Pregenerated sensors for PELO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042275Ensembl transcript IDs: ENSMUST00000109226.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATTTGAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTaGACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NLNTCPAHQIIKHLM*TQHTRNPSRINKCC Trigger: GCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTCAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| 3UTR-3UTR TCA 90 bp | GAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTGAACCCAACACACACCTGCCAAGGATGCTaGGAAAACCAGGGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: EYMSCPPNHKTLNVNPTHTCQGC*ENQGRN Trigger: GTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGT...GTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| 3UTR CCA 72 bp | CACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTaGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: HKKPQQDQQVLL*HLPRMLRKPGK Trigger: CTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| 3UTR TCA 72 bp | ACATGTCCTGCCCACCAAATCATAAAACACTTAATGTaGACCCAACACACAAGAAACCCCAGCAGGATCAAC | + |
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Preference number: 3 (lower is better) Translates to: TCPAHQIIKHLM*TQHTRNPSRIN Trigger: GTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGGACCTTGCGGATGGTaGAGGCGCGCAGGCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: EPNTQETPAGSTSAALAPGPCGW*RRAGCR Trigger: GCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCC...AGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | CCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCACACTGTCCACTAGCCTaGCATACCGGCTCCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PTHKKPQQDQQVLLWHLPHCPLA*HTGSGW Trigger: CCACCCGGAGCCGGTATGTCAGGCTAGTGGACAGTG...TGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | GAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTTGGTGCGGACACGGTTaGTCCCCACGCTGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EPNTQETPAGSTSAALAPWCGHG*SPRCLW Trigger: CCACAGGCAGCGTGGGGAGCAACCGTGTCCGCACCA...AGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | GCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGTGGGCCAGGCCCTCCTaGATGACCACAGCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: AGSTSAALAPAKDAEKTRWARPS*MTTAAT Trigger: TGTGGCAGCTGTGGTCATGCAGGAGGGCCTGGCCCA...CCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | CCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCGTGGAGGACTCGGTCTaGACCTTGCGGATGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PNTQETPAGSTSAALAPAVEDSV*TLRMVE Trigger: CTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCAC...GGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCGCAGCTGGCAGGCCTaGGAGTCGAAGTCGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: VNPTHKKPQQDQQVLLWHRSWQA*ESKSMA Trigger: GGCCATCGACTTCGACTCCCAGGCCTGCCAGCTGCG...GTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACGGGACGAGGGTGACCTaGCCCGCATTGTCCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: VNPTHKKPQQDQQVLLWHGTRVT*PALSFS Trigger: CGAGAAGGACAATGCGGGCCAGGTCACCCTCGTCCC...GTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | CCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGGCCCGGTCATGCTaGGAGCAGTTGCCTTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PTHKKPQQDQQVLLWHLPRARSC*EQLPFR Trigger: ACGGAAAGGCAACTGCTCCCAGCATGACCGGGCCCT...TGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | AAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGCTGGGAAGCGGAGAATaGCGGCTACTCCCGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KKPQQDQQVLLWHLPRMLLGSGE*RLLPSA Trigger: AGCTGACGGGAGTAGCCGCCATTCTCCGCTTCCCAG...CAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | ACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTCCAGGCCCTCCTGCATaGCCACAGCTGCCACATCAG | + |
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Preference number: 4 (lower is better) Translates to: TSAALAPAKDAEKTREETPGPPA*PQLPHQ Trigger: CTGATGTGGCAGCTGTGGTCATGCAGGAGGGCCTGG...AGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | GCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGCCCTCTCCACCTGCTTaGGTCCATAGAACGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: AGSTSAALAPAKDAEKTRPSPPA*VHRTLG Trigger: ACCGAGCGTTCTATGGACTCAAGCAGGTGGAGAGGG...CCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | TCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTCGGTCTGGACCTTaGGGATGGTGGAGGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: STSAALAPAKDAEKTREETRSGP*GWWRRA Trigger: TGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGT...TTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | CAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTACATACCGGCTCCGGGTaGCCACATCCTGATGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: QVLLWHLPRMLRKPGKKLHTGSG*PHPDAG Trigger: TCCGGCATCAGGATGTGGCCACCCGGAGCCGGTATG...TAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | TGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCATCCAGGGCCCGGTCATaGTGGGAGCAGTTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: CEPNTQETPAGSTSAALASRARS*WEQLPF Trigger: GAAAGGCAACTGCTCCCAGCATGACCGGGCCCTGGA...TGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | AAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGTGGGCTCCAGTTCGATaGTGTGGTAAGCCCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: KKPQQDQQVLLWHLPRMLWAPVR*CGKPPS Trigger: AGATGGGGGCTTACCACACCATCGAACTGGAGCCCA...CAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | AATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGTTGGCCAGGGTGAACTaGCGGTTGGGCTCCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: NVNPTHKKPQQDQQVLLWLARVN*RLGSSS Trigger: CGAACTGGAGCCCAACCGCCAGTTCACCCTGGCCAA...CCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTTGCCTTTCCGTTTCCTaGGGATGTTCACCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: EPNTQETPAGSTSAALAPCLSVS*GCSPPP Trigger: AGGTGGAGGTGAACATCCCCAGGAAACGGAAAGGCA...AGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGCACCTGAAGGAATTTaGAGCGGTTTTCCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: AGSTSAALAPAKDAEKTRAPEGI*SGFPGA Trigger: TGCTCCTGGAAAACCGCTCCAAATTCCTTCAGGTGC...CCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | CATAAAACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAACCTCGGGGACGAGGGTaGCCTGGCCCGCATTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HKTLNVNPTHKKPQQDQQPRGRG*PGPHCP Trigger: AGGACAATGCGGGCCAGGTCACCCTCGTCCCCGAGG...TTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | GTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCCACCTGCACTAAATTaGAGGTGTGCCACATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VNPTHKKPQQDQQVLLWHPPALN*RCATCP Trigger: AGGACATGTGGCACACCTTCAATTTAGTGCAGGTGG...GTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | ACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGGTTTCTTGGCCAGGGTaGACTGGCGGTTGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLNVNPTHKKPQQDQQVLVSWPG*TGGWAP Trigger: TGGAGCCCAACCGCCAGTTCACCCTGGCCAAGAAAC...CAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | ACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGGTGACTAAGCAGACGTaGGCCAGGCCCTCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: TLNVNPTHKKPQQDQQVLVTKQT*ARPSCM Trigger: CATGCAGGAGGGCCTGGCCCACGTCTGCTTAGTCAC...CAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | TCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTAAATTGAAGGTGTaGCACATGTCCTCGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: STSAALAPAKDAEKTREETKLKV*HMSSGS Trigger: GGAGCCCGAGGACATGTGGCACACCTTCAATTTAGT...TTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTAGAAAGTTCTGGCACTaGGAAGCGGAGAATGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WHLPRMLRKPGKKLLTASRKFWH*EAENGG Trigger: GCCGCCATTCTCCGCTTCCCAGTGCCAGAACTTTCT...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAATTGGTCAGAAAGTTCTaGCACTGGGAAGCGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GSTSAALAPAKDAEKTRELVRKF*HWEAEN Trigger: ATTCTCCGCTTCCCAGTGCCAGAACTTTCTGACCAA...TTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | CCAAATCATAAAACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATTCTGGACCTTGCGGATaGTGGAGGCGCGCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PNHKTLNVNPTHKKPQQDSGPCG*WRRAGC Trigger: ACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGA...ATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | GAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTTGTTCCCCCGACACATaGAGACTAGAGAATATCCTT | + |
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Preference number: 4 (lower is better) Translates to: EPNTQETPAGSTSAALAPCSPDT*RLENIL Trigger: AAGGATATTCTCTAGTCTCCATGTGTCGGGGGAACA...AGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | AATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGGGTAAGCCCCCATCTTaGCATACTCATTCTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NVNPTHKKPQQDQQVLLWGKPPS*HTHSLG Trigger: TCCAAGAGAATGAGTATGTCAAGATGGGGGCTTACC...CCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | CCAAATCATAAAACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCTGCATGACCACAGCTaGCACATCAGCGCTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: PNHKTLNVNPTHKKPQQDLHDHS*HISAPR Trigger: GCGTGGAGCGCTGATGTGGCAGCTGTGGTCATGCAG...ATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTCATTCTCTTGGATATTaGTCCCCTTCACCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WHLPRMLRKPGKKLLTASHSLGY*SPSPAA Trigger: AGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATG...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | TTTGAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTGAACCCAACAGGGTCATGCTGGGCGTaGCTAAGCAGACGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FEYMSCPPNHKTLNVNPTGSCWA*LSRRGP Trigger: TGGCCCACGTCTGCTTAGTCACGCCCAGCATGACCC...TGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR TCA 90 bp | GAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTGAACCCAACACACCGCTGCCTTTGTGTCTaGAAGGCGGCTCGCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: EYMSCPPNHKTLNVNPTHRCLCV*KAARYS Trigger: ACTGTAGCGAGCCGCCTTTCAGACACAAAGGCAGCG...GTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | TTTGAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTGAACCCAACAGGTTGCTCCCCACGCTaGCTGTGGAGGACTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FEYMSCPPNHKTLNVNPTGCSPR*LWRTRS Trigger: AGACCGAGTCCTCCACAGGCAGCGTGGGGAGCAACC...TGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | ACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTCTTGAATCATCCTCTTaGTCAGAAAGTTCTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TSAALAPAKDAEKTREETLESSS*SESSGT Trigger: AGTGCCAGAACTTTCTGACCAAGAGGATGATTCAAG...AGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR GCA 90 bp | CCAAATCATAAAACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCGCAAGCCTGCTCGATaGGTTCCAGAACCACACTGT | + |
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Preference number: 4 (lower is better) Translates to: PNHKTLNVNPTHKKPQQDRKPAR*VPEPHC Trigger: ACAGTGTGGTTCTGGAACGCATCGAGCAGGCTTGCG...ATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CCA 90 bp | TTTGAATACATGTCCTGCCCACCAAATCATAAAACACTTAATGTGAACCCAACAAAGTTTATGTGGCGCTaGATGGCCTGGACCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: FEYMSCPPNHKTLNVNPTKFMWR*MAWTTC Trigger: ACAGGTGGTCCAGGCCATCCAGCGCCACATAAACTT...TGTTGGGTTCACATTAAGTGTTTTATGATTTGGTGGGCAGGACATGTATTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 90 bp | GTGCGGACACGGTTGCTCCCCACGCTGCCTGTGGAGGACTCGGTCTaGACCTTGCGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: VRTRLLPTLPVEDSV*TLRMVEARRLSPTC Trigger: GCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGAGCAACCGTGTCCGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 90 bp | GCTGGCAGGCCTGGGAGTCGAAGTCGATGGCCTCCACGCAAAGGGTaGGGGTGGTGCGGACACGGTTGCTCCCCACGCTGCCTGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AGRPGSRSRWPPRKG*GWCGHGCSPRCLWR Trigger: CCTCCACAGGCAGCGTGGGGAGCAACCGTGTCCGCACCACCCTCACCCTTTGCGTGGAGGCCATCGACTTCGACTCCCAGGCCTGCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 90 bp | GTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAATTGAAGGTGTaGCACATGTCCTCGGGCTCCTCGGGGACGAGGGTGACCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VEARRLSPTCTKLKV*HMSSGSSGTRVTWP Trigger: GGGCCAGGTCACCCTCGTCCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 90 bp | CACGGTTGCTCCCCACGCTGCCTGTGGAGGACTCGGTCTGGACCTTaGGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAAT | + |
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Preference number: 5 (lower is better) Translates to: HGCSPRCLWRTRSGP*GWWRRAGCRPPALN Trigger: ATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGAGCAACCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 90 bp | AGGGTCATGCTGGGCGTGACTAAGCAGACGTGGGCCAGGCCCTCCTaGATGACCACAGCTGCCACATCAGCGCTCCACGCCGGGTCGCAA | + |
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Preference number: 5 (lower is better) Translates to: RVMLGVTKQTWARPS*MTTAATSALHAGSQ Trigger: TTGCGACCCGGCGTGGAGCGCTGATGTGGCAGCTGTGGTCATGCAGGAGGGCCTGGCCCACGTCTGCTTAGTCACGCCCAGCATGACCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 90 bp | GTCTGGACCTTGCGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCTaGACTAAATTGAAGGTGTGCCACATGTCCTCGGGCTCCTCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VWTLRMVEARRLSPT*TKLKVCHMSSGSSG Trigger: CCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 90 bp | ACCTTGGCCCGGGTAAGGGTCATGCTGGGCGTGACTAAGCAGACGTaGGCCAGGCCCTCCTGCATGACCACAGCTGCCACATCAGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLARVRVMLGVTKQT*ARPSCMTTAATSAL Trigger: GAGCGCTGATGTGGCAGCTGTGGTCATGCAGGAGGGCCTGGCCCACGTCTGCTTAGTCACGCCCAGCATGACCCTTACCCGGGCCAAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 90 bp | CCTGTTCATAGAACCGCTCCAGGGCCCGGTCATGCTGGGAGCAGTTaGCTTTCCGTTTCCTGGGGATGTTCACCTCCACCTTGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVHRTAPGPGHAGSS*LSVSWGCSPPPWPG Trigger: CCCGGGCCAAGGTGGAGGTGAACATCCCCAGGAAACGGAAAGGCAACTGCTCCCAGCATGACCGGGCCCTGGAGCGGTTCTATGAACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS GCA 90 bp | ATGACCACAGCTGCCACATCAGCGCTCCACGCCGGGTCGCAAGCCTaGTCGATGCGTTCCAGAACCACACTGTCCCACTGTTTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MTTAATSALHAGSQA*SMRSRTTLSHCFLA Trigger: GGCCAAGAAACAGTGGGACAGTGTGGTTCTGGAACGCATCGAGCAGGCTTGCGACCCGGCGTGGAGCGCTGATGTGGCAGCTGTGGTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 90 bp | TCATTCTCTTGGATATTGGTCCCCTTCACCCGCAGCTGGCAGGCCTaGGAGTCGAAGTCGATGGCCTCCACGCAAAGGGTGAGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSWILVPFTRSWQA*ESKSMASTQRVRVV Trigger: CACCACCCTCACCCTTTGCGTGGAGGCCATCGACTTCGACTCCCAGGCCTGCCAGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 90 bp | CGATGCGTTCCAGAACCACACTGTCCCACTGTTTCTTGGCCAGGGTaGACTGGCGGTTGGGCTCCAGTTCGATGGTGTGGTAAGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RCVPEPHCPTVSWPG*TGGWAPVRWCGKPP Trigger: TGGGGGCTTACCACACCATCGAACTGGAGCCCAACCGCCAGTTCACCCTGGCCAAGAAACAGTGGGACAGTGTGGTTCTGGAACGCATCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGCTTCGCCCGCTGCCTTaGTGTCTGAAAGGCGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KKPQQDQQVLLWHLPRMLLRPLP*CLKGGS Trigger: CGAGCCGCCTTTCAGACACAAAGGCAGCGGGCGAAG...CAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS TCA 90 bp | ACACTGTCCACTAGCCTGACATACCGGCTCCGGGTGGCCACATCCTaGTGCCGGAAGAGCTCGTCACTGATGAGCAAAGTGTCTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSTSLTYRLRVATS*CRKSSSLMSKVSMA Trigger: GGCCATAGACACTTTGCTCATCAGTGACGAGCTCTTCCGGCATCAGGATGTGGCCACCCGGAGCCGGTATGTCAGGCTAGTGGACAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS TCA 90 bp | ATATCCTTACGGTGCCCGCATTCTCCTTCACACTGTCCACTAGCCTaGCATACCGGCTCCGGGTGGCCACATCCTGATGCCGGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLRCPHSPSHCPLA*HTGSGWPHPDAGRA Trigger: AGCTCTTCCGGCATCAGGATGTGGCCACCCGGAGCCGGTATGTCAGGCTAGTGGACAGTGTGAAGGAGAATGCGGGCACCGTAAGGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 90 bp | ATGGCGGCTACTCCCGTCAGCTGGCCCAGCTGTTCCCCCGACACATaGAGACTAGAGAATATCCTTACGGTGCCCGCATTCTCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MAATPVSWPSCSPDT*RLENILTVPAFSFT Trigger: TGTGAAGGAGAATGCGGGCACCGTAAGGATATTCTCTAGTCTCCATGTGTCGGGGGAACAGCTGGGCCAGCTGACGGGAGTAGCCGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 90 bp | AGTTCTGGCACTGGGAAGCGGAGAATGGCGGCTACTCCCGTCAGCTaGCCCAGCTGTTCCCCCGACACATGGAGACTAGAGAATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGTGKRRMAATPVS*PSCSPDTWRLENIL Trigger: AAGGATATTCTCTAGTCTCCATGTGTCGGGGGAACAGCTGGGCCAGCTGACGGGAGTAGCCGCCATTCTCCGCTTCCCAGTGCCAGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 90 bp | AATCATCCTCTTGGTCAGAAAGTTCTGGCACTGGGAAGCGGAGAATaGCGGCTACTCCCGTCAGCTGGCCCAGCTGTTCCCCCGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: NHPLGQKVLALGSGE*RLLPSAGPAVPPTH Trigger: ATGTGTCGGGGGAACAGCTGGGCCAGCTGACGGGAGTAGCCGCCATTCTCCGCTTCCCAGTGCCAGAACTTTCTGACCAAGAGGATGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 90 bp | TTGACATACTCATTCTCTTGGATATTGGTCCCCTTCACCCGCAGCTaGCAGGCCTGGGAGTCGAAGTCGATGGCCTCCACGCAAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTYSFSWILVPFTRS*QAWESKSMASTQRV Trigger: CACCCTTTGCGTGGAGGCCATCGACTTCGACTCCCAGGCCTGCCAGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGAGTATGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 90 bp | CCACCAGAACGCACTTTACAACCTCGAAGTTTATGTGGCGCTGGATaGCCTGGACCACCTGTTCATAGAACCGCTCCAGGGCCCGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPERTLQPRSLCGAG*PGPPVHRTAPGPGH Trigger: ATGACCGGGCCCTGGAGCGGTTCTATGAACAGGTGGTCCAGGCCATCCAGCGCCACATAAACTTCGAGGTTGTAAAGTGCGTTCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | CCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCGTGACCTGGCCCGCATaGTCCTTCTCGATATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNTQETPAGSTSAALAPAVTWPA*SFSISF Trigger: GAAGGATATCGAGAAGGACAATGCGGGCCAGGTCAC...GGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTGACTCGGTCTGGACCTaGCGGATGGTGGAGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WHLPRMLRKPGKKLLTASDSVWT*RMVEAR Trigger: GCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTC...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS-3UTR CAA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTGTGGTGCGGACACGGTaGCTCCCCACGCTGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WHLPRMLRKPGKKLLTASVVRTR*LPTLPV Trigger: CACAGGCAGCGTGGGGAGCAACCGTGTCCGCACCAC...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGATGTTCACCTCCACCTaGGCCCGGGTAAGGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KKPQQDQQVLLWHLPRMLMFTST*ARVRVM Trigger: CATGACCCTTACCCGGGCCAAGGTGGAGGTGAACAT...CAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 90 bp | GTAGAAGTCATCCAAGGCTTTTACTTCGCCCGCTGCCTTTGTGTCTaGAAGGCGGCTCGCTACAGTAGGGTCGCAGAGGGCCTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VEVIQGFYFARCLCV*KAARYSRVAEGLFQ Trigger: CTGAAAGAGGCCCTCTGCGACCCTACTGTAGCGAGCCGCCTTTCAGACACAAAGGCAGCGGGCGAAGTAAAAGCCTTGGATGACTTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS TCA 90 bp | ACTGGCGGTTGGGCTCCAGTTCGATGGTGTGGTAAGCCCCCATCTTaGCATACTCATTCTCTTGGATATTGGTCCCCTTCACCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TGGWAPVRWCGKPPS*HTHSLGYWSPSPAA Trigger: AGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGAGTATGTCAAGATGGGGGCTTACCACACCATCGAACTGGAGCCCAACCGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS TCA 90 bp | GCAAAGTGTCTATGGCCAAGGCTTCGTTGGCCCTCTCCACCTGCTTaGGTCCATAGAACGCTCGGTCGGGCTCGTGCTGTAACATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AKCLWPRLRWPSPPA*VHRTLGRARAVTFC Trigger: ACAAAATGTTACAGCACGAGCCCGACCGAGCGTTCTATGGACTCAAGCAGGTGGAGAGGGCCAACGAAGCCTTGGCCATAGACACTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTCTGTCCCACTGTTTCTaGGCCAGGGTGAACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WHLPRMLRKPGKKLLTASLSHCF*ARVNWR Trigger: CCGCCAGTTCACCCTGGCCAAGAAACAGTGGGACAG...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | TGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCATCTTTCAGGGAGTACTaGTGTCCAGAGGAGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CEPNTQETPAGSTSAALASFREY*CPEEAC Trigger: GCACGCCTCCTCTGGACACAAGTACTCCCTGAAAGA...TGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | CTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTATGGCCAAGGCTTCGTaGGCCCTCTCCACCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLWHLPRMLRKPGKKLLTMAKAS*ALSTCL Trigger: CAAGCAGGTGGAGAGGGCCAACGAAGCCTTGGCCAT...AGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 90 bp | GCTGAAACATGTAATCGCAGAACTGCTCTCGCACGAATCCAGGGCTaGCCACCAGAACGCACTTTACAACCTCGAAGTTTATGTGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AETCNRRTALARIQG*PPERTLQPRSLCGA Trigger: AGCGCCACATAAACTTCGAGGTTGTAAAGTGCGTTCTGGTGGCCAGCCCTGGATTCGTGCGAGAGCAGTTCTGCGATTACATGTTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | TCAACAAGTGCTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAATCATTCTCTTGGATATaGGTCCCCTTCACCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: STSAALAPAKDAEKTREESFSWI*VPFTRS Trigger: GCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGA...TTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAGCACTTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | ACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCCCACCTGCACTAAATaGAAGGTGTGCCACATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLNVNPTHKKPQQDQQVLPTCTK*KVCHMS Trigger: GGACATGTGGCACACCTTCAATTTAGTGCAGGTGGG...CAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | CCAAATCATAAAACACTTAATGTGAACCCAACACACAAGAAACCCCAGCAGGATAGGGTGAACTGGCGGTaGGGCTCCAGTTCGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNHKTLNVNPTHKKPQQDRVNWR*GSSSMV Trigger: CACCATCGAACTGGAGCCCAACCGCCAGTTCACCCT...ATCCTGCTGGGGTTTCTTGTGTGTTGGGTTCACATTAAGTGTTTTATGATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | GAACCCAACACACAAGAAACCCCAGCAGGATCAACAAGTGCTGCTCTGGCACCTAATCCTCTTCAGAACTaGAATCATCCTCTTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPNTQETPAGSTSAALAPNPLQN*NHPLGQ Trigger: CTGACCAAGAGGATGATTCAAGTTCTGAAGAGGATT...AGGTGCCAGAGCAGCACTTGTTGATCCTGCTGGGGTTTCTTGTGTGTTGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGCCAGTGTCCGTCTTCACAGCTaGCTGAAACATGTAATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: WHLPRMLRKPGKKLLTASVRLHS*LKHVIA Trigger: TGCGATTACATGTTTCAGCAAGCTGTGAAGACGGAC...ACTGGCAGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS-3UTR CAA 90 bp | CTGCTCTGGCACCTGCCAAGGATGCTGAGAAAACCAGGGAAGAAACTATTAACTGACATACTCATTCTCTaGGATATTGGTCCCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLWHLPRMLRKPGKKLLTDILIL*DIGPLH Trigger: GTGAAGGGGACCAATATCCAAGAGAATGAGTATGTC...AGTTAATAGTTTCTTCCCTGGTTTTCTCAGCATCCTTGGCAGGTGCCAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 72 bp | CTCCCCACGCTGCCTGTGGAGGACTCGGTCTGGACCTaGCGGATGGTGGAGGCGCGCAGGCTGTCGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LPTLPVEDSVWT*RMVEARRLSPT Trigger: GGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 72 bp | TCCCCACGCTGCCTGTGGAGGACTCGGTCTGGACCTTaGGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRCLWRTRSGP*GWWRRAGCRPP Trigger: AGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 72 bp | GCAGACGTGGGCCAGGCCCTCCTGCATGACCACAGCTaGCACATCAGCGCTCCACGCCGGGTCGCAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ADVGQALLHDHS*HISAPRRVASL Trigger: CAGGCTTGCGACCCGGCGTGGAGCGCTGATGTGGCAGCTGTGGTCATGCAGGAGGGCCTGGCCCACGTCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | CGGTTGCTCCCCACGCTGCCTGTGGAGGACTCGGTCTaGACCTTGCGGATGGTGGAGGCGCGCAGGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLLPTLPVEDSV*TLRMVEARRLS Trigger: CGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGAGCAACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | CGCTGCCTGTGGAGGACTCGGTCTGGACCTTGCGGATaGTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: RCLWRTRSGPCG*WRRAGCRPPAL Trigger: TAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | CCTGGGAGTCGAAGTCGATGGCCTCCACGCAAAGGGTaGGGGTGGTGCGGACACGGTTGCTCCCCACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSRSRWPPRKG*GWCGHGCSPRC Trigger: GCAGCGTGGGGAGCAACCGTGTCCGCACCACCCTCACCCTTTGCGTGGAGGCCATCGACTTCGACTCCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | ACACGGTTGCTCCCCACGCTGCCTGTGGAGGACTCGGTCTGGACCTaGCGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TRLLPTLPVEDSVWT*RMVEARRLSPTCTK Trigger: TTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCAGCGTGGGGAGCAACCGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 72 bp | GTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAATaGAAGGTGTGCCACATGTCCTCGGGCTCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VEARRLSPTCTK*KVCHMSSGSSG Trigger: CCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | TTGCGGATGGTGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAATaGAAGGTGTGCCACATGTCCTCGGGCTCCTCGGGGACGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRMVEARRLSPTCTK*KVCHMSSGSSGTRV Trigger: CACCCTCGTCCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | TGGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAATTaGAGGTGTGCCACATGTCCTCGGGCTCCTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WRRAGCRPPALN*RCATCPRAPRG Trigger: TCCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 72 bp | CGCAGGCTGTCGCCCACCTGCACTAAATTGAAGGTGTaGCACATGTCCTCGGGCTCCTCGGGGACGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRLSPTCTKLKV*HMSSGSSGTRV Trigger: CACCCTCGTCCCCGAGGAGCCCGAGGACATGTGGCACACCTTCAATTTAGTGCAGGTGGGCGACAGCCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS GCA 72 bp | GCTGCCACATCAGCGCTCCACGCCGGGTCGCAAGCCTaGTCGATGCGTTCCAGAACCACACTGTCCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: AATSALHAGSQA*SMRSRTTLSHC Trigger: ACAGTGGGACAGTGTGGTTCTGGAACGCATCGAGCAGGCTTGCGACCCGGCGTGGAGCGCTGATGTGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 72 bp | TGCCTGTGGAGGACTCGGTCTGGACCTTGCGGATGGTaGAGGCGCGCAGGCTGTCGCCCACCTGCACTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLWRTRSGPCGW*RRAGCRPPALN Trigger: ATTTAGTGCAGGTGGGCGACAGCCTGCGCGCCTCCACCATCCGCAAGGTCCAGACCGAGTCCTCCACAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 72 bp | CGGGTAAGGGTCATGCTGGGCGTGACTAAGCAGACGTaGGCCAGGCCCTCCTGCATGACCACAGCTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RVRVMLGVTKQT*ARPSCMTTAAT Trigger: TGTGGCAGCTGTGGTCATGCAGGAGGGCCTGGCCCACGTCTGCTTAGTCACGCCCAGCATGACCCTTACCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS TCA 72 bp | CGGTGCCCGCATTCTCCTTCACACTGTCCACTAGCCTaGCATACCGGCTCCGGGTGGCCACATCCTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RCPHSPSHCPLA*HTGSGWPHPDA Trigger: GGCATCAGGATGTGGCCACCCGGAGCCGGTATGTCAGGCTAGTGGACAGTGTGAAGGAGAATGCGGGCACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 72 bp | CACATGTCCTCGGGCTCCTCGGGGACGAGGGTGACCTaGCCCGCATTGTCCTTCTCGATATCCTTCCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: HMSSGSSGTRVT*PALSFSISFLT Trigger: CGTGAGGAAGGATATCGAGAAGGACAATGCGGGCCAGGTCACCCTCGTCCCCGAGGAGCCCGAGGACATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS CCA 72 bp | ACTGGGAAGCGGAGAATGGCGGCTACTCCCGTCAGCTaGCCCAGCTGTTCCCCCGACACATGGAGACTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGKRRMAATPVS*PSCSPDTWRLE Trigger: CTCTAGTCTCCATGTGTCGGGGGAACAGCTGGGCCAGCTGACGGGAGTAGCCGCCATTCTCCGCTTCCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS GCA 72 bp | CATCAGCGCTCCACGCCGGGTCGCAAGCCTGCTCGATaGGTTCCAGAACCACACTGTCCCACTGTTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HQRSTPGRKPAR*VPEPHCPTVSW Trigger: CCAAGAAACAGTGGGACAGTGTGGTTCTGGAACGCATCGAGCAGGCTTGCGACCCGGCGTGGAGCGCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
||
| CDS GCA 72 bp | AGAACCGCTCCAGGGCCCGGTCATGCTGGGAGCAGTTaGCTTTCCGTTTCCTGGGGATGTTCACCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RTAPGPGHAGSS*LSVSWGCSPPP Trigger: AGGTGGAGGTGAACATCCCCAGGAAACGGAAAGGCAACTGCTCCCAGCATGACCGGGCCCTGGAGCGGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | CTTGGTCAGAAAGTTCTGGCACTGGGAAGCGGAGAATaGCGGCTACTCCCGTCAGCTGGCCCAGCTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LGQKVLALGSGE*RLLPSAGPAVP Trigger: GGGAACAGCTGGGCCAGCTGACGGGAGTAGCCGCCATTCTCCGCTTCCCAGTGCCAGAACTTTCTGACCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | TGGGAGCAGTTGCCTTTCCGTTTCCTGGGGATGTTCACCTCCACCTaGGCCCGGGTAAGGGTCATGCTGGGCGTGACTAAGCAGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: WEQLPFRFLGMFTST*ARVRVMLGVTKQTW Trigger: CCACGTCTGCTTAGTCACGCCCAGCATGACCCTTACCCGGGCCAAGGTGGAGGTGAACATCCCCAGGAAACGGAAAGGCAACTGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | TCATTCTCTTGGATATTGGTCCCCTTCACCCGCAGCTaGCAGGCCTGGGAGTCGAAGTCGATGGCCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: SFSWILVPFTRS*QAWESKSMAST Trigger: CGTGGAGGCCATCGACTTCGACTCCCAGGCCTGCCAGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | CAAGCCTGCTCGATGCGTTCCAGAACCACACTGTCCCACTGTTTCTaGGCCAGGGTGAACTGGCGGTTGGGCTCCAGTTCGATGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QACSMRSRTTLSHCF*ARVNWRLGSSSMVW Trigger: CCACACCATCGAACTGGAGCCCAACCGCCAGTTCACCCTGGCCAAGAAACAGTGGGACAGTGTGGTTCTGGAACGCATCGAGCAGGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | CCAGAACCACACTGTCCCACTGTTTCTTGGCCAGGGTaGACTGGCGGTTGGGCTCCAGTTCGATGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: PEPHCPTVSWPG*TGGWAPVRWCG Trigger: ACCACACCATCGAACTGGAGCCCAACCGCCAGTTCACCCTGGCCAAGAAACAGTGGGACAGTGTGGTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | ATCCAAGGCTTTTACTTCGCCCGCTGCCTTTGTGTCTaGAAGGCGGCTCGCTACAGTAGGGTCGCAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: IQGFYFARCLCV*KAARYSRVAEG Trigger: GCCCTCTGCGACCCTACTGTAGCGAGCCGCCTTTCAGACACAAAGGCAGCGGGCGAAGTAAAAGCCTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | ACTAGCCTGACATACCGGCTCCGGGTGGCCACATCCTaGTGCCGGAAGAGCTCGTCACTGATGAGCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: TSLTYRLRVATS*CRKSSSLMSKV Trigger: CACTTTGCTCATCAGTGACGAGCTCTTCCGGCATCAGGATGTGGCCACCCGGAGCCGGTATGTCAGGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | ACTCCCGTCAGCTGGCCCAGCTGTTCCCCCGACACATaGAGACTAGAGAATATCCTTACGGTGCCCGCATTC | + |
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Preference number: 6 (lower is better) Translates to: TPVSWPSCSPDT*RLENILTVPAF Trigger: GAATGCGGGCACCGTAAGGATATTCTCTAGTCTCCATGTGTCGGGGGAACAGCTGGGCCAGCTGACGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 72 bp | TTGCCTTTCCGTTTCCTGGGGATGTTCACCTCCACCTaGGCCCGGGTAAGGGTCATGCTGGGCGTGACTAAG | + |
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Preference number: 6 (lower is better) Translates to: LPFRFLGMFTST*ARVRVMLGVTK Trigger: CTTAGTCACGCCCAGCATGACCCTTACCCGGGCCAAGGTGGAGGTGAACATCCCCAGGAAACGGAAAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | CAGTTCGATGGTGTGGTAAGCCCCCATCTTGACATACTCATTCTCTaGGATATTGGTCCCCTTCACCCGCAGCTGGCAGGCCTGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: QFDGVVSPHLDILIL*DIGPLHPQLAGLGV Trigger: GACTCCCAGGCCTGCCAGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGAGTATGTCAAGATGGGGGCTTACCACACCATCGAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | CGCACTTTACAACCTCGAAGTTTATGTGGCGCTGGATaGCCTGGACCACCTGTTCATAGAACCGCTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RTLQPRSLCGAG*PGPPVHRTAPG Trigger: CCCTGGAGCGGTTCTATGAACAGGTGGTCCAGGCCATCCAGCGCCACATAAACTTCGAGGTTGTAAAGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 72 bp | GGTGTGGTAAGCCCCCATCTTGACATACTCATTCTCTaGGATATTGGTCCCCTTCACCCGCAGCTGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GVVSPHLDILIL*DIGPLHPQLAG Trigger: GCCTGCCAGCTGCGGGTGAAGGGGACCAATATCCAAGAGAATGAGTATGTCAAGATGGGGGCTTACCACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | TGTAATCGCAGAACTGCTCTCGCACGAATCCAGGGCTaGCCACCAGAACGCACTTTACAACCTCGAAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: CNRRTALARIQG*PPERTLQPRSL Trigger: TAAACTTCGAGGTTGTAAAGTGCGTTCTGGTGGCCAGCCCTGGATTCGTGCGAGAGCAGTTCTGCGATTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CCA 72 bp | ACTTGTGTCCAGAGGAGGCGTGCACCTGAAGGAATTTaGAGCGGTTTTCCAGGAGCACTTTATTGTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TCVQRRRAPEGI*SGFPGALYCPS Trigger: AGACGGACAATAAAGTGCTCCTGGAAAACCGCTCCAAATTCCTTCAGGTGCACGCCTCCTCTGGACACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS TCA 72 bp | TGGGCTCCAGTTCGATGGTGTGGTAAGCCCCCATCTTaGCATACTCATTCTCTTGGATATTGGTCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: WAPVRWCGKPPS*HTHSLGYWSPS Trigger: TGAAGGGGACCAATATCCAAGAGAATGAGTATGTCAAGATGGGGGCTTACCACACCATCGAACTGGAGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 90 bp | TTTGGAGCGGTTTTCCAGGAGCACTTTATTGTCCGTCTTCACAGCTaGCTGAAACATGTAATCGCAGAACTGCTCTCGCACGAATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FGAVFQEHFIVRLHS*LKHVIAELLSHESR Trigger: CCTGGATTCGTGCGAGAGCAGTTCTGCGATTACATGTTTCAGCAAGCTGTGAAGACGGACAATAAAGTGCTCCTGGAAAACCGCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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| CDS CAA 72 bp | GTTTTCCAGGAGCACTTTATTGTCCGTCTTCACAGCTaGCTGAAACATGTAATCGCAGAACTGCTCTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: VFQEHFIVRLHS*LKHVIAELLSH Trigger: GTGCGAGAGCAGTTCTGCGATTACATGTTTCAGCAAGCTGTGAAGACGGACAATAAAGTGCTCCTGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109226.5 |
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