RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEBP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022085

Ensembl transcript IDs: ENSMUST00000022678.5

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATGACGCACCCACAGGCCGGCTaGAAGGAGGCTCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KMPKGGSIPRPPVVDYMTHPQAG*KEAQAK
Trigger: CTTTGCTTGAGCCTCCTTGCAGCCGGCCTGTGGGTG...CGTCATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR CCA 90 bp ATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACCCTGCTGGGGGCATCTaGATCCACCATTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: IWKMPKGGSIPRPPVVDYPAGGI*IHHYQQ
Trigger: CTGCTGGTAATGGTGGATCCAGATGCCCCCAGCAGG...GTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR GCA 90 bp TATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTAAACATCCTCGTCCGCTaGCTCCAGGTTTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: YLEDAKRRFHPQTTCSGLNILVR*LQVSLL
Trigger: GAGGAGGGAAACCTGGAGGCAGCGGACGAGGATGTT...TAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR GCA 90 bp TATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTATTGACTATCGGCGCCTaGCAGGCCGTGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YLEDAKRRFHPQTTCSGLLTIGA*QAVIFC
Trigger: ACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAA...TAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR TCA 90 bp TTTATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATCGTCAAACTGAGTCATaGACTGGGTGCTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: FIWKMPKGGSIPRPPVVDRQTES*TGCLCR
Trigger: CCGACACAAGCACCCAGTTCATGACTCAGTTTGACG...ATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR TCA 90 bp AAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATGACGAGTTCCTCGTCAAACTaGGTCATGAACTGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KMPKGGSIPRPPVVDYMTSSSSN*VMNWVL
Trigger: AAGCACCCAGTTCATGACTCAGTTTGACGAGGAACT...CGTCATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR GCA 90 bp AAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATGACGCAAGCAAAGTGCTGCTaGGACCAGCTTCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KMPKGGSIPRPPVVDYMTQAKCC*DQLHCH
Trigger: ATGACAATGAAGCTGGTCGCAGCAGCACTTTGCTTG...CGTCATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR GCA 90 bp AAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATGACGCTCAGCCCATATTGCTaGAGGAATTTGTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: KMPKGGSIPRPPVVDYMTLSPYC*RNLSRF
Trigger: GAATCTGGACAAATTCCTGCAGCAATATGGGCTGAG...CGTCATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR TCA 90 bp GAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATGACGAACAATTTTACAGCTaGTGTTCCCCATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: EDAKRRFHPQTTCSGLHDEQFYS*CSPSPC
Trigger: ACATGGAGATGGGGAACATCAGCTGTAAAATTGTTC...GTCATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR TCA 90 bp TTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATTGCCTTTTCTTCCACTaGGAGAGAAATGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEDAKRRFHPQTTCSGLHCLFFH*ERNVSV
Trigger: GACAGAGACATTTCTCTCTCAGTGGAAGAAAAGGCA...ATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR CCA 90 bp TTTATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTTCTTTTGGCAGTGGTaGGAGAAAACATCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FIWKMPKGGSIPRPPVVDFFWQW*EKTSSS
Trigger: GGACGAGGATGTTTTCTCCCACCACTGCCAAAAGAA...ATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR CCA 90 bp ATTTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACGTTTCCCTTCTTCAATaGACTCAGCTGTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: IWKMPKGGSIPRPPVVDYVSLLQ*TQLSMR
Trigger: TCTCATTGACAGCTGAGTCCATTGAAGAAGGGAAAC...GTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS-3UTR GCA 90 bp TTGGAAGATGCCAAAAGGAGGTTCCATCCCCAGACCACCTGTAGTGGATTACATAAACTTCTAGGTTCCTaGATAGTGAAACATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LEDAKRRFHPQTTCSGLHKLLGS*IVKHLL
Trigger: AAGAAGATGTTTCACTATGCAGGAACCTAGAAGTTT...ATGTAATCCACTACAGGTGGTCTGGGGATGGAACCTCCTTTTGGCATCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CCA 90 bp GGATCCACCATTACCAGCAGGTACAGCGCACCATCCAAAGCCGTGTaGAACTTGACTATCGGCGCCTGCCAGGCCGTGATCTTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: GSTITSRYSAPSKAV*NLTIGACQAVIFCL
Trigger: CAGACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGGTGCGCTGTACCTGCTGGTAATGGTGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS GCA 90 bp TACAGCGCACCATCCAAAGCCGTGTGGAACTTGACTATCGGCGCCTaGCAGGCCGTGATCTTCTGTCTGTATAGATTGCACTTAGGAACA +
Preference number: 5 (lower is better)
Translates to: YSAPSKAVWNLTIGA*QAVIFCLYRLHLGT
Trigger: TGTTCCTAAGTGCAATCTATACAGACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGGTGCGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS GCA 90 bp GTCATGAACTGGGTGCTTGTGTCGGGATCTCTCAGCCCATATTGCTaGAGGAATTTGTCCAGATTCCAACCACCTAAGTCTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VMNWVLVSGSLSPYC*RNLSRFQPPKSAFS
Trigger: AGAAAAGGCAGACTTAGGTGGTTGGAATCTGGACAAATTCCTGCAGCAATATGGGCTGAGAGATCCCGACACAAGCACCCAGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS TCA 90 bp TCGTCGTTAATTCTACCAAACTCTGATGACAGTTCCTCGTCAAACTaGGTCATGAACTGGGTGCTTGTGTCGGGATCTCTCAGCCCATAT +
Preference number: 5 (lower is better)
Translates to: SSLILPNSDDSSSSN*VMNWVLVSGSLSPY
Trigger: ATATGGGCTGAGAGATCCCGACACAAGCACCCAGTTCATGACTCAGTTTGACGAGGAACTGTCATCAGAGTTTGGTAGAATTAACGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CCA 72 bp ATTACCAGCAGGTACAGCGCACCATCCAAAGCCGTGTaGAACTTGACTATCGGCGCCTGCCAGGCCGTGATC +
Preference number: 6 (lower is better)
Translates to: ITSRYSAPSKAV*NLTIGACQAVI
Trigger: GATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGGTGCGCTGTACCTGCTGGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 72 bp AGCAGGTACAGCGCACCATCCAAAGCCGTGTGGAACTaGACTATCGGCGCCTGCCAGGCCGTGATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SRYSAPSKAVWN*TIGACQAVIFC
Trigger: ACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGGTGCGCTGTACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CCA 72 bp CTCCAGGTTTCTCTCCTCCAGGTTTCCCTTCTTCAATaGACTCAGCTGTCAATGAGAGGCCCACCCACAGGC +
Preference number: 6 (lower is better)
Translates to: LQVSLLQVSLLQ*TQLSMRGPPTG
Trigger: GCCTGTGGGTGGGCCTCTCATTGACAGCTGAGTCCATTGAAGAAGGGAAACCTGGAGGAGAGAAACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CCA 72 bp GTATTTCATCACGGGGTTAGACCTGCTGGGGGCATCTaGATCCACCATTACCAGCAGGTACAGCGCACCATC +
Preference number: 6 (lower is better)
Translates to: VFHHGVRPAGGI*IHHYQQVQRTI
Trigger: GATGGTGCGCTGTACCTGCTGGTAATGGTGGATCCAGATGCCCCCAGCAGGTCTAACCCCGTGATGAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 90 bp ACCATTACCAGCAGGTACAGCGCACCATCCAAAGCCGTGTGGAACTaGACTATCGGCGCCTGCCAGGCCGTGATCTTCTGTCTGTATAGA +
Preference number: 6 (lower is better)
Translates to: TITSRYSAPSKAVWN*TIGACQAVIFCLYR
Trigger: TCTATACAGACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGGTGCGCTGTACCTGCTGGTAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS GCA 72 bp CCATCCAAAGCCGTGTGGAACTTGACTATCGGCGCCTaGCAGGCCGTGATCTTCTGTCTGTATAGATTGCAC +
Preference number: 6 (lower is better)
Translates to: PSKAVWNLTIGA*QAVIFCLYRLH
Trigger: GTGCAATCTATACAGACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAAGTTCCACACGGCTTTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS TCA 72 bp CAAACTCTGATGACAGTTCCTCGTCAAACTGAGTCATaGACTGGGTGCTTGTGTCGGGATCTCTCAGCCCAT +
Preference number: 6 (lower is better)
Translates to: QTLMTVPRQTES*TGCLCRDLSAH
Trigger: ATGGGCTGAGAGATCCCGACACAAGCACCCAGTTCATGACTCAGTTTGACGAGGAACTGTCATCAGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 72 bp CGGATACTCCCACTTTTCATGTCAGCACCTGTGATGTaGGACACCAACCAGTGTCTCCAGTATTTCATCACG +
Preference number: 6 (lower is better)
Translates to: RILPLFMSAPVM*DTNQCLQYFIT
Trigger: CGTGATGAAATACTGGAGACACTGGTTGGTGTCCAACATCACAGGTGCTGACATGAAAAGTGGGAGTATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 90 bp CCATGTAGAAAACTTCTAGGTTCCTGCATAGTGAAACATCTTCTTTaGGCAGTGGTGGGAGAAAACATCCTCGTCCGCTGCCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PCRKLLGSCIVKHLL*AVVGENILVRCLQV
Trigger: AACCTGGAGGCAGCGGACGAGGATGTTTTCTCCCACCACTGCCAAAAGAAGATGTTTCACTATGCAGGAACCTAGAAGTTTTCTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 90 bp TTGACTATCGGCGCCTGCCAGGCCGTGATCTTCTGTCTGTATAGATaGCACTTAGGAACAATTTTACAGCTGATGTTCCCCATCTCCATG +
Preference number: 6 (lower is better)
Translates to: LTIGACQAVIFCLYR*HLGTILQLMFPISM
Trigger: CATGGAGATGGGGAACATCAGCTGTAAAATTGTTCCTAAGTGCAATCTATACAGACAGAAGATCACGGCCTGGCAGGCGCCGATAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS TCA 72 bp ATTCTACCAAACTCTGATGACAGTTCCTCGTCAAACTaGGTCATGAACTGGGTGCTTGTGTCGGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: ILPNSDDSSSSN*VMNWVLVSGSL
Trigger: GAGAGATCCCGACACAAGCACCCAGTTCATGACTCAGTTTGACGAGGAACTGTCATCAGAGTTTGGTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5
CDS CAA 72 bp AAACTTCTAGGTTCCTGCATAGTGAAACATCTTCTTTaGGCAGTGGTGGGAGAAAACATCCTCGTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: KLLGSCIVKHLL*AVVGENILVRC
Trigger: GCAGCGGACGAGGATGTTTTCTCCCACCACTGCCAAAAGAAGATGTTTCACTATGCAGGAACCTAGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022678.5