Pregenerated sensors for PECR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026189Ensembl transcript IDs: ENSMUST00000027381.13, ENSMUST00000097698.5, ENSMUST00000129458.2, ENSMUST00000134840.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCAACAGCAGTCTGGGAGTAAATGGTCCCAGGAGCGACACAGTTaGTCCTCACTCCGCTGCTGGCCCACGCCAAAGCCATGGATTTTG | + |
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Preference number: 1 (lower is better) Translates to: CQQQSGSKWSQERHS*SSLRCWPTPKPWIL Trigger: CAAAATCCATGGCTTTGGCGTGGGCCAGCAGCGGAGTGAGGATCAACTGTGTCGCTCCTGGGACCATTTACTCCCAGACTGCTGTTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR TCA 90 bp | AGGCCCTTGATCCTAGCTCTTGGAAGACAGAGGCAGGTAGAGCTCTaGTTTCCAGGTCACCCTGGTCTACAGCGTGAGTTCCAGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RPLILALGRQRQVEL*FPGHPGLQREFQFS Trigger: GCTGAACTGGAACTCACGCTGTAGACCAGGGTGACCTGGAAATCAGAGCTCTACCTGCCTCTGTCTTCCAAGAGCTAGGATCAAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR GCA 90 bp | CCACGCCAAAGCCATGGATTTTGTGAGGTTGTAAACACCTTCTCTTaGCGCTCCAGTGTGCGCGGCTGTTGGAAACCCATTATTAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PRQSHGFCEVVNTFS*RSSVRGCWKPIIKK Trigger: CTTCTTAATAATGGGTTTCCAACAGCCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACAACCTCACAAAATCCATGGCTTTGGCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR CCA 90 bp | GAGGTTGTAAACACCTTCTCTTGCCGCTCCAGTGTGCGCGGCTGTTaGAAACCCATTATTAAGAAGGACAATGATATTGACAATCGACCC | + |
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Preference number: 1 (lower is better) Translates to: EVVNTFSCRSSVRGC*KPIIKKDNDIDNRP Trigger: GGGTCGATTGTCAATATCATTGTCCTTCTTAATAATGGGTTTCCAACAGCCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACAACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTGTCCCATTTCGCCATAGTTGTCAACAGCAGTCTGGGAGTAAATGGTCCGGGCGGCAGCGGTGGTaGAGGCCCTTGATCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: RFVPFRHSCQQQSGSKWSGRQRW*RPLILA Trigger: AGCTAGGATCAAGGGCCTGCACCACCGCTGCCGCCC...GGACCATTTACTCCCAGACTGCTGTTGACAACTATGGCGAAATGGGACAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTACAGAGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAGTTGGGCGGCAGCGGTaGTGCAGGCCCTTGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: SVQSLASIHIDQLSSDIGVGRQR*CRPLIL Trigger: TAGGATCAAGGGCCTGCACCACCGCTGCCGCCCAAC...TCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCTCTGTACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAAGCCGCAAGCCATGGATTTTGTaGGGTTGTAAACACCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QSLASIHIDQLSSDIGSRKPWIL*GCKHLL Trigger: GAGAAGGTGTTTACAACCTCACAAAATCCATGGCTT...GCGGCTTCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCATTTCGCCATAGTTGTCAACAGCAGTCTGGGAGTAAATGGTCCCAGGAGCAGTGTGCGCGGCTGTTaGAAACCCATTATTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SHFAIVVNSSLGVNGPRSSVRGC*KPIIKK Trigger: CTTCTTAATAATGGGTTTCCAACAGCCGCGCACACT...GCTCCTGGGACCATTTACTCCCAGACTGCTGTTGACAACTATGGCGAAATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR GCA 90 bp | ACATACCAGAGGGGAGATCTCCTCGGGGACTCCAAGGCGCTTAGCTGGGATACTTTTGGGAGCAGTCTTTaGAAAGATAAAGCTATTAAC | + |
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Preference number: 2 (lower is better) Translates to: TYQRGDLLGDSKALSWDTFGSSL*KDKAIN Trigger: GTTAATAGCTTTATCTTTGCAAAGACTGCTCCCAAA...AGTATCCCAGCTAAGCGCCTTGGAGTCCCCGAGGAGATCTCCCCTCTGGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGATTCCTTTATCCTCTTGACAATAGAAAGGTCCCCAGCTCCTACAGGCCACACGCAGGAACAAGATaGGTGGCTGTTTCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: KRFLYPLDNRKVPSSYRPHAGTR*VAVSLA Trigger: AGCCAAGGAAACAGCCACCCATCTTGTTCCTGCGTG...TGGCCTGTAGGAGCTGGGGACCTTTCTATTGTCAAGAGGATAAAGGAATCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGACAATAGAAAGGTCCCCAGCTCCTACAGGCCAGTTGTCATGATCCGGAAGAGACATTTATTTTaGGAGCAGTCTTTGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PLDNRKVPSSYRPVVMIRKRHLF*EQSLQR Trigger: TCTTTGCAAAGACTGCTCCCAAAATAAATGTCTCTT...CCGGATCATGACAACTGGCCTGTAGGAGCTGGGGACCTTTCTATTGTCAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCATTTGGGAGCAGTCTTTaGAAAGATAAAGCTATTAAC | + |
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Preference number: 2 (lower is better) Translates to: EIISSCEVGNILKALRHAFGSSL*KDKAIN Trigger: GTTAATAGCTTTATCTTTGCAAAGACTGCTCCCAAA...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAAAGAGACATTTATTTTaGGAGCAGTCTTTGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: EIISSCEVGNILKALRHAKRHLF*EQSLQR Trigger: TCTTTGCAAAGACTGCTCCCAAAATAAATGTCTCTT...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR TCA 72 bp | CAGTCTGGGAGTAAATGGTCCCAGGAGCGACACAGTTaGTCCTCACTCCGCTGCTGGCCCACGCCAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QSGSKWSQERHS*SSLRCWPTPKP Trigger: TGGCTTTGGCGTGGGCCAGCAGCGGAGTGAGGATCAACTGTGTCGCTCCTGGGACCATTTACTCCCAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR CCA 72 bp | GCGGCAGCGGTGGTGCAGGCCCTTGATCCTAGCTCTTaGAAGACAGAGGCAGGTAGAGCTCTGATTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: AAAVVQALDPSS*KTEAGRALISR Trigger: CCTGGAAATCAGAGCTCTACCTGCCTCTGTCTTCCAAGAGCTAGGATCAAGGGCCTGCACCACCGCTGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR TCA 72 bp | CTCCGCTGCTGGCCCACGCCAAAGCCATGGATTTTGTaGGGTTGTAAACACCTTCTCTTGCCGCTCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LRCWPTPKPWIL*GCKHLLLPLQC Trigger: ACACTGGAGCGGCAAGAGAAGGTGTTTACAACCTCACAAAATCCATGGCTTTGGCGTGGGCCAGCAGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCATTTCGCCATAGTTGTCAACAGCAGTCTGGGAGTAAATGGTCCCAGGAGCTGTAAACACCTTCTCTaGCCGCTCCAGTGTGCGCGG | + |
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Preference number: 3 (lower is better) Translates to: SHFAIVVNSSLGVNGPRSCKHLL*PLQCAR Trigger: CCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACA...GCTCCTGGGACCATTTACTCCCAGACTGCTGTTGACAACTATGGCGAAATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR TCA 72 bp | ATCCTAGCTCTTGGAAGACAGAGGCAGGTAGAGCTCTaGTTTCCAGGTCACCCTGGTCTACAGCGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ILALGRQRQVEL*FPGHPGLQREF Trigger: GAACTCACGCTGTAGACCAGGGTGACCTGGAAATCAGAGCTCTACCTGCCTCTGTCTTCCAAGAGCTAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR GCA 72 bp | AGCCATGGATTTTGTGAGGTTGTAAACACCTTCTCTTaGCGCTCCAGTGTGCGCGGCTGTTGGAAACCCATT | + |
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Preference number: 3 (lower is better) Translates to: SHGFCEVVNTFS*RSSVRGCWKPI Trigger: AATGGGTTTCCAACAGCCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACAACCTCACAAAATCCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAAGCCGCGATTCCTTTATCCTCTaGACAATAGAAAGGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: QSLASIHIDQLSSDIGSRDSFIL*TIERSP Trigger: TGGGGACCTTTCTATTGTCAAGAGGATAAAGGAATC...GCGGCTTCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAAGCCGCGAAGAGACATTTATTTaGGGAGCAGTCTTTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: QSLASIHIDQLSSDIGSREETFI*GAVFAK Trigger: CTTTGCAAAGACTGCTCCCAAAATAAATGTCTCTTC...GCGGCTTCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTTTATCCTCTTGACAATAGAAAGGTCCCCAGCTCCTACAGGCCAGTTGTGGCCTCCATCCACATaGATCAACTGTCCAGTGATA | + |
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Preference number: 3 (lower is better) Translates to: DSFILLTIERSPAPTGQLWPPST*INCPVI Trigger: TATCACTGGACAGTTGATCAATGTGGATGGAGGCCA...CAACTGGCCTGTAGGAGCTGGGGACCTTTCTATTGTCAAGAGGATAAAGGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | GTACAGAGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAAGCGAAGAGACATTTATTTaGGGAGCAGTCTTTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VQSLASIHIDQLSSDIGSEETFI*GAVFAK Trigger: CTTTGCAAAGACTGCTCCCAAAATAAATGTCTCTTC...GCTTCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCTCTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGAAGAGACATTTATTTaGGGAGCAGTCTTTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: EIISSCEVGNILKALRHAEETFI*GAVFAK Trigger: CTTTGCAAAGACTGCTCCCAAAATAAATGTCTCTTC...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| CDS-3UTR GCA 90 bp | AGCCTGGCCTCCATCCACATTGATCAACTGTCCAGTGATATAGGAAGCCGCAGGCAACAGCAGTCCAGGTaGAGGAGCTCCCGGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: SLASIHIDQLSSDIGSRRQQQSR*RSSRET Trigger: CGTCTCCCGGGAGCTCCTGCACCTGGACTGCTGTTG...CCTGCGGCTTCCTATATCACTGGACAGTTGATCAATGTGGATGGAGGCCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129458.2 |
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| CDS-3UTR GCA 90 bp | AAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTTTCCTTACGTTACACCCCAGGTaGAGGAGCTCCCGGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: KHSQGAKARRNKMGGCFLTLHPR*RSSRET Trigger: CGTCTCCCGGGAGCTCCTGCACCTGGGGTGTAACGT...AAGGAAACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTGTGACCACGGCCACTTaGTTCTTCAGCAACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRKHSQGAKARRNKMGGCVTTAT*FFSNPA Trigger: GGCCGGGTTGCTGAAGAACCAAGTGGCCGTGGTCAC...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| CDS-3UTR TCA 90 bp | GGGACTCCAAGGCGCTTAGCTGGGATACTGTCAAAGGCCATCTCAAATAAGGTTGCTTCCGGGAAGCAATaGCCACGTTACACCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GTPRRLAGILSKAISNKVASGKQ*PRYTPG Trigger: ACCTGGGGTGTAACGTGGTCATTGCTTCCCGGAAGC...AACCTTATTTGAGATGGCCTTTGACAGTATCCCAGCTAAGCGCCTTGGAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | TCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGACCACGGCCACTTaGTTCTTCAGCAACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SCEVGNILKALRHAGTRWVTTAT*FFSNPA Trigger: GGCCGGGTTGCTGAAGAACCAAGTGGCCGTGGTCAC...CCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| CDS-3UTR TCA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTCCTCTTCTTCTTTCCTaGTGTTGCACTGTATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRKHSQGAKARRNKMGGCPLLLS*CCTVWR Trigger: CCGCCATACAGTGCAACATCAGGAAAGAAGAAGAGG...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000134840.8 |
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| CDS-3UTR GCA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGACGTTACACCCCAGGTaGAGGAGCTCCCGGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQTLHPR*RSSRET Trigger: CGTCTCCCGGGAGCTCCTGCACCTGGGGTGTAACGT...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR GCA 90 bp | CACACAGAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGACGTTACACCCCAGGTaGAGGAGCTCCCGGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: HTEIISSCEVGNILKALRTLHPR*RSSRET Trigger: CGTCTCCCGGGAGCTCCTGCACCTGGGGTGTAACGT...CCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGTGACCACGGCCACTTaGTTCTTCAGCAACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: EIISSCEVGNILKALRHAVTTAT*FFSNPA Trigger: GGCCGGGTTGCTGAAGAACCAAGTGGCCGTGGTCAC...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAAGACTTCAGCGGAGCTaGAGGGAGGCAGAGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EIISSCEVGNILKALRHARLQRS*REAERL Trigger: GAGCCTCTCTGCCTCCCTCCAGCTCCGCTGAAGTCT...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGGTGACCACGGCCACTTaGTTCTTCAGCAACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQVTTAT*FFSNPA Trigger: GGCCGGGTTGCTGAAGAACCAAGTGGCCGTGGTCAC...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGACAGGAGCCATGAACTaGCCTCCTCCATTGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: SCEVGNILKALRHAGTRWTGAMN*PPPLLT Trigger: GGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGT...CCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR TCA 90 bp | CACACAGAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGGCTTCCGGGAAGCAATaGCCACGTTACACCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HTEIISSCEVGNILKALRASGKQ*PRYTPG Trigger: ACCTGGGGTGTAACGTGGTCATTGCTTCCCGGAAGC...CCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000134840.8 |
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| CDS-3UTR TCA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGGCTTCCGGGAAGCAATaGCCACGTTACACCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQASGKQ*PRYTPG Trigger: ACCTGGGGTGTAACGTGGTCATTGCTTCCCGGAAGC...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR TCA 90 bp | CACACAGAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCTTCCACAGGAGCCATaGACTGGCCTCCTCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: HTEIISSCEVGNILKALRLPQEP*TGLLHC Trigger: ACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAG...CCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTCTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR TCA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTAAGCCATGGATTTTGTaGGGTTGTAAACACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRKHSQGAKARRNKMGGCKPWIL*GCKHLL Trigger: GAGAAGGTGTTTACAACCTCACAAAATCCATGGCTT...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCACAGTCTGGGAGTAAATaGTCCCAGGAGCGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: EIISSCEVGNILKALRHAQSGSK*SQERHS Trigger: ACTGTGTCGCTCCTGGGACCATTTACTCCCAGACTG...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CCA 90 bp | TCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGAGTGTGCGCGGCTGTTaGAAACCCATTATTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SCEVGNILKALRHAGTRWSVRGC*KPIIKK Trigger: CTTCTTAATAATGGGTTTCCAACAGCCGCGCACACT...CCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CCA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGCAGTCTGGGAGTAAATaGTCCCAGGAGCGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQQSGSK*SQERHS Trigger: ACTGTGTCGCTCCTGGGACCATTTACTCCCAGACTG...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR TCA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTCTTCCACAGGAGCCATaGACTGGCCTCCTCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: PTTVRSKFTPQSFEKLLILPQEP*TGLLHC Trigger: ACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAG...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR GCA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCATGCACATGTAGAAGGTaGCTGTCAGGTTGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: EIISSCEVGNILKALRHACTCRR*LSGWFL Trigger: TAGAAACCAACCTGACAGGCACCTTCTACATGTGCA...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| 3UTR CAA 72 bp | AGCTTGGCTTTCTTCTTAAAAGATTCCTTTATCCTCTaGACAATAGAAAGGTCCCCAGCTCCTACAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLAFFLKDSFIL*TIERSPAPTGQ Trigger: CTGGCCTGTAGGAGCTGGGGACCTTTCTATTGTCAAGAGGATAAAGGAATCTTTTAAGAAGAAAGCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129458.2 ENSMUST00000134840.8 |
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| 3UTR CAA 72 bp | GCTGTTGGAAACCCATTATTAAGAAGGACAATGATATaGACAATCGACCCTCCGTGCTCTCTCATCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: AVGNPLLRRTMI*TIDPPCSLIQE Trigger: TTCCTGGATGAGAGAGCACGGAGGGTCGATTGTCAATATCATTGTCCTTCTTAATAATGGGTTTCCAACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134840.8 |
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| CDS-3UTR CCA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTACAGGAGCCATGAACTaGCCTCCTCCATTGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: PTTVRSKFTPQSFEKLLITGAMN*PPPLLT Trigger: GGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGT...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CCA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGAGTGTGCGCGGCTGTTaGAAACCCATTATTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQSVRGC*KPIIKK Trigger: CTTCTTAATAATGGGTTTCCAACAGCCGCGCACACT...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR TCA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTCCTCTTCTTCTTTCCTaGTGTTGCACTGTATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PTTVRSKFTPQSFEKLLIPLLLS*CCTVWR Trigger: CCGCCATACAGTGCAACATCAGGAAAGAAGAAGAGG...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR GCA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTTGCACATGTAGAAGGTaGCTGTCAGGTTGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: PTTVRSKFTPQSFEKLLICTCRR*LSGWFL Trigger: TAGAAACCAACCTGACAGGCACCTTCTACATGTGCA...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR TCA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTAAGCCATGGATTTTGTaGGGTTGTAAACACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PTTVRSKFTPQSFEKLLIKPWIL*GCKHLL Trigger: GAGAAGGTGTTTACAACCTCACAAAATCCATGGCTT...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTTGTAAACACCTTCTCTaGCCGCTCCAGTGTGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SRKHSQGAKARRNKMGGCCKHLL*PLQCAR Trigger: CCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACA...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS CCA 90 bp | GCATGCCATCCCTTCGCAGTGATGTCTTCCACAGGAGCCATGAACTaGCCTCCTCCATTGTTGACCAAGAAGTTGATCTTACCATACTTA | + |
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Preference number: 5 (lower is better) Translates to: ACHPFAVMSSTGAMN*PPPLLTKKLILPYL Trigger: TAAGTATGGTAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAGACATCACTGCGAAGGGATGGCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | AAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTTTCCTTAACTGGCCTCCTCCATaGTTGACCAAGAAGTTGATC | + |
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Preference number: 5 (lower is better) Translates to: KHSQGAKARRNKMGGCFLNWPPP*LTKKLI Trigger: GATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTT...AAGGAAACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CAA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGTGTAAACACCTTCTCTaGCCGCTCCAGTGTGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQCKHLL*PLQCAR Trigger: CCGCGCACACTGGAGCGGCAAGAGAAGGTGTTTACA...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS GCA 90 bp | GCTCTCTCATCCAGGAATTGTAAACTTCTTTGCACATGTAGAAGGTaGCTGTCAGGTTGGTTTCTATCACAGCATGCCATCCCTTCGCAG | + |
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Preference number: 5 (lower is better) Translates to: ALSSRNCKLLCTCRR*LSGWFLSQHAIPSQ Trigger: CTGCGAAGGGATGGCATGCTGTGATAGAAACCAACCTGACAGGCACCTTCTACATGTGCAAAGAAGTTTACAATTCCTGGATGAGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTGATTCCTTTATCCTCTaGACAATAGAAAGGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SRKHSQGAKARRNKMGGCDSFIL*TIERSP Trigger: TGGGGACCTTTCTATTGTCAAGAGGATAAAGGAATC...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS GCA 90 bp | CAATCGACCCTCCGTGCTCTCTCATCCAGGAATTGTAAACTTCTTTaGACATGTAGAAGGTGCCTGTCAGGTTGGTTTCTATCACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QSTLRALSSRNCKLL*TCRRCLSGWFLSQH Trigger: ATGCTGTGATAGAAACCAACCTGACAGGCACCTTCTACATGTGCAAAGAAGTTTACAATTCCTGGATGAGAGAGCACGGAGGGTCGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | AGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAGGAACAAGATGGGTGGCTGTTTAGCTAAGGTAGATTaGACCAGATTACTCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRKHSQGAKARRNKMGGCLAKVD*TRLLTS Trigger: AGAGGTGAGTAATCTGGTCAAATCTACCTTAGCTAA...ACAGCCACCCATCTTGTTCCTGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CAA 90 bp | GAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGCACGCAAGAAGGACAATGATATaGACAATCGACCCTCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: EIISSCEVGNILKALRHARRTMI*TIDPPC Trigger: GCACGGAGGGTCGATTGTCAATATCATTGTCCTTCT...TGCGTGCCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CAA 90 bp | TCAGTAAGAAACTTTCCCCATCCTACCACCGTTAGATCTAAGTTTACTCCTCAGAGAAGGACAATGATATaGACAATCGACCCTCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: SVRNFPHPTTVRSKFTPQRRTMI*TIDPPC Trigger: GCACGGAGGGTCGATTGTCAATATCATTGTCCTTCT...CTGAGGAGTAAACTTAGATCTAACGGTGGTAGGATGGGGAAAGTTTCTTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | CACACAGAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGTGGCCTCCATCCACATaGATCAACTGTCCAGTGATA | + |
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Preference number: 5 (lower is better) Translates to: HTEIISSCEVGNILKALRWPPST*INCPVI Trigger: TATCACTGGACAGTTGATCAATGTGGATGGAGGCCA...CCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTCTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CAA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTCTGTCATTATCTGGCTaGCTTGGGGCTGCTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: PTTVRSKFTPQSFEKLLILSLSG*LGAAGT Trigger: GGTTCCAGCAGCCCCAAGCAAGCCAGATAATGACAG...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | CACACAGAAATCATAAGCTCTTGTGAAGTAGGAAACATTCTCAAGGCGCTAAGGTGGCCTCCTCCATTGTaGACCAAGAAGTTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: HTEIISSCEVGNILKALRWPPPL*TKKLIL Trigger: TAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCA...CCTTAGCGCCTTGAGAATGTTTCCTACTTCACAAGAGCTTATGATTTCTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027381.13 |
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| CDS-3UTR CAA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTTGGCCTCCTCCATTGTaGACCAAGAAGTTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: PTTVRSKFTPQSFEKLLIWPPPL*TKKLIL Trigger: TAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCA...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS-3UTR CAA 90 bp | CCTACCACCGTTAGATCTAAGTTTACTCCTCAGTCATTTGAAAAGCTATTGATTTTAGCTAAGGTAGATTaGACCAGATTACTCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: PTTVRSKFTPQSFEKLLILAKVD*TRLLTS Trigger: AGAGGTGAGTAATCTGGTCAAATCTACCTTAGCTAA...AATCAATAGCTTTTCAAATGACTGAGGAGTAAACTTAGATCTAACGGTGGTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097698.5 |
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| CDS TCA 72 bp | CAGCAGCAGTTAGTCTGTCCAGCTTCCGGGAAGCAATaGCCACGTTACACCCCAGGTGCAGGAGCTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QQQLVCPASGKQ*PRYTPGAGAPG Trigger: CCCGGGAGCTCCTGCACCTGGGGTGTAACGTGGTCATTGCTTCCCGGAAGCTGGACAGACTAACTGCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 ENSMUST00000134840.8 |
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| CDS GCA 72 bp | AGCTTCCGGGAAGCAATGACCACGTTACACCCCAGGTaGAGGAGCTCCCGGGAGACGGCTTTTCCAATGCCT | + |
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Preference number: 6 (lower is better) Translates to: SFREAMTTLHPR*RSSRETAFPMP Trigger: AGGCATTGGAAAAGCCGTCTCCCGGGAGCTCCTGCACCTGGGGTGTAACGTGGTCATTGCTTCCCGGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 ENSMUST00000134840.8 |
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| CDS CAA 90 bp | AAGGTAGATTTGACCAGATTACTCACCTCTTCTTCTTTCCTGATGTaGCACTGTATGGCGGAGACTTCAGCGGAGCTGGAGGGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KVDLTRLLTSSSFLM*HCMAETSAELEGGR Trigger: TCTGCCTCCCTCCAGCTCCGCTGAAGTCTCCGCCATACAGTGCAACATCAGGAAAGAAGAAGAGGTGAGTAATCTGGTCAAATCTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CCA 72 bp | CCCTTCGCAGTGATGTCTTCCACAGGAGCCATGAACTaGCCTCCTCCATTGTTGACCAAGAAGTTGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: PFAVMSSTGAMN*PPPLLTKKLIL Trigger: TAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAGACATCACTGCGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CAA 72 bp | TTGACCAGATTACTCACCTCTTCTTCTTTCCTGATGTaGCACTGTATGGCGGAGACTTCAGCGGAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LTRLLTSSSFLM*HCMAETSAELE Trigger: CTCCAGCTCCGCTGAAGTCTCCGCCATACAGTGCAACATCAGGAAAGAAGAAGAGGTGAGTAATCTGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CAA 90 bp | GCAGTGATGTCTTCCACAGGAGCCATGAACTGGCCTCCTCCATTGTaGACCAAGAAGTTGATCTTACCATACTTAGCTAAGGTAGATTTG | + |
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Preference number: 6 (lower is better) Translates to: AVMSSTGAMNWPPPL*TKKLILPYLAKVDL Trigger: CAAATCTACCTTAGCTAAGTATGGTAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAGACATCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS GCA 72 bp | CTCCGTGCTCTCTCATCCAGGAATTGTAAACTTCTTTaGACATGTAGAAGGTGCCTGTCAGGTTGGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LRALSSRNCKLL*TCRRCLSGWFL Trigger: TAGAAACCAACCTGACAGGCACCTTCTACATGTGCAAAGAAGTTTACAATTCCTGGATGAGAGAGCACGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CAA 72 bp | TCTTCCACAGGAGCCATGAACTGGCCTCCTCCATTGTaGACCAAGAAGTTGATCTTACCATACTTAGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SSTGAMNWPPPL*TKKLILPYLAK Trigger: CTTAGCTAAGTATGGTAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGAAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CAA 90 bp | TCCACAGGAGCCATGAACTGGCCTCCTCCATTGTTGACCAAGAAGTaGATCTTACCATACTTAGCTAAGGTAGATTTGACCAGATTACTC | + |
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Preference number: 6 (lower is better) Translates to: STGAMNWPPPLLTKK*ILPYLAKVDLTRLL Trigger: GAGTAATCTGGTCAAATCTACCTTAGCTAAGTATGGTAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGCTCCTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS GCA 72 bp | TCCAGGAATTGTAAACTTCTTTGCACATGTAGAAGGTaGCTGTCAGGTTGGTTTCTATCACAGCATGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SRNCKLLCTCRR*LSGWFLSQHAI Trigger: GATGGCATGCTGTGATAGAAACCAACCTGACAGGCACCTTCTACATGTGCAAAGAAGTTTACAATTCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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| CDS CAA 72 bp | GCCATGAACTGGCCTCCTCCATTGTTGACCAAGAAGTaGATCTTACCATACTTAGCTAAGGTAGATTTGACC | + |
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Preference number: 6 (lower is better) Translates to: AMNWPPPLLTKK*ILPYLAKVDLT Trigger: GGTCAAATCTACCTTAGCTAAGTATGGTAAGATCAACTTCTTGGTCAACAATGGAGGAGGCCAGTTCATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027381.13 ENSMUST00000097698.5 |
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