Pregenerated sensors for PEG12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070526Ensembl transcript IDs: ENSMUST00000094339.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGGTGGAATGCAGTCACTGTCTCCAGGCAGTTTGTCTGGAAGCTaGAAGGAGTGGAAGGGGAGGGGGCCTCGGGCCAGAAGCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: KGGMQSLSPGSLSGS*KEWKGRGPRARSTD Trigger: GTCTGTGCTTCTGGCCCGAGGCCCCCTCCCCTTCCACTCCTTCCAGCTTCCAGACAAACTGCCTGGAGACAGTGACTGCATTCCACCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 90 bp | ATGCAGTCACTGTCTCCAGGCAGTTTGTCTGGAAGCTGGAAGGAGTaGAAGGGGAGGGGGCCTCGGGCCAGAAGCACAGACACTCAATAC | + |
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Preference number: 1 (lower is better) Translates to: MQSLSPGSLSGSWKE*KGRGPRARSTDTQY Trigger: GTATTGAGTGTCTGTGCTTCTGGCCCGAGGCCCCCTCCCCTTCCACTCCTTCCAGCTTCCAGACAAACTGCCTGGAGACAGTGACTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 90 bp | TCGGTGCTTCGCCATGCCCTTCCATCACCCAGCACTGCTCACTGCTaGCTCCCGCCCTACACTCATGGGATACAGCTTTCTTTCAACACT | + |
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Preference number: 1 (lower is better) Translates to: SVLRHALPSPSTAHC*LPPYTHGIQLSFNT Trigger: AGTGTTGAAAGAAAGCTGTATCCCATGAGTGTAGGGCGGGAGGCAGCAGTGAGCAGTGCTGGGTGATGGAAGGGCATGGCGAAGCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 90 bp | TGTCCTTTAAAAACACACTTTACAAAGGCAGGAGGGTTCACTCGGTaGTTCGCCATGCCCTTCCATCACCCAGCACTGCTCACTGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CPLKTHFTKAGGFTR*FAMPFHHPALLTAA Trigger: GGCAGCAGTGAGCAGTGCTGGGTGATGGAAGGGCATGGCGAAGCACCGAGTGAACCCTCCTGCCTTTGTAAAGTGTGTTTTTAAAGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 90 bp | TCCATCACCCAGCACTGCTCACTGCTGCCTCCCGCCCTACACTCATaGGATACAGCTTTCTTTCAACACTCTGCTAACAGCAACCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SITQHCSLLPPALHS*DTAFFQHSANSNPL Trigger: CAAAGGGTTGCTGTTAGCAGAGTGTTGAAAGAAAGCTGTATCCCATGAGTGTAGGGCGGGAGGCAGCAGTGAGCAGTGCTGGGTGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 90 bp | ATGGCAGGAGAGCCCTTAAAGGACTCCAGCATTTGCAAAACAGTGTaGTCATCCCTCAGCAAGGCAATTCGGTTAGTGTCTGTGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: MAGEPLKDSSICKTV*SSLSKAIRLVSVLK Trigger: CTTCAGCACAGACACTAACCGAATTGCCTTGCTGAGGGATGAGCACACTGTTTTGCAAATGCTGGAGTCCTTTAAGGGCTCTCCTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 90 bp | TCGTGGGTTTCAAACAGTTTGGGTCTCTCAACTCATGGAAATATTTaGGATATTTCGGCTGTCTTCCTTAGCTTATTTTCCTCTACGAGC | + |
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Preference number: 1 (lower is better) Translates to: SWVSNSLGLSTHGNI*DISAVFLSLFSSTS Trigger: GCTCGTAGAGGAAAATAAGCTAAGGAAGACAGCCGAAATATCGCAAATATTTCCATGAGTTGAGAGACCCAAACTGTTTGAAACCCACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTACCGTGGCCACGTGGTaGCTGCTTGGCCCGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VDQEPVLESTASNGDHCPTVATW*LLGPES Trigger: ACTCTCCGGGCCAAGCAGGCACCACGTGGCCACGGT...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTTCGGGGCGCTCCCCGAAATTATGTCCATTCCTGTTTCCTCCTCCCCCATCAGGAACCAGTCCTaGAAAGTACAGCAAGTAACG | + |
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Preference number: 2 (lower is better) Translates to: WHFGALPEIMSIPVSSSPIRNQS*KVQQVT Trigger: CGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGAT...GGGGGAGGAGGAAACAGGAATGGACATAATTTCGGGGAGCGCCCCGAAATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATCAGGACAGCCACAACTCCAGTCACTCTGGTGCGAAGAGTAGATATTGTCTTACAAAGGCCAGCTaGCACAGCTGGGGGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: YHQDSHNSSHSGAKSRYCLTKAS*HSWGRV Trigger: GACCCTCCCCCAGCTGTGCCAGCTGGCCTTTGTAAG...ACAATATCTACTCTTCGCACCAGAGTGACTGGAGTTGTGGCTGTCCTGATGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTTCGGGGCGCTCCCCGAAATTATGTCCATTCCTGTTTCCTCCTCCCCCGGGTTTCAAACAGTTTaGGTCTCTCAACTCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: WHFGALPEIMSIPVSSSPGFQTV*VSQLME Trigger: TTCCATGAGTTGAGAGACCCAAACTGTTTGAAACCC...GGGGGAGGAGGAAACAGGAATGGACATAATTTCGGGGAGCGCCCCGAAATGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGAGATGGCAGGAGAGCCCTTAAAGGACTCCAGCATTTGCAAAACAGTCAGCACCGCAAAAGATaGGATGGTCTTTTAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: PPRDGRRALKGLQHLQNSQHRKR*DGLLTV Trigger: GACAGTTAAAAGACCATCTCATCTTTTGCGGTGCTG...ACTGTTTTGCAAATGCTGGAGTCCTTTAAGGGCTCTCCTGCCATCTCTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATCAGGACAGCCACAACTCCAGTCACTCTGGTGCGAAGAGTAGATATTGTACAAGGGGGAAAAGGTaGAATGCAGTCACTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: YHQDSHNSSHSGAKSRYCTRGKR*NAVTVS Trigger: GGAGACAGTGACTGCATTCCACCTTTTCCCCCTTGT...ACAATATCTACTCTTCGCACCAGAGTGACTGGAGTTGTGGCTGTCCTGATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTACTCATGGAAATATTTaGGATATTTCGGCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VDQEPVLESTASNGDHCPTHGNI*DISAVF Trigger: GAAGACAGCCGAAATATCGCAAATATTTCCATGAGT...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATCAGGACAGCCACAACTCCAGTCACTCTGGTGCGAAGAGTAGATATTGTGGGTCTCTCAACTCATaGAAATATTTGCGATATTTC | + |
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Preference number: 2 (lower is better) Translates to: YHQDSHNSSHSGAKSRYCGSLNS*KYLRYF Trigger: GAAATATCGCAAATATTTCCATGAGTTGAGAGACCC...ACAATATCTACTCTTCGCACCAGAGTGACTGGAGTTGTGGCTGTCCTGATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAATGGGTGTCCTTTAAAAACACACTTTACAAAGGCAGGAGGGTTCACTCGCCGCAAAAGATGAGATaGTCTTTTAACTGTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: EEWVSFKNTLYKGRRVHSPQKMR*SFNCHK Trigger: TTTATGACAGTTAAAAGACCATCTCATCTTTTGCGG...CGAGTGAACCCTCCTGCCTTTGTAAAGTGTGTTTTTAAAGGACACCCATTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 72 bp | CTCGGTGCTTCGCCATGCCCTTCCATCACCCAGCACTaGTCACTGCTGCCTCCCGCCCTACACTCATGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LGASPCPSITQH*SLLPPALHSWD Trigger: ATCCCATGAGTGTAGGGCGGGAGGCAGCAGTGAGCAGTGCTGGGTGATGGAAGGGCATGGCGAAGCACCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 72 bp | ATGCAGTCACTGTCTCCAGGCAGTTTGTCTGGAAGCTaGAAGGAGTGGAAGGGGAGGGGGCCTCGGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: MQSLSPGSLSGS*KEWKGRGPRAR Trigger: TCTGGCCCGAGGCCCCCTCCCCTTCCACTCCTTCCAGCTTCCAGACAAACTGCCTGGAGACAGTGACTGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 72 bp | CTTCGCCATGCCCTTCCATCACCCAGCACTGCTCACTaGTGCCTCCCGCCCTACACTCATGGGATACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LRHALPSPSTAH*CLPPYTHGIQL Trigger: AAGCTGTATCCCATGAGTGTAGGGCGGGAGGCAGCAGTGAGCAGTGCTGGGTGATGGAAGGGCATGGCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 72 bp | CAGAAGGAGGAAATCAACTCTGTCTATCCAGAGAACTaGAGCTGTTCCCCGCAGAGCCGGCCCCTAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: QKEEINSVYPEN*SCSPQSRPLEL Trigger: GAGCTCTAGGGGCCGGCTCTGCGGGGAACAGCTGCAGTTCTCTGGATAGACAGAGTTGATTTCCTCCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 72 bp | AAAACACACTTTACAAAGGCAGGAGGGTTCACTCGGTaGTTCGCCATGCCCTTCCATCACCCAGCACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: KTHFTKAGGFTR*FAMPFHHPALL Trigger: GAGCAGTGCTGGGTGATGGAAGGGCATGGCGAAGCACCGAGTGAACCCTCCTGCCTTTGTAAAGTGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 72 bp | CAGCACTGCTCACTGCTGCCTCCCGCCCTACACTCATaGGATACAGCTTTCTTTCAACACTCTGCTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: QHCSLLPPALHS*DTAFFQHSANS Trigger: GCTGTTAGCAGAGTGTTGAAAGAAAGCTGTATCCCATGAGTGTAGGGCGGGAGGCAGCAGTGAGCAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 72 bp | CACTTGAGTAGAGCAGCAGAAACAAGGGGGAAAAGGTaGAATGCAGTCACTGTCTCCAGGCAGTTTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: HLSRAAETRGKR*NAVTVSRQFVW Trigger: CCAGACAAACTGCCTGGAGACAGTGACTGCATTCCACCTTTTCCCCCTTGTTTCTGCTGCTCTACTCAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR GCA 72 bp | GAGATGGCAGGAGAGCCCTTAAAGGACTCCAGCATTTaGAAAACAGTGTGCTCATCCCTCAGCAAGGCAATT | + |
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Preference number: 3 (lower is better) Translates to: EMAGEPLKDSSI*KTVCSSLSKAI Trigger: AATTGCCTTGCTGAGGGATGAGCACACTGTTTTGCAAATGCTGGAGTCCTTTAAGGGCTCTCCTGCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 72 bp | CACACCCAGGAAACTGACCTTGAACCCAAAGAGGAATaGGTGTCCTTTAAAAACACACTTTACAAAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HTQETDLEPKEE*VSFKNTLYKGR Trigger: CCTGCCTTTGTAAAGTGTGTTTTTAAAGGACACCCATTCCTCTTTGGGTTCAAGGTCAGTTTCCTGGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CCA 72 bp | TTTAAAACAAACCTAACTCGTGGGTTTCAAACAGTTTaGGTCTCTCAACTCATGGAAATATTTGCGATATTT | + |
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Preference number: 3 (lower is better) Translates to: FKTNLTRGFQTV*VSQLMEIFAIF Trigger: AAATATCGCAAATATTTCCATGAGTTGAGAGACCCAAACTGTTTGAAACCCACGAGTTAGGTTTGTTTTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS-3UTR CCA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTGCCCGGGGCAGCACATaGCGAGGCCGGGCCATCGTG | + |
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Preference number: 4 (lower is better) Translates to: VDQEPVLESTASNGDHCPARGST*RGRAIV Trigger: CACGATGGCCCGGCCTCGCCATGTGCTGCCCCGGGC...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS-3UTR GCA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTGATCCGCGTCGCTGTTaGTGGCGGCGGGACGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: VDQEPVLESTASNGDHCPDPRRC*WRRDAA Trigger: AGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATC...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS-3UTR CCA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTCCGGGCCATCGTGCCTaGCGTCCAGCTGCAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VDQEPVLESTASNGDHCPPGHRA*RPAAAS Trigger: AGACGCTGCAGCTGGACGCCAGGCACGATGGCCCGG...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| 3UTR CAA 72 bp | AGTCCCACTACACGGAACACACCCAGGAAACTGACCTaGAACCCAAAGAGGAATGGGTGTCCTTTAAAAACA | + |
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Preference number: 4 (lower is better) Translates to: SPTTRNTPRKLT*NPKRNGCPLKT Trigger: TGTTTTTAAAGGACACCCATTCCTCTTTGGGTTCAAGGTCAGTTTCCTGGGTGTGTTCCGTGTAGTGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 90 bp | CTCCGACTGAGATCCGCGTCGCTGTTGCTGGCGGCGGGACGCGGCTaGGTTCCGGAGCCAACCCCGCCGGCACCGGCCGGACAGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRLRSASLLLAAGRG*VPEPTPPAPAGQWL Trigger: CAGCCACTGTCCGGCCGGTGCCGGCGGGGTTGGCTCCGGAACGCAGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS TCA 90 bp | TGCAGGAGTCGGGGCGGGTCGCCGTCACTCGTGCGGGTCTCCGACTaGGATCCGCGTCGCTGTTGCTGGCGGCGGGACGCGGCTGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: CRSRGGSPSLVRVSD*DPRRCCWRRDAAAF Trigger: GAACGCAGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCACGAGTGACGGCGACCCGCCCCGACTCCTGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 90 bp | AAAGAAGGAGCTGCTGCAGGAGTCGGGGCGGGTCGCCGTCACTCGTaGGGGTCTCCGACTGAGATCCGCGTCGCTGTTGCTGGCGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: KEGAAAGVGAGRRHS*GSPTEIRVAVAGGG Trigger: CCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCACGAGTGACGGCGACCCGCCCCGACTCCTGCAGCAGCTCCTTCTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 90 bp | TCCCTAGTTCTGAGCTGTGCCCTCCATCACAATCGCCAGGGTCGCTaGAGGCTGCACGGGGGCTCCCGGGCAAAGGCGGCTCATGCACCG | + |
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Preference number: 5 (lower is better) Translates to: SLVLSCALHHNRQGR*RLHGGSRAKAAHAP Trigger: CGGTGCATGAGCCGCCTTTGCCCGGGAGCCCCCGTGCAGCCTGCAGCGACCCTGGCGATTGTGATGGAGGGCACAGCTCAGAACTAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 90 bp | TTATTAGCTGCCAGGGACAAGAAGGTCGTCCCTAGTTCTGAGCTGTaGCCTCCATCACAATCGCCAGGGTCGCTGCAGGCTGCACGGGGG | + |
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Preference number: 5 (lower is better) Translates to: LLAARDKKVVPSSEL*PPSQSPGSLQAARG Trigger: CCCCCGTGCAGCCTGCAGCGACCCTGGCGATTGTGATGGAGGGCACAGCTCAGAACTAGGGACGACCTTCTTGTCCCTGGCAGCTAATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS-3UTR CAA 90 bp | GTGGATCAGGAACCAGTCCTGGAAAGTACAGCAAGTAACGGGGATCATTGTCCTAGATCCGCGTCGCTGTaGCTGGCGGCGGGACGCGGC | + |
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Preference number: 5 (lower is better) Translates to: VDQEPVLESTASNGDHCPRSASL*LAAGRG Trigger: GCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCT...AGGACAATGATCCCCGTTACTTGCTGTACTTTCCAGGACTGGTTCCTGATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS-3UTR CAA 90 bp | CCTCCCAGAGATGGCAGGAGAGCCCTTAAAGGACTCCAGCATTTGCAAAACAGTAGCAGGAGGAAGCTGTaGTCGTCCTCCTCCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PPRDGRRALKGLQHLQNSSRRKL*SSSSPS Trigger: GGAGGGGGAGGAGGACGACAACAGCTTCCTCCTGCT...ACTGTTTTGCAAATGCTGGAGTCCTTTAAGGGCTCTCCTGCCATCTCTGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 72 bp | AGATCCGCGTCGCTGTTGCTGGCGGCGGGACGCGGCTaGGTTCCGGAGCCAACCCCGCCGGCACCGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RSASLLLAAGRG*VPEPTPPAPAG Trigger: TCCGGCCGGTGCCGGCGGGGTTGGCTCCGGAACGCAGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS TCA 72 bp | CGGGGCGGGTCGCCGTCACTCGTGCGGGTCTCCGACTaGGATCCGCGTCGCTGTTGCTGGCGGCGGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: RGGSPSLVRVSD*DPRRCCWRRDA Trigger: CGCGTCCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCACGAGTGACGGCGACCCGCCCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS CAA 90 bp | GTCGCCGTCACTCGTGCGGGTCTCCGACTGAGATCCGCGTCGCTGTaGCTGGCGGCGGGACGCGGCTGCGTTCCGGAGCCAACCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: VAVTRAGLRLRSASL*LAAGRGCVPEPTPP Trigger: CGGCGGGGTTGGCTCCGGAACGCAGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCACGAGTGACGGCGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 72 bp | GCTGCTGCAGGAGTCGGGGCGGGTCGCCGTCACTCGTaGGGGTCTCCGACTGAGATCCGCGTCGCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AAAGVGAGRRHS*GSPTEIRVAVA Trigger: AGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCACGAGTGACGGCGACCCGCCCCGACTCCTGCAGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 72 bp | CTGAGCTGTGCCCTCCATCACAATCGCCAGGGTCGCTaGAGGCTGCACGGGGGCTCCCGGGCAAAGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSCALHHNRQGR*RLHGGSRAKAA Trigger: AGCCGCCTTTGCCCGGGAGCCCCCGTGCAGCCTGCAGCGACCCTGGCGATTGTGATGGAGGGCACAGCTCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS TCA 72 bp | GGGGCTCCCGGGCAAAGGCGGCTCATGCACCGGGGCTaGCAAAGGCCCGAGGAACGAGTGAGCGGGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GAPGQRRLMHRG*QRPEERVSGKL Trigger: AAGCTTCCCGCTCACTCGTTCCTCGGGCCTTTGTCAGCCCCGGTGCATGAGCCGCCTTTGCCCGGGAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS CAA 72 bp | CGGCACCGGCCGGACAGTGGCTGCGGGATGCTTACTTaGCCCATCCCCGGGGATACCTCAAGGCCGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RHRPDSGCGMLT*PIPGDTSRPSC Trigger: GCAGCTCGGCCTTGAGGTATCCCCGGGGATGGGCAAAGTAAGCATCCCGCAGCCACTGTCCGGCCGGTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 72 bp | GGCACCGGCCGGACAGTGGCTGCGGGATGCTTACTTTaGCCATCCCCGGGGATACCTCAAGGCCGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GTGRTVAAGCLL*PSPGIPQGRAA Trigger: AGCAGCTCGGCCTTGAGGTATCCCCGGGGATGGGCAAAGTAAGCATCCCGCAGCCACTGTCCGGCCGGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS CAA 90 bp | GCACCGGGGCTGACAAAGGCCCGAGGAACGAGTGAGCGGGAAGCTTaGCCTGTAGCTGTAGCCCTCGCGAATGAAGTCTCCGCACCGCCT | + |
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Preference number: 6 (lower is better) Translates to: APGLTKARGTSEREA*PVAVALANEVSAPP Trigger: AGGCGGTGCGGAGACTTCATTCGCGAGGGCTACAGCTACAGGCAAAGCTTCCCGCTCACTCGTTCCTCGGGCCTTTGTCAGCCCCGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS TCA 72 bp | TCATGCACCGGGGCTGACAAAGGCCCGAGGAACGAGTaGGCGGGAAGCTTTGCCTGTAGCTGTAGCCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SCTGADKGPRNE*AGSFACSCSPR Trigger: GCGAGGGCTACAGCTACAGGCAAAGCTTCCCGCTCACTCGTTCCTCGGGCCTTTGTCAGCCCCGGTGCATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS GCA 72 bp | GCCAGGGACAAGAAGGTCGTCCCTAGTTCTGAGCTGTaGCCTCCATCACAATCGCCAGGGTCGCTGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARDKKVVPSSEL*PPSQSPGSLQA Trigger: AGCCTGCAGCGACCCTGGCGATTGTGATGGAGGGCACAGCTCAGAACTAGGGACGACCTTCTTGTCCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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| CDS CAA 72 bp | CTGACAAAGGCCCGAGGAACGAGTGAGCGGGAAGCTTaGCCTGTAGCTGTAGCCCTCGCGAATGAAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LTKARGTSEREA*PVAVALANEVS Trigger: GGAGACTTCATTCGCGAGGGCTACAGCTACAGGCAAAGCTTCCCGCTCACTCGTTCCTCGGGCCTTTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094339.3 |
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