RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PELP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018921

Ensembl transcript IDs: ENSMUST00000019065.10, ENSMUST00000135148.2

Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ATGGCTGTGGGTCCTCCCCCTCCAGGAGTCCCTTCAGGGACCAGCTaGGGTGGAGGAAGTGTCACAGGACCAGAGGCCGGTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: MAVGPPPPGVPSGTS*GGGSVTGPEAGGGG
Trigger: CCCACCCCCACCGGCCTCTGGTCCTGTGACACTTCCTCCACCCCAGCTGGTCCCTGAAGGGACTCCTGGAGGGGGAGGACCCACAGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 90 bp GAGCCCAGGTTCAGGTTCTGCCTCAGGCTGTACTTTGGGCGAGTCTaGAGGTGGCAGAGCAGGTGGCAGTGTTGGGGGTGGAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: EPRFRFCLRLYFGRV*RWQSRWQCWGWRST
Trigger: GGTGGACCTCCACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAACCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CATGTCGGAGCAGATCCCTCAGGACAGCCACAGCCAGCTCCATGGTaGACGGTGAGTCCTGAGACTGCAGCACCTGCTGGATGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: HVGADPSGQPQPAPW*TVSPETAAPAGCSE
Trigger: TTCGGAGCATCCAGCAGGTGCTGCAGTCTCAGGACTCACCGTCCACCATGGAGCTGGCTGTGGCTGTCCTGAGGGATCTGCTCCGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp ATGCATGTCGGAGCAGATCCCTCAGGACAGCCACAGCCAGCTCCATaGTGGACGGTGAGTCCTGAGACTGCAGCACCTGCTGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: MHVGADPSGQPQPAP*WTVSPETAAPAGCS
Trigger: GGAGCATCCAGCAGGTGCTGCAGTCTCAGGACTCACCGTCCACCATGGAGCTGGCTGTGGCTGTCCTGAGGGATCTGCTCCGACATGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CCTAAATGGTTGGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACTTaGCCTGTGGACGCCATAGAGCCTACTGTGGGAATGGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PKWLAVAGGPGREGT*PVDAIEPTVGMGPA
Trigger: AGCAGGCCCCATTCCCACAGTAGGCTCTATGGCGTCCACAGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp TGGGTGGAACAGATACCAGGCCTGGGACAGAGAGGCCTAAATGGTTaGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACTTGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: WVEQIPGLGQRGLNG*LLLEVQGERALGLW
Trigger: CCACAGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTGTTCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp AGCCTGGGTGGAACAGATACCAGGCCTGGGACAGAGAGGCCTAAATaGTTGGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SLGGTDTRPGTERPK*LAVAGGPGREGTWP
Trigger: AGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTGTTCCACCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 90 bp CCCAAACTCAGAGCTGAGCATGAGCCCCAGGCAACGGGCCAGGCCTaGAAACCTCTGCCGAAGCTGGAGGAGGACATGGGTGTTACCATC +
Preference number: 5 (lower is better)
Translates to: PKLRAEHEPQATGQA*KPLPKLEEDMGVTI
Trigger: GATGGTAACACCCATGTCCTCCTCCAGCTTCGGCAGAGGTTTTCAGGCCTGGCCCGTTGCCTGGGGCTCATGCTCAGCTCTGAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp CCACACGCAAGGATCAGGGCAGAGAGCAAGTCCAAGGCCTCAAGGTaGAGAGAAGGCAGCAGCAGCAACCTGAGGGGACCATCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PHARIRAESKSKASR*REGSSSNLRGPSPS
Trigger: GCTTGGAGATGGTCCCCTCAGGTTGCTGCTGCTGCCTTCTCTGCACCTTGAGGCCTTGGACTTGCTCTCTGCCCTGATCCTTGCGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CCAGGAAGGTGGTTGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTaGGATGCATGTCGGAGCAGATCCCTCAGGACAGCCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGRWLVEMSRNRVGS*DACRSRSLRTATAS
Trigger: GCTGGCTGTGGCTGTCCTGAGGGATCTGCTCCGACATGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCACCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 90 bp TCACTGAGCAGGTGGGTGAGCAAGGCTTCTCCAGAGGCTCCTCCCTaGAGCATACCTGCTGAGGCCCCACAAACCTGCACCCATAGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSRWVSKASPEAPP*SIPAEAPQTCTHSS
Trigger: AGAGCTATGGGTGCAGGTTTGTGGGGCCTCAGCAGGTATGCTTCAGGGAGGAGCCTCTGGAGAAGCCTTGCTCACCCACCTGCTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp TGTGCTTCAGTCCCTGGGAAAAGCCAGCACCTAACGAGGGCAACCTaGAGTAACACTCGCAGGCCAGCTGTTGGAGCTGAGGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: CASVPGKSQHLTRAT*SNTRRPAVGAEGSG
Trigger: CCCTGAACCCTCAGCTCCAACAGCTGGCCTGCGAGTGTTACTCCAGGTTGCCCTCGTTAGGTGCTGGCTTTTCCCAGGGACTGAAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp AAGGTGGTTGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTGGGATaGATGTCGGAGCAGATCCCTCAGGACAGCCACAGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: KVVGGDVPKQGRKLG*MSEQIPQDSHSQLH
Trigger: ATGGAGCTGGCTGTGGCTGTCCTGAGGGATCTGCTCCGACATGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp AGTGAGGTCAGCAGGCTGTGCAGCTCCTGTTCCCAGTTCTCTGTGTaGTTCAGTCCCTGGGAAAAGCCAGCACCTAACGAGGGCAACCTG +
Preference number: 5 (lower is better)
Translates to: SEVSRLCSSCSQFSV*FSPWEKPAPNEGNL
Trigger: CAGGTTGCCCTCGTTAGGTGCTGGCTTTTCCCAGGGACTGAAGCACACAGAGAACTGGGAACAGGAGCTGCACAGCCTGCTGACCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CCTGGAGCTAGAGTATCCCTCCCAGTGCTCCAGGCATTGAGAACCTaGGGAAGCAGCCGGCTGATCAGGGCACCAAAACGCAAAAGTCGA +
Preference number: 5 (lower is better)
Translates to: PGARVSLPVLQALRT*GSSRLIRAPKRKSR
Trigger: TCGACTTTTGCGTTTTGGTGCCCTGATCAGCCGGCTGCTTCCCCAGGTTCTCAATGCCTGGAGCACTGGGAGGGATACTCTAGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CTTCCAATAAGAGCCCAGGTTCAGGTTCTGCCTCAGGCTGTACTTTaGGCGAGTCTGAAGGTGGCAGAGCAGGTGGCAGTGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LPIRAQVQVLPQAVL*ASLKVAEQVAVLGV
Trigger: CACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAACCTGGGCTCTTATTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CACTCTGGTCTGAGGCCCAGCAAGGAAGTAAGAAGCCCAGGAAGGTaGTTGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTGGGATGCA +
Preference number: 5 (lower is better)
Translates to: HSGLRPSKEVRSPGR*LVEMSRNRVGSWDA
Trigger: TGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCACCTTCCTGGGCTTCTTACTTCCTTGCTGGGCCTCAGACCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp GCAGCTGCGCACACGTCACTGTTGGCATTCCTATCTCCTTTCCTTTaGCTGGGTGGAGCCAAAGCTTCCCCCATATCGAGCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: AAAHTSLLAFLSPFL*LGGAKASPISSLSF
Trigger: GAAGCTCAAGCTCGATATGGGGGAAGCTTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGTGACGTGTGCGCAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp TTGCTACTGATACCAAGGATCCGGCAGATGAGGTCCAGGATTTCCTaGACAGGAACGGACACAGGAGCCCCAAACTCAGAGCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: LLLIPRIRQMRSRIS*TGTDTGAPNSELSM
Trigger: CATGCTCAGCTCTGAGTTTGGGGCTCCTGTGTCCGTTCCTGTGCAGGAAATCCTGGACCTCATCTGCCGGATCCTTGGTATCAGTAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp GGCAGCTGTATCATCTTGCTCCTTTTCCTGAGGAGCTGGAACTTCTaGTTCTGTCTCCATTTCTTCTGCAGGTGTCTCCGGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GSCIILLLFLRSWNF*FCLHFFCRCLRWGW
Trigger: CCACCCCCACCGGAGACACCTGCAGAAGAAATGGAGACAGAAGCAGAAGTTCCAGCTCCTCAGGAAAAGGAGCAAGATGATACAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 90 bp CAACGGGCCAGGCCTGAAAACCTCTGCCGAAGCTGGAGGAGGACATaGGTGTTACCATCTTCTGAGTGGGAAAGCAGCATCTCTATTCCA +
Preference number: 5 (lower is better)
Translates to: QRARPENLCRSWRRT*VLPSSEWESSISIP
Trigger: TGGAATAGAGATGCTGCTTTCCCACTCAGAAGATGGTAACACCCATGTCCTCCTCCAGCTTCGGCAGAGGTTTTCAGGCCTGGCCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 90 bp AAACCTCTGCCGAAGCTGGAGGAGGACATGGGTGTTACCATCTTCTaGGTGGGAAAGCAGCATCTCTATTCCAGGGCCTTCACTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KPLPKLEEDMGVTIF*VGKQHLYSRAFTLH
Trigger: GTGCAGAGTGAAGGCCCTGGAATAGAGATGCTGCTTTCCCACTCAGAAGATGGTAACACCCATGTCCTCCTCCAGCTTCGGCAGAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 90 bp AGGTACTCGGGGGTGTGTCAGAGCAGCACAGGTCACCAGAGCTTCTaGGCAAAAAGAGGAGACCTCAAGACTATCTTCCCATTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RYSGVCQSSTGHQSF*AKRGDLKTIFPLAK
Trigger: CTTGGCCAATGGGAAGATAGTCTTGAGGTCTCCTCTTTTTGCTCAGAAGCTCTGGTGACCTGTGCTGCTCTGACACACCCCCGAGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp GACTGCAGCACCTGCTGGATGCTCCGAAGCCAAGAAACACAATGTTaGTGGAATAACTCTGTGGGGCTCTCCCCTATCAACAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: DCSTCWMLRSQETQC*WNNSVGLSPINKDS
Trigger: GCTGTCCTTGTTGATAGGGGAGAGCCCCACAGAGTTATTCCAGCAACATTGTGTTTCTTGGCTTCGGAGCATCCAGCAGGTGCTGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp ACCTGCAGCACCTGCTGGATGCTCCGAAGCCAAGAAACACAATGTTaGTGGAATAACTCTGTGGGGCTCTCCCCTATCAACAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: TCSTCWMLRSQETQC*WNNSVGLSPINKDS
Trigger: GCTGTCCTTGTTGATAGGGGAGAGCCCCACAGAGTTATTCCAGCAACATTGTGTTTCTTGGCTTCGGAGCATCCAGCAGGTGCTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135148.2
CDS CCA 90 bp GGATGCTCCGAAGCCAAGAAACACAATGTTGCTGGAATAACTCTGTaGGGCTCTCCCCTATCAACAAGGACAGCAGACACAGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: GCSEAKKHNVAGITL*GSPLSTRTADTGLQ
Trigger: TTGAAGGCCTGTGTCTGCTGTCCTTGTTGATAGGGGAGAGCCCCACAGAGTTATTCCAGCAACATTGTGTTTCTTGGCTTCGGAGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS GCA 90 bp CACACTGTCATCAGAGTCGCTTTCCAAGGAGATCTCTACATCAGATaGCTCCTCCTTATCGTAGTGGACAAAGGCTGGCCTAGGTACTCT +
Preference number: 5 (lower is better)
Translates to: HTVIRVAFQGDLYIR*LLLIVVDKGWPRYS
Trigger: AGAGTACCTAGGCCAGCCTTTGTCCACTACGATAAGGAGGAGGCATCTGATGTAGAGATCTCCTTGGAAAGCGACTCTGATGACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 90 bp CAGGACTTTCTGGAAAATTCAGAAGAACCTGCAGCACCTGCTGGATaGTCCGAAGCCAAGAAACACAATGTTGCTGGAATAACTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QDFLENSEEPAAPAG*SEAKKHNVAGITLW
Trigger: CCACAGAGTTATTCCAGCAACATTGTGTTTCTTGGCTTCGGAGCATCCAGCAGGTGCTGCAGGTTCTTCTGAATTTTCCAGAAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135148.2
CDS GCA 90 bp GGGGTTTCAGGACTTTCTGGAAAATTCAGAAGAACCTGCAGCACCTaGTGGATGCTCCGAAGCCAAGAAACACAATGTTGCTGGAATAAC +
Preference number: 5 (lower is better)
Translates to: GVSGLSGKFRRTCST*WMLRSQETQCCWNN
Trigger: GTTATTCCAGCAACATTGTGTTTCTTGGCTTCGGAGCATCCAGCAGGTGCTGCAGGTTCTTCTGAATTTTCCAGAAAGTCCTGAAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135148.2
CDS GCA 72 bp CGGGGGACGCCGTTCGCGGCTGTAACAACCCGGAAATaGTCTCTAACAGCAGCAGACGCAGACGCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: RGTPFAAVTTRK*SLTAADADAGR
Trigger: CCGGCCCGCGTCTGCGTCTGCTGCTGTTAGAGAGCATTTCCGGGTTGTTACAGCCGCGAACGGCGTCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS TCA 72 bp CCCCACCTGCCGTCCCATGCAGCCTCAATAAGCACATaGGCCCGGGCAAATGCGGGGCCCACTGGATTGGGG +
Preference number: 6 (lower is better)
Translates to: PHLPSHAASIST*ARANAGPTGLG
Trigger: CCCCAATCCAGTGGGCCCCGCATTTGCCCGGGCTCATGTGCTTATTGAGGCTGCATGGGACGGCAGGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS TCA 72 bp CCTCAGGACAGCCACAGCCAGCTCCATGGTGGACGGTaGGTCCTGAGACTGCAGCACCTGCTGGATGCTCCG +
Preference number: 6 (lower is better)
Translates to: PQDSHSQLHGGR*VLRLQHLLDAP
Trigger: CGGAGCATCCAGCAGGTGCTGCAGTCTCAGGACTCACCGTCCACCATGGAGCTGGCTGTGGCTGTCCTGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp AGGGGGAGCAGAGGACTCTTCAACAAGCTCCTGAGGTaGCCCTGCTGCAGGGCTTCCCACTTCCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: RGSRGLFNKLLR*PCCRASHFLLP
Trigger: GGGGAGCAGGAAGTGGGAAGCCCTGCAGCAGGGCCACCTCAGGAGCTTGTTGAAGAGTCCTCTGCTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp TGGGCGAGTCTGAAGGTGGCAGAGCAGGTGGCAGTGTaGGGGGTGGAGGTCCACCTTCTTCCACCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: WASLKVAEQVAV*GVEVHLLPPPL
Trigger: CAGGGGAGGTGGAAGAAGGTGGACCTCCACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp GGAGCAGATCCCTCAGGACAGCCACAGCCAGCTCCATaGTGGACGGTGAGTCCTGAGACTGCAGCACCTGCT +
Preference number: 6 (lower is better)
Translates to: GADPSGQPQPAP*WTVSPETAAPA
Trigger: AGCAGGTGCTGCAGTCTCAGGACTCACCGTCCACCATGGAGCTGGCTGTGGCTGTCCTGAGGGATCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 90 bp GAACAGATACCAGGCCTGGGACAGAGAGGCCTAAATGGTTGGCTGTaGCTGGAGGTCCAGGGCGAGAGGGCACTTGGCCTGTGGACGCCA +
Preference number: 6 (lower is better)
Translates to: EQIPGLGQRGLNGWL*LEVQGERALGLWTP
Trigger: TGGCGTCCACAGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp GGAACAGATACCAGGCCTGGGACAGAGAGGCCTAAATaGTTGGCTGTTGCTGGAGGTCCAGGGCGAGAGGGC +
Preference number: 6 (lower is better)
Translates to: GTDTRPGTERPK*LAVAGGPGREG
Trigger: GCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp CCTGGAGCTAGAGTATCCCTCCCAGTGCTCCAGGCATaGAGAACCTGGGGAAGCAGCCGGCTGATCAGGGCA +
Preference number: 6 (lower is better)
Translates to: PGARVSLPVLQA*RTWGSSRLIRA
Trigger: TGCCCTGATCAGCCGGCTGCTTCCCCAGGTTCTCAATGCCTGGAGCACTGGGAGGGATACTCTAGCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp GTTGGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACTaGGCCTGTGGACGCCATAGAGCCTACTGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: VGCCWRSRARGH*ACGRHRAYCGN
Trigger: ATTCCCACAGTAGGCTCTATGGCGTCCACAGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 72 bp TTCAGGTTCTGCCTCAGGCTGTACTTTGGGCGAGTCTaGAGGTGGCAGAGCAGGTGGCAGTGTTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: FRFCLRLYFGRV*RWQSRWQCWGW
Trigger: CCACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp GGTGGAGATGTCCCGAAACAGGGTAGGAAGCTGGGATaGATGTCGGAGCAGATCCCTCAGGACAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: GGDVPKQGRKLG*MSEQIPQDSHS
Trigger: GCTGTGGCTGTCCTGAGGGATCTGCTCCGACATGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp GTCCCTGGGAAAAGCCAGCACCTAACGAGGGCAACCTaGAGTAACACTCGCAGGCCAGCTGTTGGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: VPGKSQHLTRAT*SNTRRPAVGAE
Trigger: CTCAGCTCCAACAGCTGGCCTGCGAGTGTTACTCCAGGTTGCCCTCGTTAGGTGCTGGCTTTTCCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp AGAGTATCCCTCCCAGTGCTCCAGGCATTGAGAACCTaGGGAAGCAGCCGGCTGATCAGGGCACCAAAACGC +
Preference number: 6 (lower is better)
Translates to: RVSLPVLQALRT*GSSRLIRAPKR
Trigger: GCGTTTTGGTGCCCTGATCAGCCGGCTGCTTCCCCAGGTTCTCAATGCCTGGAGCACTGGGAGGGATACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp CAGATACCAGGCCTGGGACAGAGAGGCCTAAATGGTTaGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACTT +
Preference number: 6 (lower is better)
Translates to: QIPGLGQRGLNG*LLLEVQGERAL
Trigger: AAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp AGAGCCCAGGTTCAGGTTCTGCCTCAGGCTGTACTTTaGGCGAGTCTGAAGGTGGCAGAGCAGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RAQVQVLPQAVL*ASLKVAEQVAV
Trigger: CACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAACCTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp ACAGATACCAGGCCTGGGACAGAGAGGCCTAAATGGTaGGCTGTTGCTGGAGGTCCAGGGCGAGAGGGCACT +
Preference number: 6 (lower is better)
Translates to: TDTRPGTERPKW*AVAGGPGREGT
Trigger: AGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTTAGGCCTCTCTGTCCCAGGCCTGGTATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp ATTTCTTCTGCAGGTGTCTCCGGTGGGGGTGGCACTTaGTCACCTCCACCCTCAGTCCCCTCTTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ISSAGVSGGGGT*SPPPSVPSSSR
Trigger: CCTGCTGGAAGAGGGGACTGAGGGTGGAGGTGACAAAGTGCCACCCCCACCGGAGACACCTGCAGAAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp AGAGCTGAAAGATTCTGCGCCCCACCTGCCGTCCCATaGAGCCTCAATAAGCACATGAGCCCGGGCAAATGC +
Preference number: 6 (lower is better)
Translates to: RAERFCAPPAVP*SLNKHMSPGKC
Trigger: GCATTTGCCCGGGCTCATGTGCTTATTGAGGCTGCATGGGACGGCAGGTGGGGCGCAGAATCTTTCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS CCA 72 bp TGGTTGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTaGGATGCATGTCGGAGCAGATCCCTCAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: WLVEMSRNRVGS*DACRSRSLRTA
Trigger: GGCTGTCCTGAGGGATCTGCTCCGACATGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp TGCTTCTGTCTCCATTTCTTCTGCAGGTGTCTCCGGTaGGGGTGGCACTTTGTCACCTCCACCCTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: CFCLHFFCRCLR*GWHFVTSTLSP
Trigger: GGGACTGAGGGTGGAGGTGACAAAGTGCCACCCCCACCGGAGACACCTGCAGAAGAAATGGAGACAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp CGAGGGCAACCTGGAGTAACACTCGCAGGCCAGCTGTaGGAGCTGAGGGTTCAGGGAATCCAATCGAGACAG +
Preference number: 6 (lower is better)
Translates to: RGQPGVTLAGQL*ELRVQGIQSRQ
Trigger: CTGTCTCGATTGGATTCCCTGAACCCTCAGCTCCAACAGCTGGCCTGCGAGTGTTACTCCAGGTTGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp AAGAGCCCAGGTTCAGGTTCTGCCTCAGGCTGTACTTaGGGCGAGTCTGAAGGTGGCAGAGCAGGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: KSPGSGSASGCT*GESEGGRAGGS
Trigger: ACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAACCTGGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 90 bp ACTTCCAATAAGAGCCCAGGTTCAGGTTCTGCCTCAGGCTGTACTTaGGGCGAGTCTGAAGGTGGCAGAGCAGGTGGCAGTGTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: TSNKSPGSGSASGCT*GESEGGRAGGSVGG
Trigger: ACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGCAGAACCTGAACCTGGGCTCTTATTGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp AGCAGGCTGTGCAGCTCCTGTTCCCAGTTCTCTGTGTaGTTCAGTCCCTGGGAAAAGCCAGCACCTAACGAG +
Preference number: 6 (lower is better)
Translates to: SRLCSSCSQFSV*FSPWEKPAPNE
Trigger: CTCGTTAGGTGCTGGCTTTTCCCAGGGACTGAAGCACACAGAGAACTGGGAACAGGAGCTGCACAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp AGGCCCAGCAAGGAAGTAAGAAGCCCAGGAAGGTGGTaGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: RPSKEVRSPGRW*VEMSRNRVGSW
Trigger: CCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCACCTTCCTGGGCTTCTTACTTCCTTGCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 90 bp TCTGGTCTGAGGCCCAGCAAGGAAGTAAGAAGCCCAGGAAGGTGGTaGGTGGAGATGTCCCGAAACAGGGTAGGAAGCTGGGATGCATGT +
Preference number: 6 (lower is better)
Translates to: SGLRPSKEVRSPGRW*VEMSRNRVGSWDAC
Trigger: ACATGCATCCCAGCTTCCTACCCTGTTTCGGGACATCTCCACCAACCACCTTCCTGGGCTTCTTACTTCCTTGCTGGGCCTCAGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp ATACCAAGGATCCGGCAGATGAGGTCCAGGATTTCCTaGACAGGAACGGACACAGGAGCCCCAAACTCAGAG +
Preference number: 6 (lower is better)
Translates to: IPRIRQMRSRIS*TGTDTGAPNSE
Trigger: CTCTGAGTTTGGGGCTCCTGTGTCCGTTCCTGTGCAGGAAATCCTGGACCTCATCTGCCGGATCCTTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 90 bp TGCAGCTGCGCACACGTCACTGTTGGCATTCCTATCTCCTTTCCTTaGGCTGGGTGGAGCCAAAGCTTCCCCCATATCGAGCTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: CSCAHVTVGIPISFP*AGWSQSFPHIELEL
Trigger: AAGCTCAAGCTCGATATGGGGGAAGCTTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGTGACGTGTGCGCAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 72 bp ATGTGCATTACTGAGATTCACCAATGCCCCAAGAGCTaGAAGATTCTGCGCCCCACCTGCCGTCCCATGCAG +
Preference number: 6 (lower is better)
Translates to: MCITEIHQCPKS*KILRPTCRPMQ
Trigger: CTGCATGGGACGGCAGGTGGGGCGCAGAATCTTTCAGCTCTTGGGGCATTGGTGAATCTCAGTAATGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS GCA 72 bp CATAAGGATGGTCCGACTGAGGCCTCTCAGTGCAGCTaGGCACACGTCACTGTTGGCATTCCTATCTCCTTT +
Preference number: 6 (lower is better)
Translates to: HKDGPTEASQCS*AHVTVGIPISF
Trigger: AAAGGAGATAGGAATGCCAACAGTGACGTGTGCGCAGCTGCACTGAGAGGCCTCAGTCGGACCATCCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp AGGCCTGAAAACCTCTGCCGAAGCTGGAGGAGGACATaGGTGTTACCATCTTCTGAGTGGGAAAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: RPENLCRSWRRT*VLPSSEWESSI
Trigger: GATGCTGCTTTCCCACTCAGAAGATGGTAACACCCATGTCCTCCTCCAGCTTCGGCAGAGGTTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp CACACGTCACTGTTGGCATTCCTATCTCCTTTCCTTTaGCTGGGTGGAGCCAAAGCTTCCCCCATATCGAGC +
Preference number: 6 (lower is better)
Translates to: HTSLLAFLSPFL*LGGAKASPISS
Trigger: GCTCGATATGGGGGAAGCTTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGTGACGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp GCACACGTCACTGTTGGCATTCCTATCTCCTTTCCTTaGGCTGGGTGGAGCCAAAGCTTCCCCCATATCGAG +
Preference number: 6 (lower is better)
Translates to: AHVTVGIPISFP*AGWSQSFPHIE
Trigger: CTCGATATGGGGGAAGCTTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGTGACGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 72 bp GGGGTGTGTCAGAGCAGCACAGGTCACCAGAGCTTCTaGGCAAAAAGAGGAGACCTCAAGACTATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GVCQSSTGHQSF*AKRGDLKTIFP
Trigger: TGGGAAGATAGTCTTGAGGTCTCCTCTTTTTGCTCAGAAGCTCTGGTGACCTGTGCTGCTCTGACACACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 72 bp CAGGTGGTGGCTTCTCATCGTCAGGGGGACAATCGATaGAATCAGCCAGCATGGCAGCTGTATCATCTTGCT +
Preference number: 6 (lower is better)
Translates to: QVVASHRQGDNR*NQPAWQLYHLA
Trigger: AGCAAGATGATACAGCTGCCATGCTGGCTGATTTCATCGATTGTCCCCCTGACGATGAGAAGCCACCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CAA 72 bp GAGCTTGAGCTTCTTAGGAGCACTTGGCTTCCCACTTaGCAAACCTCCATCAGAGCTTCCCCTGGTACTGCA +
Preference number: 6 (lower is better)
Translates to: ELELLRSTWLPT*QTSIRASPGTA
Trigger: TGCAGTACCAGGGGAAGCTCTGATGGAGGTTTGCAAAGTGGGAAGCCAAGTGCTCCTAAGAAGCTCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp TTCCCCCATATCGAGCTTGAGCTTCTTAGGAGCACTTaGCTTCCCACTTTGCAAACCTCCATCAGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: FPHIELELLRST*LPTLQTSIRAS
Trigger: GGAAGCTCTGATGGAGGTTTGCAAAGTGGGAAGCCAAGTGCTCCTAAGAAGCTCAAGCTCGATATGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp ACTGTTGGCATTCCTATCTCCTTTCCTTTGGCTGGGTaGAGCCAAAGCTTCCCCCATATCGAGCTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: TVGIPISFPLAG*SQSFPHIELEL
Trigger: AAGCTCAAGCTCGATATGGGGGAAGCTTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS CCA 72 bp ACACCCACCCTGGAACTCAGGGGTTTCAGGACTTTCTaGAAAATTCAGAAGAACCTGCAGCACCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: TPTLELRGFRTF*KIQKNLQHLLD
Trigger: ATCCAGCAGGTGCTGCAGGTTCTTCTGAATTTTCCAGAAAGTCCTGAAACCCCTGAGTTCCAGGGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135148.2
CDS CAA 90 bp AGCAGCAGCAACCTGAGGGGACCATCTCCAAGCAAGTTAATATTCTaGCTACTGATACCAAGGATCCGGCAGATGAGGTCCAGGATTTCC +
Preference number: 6 (lower is better)
Translates to: SSSNLRGPSPSKLIF*LLIPRIRQMRSRIS
Trigger: GGAAATCCTGGACCTCATCTGCCGGATCCTTGGTATCAGTAGCAAGAATATTAACTTGCTTGGAGATGGTCCCCTCAGGTTGCTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp ATCAGAGTCGCTTTCCAAGGAGATCTCTACATCAGATaGCTCCTCCTTATCGTAGTGGACAAAGGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: IRVAFQGDLYIR*LLLIVVDKGWP
Trigger: AGGCCAGCCTTTGTCCACTACGATAAGGAGGAGGCATCTGATGTAGAGATCTCCTTGGAAAGCGACTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS TCA 72 bp AAAATAGGTCACACAAGCCTTCATTCCCTCCAAAGCTaGTTGTTCACACTCTGGTCTGAGGCCCAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: KIGHTSLHSLQS*LFTLWSEAQQG
Trigger: TCCTTGCTGGGCCTCAGACCAGAGTGTGAACAATCAGCTTTGGAGGGAATGAAGGCTTGTGTGACCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10
CDS GCA 72 bp GGACTTTCTGGAAAATTCAGAAGAACCTGCAGCACCTaGTGGATGCTCCGAAGCCAAGAAACACAATGTTGC +
Preference number: 6 (lower is better)
Translates to: GLSGKFRRTCST*WMLRSQETQCC
Trigger: GCAACATTGTGTTTCTTGGCTTCGGAGCATCCAGCAGGTGCTGCAGGTTCTTCTGAATTTTCCAGAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135148.2
CDS CCA 72 bp GAAGCCAAGAAACACAATGTTGCTGGAATAACTCTGTaGGGCTCTCCCCTATCAACAAGGACAGCAGACACA +
Preference number: 6 (lower is better)
Translates to: EAKKHNVAGITL*GSPLSTRTADT
Trigger: TGTGTCTGCTGTCCTTGTTGATAGGGGAGAGCCCCACAGAGTTATTCCAGCAACATTGTGTTTCTTGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019065.10
ENSMUST00000135148.2
CDS CAA 72 bp AACCTGAGGGGACCATCTCCAAGCAAGTTAATATTCTaGCTACTGATACCAAGGATCCGGCAGATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: NLRGPSPSKLIF*LLIPRIRQMRS
Trigger: GGACCTCATCTGCCGGATCCTTGGTATCAGTAGCAAGAATATTAACTTGCTTGGAGATGGTCCCCTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019065.10