGAAGCCTGCGTACGGCAAGGCACCTGGAGCCGGGCATGGTGCTGACTGTGGAGCCAGGCATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | CATGGCATCCACACTGCCACTCAGGAGGCCAATGCGTaGCAGTTCCTCCAGGTGGATACGGTCAGCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: HGIHTATQEANA*QFLQVDTVSQP Trigger: CGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGGCAGTGTGGATGCCATG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | TTGCCGTACGCAGGCTTCGCAGGCCAGGTTCATCGATaGGCTCTACACCCTCAGGGTAGCCTCCCACGTCGT | + |
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Preference number: 6 (lower is better) Translates to: LPYAGFAGQVHR*ALHPQGSLPRR Trigger: ACGACGTGGGAGGCTACCCTGAGGGTGTAGAGCGCATCGATGAACCTGGCCTGCGAAGCCTGCGTACGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 72 bp | CACCCCACCGAAGTTGCGGAAGCGCTGCAGGACCTCTaGGTTAAAGAAGCAGGCTTGGGCCGGGTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HPTEVAEALQDL*VKEAGLGRVCQ Trigger: CTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTTCGGTGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS TCA 72 bp | CCGGGTCTGCCAGGGCCTGGTCCAAGAGGTGGTCAATaGAGTAGATGCCTGGCTCCACAGTCAGCACCATGC | + |
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Preference number: 6 (lower is better) Translates to: PGLPGPGPRGGQ*SRCLAPQSAPC Trigger: GCATGGTGCTGACTGTGGAGCCAGGCATCTACTTCATTGACCACCTCTTGGACCAGGCCCTGGCAGACCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | GGAGCATGGCATCCACACTGCCACTCAGGAGGCCAATaGGTGCCAGTTCCTCCAGGTGGATACGGTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GAWHPHCHSGGQ*VPVPPGGYGQP Trigger: TGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGGCAGTGTGGATGCCATGCTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | TTGGCCAGAGAAGGGCACAGATGCCTTGTCGCAGCCTaGCATGCACGCTTCGATTTCCTCCACAGTCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LAREGHRCLVAA*HARFDFLHSPG Trigger: CCCCGGACTGTGGAGGAAATCGAAGCGTGCATGGCAGGCTGCGACAAGGCATCTGTGCCCTTCTCTGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 72 bp | CCACTCAGGAGGCCAATGCGTGCCAGTTCCTCCAGGTaGATACGGTCAGCCAGCCGATGCATATCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PLRRPMRASSSR*IRSASRCISGH Trigger: GTGGCCTGATATGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGCACGCATTGGCCTCCTGAGTGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | GCCAGTTCCTCCAGGTGGATACGGTCAGCCAGCCGATaGATATCAGGCCACCAGACCCCTGGCTTCATAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASSSRWIRSASR*ISGHQTPGFIV Trigger: CACTATGAAGCCAGGGGTCTGGTGGCCTGATATGCATCGGCTGGCTGACCGTATCCACCTGGAGGAACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 90 bp | GAAGTTGCGGAAGCGCTGCAGGACCTCTTGGTTAAAGAAGCAGGCTaGGGCCGGGTCTGCCAGGGCCTGGTCCAAGAGGTGGTCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: EVAEALQDLLVKEAG*GRVCQGLVQEVVNE Trigger: TTCATTGACCACCTCTTGGACCAGGCCCTGGCAGACCCGGCCCAAGCCTGCTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | TGGCGGAAGATGATGGAGGTATCGGTGCAGTACCGTTaGATCTCTTCCCCGCCCTGCAACACGACAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WRKMMEVSVQYR*ISSPPCNTTAE Trigger: CTCAGCTGTCGTGTTGCAGGGCGGGGAAGAGATGCAACGGTACTGCACCGATACCTCCATCATCTTCCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | CCTCCACAGTCCGGGGTACACATGTCAGCAGCTCCATaGCGCTGTCAGTCACGACAACATCTTCCTCGATCC | + |
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Preference number: 6 (lower is better) Translates to: PPQSGVHMSAAP*RCQSRQHLPRS Trigger: GGATCGAGGAAGATGTTGTCGTGACTGACAGCGGCATGGAGCTGCTGACATGTGTACCCCGGACTGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 72 bp | TGGCCAAGTCCATGTGGCATGAATACTGCTCCCAGGTaGACCTGGAGCATGGCATCCACACTGCCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: WPSPCGMNTAPR*TWSMASTLPLR Trigger: CCTGAGTGGCAGTGTGGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | GCCCAGAAAGTGGCCAAGTCCATGTGGCATGAATACTaGTCCCAGGTGGACCTGGAGCATGGCATCCACACT | + |
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Preference number: 6 (lower is better) Translates to: AQKVAKSMWHEY*SQVDLEHGIHT Trigger: AGTGTGGATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCACTTTCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CCA 72 bp | GTCAGCCAGCCGATGCATATCAGGCCACCAGACCCCTaGCTTCATAGTGCTCATGACAGTTCTGCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSQPMHIRPPDP*LHSAHDSSAAP Trigger: AGGAGCTGCAGAACTGTCATGAGCACTATGAAGCCAGGGGTCTGGTGGCCTGATATGCATCGGCTGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS TCA 72 bp | CATCTAGGCCCAGAAAGTGGCCAAGTCCATGTGGCATaGATACTGCTCCCAGGTGGACCTGGAGCATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLGPESGQVHVA*ILLPGGPGAWH Trigger: ATGCCATGCTCCAGGTCCACCTGGGAGCAGTATTCATGCCACATGGACTTGGCCACTTTCTGGGCCTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 72 bp | ACGACAACATCTTCCTCGATCCGCACCCCACCGAAGTaGCGGAAGCGCTGCAGGACCTCTTGGTTAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TTTSSSIRTPPK*RKRCRTSWLKK Trigger: CTTCTTTAACCAAGAGGTCCTGCAGCGCTTCCGCAACTTCGGTGGGGTGCGGATCGAGGAAGATGTTGTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS GCA 72 bp | CATAGTGCTCATGACAGTTCTGCAGCTCCTGAGCACTaGTTCGTAGATGGCCTTCTGGTCCTCTGTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: HSAHDSSAAPEH*FVDGLLVLCEL Trigger: AAGTTCACAGAGGACCAGAAGGCCATCTACGAAGCAGTGCTCAGGAGCTGCAGAACTGTCATGAGCACTATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075068.14 |
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| CDS CAA 72 bp | TCATTACCTCACGGTGGGCCTCGCTGGAGATCCGATTaGTGTAGCGCAAAACCTCTAGTTCCATGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLPHGGPRWRSD*CSAKPLVPCLS Trigger: AGACAGACATGGAACTAGAGGTTTTGCGCTACACAAATCGGATCTCCAGCGAGGCCCACCGTGAGGTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075068.14 ENSMUST00000161900.8 |
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| CDS CCA 72 bp | CTTTTACAGCCTTCATTACCTCACGGTGGGCCTCGCTaGAGATCCGATTTGTGTAGCGCAAAACCTCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LLQPSLPHGGPR*RSDLCSAKPLV Trigger: AACTAGAGGTTTTGCGCTACACAAATCGGATCTCCAGCGAGGCCCACCGTGAGGTAATGAAGGCTGTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075068.14 ENSMUST00000161900.8 |
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| CDS CCA 72 bp | CATGTCTGTCTTGAACACTCGGCATTCCACGATCTCTaGGTGAAGAATCGTGTTGTTGACATTGAACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HVCLEHSAFHDL*VKNRVVDIELA Trigger: AGCAAGTTCAATGTCAACAACACGATTCTTCACCCAGAGATCGTGGAATGCCGAGTGTTCAAGACAGACATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075068.14 ENSMUST00000161900.8 |
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