RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEAK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074305

Ensembl transcript IDs: ENSMUST00000061552.15, ENSMUST00000188142.7

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGGGAGAGCCCGGGCTCCACGGGGAACAACTCTCAGTCACCCACTaGAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCA +
Preference number: 1 (lower is better)
Translates to: TGEPGLHGEQLSVTH*SHQPSCEPSSRPTA
Trigger: TGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGCAGTGGGTGACTGAGAGTTGTTCCCCGTGGAGCCCGGGCTCTCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 90 bp AAACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTaGAGCAGTGGCAGCAGGGTTGCGGCTGCCGGGTGGCTCTCTATG +
Preference number: 1 (lower is better)
Translates to: KPKLQQAGQGEGEGQ*SSGSRVAAAGWLSM
Trigger: CATAGAGAGCCACCCGGCAGCCGCAACCCTGCTGCCACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 90 bp CGGGGAACAACTCTCAGTCACCCACTGCAGCCATCAGCCTTCCTGTaGGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGAGCAACGTGC +
Preference number: 1 (lower is better)
Translates to: RGTTLSHPLQPSAFL*AELQTHCRVLGATC
Trigger: GCACGTTGCTCCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGCAGTGGGTGACTGAGAGTTGTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 90 bp CTCCAGACCCACTGCAGAGTCTTAGGAGCAACGTGCCACTCACTCTaGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGG +
Preference number: 1 (lower is better)
Translates to: LQTHCRVLGATCHSL*EAVFLEEARTPRNR
Trigger: CCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACGTTGCTCCTAAGACTCTGCAGTGGGTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 90 bp GACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTaGCTCAGACAGACACCACCAGGCCTGGCTGCCATGCGGGTAGGT +
Preference number: 1 (lower is better)
Translates to: DGRKLANYCLWGKKL*LRQTPPGLAAMRVG
Trigger: ACCTACCCGCATGGCAGCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 90 bp GACCATGGGCTATGTAAGCTGACTCAAACCCTAGCCTGCTGGGCATaGTGCAGCCATGACTCATGGCTGCCCTCTCCATGGTCATTCTGT +
Preference number: 1 (lower is better)
Translates to: DHGLCKLTQTLACWA*CSHDSWLPSPWSFC
Trigger: ACAGAATGACCATGGAGAGGGCAGCCATGAGTCATGGCTGCACCATGCCCAGCAGGCTAGGGTTTGAGTCAGCTTACATAGCCCATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 90 bp TATAACCTGTCTAGGGTCCTGCATTATGGCTCTTCTGACTTCCCTTaGGGCATTGGCTTTGGTCCATGGCGTCCCCACCTGTGCACCGCT +
Preference number: 1 (lower is better)
Translates to: YNLSRVLHYGSSDFP*GIGFGPWRPHLCTA
Trigger: AGCGGTGCACAGGTGGGGACGCCATGGACCAAAGCCAATGCCCCAAGGGAAGTCAGAAGAGCCATAATGCAGGACCCTAGACAGGTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp GGGCTATTCTCTCCATGGCTAGGTTACTATGCTAACAAGGCACTCTaGGGGACAGCGATTCTTGCTCTTGCCTGCTCTCGCCACAGTCCT +
Preference number: 1 (lower is better)
Translates to: GLFSPWLGYYANKAL*GTAILALACSRHSP
Trigger: AGGACTGTGGCGAGAGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAACCTAGCCATGGAGAGAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 90 bp GTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCTaGCATGCGGGTAGGTCTGACAGGAATCAAAGAACAGTACTTGAA +
Preference number: 1 (lower is better)
Translates to: VGEETLTQTDTTRPG*HAGRSDRNQRTVLE
Trigger: TTCAAGTACTGTTCTTTGATTCCTGTCAGACCTACCCGCATGGCAGCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR GCA 90 bp TCTTGCCTGCTCTCGCCACAGTCCTGTTTCTCTAGCACCTACATGTaGCGAGAGAGAGACTGTCCATGTGGCTTAAGGGAAAGTTCCAGT +
Preference number: 1 (lower is better)
Translates to: SCLLSPQSCFSSTYM*RERDCPCGLRESSS
Trigger: ACTGGAACTTTCCCTTAAGCCACATGGACAGTCTCTCTCTCGGCACATGTAGGTGCTAGAGAAACAGGACTGTGGCGAGAGCAGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp GTGACGTGGAGAAGGTATGTCTCAATCTGCAAGTACTGTGGAAAGTaGAGGACTGTGCCCGCTGACATGGTCAGTGGTCTTTATGCAGCC +
Preference number: 1 (lower is better)
Translates to: VTWRRYVSICKYCGK*RTVPADMVSGLYAA
Trigger: GGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTGAGACATACCTTCTCCACGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 90 bp GAAGGTATGTCTCAATCTGCAAGTACTGTGGAAAGTGAAGGACTGTaGCCGCTGACATGGTCAGTGGTCTTTATGCAGCCAGTTCAGTGC +
Preference number: 1 (lower is better)
Translates to: EGMSQSASTVESEGL*PLTWSVVFMQPVQC
Trigger: GCACTGAACTGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTGAGACATACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 90 bp CAATCTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTGACATaGTCAGTGGTCTTTATGCAGCCAGTTCAGTGCATCATTAGGCAG +
Preference number: 1 (lower is better)
Translates to: QSASTVESEGLCPLT*SVVFMQPVQCIIRQ
Trigger: CTGCCTAATGATGCACTGAACTGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 90 bp CCCCGTCATCTGAGAAGCAGCAGGATGAGGAAGGCTTGTTTTCTTTaGTATAACCTGTCTAGGGTCCTGCATTATGGCTCTTCTGACTTC +
Preference number: 1 (lower is better)
Translates to: PRHLRSSRMRKACFL*YNLSRVLHYGSSDF
Trigger: GAAGTCAGAAGAGCCATAATGCAGGACCCTAGACAGGTTATACCAAAGAAAACAAGCCTTCCTCATCCTGCTGCTTCTCAGATGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp TGTCTCAATCTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTaGCATGGTCAGTGGTCTTTATGCAGCCAGTTCAGTGCATCATTA +
Preference number: 1 (lower is better)
Translates to: CLNLQVLWKVKDCAR*HGQWSLCSQFSASL
Trigger: TAATGATGCACTGAACTGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 90 bp TACATTGAAGCCATAGGGCTGGCTCGACATTCAAGTTACCAAGAGTaGAGACACACAGACTTGCCACAAACCAACAGGCAAAGTGGATTT +
Preference number: 1 (lower is better)
Translates to: YIEAIGLARHSSYQE*RHTDLPQTNRQSGF
Trigger: AAATCCACTTTGCCTGTTGGTTTGTGGCAAGTCTGTGTGTCTGCACTCTTGGTAACTTGAATGTCGAGCCAGCCCTATGGCTTCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp AGGCTTCCTGAAGCTGTGTGGTTTAATCTTTCAACAACACTACATTaGAGCCATAGGGCTGGCTCGACATTCAAGTTACCAAGAGTGCAG +
Preference number: 1 (lower is better)
Translates to: RLPEAVWFNLSTTLH*SHRAGSTFKLPRVQ
Trigger: CTGCACTCTTGGTAACTTGAATGTCGAGCCAGCCCTATGGCTTCAATGTAGTGTTGTTGAAAGATTAAACCACACAGCTTCAGGAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 90 bp GTGCCGAGAGAGAGACTGTCCATGTGGCTTAAGGGAAAGTTCCAGTaGGGCTTAGTTGTTCAAACTCTCAACAGAAATGGAAGAATCTAT +
Preference number: 1 (lower is better)
Translates to: VPRERLSMWLKGKFQ*GLVVQTLNRNGRIY
Trigger: ATAGATTCTTCCATTTCTGTTGAGAGTTTGAACAACTAAGCCCCACTGGAACTTTCCCTTAAGCCACATGGACAGTCTCTCTCTCGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp GTCTATTTGATTGTTCATTTGCTCATCAGCTGCTGTCCTTTATGGTaGTCTTTTGCACACTACGTGGTTGCATGCATTCCCCAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: VYLIVHLLISCCPLW*SFAHYVVACIPQEL
Trigger: CAGCTCTTGGGGAATGCATGCAACCACGTAGTGTGCAAAAGATCACCATAAAGGACAGCAGCTGATGAGCAAATGAACAATCAAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 90 bp ATACACAGCAAAGTACCACAGCAAACCAAAGGGAGGCGCCACTGGTaGCACAGGGACCTGTTATTGATTCATACAATTGTAAAAATACGA +
Preference number: 1 (lower is better)
Translates to: IHSKVPQQTKGRRHW*HRDLLLIHTIVKIR
Trigger: TCGTATTTTTACAATTGTATGAATCAATAACAGGTCCCTGTGTCACCAGTGGCGCCTCCCTTTGGTTTGCTGTGGTACTTTGCTGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 90 bp GGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGAGAAATaGTCAGAGGACCACCTGATGGACTTCTTGCCTAGAGATGTAGTT +
Preference number: 1 (lower is better)
Translates to: GYDNVIWTEFRYFEK*SEDHLMDFLPRDVV
Trigger: AACTACATCTCTAGGCAAGAAGTCCATCAGGTGGTCCTCTGAGCATTTCTCAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 90 bp ATAAGGACATTATTTCTTCATATCCTGCCAACTATTCATAATCTCTaGACTATATTTCATCCTGCTGAGGCATCGGTGATACCACCTTTG +
Preference number: 1 (lower is better)
Translates to: IRTLFLHILPTIHNL*TIFHPAEASVIPPL
Trigger: CAAAGGTGGTATCACCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATATGAAGAAATAATGTCCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCCAGTGGCAGCAGGGTTaGGGCTGCCGGGTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGQWQQG*GCRVAL
Trigger: GAGAGCCACCCGGCAGCCGCAACCCTGCTGCCACTG...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACTGCTGAGGCATCGGTaGTACCACCTTTGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: RATHSGRQSFWKRLALRGLLRHR*YHLWSA
Trigger: AGCTGACCAAAGGTGGTATCACCGATGCCTCAGCAG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGAAGGTGAAGGACAGTaGAGCAGTGGCAGCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHEGEGQ*SSGSRV
Trigger: AACCCTGCTGCCACTGCTTCACTGTCCTTCACCTTC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATGGGGGAAGAAACTCTaGCTCAGACAGACACCACCA +
Preference number: 2 (lower is better)
Translates to: RATHSGRQSFWKRLALRGWGKKL*LRQTPP
Trigger: TGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAGGTGAGATCATTCCATaGGAGCTGCTCCTTCATGGC +
Preference number: 2 (lower is better)
Translates to: RATHSGRQSFWKRLALRGGEIIP*ELLLHG
Trigger: GCCATGAAGGAGCAGCTCCCATGGAATGATCTCACC...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGTTCCCTGAGGGCCCCTaGAGAATTGCACACATAAGG +
Preference number: 2 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRFPEGP*RIAHIR
Trigger: CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAA...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATTGCTCCAAGGGAAGGTaGCTGCATGTTTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHCSKGR*LHVCAA
Trigger: AGCTGCACAAACATGCAGTCACCTTCCCTTGGAGCA...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 90 bp CACCTGTGCACCGCTGTGAGCATGAGCGGATGGACTTCGGTGCACTaGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: HLCTAVSMSGWTSVH*GLSQRSTLGLSENE
Trigger: CTCATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGTCCATCCGCTCATGCTCACAGCGGTGCACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CCATGGCGTCCCCACCTGTGCACCGCTGTGAGCATGAGCGGATGGACTTCGGTGTTGGGATTTCAAGGGTaGAGTAAACAGAGACTCACA +
Preference number: 2 (lower is better)
Translates to: PWRPHLCTAVSMSGWTSVLGFQG*SKQRLT
Trigger: TGTGAGTCTCTGTTTACTTCACCCTTGAAATCCCAA...CACCGAAGTCCATCCGCTCATGCTCACAGCGGTGCACAGGTGGGGACGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGGGCCACCACAAGAAGTaGATGATAAACCCAAACTTC +
Preference number: 2 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQGHHKK*MINPNF
Trigger: GAAGTTTGGGTTTATCATTCACTTCTTGTGGTGGCC...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGCCAAGGGAAGGTGACTaGATGTTTGTGCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVPREGD*MFVQLN
Trigger: GTTCAGCTGCACAAACATGCAGTCACCTTCCCTTGG...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGGGTGACCTTGCTGAATaGAGCCCATGTCCCTGGACA +
Preference number: 2 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMGDLAE*SPCPWT
Trigger: TGTCCAGGGACATGGGCTCCATTCAGCAAGGTCACC...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGGAGCTGCTCCTTCATaGCTGTGCATTTTTCACTTT +
Preference number: 2 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHGAAPS*LCIFHF
Trigger: AAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACCTGCTGAGGCATCGGTaGTACCACCTTTGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDLLRHR*YHLWSA
Trigger: AGCTGACCAAAGGTGGTATCACCGATGCCTCAGCAG...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp CCTTCTTCCCTGCCCTCATTCTGTGGCCATCCCCCAGACAGAATTAACTCCTGTTACCCCACTGTAGGTTaGTTTCCCAGAAGCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PSSLPSFCGHPPDRINSCYPTVG*FPRSLA
Trigger: AGCTAGGCTTCTGGGAAAGCAACCTACAGTGGGGTA...ACAGGAGTTAATTCTGTCTGGGGGATGGCCACAGAATGAGGGCAGGGAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATGGACACCTTCTTCCCTaGCCTCATTCTGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENGHLLP*PHSVAI
Trigger: GATGGCCACAGAATGAGGGCAGGGAAGAAGGTGTCC...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGTCCCTGGACAAGGGTaGCAGTTGGCTTCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: LTEGSWPITACGGRNSDSVPGQG*QLASFL
Trigger: AAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGAC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CCATGGCGTCCCCACCTGTGCACCGCTGTGAGCATGAGCGGATGGACTTCGGTGTCTTTTCCTATTAGCTaGTTTTCATCTTTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: PWRPHLCTAVSMSGWTSVSFPIS*FSSLSF
Trigger: GAAGGACAAAGATGAAAACCAGCTAATAGGAAAAGA...CACCGAAGTCCATCCGCTCATGCTCACAGCGGTGCACAGGTGGGGACGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CAA 90 bp GTGACCTTGCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTaGGCTTCTTTCCTTTCCTTAAATTCTGAGTGGATACCAGGACAG +
Preference number: 2 (lower is better)
Translates to: VTLLNGAHVPGQGWQ*ASFLSLNSEWIPGQ
Trigger: CTGTCCTGGTATCCACTCAGAATTTAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGCAAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 90 bp GAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTaGCTCCTAGAGGCATGGCTTCCCAGAGCTTTAGAGTCCCATCTT +
Preference number: 2 (lower is better)
Translates to: EWASRLCMGILMAEA*LLEAWLPRALESHL
Trigger: AAGATGGGACTCTAAAGCTCTGGGAAGCCATGCCTCTAGGAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCGCTAACAAGGCACTCTaGGGGACAGCGATTCTTGCT +
Preference number: 2 (lower is better)
Translates to: TEWASRLCMGILMAEALLANKAL*GTAILA
Trigger: AGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGC...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTTCATTCCATGGGAGCTaGTCCTTCATGGCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: DGDAKRITISLRAVADSISFHGS*SFMAVH
Trigger: ATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGA...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGTCCTTAAATTCTGAGTaGATACCAGGACAGGGACAT +
Preference number: 2 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGSLNSE*IPGQGH
Trigger: ATGTCCCTGTCCTGGTATCCACTCAGAATTTAAGGA...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACGTCCCTGGACAAGGGTaGCAGTTGGCTTCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHVPGQG*QLASFL
Trigger: AAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGAC...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp TCTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTGACATGGTCAGTGGTCGTACATACACACAGGTaGAAAGGACACTCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: SASTVESEGLCPLTWSVVVHTHR*KGHSPL
Trigger: AAGAGGCGAGTGTCCTTTCCACCTGTGTGTATGTAC...GACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GTTACTATGCTAACAAGGCACTCTGAGGGACAGCGATTCTTGCTCTTGCCTGCTCTGTGCCCGCTGACATaGTCAGTGGTCTTTATGCAG +
Preference number: 2 (lower is better)
Translates to: VTMLTRHSEGQRFLLLPALCPLT*SVVFMQ
Trigger: CTGCATAAAGACCACTGACCATGTCAGCGGGCACAG...AGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTCCTTTCCTTAAATTCTaGGTGGATACCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: DGDAKRITISLRAVADSIPFLKF*VDTRTG
Trigger: CCCTGTCCTGGTATCCACTCAGAATTTAAGGAAAGG...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCATAGTGAGAGTCACGTaGAGGGAGGATGCTCAGCTT +
Preference number: 2 (lower is better)
Translates to: TEWASRLCMGILMAEALLIVRVT*REDAQL
Trigger: AAGCTGAGCATCCTCCCTCCACGTGACTCTCACTAT...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCGACATGAGGGTAACATaGGGAAGGTGGAGATATTTA +
Preference number: 2 (lower is better)
Translates to: PITACGGRNSDSDRHHQADMRVT*GRWRYL
Trigger: TAAATATCTCCACCTTCCTCATGTTACCCTCATGTC...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTACCAAGGGAAGGTGACTaGATGTTTGTGCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLPREGD*MFVQLN
Trigger: GTTCAGCTGCACAAACATGCAGTCACCTTCCCTTGG...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 90 bp GGGCTGGCTCGACATTCAAGTTACCAAGAGTGCAGACACACAGACTaGCCACAAACCAACAGGCAAAGTGGATTTTCTGTACCACAACAA +
Preference number: 2 (lower is better)
Translates to: GLARHSSYQECRHTD*PQTNRQSGFSVPQQ
Trigger: TTGTTGTGGTACAGAAAATCCACTTTGCCTGTTGGTTTGTGGCAAGTCTGTGTGTCTGCACTCTTGGTAACTTGAATGTCGAGCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTAGACATGAGGGTAACATaGGGAAGGTGGAGATATTTA +
Preference number: 2 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLDMRVT*GRWRYL
Trigger: TAAATATCTCCACCTTCCTCATGTTACCCTCATGTC...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTAGTGAGACTATTGGGATaGCAAATGCTCCAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLVRLLG*QMLQGK
Trigger: CTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCAC...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACGGCCACCACAAGAAGTaGATGATAAACCCAAACTTC +
Preference number: 2 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHGHHKK*MINPNF
Trigger: GAAGTTTGGGTTTATCATTCACTTCTTGTGGTGGCC...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp CAACTCGGCGCTGGTGGACCAGGGCTTTCTGGGTTTTCTTCACTGGCAAGGTATAATAAAACAAGCACATaGGTGTACATACACACAGGT +
Preference number: 2 (lower is better)
Translates to: QLGAGGPGLSGFSSLARYNKTST*VYIHTG
Trigger: ACCTGTGTGTATGTACACTCATGTGCTTGTTTTATT...ATACCTTGCCAGTGAAGAAAACCCAGAAAGCCCTGGTCCACCAGCGCCGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCCCTTTCCTTAAATTCTaGGTGGATACCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPPFLKF*VDTRTG
Trigger: CCCTGTCCTGGTATCCACTCAGAATTTAAGGAAAGG...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GTTACTATGCTAACAAGGCACTCTGAGGGACAGCGATTCTTGCTCTTGCCTGCTGTGAGTGAATCTAAATaGAAACGTGCAGTGGCTATG +
Preference number: 2 (lower is better)
Translates to: VTMLTRHSEGQRFLLLPAVSESK*KRAVAM
Trigger: CATAGCCACTGCACGTTTCCATTTAGATTCACTCAC...AGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR GCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAGCTCCTTCATGGCTGTaGATTTTTCACTTTTTACCC +
Preference number: 2 (lower is better)
Translates to: SRERGGHFKGEESAVRALAPSWL*IFHFLP
Trigger: GGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGC...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTATCCTTAAATTCTGAGTaGATACCAGGACAGGGACAT +
Preference number: 2 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLSLNSE*IPGQGH
Trigger: ATGTCCCTGTCCTGGTATCCACTCAGAATTTAAGGA...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGAGAAATGCTCAGGGGAGGCAGTCTTTCTaGAAGAGGCTCGCACTCCGA +
Preference number: 2 (lower is better)
Translates to: VAMTMLYGLNFVILRNAQGRQSF*KRLALR
Trigger: TCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCC...CTGAGCATTTCTCAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CAA 90 bp TACCAGCTAATATTTGCTGATTTCCCAATACTGGATAAATCAAACTaGGAAAGCTTGCATGACCCACTACTGAGTGGGCTTCAAGATTGT +
Preference number: 2 (lower is better)
Translates to: YQLIFADFPILDKSN*ESLHDPLLSGLQDC
Trigger: ACAATCTTGAAGCCCACTCAGTAGTGGGTCATGCAAGCTTTCCAAGTTTGATTTATCCAGTATTGGGAAATCAGCAAATATTAGCTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR TCA 90 bp GTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGAGAAATGCTCAGGTGAGACTATTGGGATaGCAAATGCTCCAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: VAMTMLYGLNFVILRNAQVRLLG*QMLQGK
Trigger: CTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCAC...CTGAGCATTTCTCAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CCA 90 bp GTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGAGAAATGCTCAGCATTCAAGTGACTCTTaGGATTTCAAGGGTGAAGTA +
Preference number: 2 (lower is better)
Translates to: VAMTMLYGLNFVILRNAQHSSDS*DFKGEV
Trigger: TACTTCACCCTTGAAATCCCAAGAGTCACTTGAATG...CTGAGCATTTCTCAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp CCCGGGCTCCACGGGGAACAACTCTCAGTCACCCACTaGAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PGLHGEQLSVTH*SHQPSCEPSSR
Trigger: TCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGCAGTGGGTGACTGAGAGTTGTTCCCCGTGGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR-3UTR CAA 90 bp CCATGGCGTCCCCACCTGTGCACCGCTGTGAGCATGAGCGGATGGACTTCGGTGCTTGAGGGTTTCTCCTaGGCCCTCAGCACCAGCGGT +
Preference number: 3 (lower is better)
Translates to: PWRPHLCTAVSMSGWTSVLEGFS*ALSTSG
Trigger: ACCGCTGGTGCTGAGGGCCAAGGAGAAACCCTCAAG...CACCGAAGTCCATCCGCTCATGCTCACAGCGGTGCACAGGTGGGGACGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp AGGCTCGCACTCCGAGGAACAGGTCAGCCATCTTCGTaGCCTTTCCCATTCCCCTTGTCTTCCGGCCATTCC +
Preference number: 3 (lower is better)
Translates to: RLALRGTGQPSS*PFPFPLSSGHS
Trigger: GGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACGAAGATGGCTGACCTGTTCCTCGGAGTGCGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 72 bp ACTCTCAGTCACCCACTGCAGCCATCAGCCTTCCTGTaGGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGA +
Preference number: 3 (lower is better)
Translates to: TLSHPLQPSAFL*AELQTHCRVLG
Trigger: TCCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGCAGTGGGTGACTGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 72 bp CACTGCAGAGTCTTAGGAGCAACGTGCCACTCACTCTaGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCG +
Preference number: 3 (lower is better)
Translates to: HCRVLGATCHSL*EAVFLEEARTP
Trigger: CGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACGTTGCTCCTAAGACTCTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 72 bp ACCCTAGCCTGCTGGGCATGGTGCAGCCATGACTCATaGCTGCCCTCTCCATGGTCATTCTGTGTAGGAGAC +
Preference number: 3 (lower is better)
Translates to: TLACWAWCSHDS*LPSPWSFCVGD
Trigger: GTCTCCTACACAGAATGACCATGGAGAGGGCAGCCATGAGTCATGGCTGCACCATGCCCAGCAGGCTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp GACGCTCAGAATGCAGACCCCTGTGGCCCATCTGCATaGGCAAAACGTCCAGTGGCAGCTGATGCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: DAQNADPCGPSA*AKRPVAADAEV
Trigger: GACTTCTGCATCAGCTGCCACTGGACGTTTTGCCCATGCAGATGGGCCACAGGGGTCTGCATTCTGAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GAGCTCCAGACCCACTGCAGAGTCTTAGGAGCAACGTaGCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: ELQTHCRVLGAT*HSLWEAVFLEE
Trigger: CTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACGTTGCTCCTAAGACTCTGCAGTGGGTCTGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR GCA 72 bp CCAGTCCATGTCCTGAGAACAACCCCTGAAGCCCTCTaGTATCCGTGTGCCTTCCAATCTAACTCGGCCCTG +
Preference number: 3 (lower is better)
Translates to: PVHVLRTTPEAL*YPCAFQSNSAL
Trigger: CAGGGCCGAGTTAGATTGGAAGGCACACGGATAGCAGAGGGCTTCAGGGGTTGTTCTCAGGACATGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp CTATGTAAGCTGACTCAAACCCTAGCCTGCTGGGCATaGTGCAGCCATGACTCATGGCTGCCCTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: LCKLTQTLACWA*CSHDSWLPSPW
Trigger: CCATGGAGAGGGCAGCCATGAGTCATGGCTGCACCATGCCCAGCAGGCTAGGGTTTGAGTCAGCTTACATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp CATGGGCTATGTAAGCTGACTCAAACCCTAGCCTGCTaGGCATGGTGCAGCCATGACTCATGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: HGLCKLTQTLAC*AWCSHDSWLPS
Trigger: AGAGGGCAGCCATGAGTCATGGCTGCACCATGCCCAGCAGGCTAGGGTTTGAGTCAGCTTACATAGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp TCTAGGGTCCTGCATTATGGCTCTTCTGACTTCCCTTaGGGCATTGGCTTTGGTCCATGGCGTCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: SRVLHYGSSDFP*GIGFGPWRPHL
Trigger: CAGGTGGGGACGCCATGGACCAAAGCCAATGCCCCAAGGGAAGTCAGAAGAGCCATAATGCAGGACCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp AAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTaGCTCAGACAGACACCACCAGGCCTGGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: KLANYCLWGKKL*LRQTPPGLAAM
Trigger: CATGGCAGCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 72 bp GGAATGTATAAAGGACGCTCAGAATGCAGACCCCTGTaGCCCATCTGCATGGGCAAAACGTCCAGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: GMYKGRSECRPL*PICMGKTSSGS
Trigger: GCTGCCACTGGACGTTTTGCCCATGCAGATGGGCCACAGGGGTCTGCATTCTGAGCGTCCTTTATACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp GTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTaGGGCTTTGCTCCTAGAGGCATGGCTTCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VGFKIVHGDFDG*GFAPRGMASQS
Trigger: GCTCTGGGAAGCCATGCCTCTAGGAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp TCCATGGTCATTCTGTGTAGGAGACACAAGACACTGTaGGCCAACCAGCTCTCTTTCCTGGGAGTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: SMVILCRRHKTL*ANQLSFLGVQS
Trigger: GCTCTGGACTCCCAGGAAAGAGAGCTGGTTGGCCCACAGTGTCTTGTGTCTCCTACACAGAATGACCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CAA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGGGACAAGGGTGGCAGTaGGCTTCTTTCCTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVGQGWQ*ASFLSL
Trigger: TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCC...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 72 bp TCTCCATGGCTAGGTTACTATGCTAACAAGGCACTCTaGGGGACAGCGATTCTTGCTCTTGCCTGCTCTCGC +
Preference number: 3 (lower is better)
Translates to: SPWLGYYANKAL*GTAILALACSR
Trigger: GCGAGAGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAACCTAGCCATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp CGTGTGCCTTCCAATCTAACTCGGCCCTGGGGTTGGTaGTTTTCAGGAACTTCATGGCCTACTCCACATGTC +
Preference number: 3 (lower is better)
Translates to: RVPSNLTRPWGW*FSGTSWPTPHV
Trigger: GACATGTGGAGTAGGCCATGAAGTTCCTGAAAATCACCAACCCCAGGGCCGAGTTAGATTGGAAGGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp CTCTCGCCACAGTCCTGTTTCTCTAGCACCTACATGTaGCGAGAGAGAGACTGTCCATGTGGCTTAAGGGAA +
Preference number: 3 (lower is better)
Translates to: LSPQSCFSSTYM*RERDCPCGLRE
Trigger: TTCCCTTAAGCCACATGGACAGTCTCTCTCTCGGCACATGTAGGTGCTAGAGAAACAGGACTGTGGCGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp CTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTaGCATGGTCAGTGGTCTTTATGCAGCCAGTTCAGT +
Preference number: 3 (lower is better)
Translates to: LQVLWKVKDCAR*HGQWSLCSQFS
Trigger: ACTGAACTGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GGTTGCTTTCCCAGAAGCCTAGCTCCAGCATGTGCATaGAACATGGTTGGTTCCACACGCATACTCACTTAC +
Preference number: 3 (lower is better)
Translates to: GCFPRSLAPACA*NMVGSTRILTY
Trigger: GTAAGTGAGTATGCGTGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGAAAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GAGAGTCACGTGGAGGGAGGATGCTCAGCTTACCAATaGAGTGAGACAATGGTAGCAGAAGTGTGCACACTT +
Preference number: 3 (lower is better)
Translates to: ESHVEGGCSAYQ*SETMVAEVCTL
Trigger: AAGTGTGCACACTTCTGCTACCATTGTCTCACTGCATTGGTAAGCTGAGCATCCTCCCTCCACGTGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GCCATAGGGCTGGCTCGACATTCAAGTTACCAAGAGTaGAGACACACAGACTTGCCACAAACCAACAGGCAA +
Preference number: 3 (lower is better)
Translates to: AIGLARHSSYQE*RHTDLPQTNRQ
Trigger: TTGCCTGTTGGTTTGTGGCAAGTCTGTGTGTCTGCACTCTTGGTAACTTGAATGTCGAGCCAGCCCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp CACAAAATCAGTCTTGGCTTTAAGACAACTCGGCGCTaGTGGACCAGGGCTTTCTGGGTTTTCTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: HKISLGFKTTRR*WTRAFWVFFTG
Trigger: GCCAGTGAAGAAAACCCAGAAAGCCCTGGTCCACCAGCGCCGAGTTGTCTTAAAGCCAAGACTGATTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp AGTACTGTGGAAAGTGAAGGACTGTGCCCGCTGACATaGTCAGTGGTCTTTATGCAGCCAGTTCAGTGCATC +
Preference number: 3 (lower is better)
Translates to: STVESEGLCPLT*SVVFMQPVQCI
Trigger: GATGCACTGAACTGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GGTATACAAAATGGATCTGTCTACCCCACTGTAGGTTaGTTTCCCAGAAGCCTAGCTCCAGCATGTGCATGC +
Preference number: 3 (lower is better)
Translates to: GIQNGSVYPTVG*FPRSLAPACAC
Trigger: GCATGCACATGCTGGAGCTAGGCTTCTGGGAAAGCAACCTACAGTGGGGTAGACAGATCCATTTTGTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp TCTCAATCTGCAAGTACTGTGGAAAGTGAAGGACTGTaGCCGCTGACATGGTCAGTGGTCTTTATGCAGCCA +
Preference number: 3 (lower is better)
Translates to: SQSASTVESEGL*PLTWSVVFMQP
Trigger: TGGCTGCATAAAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp AGAAGGTATGTCTCAATCTGCAAGTACTGTGGAAAGTaGAGGACTGTGCCCGCTGACATGGTCAGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: RRYVSICKYCGK*RTVPADMVSGL
Trigger: AAGACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGATTGAGACATACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp AGACTAGTTAATACCGGCTTACTGACGGAAGGAAGCTaGCCAATTACTGCTTGTGGGGGAAGAAACTCTGAC +
Preference number: 3 (lower is better)
Translates to: RLVNTGLLTEGS*PITACGGRNSD
Trigger: GTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAGTAAGCCGGTATTAACTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CCA 72 bp TCAGATTTACATGGGCAAGGCACCATGAGCGTGACGTaGAGAAGGTATGTCTCAATCTGCAAGTACTGTGGA +
Preference number: 3 (lower is better)
Translates to: SDLHGQGTMSVT*RRYVSICKYCG
Trigger: TCCACAGTACTTGCAGATTGAGACATACCTTCTCCACGTCACGCTCATGGTGCCTTGCCCATGTAAATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CAA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAATCAAAGAACAGTACTaGAAAGTCTGTTCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: LTEGSWPITACGGRNSDSIKEQY*KVCSLR
Trigger: CCTCAGGGAACAGACTTTCAAGTACTGTTCTTTGAT...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR GCA 72 bp CCAAGGGAAGGTGACTGCATGTTTGTGCAGCTGAACTaGTGTACAGTAAAGAAACACTCAGCCATTCACTGT +
Preference number: 3 (lower is better)
Translates to: PREGDCMFVQLN*CTVKKHSAIHC
Trigger: ACAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATGCAGTCACCTTCCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR GCA 72 bp GGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTaGTCCTTCATGGCTGTGCATTTTTCACTTTTTACC +
Preference number: 3 (lower is better)
Translates to: GVCSLVRSFHGS*SFMAVHFSLFT
Trigger: GGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR GCA 72 bp TTTGCTCATCAGCTGCTGTCCTTTATGGTGATCTTTTaGACACTACGTGGTTGCATGCATTCCCCAAGAGCT +
Preference number: 3 (lower is better)
Translates to: FAHQLLSFMVIF*TLRGCMHSPRA
Trigger: AGCTCTTGGGGAATGCATGCAACCACGTAGTGTGCAAAAGATCACCATAAAGGACAGCAGCTGATGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp CTGAGAAGCAGCAGGATGAGGAAGGCTTGTTTTCTTTaGTATAACCTGTCTAGGGTCCTGCATTATGGCTCT +
Preference number: 3 (lower is better)
Translates to: LRSSRMRKACFL*YNLSRVLHYGS
Trigger: AGAGCCATAATGCAGGACCCTAGACAGGTTATACCAAAGAAAACAAGCCTTCCTCATCCTGCTGCTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp AAAGTACCACAGCAAACCAAAGGGAGGCGCCACTGGTaGCACAGGGACCTGTTATTGATTCATACAATTGTA +
Preference number: 3 (lower is better)
Translates to: KVPQQTKGRRHW*HRDLLLIHTIV
Trigger: TACAATTGTATGAATCAATAACAGGTCCCTGTGTCACCAGTGGCGCCTCCCTTTGGTTTGCTGTGGTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp GAGAGACTGTCCATGTGGCTTAAGGGAAAGTTCCAGTaGGGCTTAGTTGTTCAAACTCTCAACAGAAATGGA +
Preference number: 3 (lower is better)
Translates to: ERLSMWLKGKFQ*GLVVQTLNRNG
Trigger: TCCATTTCTGTTGAGAGTTTGAACAACTAAGCCCCACTGGAACTTTCCCTTAAGCCACATGGACAGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp GCTCCCTACACCTTTTCTTCTGACGTACAAACGGCCTaGGTGAAACTAACTAACAGAGAACCCTTCTTTTTA +
Preference number: 3 (lower is better)
Translates to: APYTFSSDVQTA*VKLTNREPFFL
Trigger: TAAAAAGAAGGGTTCTCTGTTAGTTAGTTTCACGCAGGCCGTTTGTACGTCAGAAGAAAAGGTGTAGGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CAA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATGGACAAGGGTGGCAGTaGGCTTCTTTCCTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: ISCQLFIISGLYFILLRHGQGWQ*ASFLSL
Trigger: TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCC...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 72 bp TTCACTTTTTACCCCACATTTGTGAGACTATTGGGATaGCAAATGCTCCAAGGGAAGGTGACTGCATGTTTG +
Preference number: 3 (lower is better)
Translates to: FTFYPTFVRLLG*QMLQGKVTACL
Trigger: CAAACATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTGGGGTAAAAAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 72 bp GAAGCTGTGTGGTTTAATCTTTCAACAACACTACATTaGAGCCATAGGGCTGGCTCGACATTCAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: EAVWFNLSTTLH*SHRAGSTFKLP
Trigger: TGGTAACTTGAATGTCGAGCCAGCCCTATGGCTTCAATGTAGTGTTGTTGAAAGATTAAACCACACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR TCA 72 bp AACTGGTCAGGGATGGGAAATAAGGAAGGAACAACTTaGGTAGGCTTCCTGAAGCTGTGTGGTTTAATCTTT +
Preference number: 3 (lower is better)
Translates to: NWSGMGNKEGTT*VGFLKLCGLIF
Trigger: AAAGATTAAACCACACAGCTTCAGGAAGCCTACTCAAGTTGTTCCTTCCTTATTTCCCATCCCTGACCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp AGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTaGAGAATTGCACACATAAGGACATTATTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: RTVLESLFPEGP*RIAHIRTLFLH
Trigger: ATGAAGAAATAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR TCA 72 bp ATAAATCAAACTTGGAAAGCTTGCATGACCCACTACTaGGTGGGCTTCAAGATTGTGCATGGGGATTTTGAT +
Preference number: 3 (lower is better)
Translates to: INQTWKACMTHY*VGFKIVHGDFD
Trigger: ATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGTAGTGGGTCATGCAAGCTTTCCAAGTTTGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp ATGTTAAAAGTCTACAAGTTTCCAAGGCCACTAAGGTaGCACCCAAATAATACTGCACAAAATCAGTCTTGG +
Preference number: 3 (lower is better)
Translates to: MLKVYKFPRPLR*HPNNTAQNQSW
Trigger: CCAAGACTGATTTTGTGCAGTATTATTTGGGTGGCACCTTAGTGGCCTTGGAAACTTGTAGACTTTTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR GCA 72 bp AATGTTATATGGACTGAATTTCGTTATTTTGAGAAATaGTCAGAGGACCACCTGATGGACTTCTTGCCTAGA +
Preference number: 3 (lower is better)
Translates to: NVIWTEFRYFEK*SEDHLMDFLPR
Trigger: TCTAGGCAAGAAGTCCATCAGGTGGTCCTCTGAGCATTTCTCAAAATAACGAAATTCAGTCCATATAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR-3UTR CAA 90 bp ATATTTGCTGATTTCCCAATACTGGATAAATCAAACTTGGAAAGCTTGCATGACATCAAAGAACAGTACTaGAAAGTCTGTTCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: IFADFPILDKSNLESLHDIKEQY*KVCSLR
Trigger: CCTCAGGGAACAGACTTTCAAGTACTGTTCTTTGAT...GTCATGCAAGCTTTCCAAGTTTGATTTATCCAGTATTGGGAAATCAGCAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CCA 72 bp TTATTTCTTCATATCCTGCCAACTATTCATAATCTCTaGACTATATTTCATCCTGCTGAGGCATCGGTGATA +
Preference number: 3 (lower is better)
Translates to: LFLHILPTIHNL*TIFHPAEASVI
Trigger: TATCACCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATATGAAGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGGCGGCAGCATGTGGATaGCTGTCCCGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRAAACG*LSRPGP
Trigger: TGGGCCTGGACGGGACAGTCATCCACATGCTGCCGC...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAGGGCTTTCTGTGGTCTaGTGGGCCTCACCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGGLSVV*WASPSP
Trigger: TGGGGAAGGTGAGGCCCATCAGACCACAGAAAGCCC...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCGCAGGAGAAGGGCCCTaGGCAGCTCCCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGAGEGP*AAPPGW
Trigger: CCAACCTGGGGGAGCTGCCCAGGGCCCTTCTCCTGC...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCGGGGCAAGGCGGGACTaGTCTCGGAGGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFGARRD*SRRIWG
Trigger: CCCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCC...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATTGCACAGGCAGACTCTaGCGGACAGCCAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHCTGRL*RTARLW
Trigger: CCATAGCCTGGCTGTCCGGCAGAGTCTGCCTGTGCA...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCGTGATGGCGCTGGACTaGAGGGGGCGGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFVMALD*RGRQHV
Trigger: CACATGCTGCCGCCCCCTCCAGTCCAGCGCCATCAC...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCTTGGGGACAGTCTGTaGGCTTGCTGGGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQLGDSL*ACWGCY
Trigger: ATAGCACCCCCAGCAAGCTCACAGACTGTCCCCAAG...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCATTGGGTCGCCCCAGGTaGTCGCTGGCCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSLGRPR*SLAMAA
Trigger: GGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAA...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGGTGGGGCAAGGGTCTaGAGGAGAAGGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSGGARV*RRRALG
Trigger: GCCCAGGGCCCTTCTCCTGCAGACCCTTGCCCCACC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGCAGTGGGGGTGGTGTaGGTTGGGAAGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHAVGVV*VGKHSV
Trigger: GACTGAATGCTTCCCAACCCACACCACCCCCACTGC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGCAGGAGAAGGGCCCTaGGCAGCTCCCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSAGEGP*AAPPGW
Trigger: CCAACCTGGGGGAGCTGCCCAGGGCCCTTCTCCTGC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGTGGTCTCGGAGGATCTaGGGGTCCACCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVWSRRI*GSTRWL
Trigger: GAGCCACCTGGTGGACCCCCAGATCCTCCGAGACCA...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACAGTGTTGGTGTGACTaGAGTGCCATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGQCWCD*SAILLP
Trigger: GGGAAGCAAGATGGCACTTCAGTCACACCAACACTG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCCGAAGTCGGCCACAGTaGGATGGGGAACCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PITACGGRNSDSDRHHQARSRPQ*DGEPPW
Trigger: CCAGGGAGGTTCCCCATCTCACTGTGGCCGACTTCG...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACTTTGGCGTCAGAAATaGGGATGCGCTCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGLWRQK*GCAQKG
Trigger: ACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGCACTCTCCTCACCACTaGAGAACTCAGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRHSPHH*RTQGSR
Trigger: TCTGCTACCCTGAGTTCTCCAGTGGTGAGGAGAGTG...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGCCCAGCAGGAGTTCTTaGATCCCGAGGAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRPSRSS*IPRRKF
Trigger: GAACTTTCTCCTCGGGATCCAAGAACTCCTGCTGGG...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGGCAGTGGGGGTGGTGTaGGTTGGGAAGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGAVGVV*VGKHSV
Trigger: GACTGAATGCTTCCCAACCCACACCACCCCCACTGC...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATGGGGCAAGGCGGGACTaGTCTCGGAGGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENGARRD*SRRIWG
Trigger: CCCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCC...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGTGCTTTGGTCCACACTaGGGTGGCCTTGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVCFGPH*GGLGQG
Trigger: ACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCA...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATCAGTGTTGGTGTGACTaGAGTGCCATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHQCWCD*SAILLP
Trigger: GGGAAGCAAGATGGCACTTCAGTCACACCAACACTG...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATCTTTGGCGTCAGAAATaGGGATGCGCTCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHLWRQK*GCAQKG
Trigger: ACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAG...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCTGCTGTTGCTGCTGCTaGCTGGCACCTGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGCCCCC*LAPETL
Trigger: AAGGGTCTCAGGTGCCAGGCAGCAGCAGCAACAGCA...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGTTGGGATGCCGTGGATaGTTGGGAGGTATCATAGCT +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRLGCRG*LGGIIA
Trigger: AGCTATGATACCTCCCAAGCATCCACGGCATCCCAA...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATGCTGGATGTTAAAATaGACAGGCAGACTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGCWMLK*TGRLCR
Trigger: CCGGCAGAGTCTGCCTGTGCATTTTAACATCCAGCA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATTCAGTGCCATCCTCTaGCTTTTCAGGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGFSAIL*LFRSIR
Trigger: CCTGATGCTCCTGAAAAGGCAGAGGATGGCACTGAA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGGGAAAGGGAGGCGGTaGCTCACTCTGGGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRGKGRR*LTLGAR
Trigger: ACGAGCGCCCAGAGTGAGCCACCGCCTCCCTTTCCC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATCATTTTCTTTGGCAGTaGGGGTGGTGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHHFLWQ*GWCGLG
Trigger: TCCCAACCCACACCACCCCCACTGCCAAAGAAAATG...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATGCTGGCATCCCAGTTaGGATCAATATCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGCWHPS*DQYRRW
Trigger: CCACCTACGATATTGATCCCAACTGGGATGCCAGCA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CAACTCGGCGCTGGTGGACCAGGGCTTTCTGGGTTTTCTTCACTGGCAAGGTATTCGGCCACAGTGAGATaGGGAACCTCCCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: QLGAGGPGLSGFSSLARYSATVR*GTSLVM
Trigger: CATCACCAGGGAGGTTCCCCATCTCACTGTGGCCGA...ATACCTTGCCAGTGAAGAAAACCCAGAAAGCCCTGGTCCACCAGCGCCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTGGTCTCGGAGGATCTaGGGGTCCACCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMWSRRI*GSTRWL
Trigger: GAGCCACCTGGTGGACCCCCAGATCCTCCGAGACCA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp ACCGCTGTGAGCATGAGCGGATGGACTTCGGTGCACTaGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TAVSMSGWTSVH*GLSQRSTLGLS
Trigger: TGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGTCCATCCGCTCATGCTCACAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCGCCTTAGGGCTAGATTaGGGTGCTTCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGALGLD*GASGGV
Trigger: GACTCCTCCAGAAGCACCTCAATCTAGCCCTAAGGC...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACGCCTCTGTGAACCAGTaGTGGCGCTGGACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDASVNQ*WRWTGG
Trigger: CCCTCCAGTCCAGCGCCATCACTGGTTCACAGAGGC...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACCGAAGTCGGCCACAGTaGGATGGGGAACCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDRSRPQ*DGEPPW
Trigger: CCAGGGAGGTTCCCCATCTCACTGTGGCCGACTTCG...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCTCAGGGCTGTTCCCATaGTGGGCCAAAGAATCTCGC +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFSGLFP*WAKESR
Trigger: GCGAGATTCTTTGGCCCATCATGGGAACAGCCCTGA...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTACCGCTCCCTTGGGATaGCGTGGATGCTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DGDAKRITISLRAVADSITAPLG*RGCLGG
Trigger: ACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGT...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATTGCTGGATGTTAAAATaGACAGGCAGACTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHCWMLK*TGRLCR
Trigger: CCGGCAGAGTCTGCCTGTGCATTTTAACATCCAGCA...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGCCCCAGCCTTGCTTTaGTCCACACTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSAPALL*STLRWP
Trigger: AGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCCCTTTCCAGGTCAGGTaGAGGCAGTGTTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGPFQVR*RQCWCD
Trigger: GTCACACCAACACTGCCTCCACCTGACCTGGAAAGG...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCGGGGGTGGTGTGGGTTaGGAAGCATTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGGGGVG*EAFSPS
Trigger: AGAAGGACTGAATGCTTCCCAACCCACACCACCCCC...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGGTTCTCTTTCTGGGATaGCTCTGTTTCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQVLFLG*LCFRAG
Trigger: CCCTGCTCTGAAACAGAGCCATCCCAGAAAGAGAAC...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACGTTGGTTCTCTTTCTaGGATGGCTCTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGRWFSF*DGSVSE
Trigger: CTCTGAAACAGAGCCATCCCAGAAAGAGAACCAACG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGRWLLL*LALVFP
Trigger: TGGGAAAACTAATGCCAATCACAGTAACAACCACCG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCAGTTGCCCGTGCTCCTaGCTCGGTGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: PITACGGRNSDSDRHHQASCPCS*LGGCYC
Trigger: ACAGTAACAACCACCGAGTCAGGAGCACGGGCAACT...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGCGCTCCCGCTCAGGATaGCGTGTTTGCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRRSRSG*RVCPES
Trigger: ACTCTCAGGGCAAACACGTCATCCTGAGCGGGAGCG...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCTTGCCCGCAGGCTCTTaGGTGGGTCTCTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFLPAGS*VGLWIF
Trigger: AAAAATCCAGAGACCCACTCAAGAGCCTGCGGGCAA...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCCTGCTGCCTGGCACCTaGGACCCTTGTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPLLPGT*DPCAPS
Trigger: GGAAGGGGCACAAGGGTCTCAGGTGCCAGGCAGCAG...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp TCTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTGACATGGTCAGTGGTCTCAGGGCTGTTCCCATaGTGGGCCAAAGAATCTCGC +
Preference number: 4 (lower is better)
Translates to: SASTVESEGLCPLTWSVVSGLFP*WAKESR
Trigger: GCGAGATTCTTTGGCCCATCATGGGAACAGCCCTGA...GACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCTTTGTCGTGGACTGGTaGTGGACGTCCACACTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGFVVDW*WTSTLP
Trigger: AGGAAGTGTGGACGTCCAGCACCAGTCCACGACAAA...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACGTGCCCCTTCCGTTTTaGCCGCAGGCTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHVPLPF*PQALEW
Trigger: CCACTCAAGAGCCTGCGGGCAAAACGGAAGGGGCAC...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGTCTGGGATAAACTGCTaGCTGTTTCAGAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQSGINC*LFQSVT
Trigger: AGTCACGCTCTGAAACAGCCAGCAGTTTATCCCAGA...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGCCATTACAGACCTTCTaGGATAAACTGCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRPLQTF*DKLLAV
Trigger: AACAGCCAGCAGTTTATCCCAGAAGGTCTGTAATGG...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTCCTTTCCAGGTCAGGTaGAGGCAGTGTTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSPFQVR*RQCWCD
Trigger: GTCACACCAACACTGCCTCCACCTGACCTGGAAAGG...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCTCTCTCCAAAGGCAATaGCATCATCCACCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGSLQRQ*HHPPLP
Trigger: AGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGA...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGAGAGACCACGTCGACTaGAGAGTGACTCCATACTGT +
Preference number: 4 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGRDHVD*RVTPYC
Trigger: ACAGTATGGAGTCACTCTCCAGTCGACGTGGTCTCT...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCCCCCAGAGCAGACATTaGAGGATGCCTTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PITACGGRNSDSDRHHQAPQSRH*RMPLAS
Trigger: TGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGG...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGGACGAGGCTTATGGTaGCTGCCTGGCCAGCGATAT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRGRGLW*LPGQRY
Trigger: ATATCGCTGGCCAGGCAGTCACCATAAGCCTCGTCC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp TCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACACGCATTGTCGCTGGTTAGCCTaGAGTCTGACCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SQKPSSSMCMQHGWFHTHCRWLA*SLTSCL
Trigger: TAGACAGCTGGTCAGACTTCAGGCTAACCAGCGACA...ATGCGTGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGGCAGCATCTCATAGATaGGAATGCCCGTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGAASHR*ECPSGI
Trigger: AATTCCAGACGGGCATTCTCATCTATGAGATGCTGC...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTCACGCTTTGCCCATCTaGCACCATCATAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSHALPI*HHHSGL
Trigger: AAGCCCACTATGATGGTGGCAGATGGGCAAAGCGTG...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCCTTCCTCATCTGTTTTaGGGCGGCGGAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGLPHLF*GGGRSF
Trigger: AAAGCTTCTTCCGCCGCCGCAAAACAGATGAGGAAG...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCAGGAGAAAGTTCTCCTaGCACTTCATGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFRRKFS*HFMGHT
Trigger: CGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCT...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACACGCATCGGAGTTGGTCTTTCTaGCCAGCCATGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKPSSSMCMQHGWFHTHRSWSF*PAMKRS
Trigger: AGACCTCTTCATGGCTGGGCAGAAAGACCAACTCCG...ATGCGTGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGGACGTCCACACTTCCTaGTATCGGATTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVDVHTS*YRIALD
Trigger: ATCCAGTGCAATCCGATACCAGGAAGTGTGGACGTC...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACTGTAGCTTCTTTGTaGAGAAGACTGACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGTVASL*RRLTSV
Trigger: AACAGAGGTCAGTCTTCTCCACAAAGAAGCTACAGT...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCACTGGCTTCGTGGATaGATCTTTCTGAATTTTGGC +
Preference number: 4 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQHWLRG*IFLNFG
Trigger: GCCAAAATTCAGAAAGATCCATCCACGAAGCCAGTG...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGTGGCCACAATCCTGCTaGATGTTAAAATGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGWPQSC*MLKCTG
Trigger: GCCTGTGCATTTTAACATCCAGCAGGATTGTGGCCA...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAGCAGCTCCCCCAGGTTaGTGCTGGACAAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALAAPPG*CWTSSK
Trigger: CTTGCTGCTTGTCCAGCACCAACCTGGGGGAGCTGC...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCGGTGGCTCTTCTGCTTaGCCTGAGAGAAGTTACTCA +
Preference number: 4 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGGGSSA*PERSYS
Trigger: TGAGTAACTTCTCTCAGGCCAAGCAGAAGAGCCACC...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGCCCCAGAGCAGACATTaGAGGATGCCTTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMPQSRH*RMPLAS
Trigger: TGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGG...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp GTGAGCATGAGCGGATGGACTTCGGTGCACTTGGGTTaGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: VSMSGWTSVHLG*SQRSTLGLSEN
Trigger: ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGTCCATCCGCTCATGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACGGTTCCACCCCAGGATaGCAGGCTTGTTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDGSTPG*QACSHS
Trigger: ACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACC...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTTATTGGCACACTGCTaGGGATCACTGCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PITACGGRNSDSDRHHQALLAHC*GSLPKP
Trigger: AGGCTTTGGCAGTGATCCTCAGCAGTGTGCCAATAA...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCTTCAAGGCATCTGTATaGAGGCTTCGGAGTTTACCC +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFFKASV*RLRSLP
Trigger: GGGTAAACTCCGAAGCCTTCATACAGATGCCTTGAA...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTTAGCAAAGCGAGGCTaGCCTCTCATGCGAATCTCC +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMLAKRG*PLMRIS
Trigger: GGAGATTCGCATGAGAGGGCAGCCTCGCTTTGCTAA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGGTCTTCACATTTAACTaGCAGTCTCTTCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQVFTFN*QSLQGI
Trigger: GATGCCTTGAAGAGACTGGCAGTTAAATGTGAAGAC...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACACGCATCTTCGCTGTCTTCAGTaGCATCCTCTGCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SQKPSSSMCMQHGWFHTHLRCLQ*HPLPFQ
Trigger: CTGAAAAGGCAGAGGATGGCACTGAAGACAGCGAAG...ATGCGTGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACACGCATAGCAGCAGACACACTTaGCTCTCATACAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SQKPSSSMCMQHGWFHTHSSRHT*LSYKSG
Trigger: CCCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCT...ATGCGTGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGCCCGTTGTTGTTATTaGATATCTTCTGTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHARCCY*ISSVHC
Trigger: ACAGTGCACAGAAGATATCCAATAACAACAACGGGC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCGGTGCTCGCTGGCCATaGCTGCCGACACATCCACAA +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPGARWP*LPTHPQ
Trigger: TTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACC...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTTCTTTTGTCGTGGACTaGTGCTGGACGTCCACACTT +
Preference number: 4 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSSFVVD*CWTSTL
Trigger: AAGTGTGGACGTCCAGCACCAGTCCACGACAAAAGA...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAAGGGATCTTTTGTCGTaGACTGGTGCTGGACGTCCA +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSRDLLS*TGAGRP
Trigger: TGGACGTCCAGCACCAGTCCACGACAAAAGATCCCT...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCGGGAGGAGAAGTCACTaGCTTCGTGGATGGATCTTT +
Preference number: 4 (lower is better)
Translates to: PITACGGRNSDSDRHHQAGRRSH*LRGWIF
Trigger: AAAGATCCATCCACGAAGCCAGTGACTTCTCCTCCC...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAGGCGGTGGCTCACTCTaGGCGCTCGTCACTAATTTG +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALGGGSL*ALVTNL
Trigger: CAAATTAGTGACGAGCGCCCAGAGTGAGCCACCGCC...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCACCCAGCAGGAGTTCTTaGATCCCGAGGAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSPSRSS*IPRRKF
Trigger: GAACTTTCTCCTCGGGATCCAAGAACTCCTGCTGGG...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTGTTTGTGACTCGTTaGTTCTCTTTCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFLFVTR*FSFWDG
Trigger: GCCATCCCAGAAAGAGAACCAACGAGTCACAAACAG...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGGCAGCTCCCCCAGGTTaGTGCTGGACAAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMAAPPG*CWTSSK
Trigger: CTTGCTGCTTGTCCAGCACCAACCTGGGGGAGCTGC...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTACTTTCCATGGCTTTCTaGAGGTCTTTGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLLSMAF*RSLEMG
Trigger: GCCCATCTCCAAAGACCTTCAGAAAGCCATGGAAAG...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTAGATACTGTTTGCTGCTaGAGGAACGGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLDTVCC*RNGSLL
Trigger: AAGGAGAGACCCGTTCCTTCAGCAGCAAACAGTATC...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTCTCTTCTGCTTGGCCTaGGAGAAGTTACTCACAATG +
Preference number: 4 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSLFCLA*EKLLTM
Trigger: CATTGTGAGTAACTTCTCTCAGGCCAAGCAGAAGAG...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTGAGGTGGTGAAGATTTaGAAGAGATCTTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: DGDAKRITISLRAVADSIEVVKI*KRSSRG
Trigger: CCCCCGAGAAGATCTCTTTCAAATCTTCACCACCTC...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGAGGTGGTGAAGATTTaGAAGAGATCTTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSEVVKI*KRSSRG
Trigger: CCCCCGAGAAGATCTCTTTCAAATCTTCACCACCTC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAATTGGATATCTTCTGTaGACTGTCATTATTGGCACA +
Preference number: 4 (lower is better)
Translates to: RATHSGRQSFWKRLALRGIGYLL*TVIIGT
Trigger: TGTGCCAATAATGACAGTGCACAGAAGATATCCAAT...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTCATCCCAGCTCTCATaGTCCTCCTCCATGTTACTG +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMSSQLS*SSSMLL
Trigger: CAGTAACATGGAGGAGGAGCATGAGAGCTGGGATGA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTAGAGGCTGCCCTCTCATaGGAATCTCCATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLEAALS*ESPWPT
Trigger: TGTTGGCCATGGAGATTCGCATGAGAGGGCAGCCTC...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CATGTTTGTGCAGCTGAACTGCTGTACAGTAAAGAAACACTCAGCCATTCACTGCTCGCTGGCCATGGCTaGCGACACATCCACAACGGT +
Preference number: 4 (lower is better)
Translates to: HVCAAELLYSKETLSHSLLAGHG*RHIHNG
Trigger: ACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAG...CAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTACATCAGCGGCTCGCCTaGTGCCTTCAGAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALHQRLA*CLQSAK
Trigger: TTTTGCACTCTGAAGGCAGCAGGCGAGCCGCTGATG...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCATTGGGATGCCGTGGATaGTTGGGAGGTATCATAGCT +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSLGCRG*LGGIIA
Trigger: AGCTATGATACCTCCCAAGCATCCACGGCATCCCAA...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGACCGCTCCCTTGGGATaGCGTGGATGCTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRTAPLG*RGCLGG
Trigger: ACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGT...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTATTCAGTGCCATCCTCTaGCTTTTCAGGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLFSAIL*LFRSIR
Trigger: CCTGATGCTCCTGAAAAGGCAGAGGATGGCACTGAA...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTCATGCGAATCTCCATaGCCAACAGCTCTTCATCGC +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMSCESP*PTALHR
Trigger: GCGATGAAGAGCTGTTGGCCATGGAGATTCGCATGA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCGTCGTGGACTGGTGCTaGACGTCCACACTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPVVDWC*TSTLPG
Trigger: ACCAGGAAGTGTGGACGTCCAGCACCAGTCCACGAC...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGCTGGGGAGCTGTGGGTaGAACTGTAGCTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRLGSCG*NCSFFV
Trigger: CACAAAGAAGCTACAGTTCCACCCACAGCTCCCCAG...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGTTTGGGTCTGACTGGTaGGTTTTTAGGAATACTTTT +
Preference number: 4 (lower is better)
Translates to: AAISLPVSRAPDPLQSLRFGSDW*VFRNTF
Trigger: AAAAGTATTCCTAAAAACCCACCAGTCAGACCCAAA...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACTCTCTCCAAAGGCAATaGCATCATCCACCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHSLQRQ*HHPPLP
Trigger: AGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGA...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGGCATTCAGTCCTTCTTaGTCTGTCTTCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVAFSPS*SVFSPK
Trigger: CTTTGGAGAGAAGACAGACCAAGAAGGACTGAATGC...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCCATTTTCTTTGGCAGTaGGGGTGGTGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TEWASRLCMGILMAEALLHFLWQ*GWCGLG
Trigger: TCCCAACCCACACCACCCCCACTGCCAAAGAAAATG...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGAAGGTCTTTGGAGATaGGCTCGGTATTGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSEGLWR*ARYWLV
Trigger: TACGAGCCAATACCGAGCCCATCTCCAAAGACCTTC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGAAAGACTGCTTTCCATaGCTTTCTGAAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGKDCFP*LSEGLW
Trigger: CCAAAGACCTTCAGAAAGCCATGGAAAGCAGTCTTT...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAAGAGACCACGTCGACTaGAGAGTGACTCCATACTGT +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSRDHVD*RVTPYC
Trigger: ACAGTATGGAGTCACTCTCCAGTCGACGTGGTCTCT...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGTTCTCTTTCTGGGATaGCTCTGTTTCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSVLFLG*LCFRAG
Trigger: CCCTGCTCTGAAACAGAGCCATCCCAGAAAGAGAAC...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCATCTCGTCAAAAGGGTTaGGCAGGTGCAGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSSRQKG*AGAASH
Trigger: ATGAGATGCTGCACCTGCCCAACCCTTTTGACGAGA...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp GGCGAGCTTCAGAGTTATGGAAGAGGTGTATGCAGCTaGGTGAGATCATTCCATGGGAGCTGCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: GELQSYGRGVCS*VRSFHGSCSFM
Trigger: CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCCATAACTCTGAAGCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGGTTTGGAGTAGAAGATaGACCTTTTATCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVVWSRR*TFYLGS
Trigger: CGACCCAAGATAAAAGGTTCATCTTCTACTCCAAAC...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATCTTTCCATGGCTTTCTaGAGGTCTTTGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENLSMAF*RSLEMG
Trigger: GCCCATCTCCAAAGACCTTCAGAAAGCCATGGAAAG...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTTCAAGGCATCTGTATaGAGGCTTCGGAGTTTACCC +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMFKASV*RLRSLP
Trigger: GGGTAAACTCCGAAGCCTTCATACAGATGCCTTGAA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp TGCTTTCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACACTCTTCTGCTTGGCCTaGGAGAAGTTACTCACAATG +
Preference number: 4 (lower is better)
Translates to: CFPRSLAPACACNMVGSTLFCLA*EKLLTM
Trigger: CATTGTGAGTAACTTCTCTCAGGCCAAGCAGAAGAG...TGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATAGGAGAAAGTTCTCCTaGCACTTCATGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENRRKFS*HFMGHT
Trigger: CGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCT...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACCTTCGCTGTCTTCAGTaGCATCCTCTGCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHLRCLQ*HPLPFQ
Trigger: CTGAAAAGGCAGAGGATGGCACTGAAGACAGCGAAG...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TGGAAACGTGCAGTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGGGTGGGGCAAGGGTCTaGAGGAGAAGGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WKRAVAMTMLYGLNFVILGGARV*RRRALG
Trigger: GCCCAGGGCCCTTCTCCTGCAGACCCTTGCCCCACC...CAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCACTGCACGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGCAGAGCGTTCTTCTGTaGGAGGGTTGCAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMQSVLL*EGCRGG
Trigger: ACCACCTCTGCAACCCTCGCACAGAAGAACGCTCTG...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACTCCCGGTCATGCAACTaGGTGGGATCTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDSRSCN*VGSFFP
Trigger: TGGAAAGAAAGATCCCACCCAGTTGCATGACCGGGA...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTACCGCAGGCTCTTGAGTaGGTCTCTGGATTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLPQALE*VSGFLL
Trigger: CAGCAAAAATCCAGAGACCCACTCAAGAGCCTGCGG...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATGTTGCTGCTGCTGCCTaGCACCTGAGACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNVAAAA*HLRPLC
Trigger: GCACAAGGGTCTCAGGTGCCAGGCAGCAGCAGCAAC...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTTGTAGTATCTGCATCTaGGGGAACGGCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: DGDAKRITISLRAVADSICSICI*GNGIKL
Trigger: GAGCTTTATGCCGTTCCCCCAGATGCAGATACTACA...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGAAGGTCTTTGGAGATaGGCTCGGTATTGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIREGLWR*ARYWLV
Trigger: TACGAGCCAATACCGAGCCCATCTCCAAAGACCTTC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAAAGACCCAGCACTGCTaGCATCCCAGTTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALKTQHC*HPSWDQ
Trigger: TTGATCCCAACTGGGATGCCAGCAGTGCTGGGTCTT...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ATTATGGCTCTTCTGACTTCCCTTGGGGCATTGGCTTTGGTCCATGGCGTCCCCTGCATAGTTACTGAGTaGATCTTTTGCATACGAGGC +
Preference number: 4 (lower is better)
Translates to: IMALLTSLGALALVHGVPCIVTE*IFCIRG
Trigger: GCCTCGTATGCAAAAGATCCACTCAGTAACTATGCA...GGGGACGCCATGGACCAAAGCCAATGCCCCAAGGGAAGTCAGAAGAGCCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAACTTCAGCAAGGAAATaGCCACAATCCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSTSARK*PQSCWM
Trigger: CATCCAGCAGGATTGTGGCCATTTCCTTGCTGAAGT...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTACGTTGGTTCTCTTTCTaGGATGGCTCTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLRWFSF*DGSVSE
Trigger: CTCTGAAACAGAGCCATCCCAGAAAGAGAACCAACG...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGTCGGCCACAGTGAGATaGGGAACCTCCCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRSATVR*GTSLVM
Trigger: CATCACCAGGGAGGTTCCCCATCTCACTGTGGCCGA...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATGGTGGCTCTTCTGCTTaGCCTGAGAGAAGTTACTCA +
Preference number: 4 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENGGSSA*PERSYS
Trigger: TGAGTAACTTCTCTCAGGCCAAGCAGAAGAGCCACC...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGTCTCGTCAAAAGGGTTaGGCAGGTGCAGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRSRQKG*AGAASH
Trigger: ATGAGATGCTGCACCTGCCCAACCCTTTTGACGAGA...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp ATGCGGGTAGGTCTGACAGGAATCAAAGAACAGTACTaGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: MRVGLTGIKEQY*KVCSLRAPGEL
Trigger: CAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTGATTCCTGTCAGACCTACCCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp TCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTaGCTCCTAGAGGCATGGCTTCCCAGAGCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SRLCMGILMAEA*LLEAWLPRALE
Trigger: CTCTAAAGCTCTGGGAAGCCATGCCTCTAGGAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
3UTR CAA 72 bp ACTACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTaGATGGCTGAGGCTTTGCTCCTAGAGGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: TTEWASRLCMGI*MAEALLLEAWL
Trigger: AAGCCATGCCTCTAGGAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACTGGTGTCAATGCAGGTaGTGTAACTGGAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDWCQCR*CNWRVW
Trigger: CCAAACTCTCCAGTTACATCACCTGCATTGACACCA...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAGATACTGTTTGCTGCTaGAGGAACGGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALDTVCC*RNGSLL
Trigger: AAGGAGAGACCCGTTCCTTCAGCAGCAAACAGTATC...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGCAGCATCTCATAGATaGGAATGCCCGTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRAASHR*ECPSGI
Trigger: AATTCCAGACGGGCATTCTCATCTATGAGATGCTGC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTAGGGTTGCAGAGGTGGTaGAGATTTGAAAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLGLQRW*RFERDL
Trigger: AAGATCTCTTTCAAATCTTCACCACCTCTGCAACCC...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCTCAGCAGGGTTCGCTTaGTGTCTAACCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TEWASRLCMGILMAEALLSAGFA*CLTSFG
Trigger: TCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGA...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACAGGAGCCTGGTGATGTaGAGTCAGATGATATTGTGC +
Preference number: 4 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHRSLVM*SQMILC
Trigger: GCACAATATCATCTGACTGCACATCACCAGGCTCCT...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTACCTTCTGGGATAAACTaGTGGCTGTTTCAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALPSGIN*WLFQSV
Trigger: CACGCTCTGAAACAGCCAGCAGTTTATCCCAGAAGG...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CATGTTTGTGCAGCTGAACTGCTGTACAGTAAAGAAACACTCAGCCATTCACTGGGGTCTCTGGATTTTTaGTGGGGAGCTGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HVCAAELLYSKETLSHSLGSLDF*WGAVGG
Trigger: TCCACCCACAGCTCCCCAGCAAAAATCCAGAGACCC...CAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATACGGGTCTCTCCTTATaGAAAGGTCTCTCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENTGLSL*KGLSKD
Trigger: ATCCTTGGAGAGACCTTTGCATAAGGAGAGACCCGT...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGCGGAGTTGGTCTTTCTaGCCAGCCATGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMRSWSF*PAMKRS
Trigger: AGACCTCTTCATGGCTGGGCAGAAAGACCAACTCCG...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGCAGAGCGTTCTTCTGTaGGAGGGTTGCAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRQSVLL*EGCRGG
Trigger: ACCACCTCTGCAACCCTCGCACAGAAGAACGCTCTG...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACAAGTGCTTGTCTCTGTaGCTTCTGGATGCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHKCLSL*LLDASS
Trigger: ACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTT...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACTTCAGCAAGGAAATaGCCACAATCCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDTSARK*PQSCWM
Trigger: CATCCAGCAGGATTGTGGCCATTTCCTTGCTGAAGT...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp CTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTaGGCTTCTTTCCTTTCCTTAAATTCTGAGTGGATA +
Preference number: 4 (lower is better)
Translates to: LNGAHVPGQGWQ*ASFLSLNSEWI
Trigger: TATCCACTCAGAATTTAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
3UTR CAA 72 bp AGGTATACAAAATGGATCTGTCTACCCCACTGTAGGTaGCTTTCCCAGAAGCCTAGCTCCAGCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: RYTKWICLPHCR*LSQKPSSSMCM
Trigger: CATGCACATGCTGGAGCTAGGCTTCTGGGAAAGCAACCTACAGTGGGGTAGACAGATCCATTTTGTATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTACCTCCTCCATGTTACTaGAAAGCACATCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALPPPCY*KAHLPH
Trigger: GTGAGGAAGATGTGCTTTTCAGTAACATGGAGGAGG...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGCTTTTGGAAGTCAGTaGTTCGTCCTTCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRAFGSQ*FVLLLI
Trigger: AATGAGGAGAAGGACGAATCACTGACTTCCAAAAGC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCACCTTCCCCACTAGACTaGGATGTAAAAAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: LTEGSWPITACGGRNSDSPSPLD*DVKRDL
Trigger: CAAATCTCTTTTTACATCTCAGTCTAGTGGGGAAGG...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR TCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGTGTCGCTGGTTAGCCTaGAGTCTGACCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRCRWLA*SLTSCL
Trigger: TAGACAGCTGGTCAGACTTCAGGCTAACCAGCGACA...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTATCAGCAGGGTTCGCTTaGTGTCTAACCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALSAGFA*CLTSFG
Trigger: TCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGA...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCGCAAGGACAGCTTTGTaGGTCTCTGGAACTTTCACC +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPARTAL*VSGTFT
Trigger: GGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGC...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGAAGTCCTCGATAAAGTaGTTGTCTCTGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRKSSIK*LSLWLL
Trigger: CAGAAGCCACAGAGACAAGCACTTTATCGAGGACTT...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp GTTACTATGCTAACAAGGCACTCTGAGGGACAGCGATTCTTGCTCTTGCCTGCTAAGTCCTCGATAAAGTaGTTGTCTCTGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VTMLTRHSEGQRFLLLPAKSSIK*LSLWLL
Trigger: CAGAAGCCACAGAGACAAGCACTTTATCGAGGACTT...AGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp AATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTTATTGTTAAGTGGTTTCTaGCTCAGGGACGTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: NGAHVPGQGWQLASFLSLLLSGF*LRDVLF
Trigger: AAACAAGACGTCCCTGAGCCAGAAACCACTTAACAA...TAAGGAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGTCCCTTGGGATGCCGTaGATGCTTGGGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRSLGMP*MLGRYH
Trigger: ATGATACCTCCCAAGCATCCACGGCATCCCAAGGGA...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CATGTTTGTGCAGCTGAACTGCTGTACAGTAAAGAAACACTCAGCCATTCACTGTCCCTTGGGATGCCGTaGATGCTTGGGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: HVCAAELLYSKETLSHSLSLGMP*MLGRYH
Trigger: ATGATACCTCCCAAGCATCCACGGCATCCCAAGGGA...CAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GTTACTATGCTAACAAGGCACTCTGAGGGACAGCGATTCTTGCTCTTGCCTGCTGCATTCAGTCCTTCTTaGTCTGTCTTCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VTMLTRHSEGQRFLLLPAAFSPS*SVFSPK
Trigger: CTTTGGAGAGAAGACAGACCAAGAAGGACTGAATGC...AGCAGGCAAGAGCAAGAATCGCTGTCCCTCAGAGTGCCTTGTTAGCATAGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTAAAGTGCTTGTCTCTGTaGCTTCTGGATGCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: SRERGGHFKGEESAVRALKCLSL*LLDASS
Trigger: ACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTT...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTTGCATAGTTACTGAGTaGATCTTTTGCATACGAGGC +
Preference number: 4 (lower is better)
Translates to: DGDAKRITISLRAVADSICIVTE*IFCIRG
Trigger: GCCTCGTATGCAAAAGATCCACTCAGTAACTATGCA...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTACTGTTTGTGACTCGTTaGTTCTCTTTCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLLFVTR*FSFWDG
Trigger: GCCATCCCAGAAAGAGAACCAACGAGTCACAAACAG...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCTCACACTTCTTATACTaGGTGGCCGTGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: TEWASRLCMGILMAEALLSHFLY*VAVMIS
Trigger: AGAGATCATCACGGCCACCCAGTATAAGAAGTGTGA...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGACTGCTGAGGATCACTaGCAAAGCCTTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRTAEDH*QSLQHH
Trigger: GTGATGCTGAAGGCTTTGGCAGTGATCCTCAGCAGT...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACAGCACAGATTCTCTaGAGAGACTTATTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRTAQIL*RDLFRK
Trigger: CTTACGGAATAAGTCTCTGCAGAGAATCTGTGCTGT...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGTTGGTAAAATGCCTTTaGAACAGGTTACTTGCATGG +
Preference number: 4 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMLVKCL*NRLLAW
Trigger: CCATGCAAGTAACCTGTTGCAAAGGCATTTTACCAA...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGACGGGTCTCTCCTTATaGAAAGGTCTCTCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMTGLSL*KGLSKD
Trigger: ATCCTTGGAGAGACCTTTGCATAAGGAGAGACCCGT...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TGGAAACGTGCAGTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGTGCACAGGCAGACTCTaGCGGACAGCCAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: WKRAVAMTMLYGLNFVILCTGRL*RTARLW
Trigger: CCATAGCCTGGCTGTCCGGCAGAGTCTGCCTGTGCA...CAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCACTGCACGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATCGTCTTCTCAGAGTCTaGAGGAAGCTGGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNRLLRV*RKLVQA
Trigger: AGCTTGCACCAGCTTCCTCCAGACTCTGAGAAGACG...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACAGAATTGTTGTTAAGTaGTTTCTGGCTCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDRIVVK*FLAQGR
Trigger: ACGTCCCTGAGCCAGAAACCACTTAACAACAATTCT...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTGAAAACTTTTGTAGATaGCGAGATTGTCATACGCAT +
Preference number: 4 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSENFCR*RDCHTH
Trigger: ATGCGTATGACAATCTCGCCATCTACAAAAGTTTTC...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTAAGTCACTGGCTTCGTaGATGGATCTTTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: DGDAKRITISLRAVADSIKSLAS*MDLSEF
Trigger: AAATTCAGAAAGATCCATCCACGAAGCCAGTGACTT...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGTGCTGGCATCCCAGTTaGGATCAATATCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRCWHPS*DQYRRW
Trigger: CCACCTACGATATTGATCCCAACTGGGATGCCAGCA...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATAAGACCCAGCACTGCTaGCATCCCAGTTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNKTQHC*HPSWDQ
Trigger: TTGATCCCAACTGGGATGCCAGCAGTGCTGGGTCTT...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCAGCGGCTCGCCTGCTaGCTTCAGAGTGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: ISCQLFIISGLYFILLRHQRLAC*LQSAKL
Trigger: CAATTTTGCACTCTGAAGGCAGCAGGCGAGCCGCTG...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATAGCAGCAGACACACTTaGCTCTCATACAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNSSRHT*LSYKSG
Trigger: CCCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCT...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGGGTCATGCAACTGGGTaGGATCTTTCTTTCCAACGA +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRGHATG*DLSFQR
Trigger: TCGTTGGAAAGAAAGATCCCACCCAGTTGCATGACC...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGCTTTCACCGAGCTTTTaGAAGTCAGTGATTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMLSPSF*KSVIRP
Trigger: AGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAG...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATGGGGGTGGTGTGGGTTaGGAAGCATTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISCQLFIISGLYFILLRHGGGVG*EAFSPS
Trigger: AGAAGGACTGAATGCTTCCCAACCCACACCACCCCC...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGATGAGAATGCCCGTCTaGAATTCATCACACTTCTTA +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRMRMPV*NSSHFL
Trigger: TAAGAAGTGTGATGAATTCCAGACGGGCATTCTCAT...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGCAATTGTTAAACTCCTaGACCTTCTGCGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRQLLNS*TFCATE
Trigger: CTCAGTAGCGCAGAAGGTGCAGGAGTTTAACAATTG...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATTGCTCTTCCTTTCTCTaGCCCAGCCTTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ISCQLFIISGLYFILLRHCSSFL*PSLALV
Trigger: GACCAAAGCAAGGCTGGGGCAGAGAAAGGAAGAGCA...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR GCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCACTGAGTGGATCTTTTaGATACGAGGCAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPTEWIF*IRGSVV
Trigger: TACTACACTGCCTCGTATGCAAAAGATCCACTCAGT...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGAGATGGGCTCGGTATTaGCTCGTATCATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMRWARY*LVSFSL
Trigger: CAAAGAAAATGATACGAGCCAATACCGAGCCCATCT...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCAGATGGGCTCGGTATTaGCTCGTATCATTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPRWARY*LVSFSL
Trigger: CAAAGAAAATGATACGAGCCAATACCGAGCCCATCT...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGAAAGACTGCTTTCCATaGCTTTCTGAAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HICETIGMTNAPREGDCMKDCFP*LSEGLW
Trigger: CCAAAGACCTTCAGAAAGCCATGGAAAGCAGTCTTT...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATTGGCCACAATCCTGCTaGATGTTAAAATGCACAGGC +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNWPQSC*MLKCTG
Trigger: GCCTGTGCATTTTAACATCCAGCAGGATTGTGGCCA...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATGGGTTGCAGAGGTGGTaGAGATTTGAAAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNGLQRW*RFERDL
Trigger: AAGATCTCTTTCAAATCTTCACCACCTCTGCAACCC...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGCTGCTGCCTTCAGAGTaGAAAATTGATTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCQLFIISGLYFILLRHRLLPSE*KIDSAS
Trigger: AGAAGCTGAATCAATTTTGCACTCTGAAGGCAGCAG...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGATTGTCATACGCATTTaGATTAATAACAATGGGGAC +
Preference number: 4 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRIVIRI*INNNGD
Trigger: GTCCCCATTGTTATTAATCCAAATGCGTATGACAAT...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATTCACACTTCTTATACTaGGTGGCCGTGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNSHFLY*VAVMIS
Trigger: AGAGATCATCACGGCCACCCAGTATAAGAAGTGTGA...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATGTCTTCACATTTAACTaGCAGTCTCTTCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNVFTFN*QSLQGI
Trigger: GATGCCTTGAAGAGACTGGCAGTTAAATGTGAAGAC...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR GCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATACTGAGTGGATCTTTTaGATACGAGGCAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNTEWIF*IRGSVV
Trigger: TACTACACTGCCTCGTATGCAAAAGATCCACTCAGT...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CCA 90 bp CATGTTTGTGCAGCTGAACTGCTGTACAGTAAAGAAACACTCAGCCATTCACTGATGAGAATGCCCGTCTaGAATTCATCACACTTCTTA +
Preference number: 4 (lower is better)
Translates to: HVCAAELLYSKETLSHSLMRMPV*NSSHFL
Trigger: TAAGAAGTGTGATGAATTCCAGACGGGCATTCTCAT...CAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR TCA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATTTCAGACAAATTAGGTaGCTTAACAGGGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNFRQIR*LNRDGF
Trigger: AAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAA...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
3UTR CAA 72 bp ATATTTGCTGATTTCCCAATACTGGATAAATCAAACTaGGAAAGCTTGCATGACCCACTACTGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IFADFPILDKSN*ESLHDPLLSGL
Trigger: AAGCCCACTCAGTAGTGGGTCATGCAAGCTTTCCAAGTTTGATTTATCCAGTATTGGGAAATCAGCAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS CCA 90 bp GCTGGCCTCTCCTTTGGCCTCTGTGAACCAGTGATGGCGCTGGACTaGAGGGGGCGGCAGCATGTGGATGACTGTCCCGTCCAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: AGLSFGLCEPVMALD*RGRQHVDDCPVQAH
Trigger: GTGGGCCTGGACGGGACAGTCATCCACATGCTGCCGCCCCCTCCAGTCCAGCGCCATCACTGGTTCACAGAGGCCAAAGGAGAGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp AGGATGCGCTCAGAAGGGTTGGGATTCAGGAGGCAGCTAGCAAGCTaGTGTAGACCCCAGGAGTACGGGGAGCGGAGAGGGATCCGAGGC +
Preference number: 5 (lower is better)
Translates to: RMRSEGLGFRRQLAS*CRPQEYGERRGIRG
Trigger: GCCTCGGATCCCTCTCCGCTCCCCGTACTCCTGGGGTCTACAGCAGCTTGCTAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp GTAGGACAAGCTAAGGTGGGGCAAGGGTCTGCAGGAGAAGGGCCCTaGGCAGCTCCCCCAGGTTGGTGCTGGACAAGCAGCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VGQAKVGQGSAGEGP*AAPPGWCWTSSKFS
Trigger: GGAGAACTTGCTGCTTGTCCAGCACCAACCTGGGGGAGCTGCCCAGGGCCCTTCTCCTGCAGACCCTTGCCCCACCTTAGCTTGTCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATGCCCCAGCCTTGCTTaGGTCCACACTGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RATHSGRQSFWKRLALRGCPSLA*VHTEVA
Trigger: GGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGCA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATTCTCCCTAGTGCTGTaGCTGCTGCTGCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: RATHSGRQSFWKRLALRGFSLVL*LLLPGT
Trigger: GGTGCCAGGCAGCAGCAGCAACAGCACTAGGGAGAA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GAGGAAGTAGACCGTGGTGGGGGAAAGGGAGGCGGTGGCTCACTCTaGGCGCTCGTCACTAATTTGGAGGGAGGAGAAGTCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: EEVDRGGGKGGGGSL*ALVTNLEGGEVTGF
Trigger: GAAGCCAGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGCCCAGAGTGAGCCACCGCCTCCCTTTCCCCCACCACGGTCTACTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp CCTTTGCAACAGGTTACTTGCATGGTAAGGGGAGGAAGTAGACCGTaGTGGGGGAAAGGGAGGCGGTGGCTCACTCTGGGCGCTCGTCAC +
Preference number: 5 (lower is better)
Translates to: PLQQVTCMVRGGSRP*WGKGRRWLTLGARH
Trigger: GTGACGAGCGCCCAGAGTGAGCCACCGCCTCCCTTTCCCCCACCACGGTCTACTTCCTCCCCTTACCATGCAAGTAACCTGTTGCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp TTCTTATACTGGGTGGCCGTGATGATCTCTGGGGCAAGGCGGGACTaGTCTCGGAGGATCTGGGGGTCCACCAGGTGGCTCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FLYWVAVMISGARRD*SRRIWGSTRWLFCL
Trigger: CAAGCAGAAGAGCCACCTGGTGGACCCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCCAGAGATCATCACGGCCACCCAGTATAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp GGGGGCCGGAAGTTGCCCGTGCTCCTGACTCGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCCCACTGCCGTGGGTGATGGGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GGRKLPVLLTRWLLL*LALVFPLPWVMGVF
Trigger: GAAGACGCCCATCACCCACGGCAGTGGGAAAACTAATGCCAATCACAGTAACAACCACCGAGTCAGGAGCACGGGCAACTTCCGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGTGGGGGTGGTGTGGGTaGGGAAGCATTCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQWGWCG*GSIQSF
Trigger: GAAGGACTGAATGCTTCCCAACCCACACCACCCCCA...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGGGCAGCTCCCCCAGGTaGGTGCTGGACAAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVGSSPR*VLDKQQ
Trigger: TTGCTGCTTGTCCAGCACCAACCTGGGGGAGCTGCC...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp CTGGAATTCATCACACTTCTTATACTGGGTGGCCGTGATGATCTCTaGGGCAAGGCGGGACTGGTCTCGGAGGATCTGGGGGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: LEFITLLILGGRDDL*GKAGLVSEDLGVHQ
Trigger: CTGGTGGACCCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCCAGAGATCATCACGGCCACCCAGTATAAGAAGTGTGATGAATTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGCTCGCCACACACGCTTaGCCCATCTGCCACCATCAT +
Preference number: 5 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGLATHA*PICHHH
Trigger: ATGATGGTGGCAGATGGGCAAAGCGTGTGTGGCGAG...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGGATGCCGTGGATGCTaGGGAGGTATCATAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHGCRGC*GGIIAA
Trigger: AGCAGCTATGATACCTCCCAAGCATCCACGGCATCC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp GCAGCCATCAGCCTTCCTGTGAGCCGAGCTCCAGACCCACTGCAGAGTCTTAGGGAGCAGCAGACACACTaGCCTCTCATACAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: AAISLPVSRAPDPLQSLREQQTH*PLIQVR
Trigger: CCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCTC...CCTAAGACTCTGCAGTGGGTCTGGAGCTCGGCTCACAGGAAGGCTGATGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp CAGGTGCTCGCTGGCCATGGCTGCCGACACATCCACAACGGTATATaGCTTACACAGCGGCTGTTCCAGATTTACCACACGGTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: QVLAGHGCRHIHNGI*LTQRLFQIYHTVGL
Trigger: AAGCCCTACCGTGTGGTAAATCTGGAACAGCCGCTGTGTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GGGGAAAGGGAGGCGGTGGCTCACTCTGGGCGCTCGTCACTAATTTaGAGGGAGGAGAAGTCACTGGCTTCGTGGATGGATCTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GEREAVAHSGRSSLI*REEKSLASWMDLSE
Trigger: TTCAGAAAGATCCATCCACGAAGCCAGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGCCCAGAGTGAGCCACCGCCTCCCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATGCGCTCGTCACTAATTaGGAGGGAGGAGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHALVTN*EGGEVT
Trigger: AGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGC...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGATGCGCTCAGAAGGGTaGGGATTCAGGAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGMRSEG*GFRRQL
Trigger: TAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGCAT...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGACATTGGAGGATGCCTTaGGCGTCAGAAATGAGGATG +
Preference number: 5 (lower is better)
Translates to: RATHSGRQSFWKRLALRGHWRMP*ASEMRM
Trigger: CATCCTCATTTCTGACGCCAAAGGCATCCTCCAATG...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp CGAACAGGAGACAGGGTGTTTGCCCTGAAGTTAGCAAAGCGAGGCTaGCCTCTCATGCGAATCTCCATGGCCAACAGCTCTTCATCGCTC +
Preference number: 5 (lower is better)
Translates to: RTGDRVFALKLAKRG*PLMRISMANSSSSL
Trigger: GAGCGATGAAGAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAGCCTCGCTTTGCTAACTTCAGGGCAAACACCCTGTCTCCTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp CCAAAGGCAATGGCATCATCCACCGCTCCCTTGGGATGCCGTGGATaGTTGGGAGGTATCATAGCTGCTCGAGATTGTCCTAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PKAMASSTAPLGCRG*LGGIIAARDCPRLL
Trigger: CAGCAACCTAGGACAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp AAGATGAACCTTTTATCTTGGGTCGCCCCAGGTGCTCGCTGGCCATaGCTGCCGACACATCCACAACGGTATATGGCTTACACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: KMNLLSWVAPGARWP*LPTHPQRYMAYTAA
Trigger: AGCCGCTGTGTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp CCTTTCTCTGCCCCAGCCTTGCTTTGGTCCACACTGAGGTGGCCTTaGTCAGGGTCACACCTGTACATGAAGACTATAGCAGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PFSAPALLWSTLRWP*SGSHLYMKTIAGFS
Trigger: CGAGAAGCCTGCTATAGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGCAGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GGGAAGCATTCAGTCCTTCTTGGTCTGTCTTCTCTCCAAAGGCAATaGCATCATCCACCGCTCCCTTGGGATGCCGTGGATGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: GKHSVLLGLSSLQRQ*HHPPLPWDAVDAWE
Trigger: CTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGAAGACAGACCAAGAAGGACTGAATGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGAGCCTTAGGGCTAGATaGAGGTGCTTCTGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGSLRAR*RCFWRS
Trigger: ACTCCTCCAGAAGCACCTCAATCTAGCCCTAAGGCT...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCGGATGCCGTGGATGCTaGGGAGGTATCATAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFGCRGC*GGIIAA
Trigger: AGCAGCTATGATACCTCCCAAGCATCCACGGCATCC...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCGGCTGGAGATACTGTTaGCTGCTGAAGGAACGGGTC +
Preference number: 5 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGGWRYC*LLKERV
Trigger: GACCCGTTCCTTCAGCAGCAAACAGTATCTCCAGCC...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp TTCTTCTTCCCTTTCCAGGTCAGGTGGAGGCAGTGTTGGTGTGACTaGAGTGCCATCTTGCTTCCCAGCAGGAGTTCTTGGATCCCGAGG +
Preference number: 5 (lower is better)
Translates to: FFFPFQVRWRQCWCD*SAILLPSRSSWIPR
Trigger: CCTCGGGATCCAAGAACTCCTGCTGGGAAGCAAGATGGCACTTCAGTCACACCAACACTGCCTCCACCTGACCTGGAAAGGGAAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp AGCAGCAGACACACTTGCCTCTCATACAAGTCAGGGCTGTTCCCATaGTGGGCCAAAGAATCTCGCACGAAGTCGGCCACAGTGAGATGG +
Preference number: 5 (lower is better)
Translates to: SSRHTCLSYKSGLFP*WAKESRTKSATVRW
Trigger: CCATCTCACTGTGGCCGACTTCGTGCGAGATTCTTTGGCCCATCATGGGAACAGCCCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp AGCAGAGCGTTCTTCTGTGCGAGGGTTGCAGAGGTGGTGAAGATTTaGAAGAGATCTTCTCGGGGGCCCCAGAGCAGACATTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SRAFFCARVAEVVKI*KRSSRGPQSRHWRM
Trigger: CATCCTCCAATGTCTGCTCTGGGGCCCCCGAGAAGATCTCTTTCAAATCTTCACCACCTCTGCAACCCTCGCACAGAAGAACGCTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp GAGTTTGGAGTAGAAGATGAACCTTTTATCTTGGGTCGCCCCAGGTaGTCGCTGGCCATGGCTGCCGACACATCCACAACGGTATATGGC +
Preference number: 5 (lower is better)
Translates to: EFGVEDEPFILGRPR*SLAMAADTSTTVYG
Trigger: GCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCATCTTCTACTCCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp TCCAGGTCAGGTGGAGGCAGTGTTGGTGTGACTGAAGTGCCATCTTaGTTCCCAGCAGGAGTTCTTGGATCCCGAGGAGAAAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SRSGGGSVGVTEVPS*FPAGVLGSRGESSP
Trigger: AGGAGAACTTTCTCCTCGGGATCCAAGAACTCCTGCTGGGAAGCAAGATGGCACTTCAGTCACACCAACACTGCCTCCACCTGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp GTCTTCTCTCCAAAGGCAATGGCATCATCCACCGCTCCCTTGGGATaGCGTGGATGCTTGGGAGGTATCATAGCTGCTCGAGATTGTCCT +
Preference number: 5 (lower is better)
Translates to: VFSPKAMASSTAPLG*RGCLGGIIAARDCP
Trigger: AGGACAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp AGTTTCTGCCTTCCCCTCTTCTTCGCTGTCTTCAGTGCCATCCTCTaGCTTTTCAGGAGCATCAGGATCCTCCCAGGGAAGCAGACGACT +
Preference number: 5 (lower is better)
Translates to: SFCLPLFFAVFSAIL*LFRSIRILPGKQTT
Trigger: AGTCGTCTGCTTCCCTGGGAGGATCCTGATGCTCCTGAAAAGGCAGAGGATGGCACTGAAGACAGCGAAGAAGAGGGGAAGGCAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CTGACGGAAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCATGGGTCTCTGGATTTTaGCTGGGGAGCTGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LTEGSWPITACGGRNSDSWVSGF*LGSCGW
Trigger: CCACCCACAGCTCCCCAGCAAAAATCCAGAGACCCA...TGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTTCCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp GCTGAATGGAGCCCATGTCCCTGGACAAGGGTGGCAGTTGGCTTCTTTCCTTTCCTCGTATCATTTTCTTaGGCAGTGGGGGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: AEWSPCPWTRVAVGFFPFLVSFS*AVGVVW
Trigger: CCACACCACCCCCACTGCCAAAGAAAATGATACGAG...GAAAGGAAAGAAGCCAACTGCCACCCTTGTCCAGGGACATGGGCTCCATTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGCTCGTATCATTTTCTTaGGCAGTGGGGGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVLVSFS*AVGVVW
Trigger: CCACACCACCCCCACTGCCAAAGAAAATGATACGAG...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TCTGCAAGTACTGTGGAAAGTGAAGGACTGTGCCCGCTGACATGGTCAGTGGTCATGCGCTCAGAAGGGTaGGGATTCAGGAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: SASTVESEGLCPLTWSVVMRSEG*GFRRQL
Trigger: TAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGCAT...GACCACTGACCATGTCAGCGGGCACAGTCCTTCACTTTCCACAGTACTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS TCA 90 bp AAACCGCATCTCCAGCTTCGCAGCACGGTTTGTCGCTGGTTAGCCTaGAGTCTGACCAGCTGTCTACTCCAAAGCGGAGTTGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KPHLQLRSTVCRWLA*SLTSCLLQSGVGLS
Trigger: AGAAAGACCAACTCCGCTTTGGAGTAGACAGCTGGTCAGACTTCAGGCTAACCAGCGACAAACCGTGCTGCGAAGCTGGAGATGCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp TTCCGTTTTGCCCGCAGGCTCTTGAGTGGGTCTCTGGATTTTTGCTaGGGAGCTGTGGGTGGAACTGTAGCTTCTTTGTGGAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: FRFARRLLSGSLDFC*GAVGGTVASLWRRL
Trigger: CAGTCTTCTCCACAAAGAAGCTACAGTTCCACCCACAGCTCCCCAGCAAAAATCCAGAGACCCACTCAAGAGCCTGCGGGCAAAACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp AGCAGACGACTAGGGACTTCAGCAAGGAAATGGCCACAATCCTGCTaGATGTTAAAATGCACAGGCAGACTCTGCCGGACAGCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: SRRLGTSARKWPQSC*MLKCTGRLCRTARL
Trigger: TAGCCTGGCTGTCCGGCAGAGTCTGCCTGTGCATTTTAACATCCAGCAGGATTGTGGCCATTTCCTTGCTGAAGTCCCTAGTCGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGCCACTCACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGATCACCTTCAGAATTGTaGTTAAGTGGTTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RATHSGRQSFWKRLALRGSPSEL*LSGFWL
Trigger: GAGCCAGAAACCACTTAACAACAATTCTGAAGGTGA...TCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTGAGTGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTTTGCCCGCAGGCTCTaGAGTGGGTCTCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: PITACGGRNSDSDRHHQAFARRL*SGSLDF
Trigger: AAAATCCAGAGACCCACTCAAGAGCCTGCGGGCAAA...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACCACACTGAGGTGGCCTaGGTCAGGGTCACACCTGTA +
Preference number: 5 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHHTEVA*VRVTPV
Trigger: TACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTG...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTTCCCAGCAGGAGTTCTaGGATCCCGAGGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSSQQEF*DPEEKV
Trigger: AACTTTCTCCTCGGGATCCAAGAACTCCTGCTGGGA...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTATCATCCACCGCTCCCTaGGGATGCCGTGGATGCTTG +
Preference number: 5 (lower is better)
Translates to: SRERGGHFKGEESAVRALSSTAP*GCRGCL
Trigger: CAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGA...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp ACTTCGGTGCACTTGGGTTTGTCTCAGCGCAGCACTTTGGGTCTCTCAGAAAATTGGGGGTGGTGTGGGTaGGGAAGCATTCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSVHLGLSQRSTLGLSENWGWCG*GSIQSF
Trigger: GAAGGACTGAATGCTTCCCAACCCACACCACCCCCA...ATTTTCTGAGAGACCCAAAGTGCTGCGCTGAGACAAACCCAAGTGCACCGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp ACTGAGTGGGCTTCAAGATTGTGCATGGGGATTTTGATGGCTGAGGCTTTGCTCGCTTCGCAGCACGGTTaGTCGCTGGTTAGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TEWASRLCMGILMAEALLASQHG*SLVSLK
Trigger: CTTCAGGCTAACCAGCGACAAACCGTGCTGCGAAGC...GAGCAAAGCCTCAGCCATCAAAATCCCCATGCACAATCTTGAAGCCCACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS TCA 90 bp CTTTTTCTTCTTCCCTTTCCAGGTCAGGTGGAGGCAGTGTTGGTGTaGCTGAAGTGCCATCTTGCTTCCCAGCAGGAGTTCTTGGATCCC +
Preference number: 5 (lower is better)
Translates to: LFLLPFPGQVEAVLV*LKCHLASQQEFLDP
Trigger: GGGATCCAAGAACTCCTGCTGGGAAGCAAGATGGCACTTCAGTCACACCAACACTGCCTCCACCTGACCTGGAAAGGGAAGAAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp CAGCGTTTAGGTTTTGCATCAGCGGCTCGCCTGCTGCCTTCAGAGTaGAAAATTGATTCAGCTTCTGTTGATCGGGTAGGACTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QRLGFASAARLLPSE*KIDSASVDRVGLVG
Trigger: GCCAACCAGTCCTACCCGATCAACAGAAGCTGAATCAATTTTGCACTCTGAAGGCAGCAGGCGAGCCGCTGATGCAAAACCTAAACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp TCGGCCACAGTGAGATGGGGAACCTCCCTGGTGATGACCACAACGTaGCTTCTTTGTTTCCTGTTTGTGACTCGTTGGTTCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SATVRWGTSLVMTTT*LLCFLFVTRWFSFW
Trigger: CCAGAAAGAGAACCAACGAGTCACAAACAGGAAACAAAGAAGCCACGTTGTGGTCATCACCAGGGAGGTTCCCCATCTCACTGTGGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp GCGAACTTGATCATCAGCAGGGTTCGCTTGATGTCTAACCAGTTTTaGAGCAGAGCGTTCTTCTGTGCGAGGGTTGCAGAGGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ANLIISRVRLMSNQF*SRAFFCARVAEVVK
Trigger: CTTCACCACCTCTGCAACCCTCGCACAGAAGAACGCTCTGCTCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGATGATCAAGTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CGTGACCTTTCCCATTCCCCTTGTCTTCCGGCCATTCCAATAGCCAGCTTCGGGAGCCCGTTGTTGTTATaGGATATCTTCTGTGCACTG +
Preference number: 5 (lower is better)
Translates to: RDLSHSPCLPAIPIASFGSPLLL*DIFCAL
Trigger: CAGTGCACAGAAGATATCCAATAACAACAACGGGCT...CCCGAAGCTGGCTATTGGAATGGCCGGAAGACAAGGGGAATGGGAAAGGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTAGAGCAAGGACAGCTTaGTGCGTCTCTGGAACTTTC +
Preference number: 5 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSRARTA*CVSGTF
Trigger: GAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTCT...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGCCATATATCTGTAGAAGCTTaGCTCTCTGGCTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: LGGSLSGRGSHSEEQVSHISVEA*LSGFSV
Trigger: TACTGAGAAGCCAGAGAGCAAAGCTTCTACAGATAT...ATGGCTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTTTCCGCTCTGTGCTGTaGGAAAACCCTTTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSFRSVL*ENPLAW
Trigger: CCAAGCTAAAGGGTTTTCCAACAGCACAGAGCGGAA...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CACTCTGGGAGGCAGTCTTTCTGGAAGAGGCTCGCACTCCGAGGAACAGGTCAGGATGTAAAAAGAGATTaGGGTCTGACTGGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: HSGRQSFWKRLALRGTGQDVKRD*GLTGGF
Trigger: AAACCCACCAGTCAGACCCAAATCTCTTTTTACATC...CTGACCTGTTCCTCGGAGTGCGAGCCTCTTCCAGAAAGACTGCCTCCCAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp AACCCAAACTTCAGCAGGCGGGACAGGGTGAAGGTGAAGGACAGTGAAGCAGTGTCCTCGATAAAGTGCTaGTCTCTGTGGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: NPNFSRRDRVKVKDSEAVSSIKC*SLWLLD
Trigger: ATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGA...CACTGCTTCACTGTCCTTCACCTTCACCCTGTCCCGCCTGCTGAAGTTTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TGCTTTCCCAGAAGCCTAGCTCCAGCATGTGCATGCAACATGGTTGGTTCCACATTCTCGTCAAAAGGGTaGGGCAGGTGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: CFPRSLAPACACNMVGSTFSSKG*GRCSIS
Trigger: TGAGATGCTGCACCTGCCCAACCCTTTTGACGAGAA...TGTGGAACCAACCATGTTGCATGCACATGCTGGAGCTAGGCTTCTGGGAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCAGAGGTGGTGAAGATTaGAAAGAGATCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGRGGED*KEIFSG
Trigger: CCCCGAGAAGATCTCTTTCAAATCTTCACCACCTCT...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp CCGGGTTCTCGTCAAAAGGGTTGGGCAGGTGCAGCATCTCATAGATaGGAATGCCCGTCTGGAATTCATCACACTTCTTATACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PGSRQKGWAGAASHR*ECPSGIHHTSYTGW
Trigger: CCACCCAGTATAAGAAGTGTGATGAATTCCAGACGGGCATTCTCATCTATGAGATGCTGCACCTGCCCAACCCTTTTGACGAGAACCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp CTGCCGTGGGTGATGGGCGTCTTCTCAGAGTCTGGAGGAAGCTGGTaGAAGCTTTTAGGTTTAAAGCAATTCTTGCATTCGCCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LPWVMGVFSESGGSW*KLLGLKQFLHSPGF
Trigger: GAAACCTGGCGAATGCAAGAATTGCTTTAAACCTAAAAGCTTGCACCAGCTTCCTCCAGACTCTGAGAAGACGCCCATCACCCACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp ATCTCCATGGCCAACAGCTCTTCATCGCTCTCATCCCAGCTCTCATaGTCCTCCTCCATGTTACTGAAAAGCACATCTTCCTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: ISMANSSSSLSSQLS*SSSMLLKSTSSSLS
Trigger: GGAGAGTGAGGAAGATGTGCTTTTCAGTAACATGGAGGAGGAGCATGAGAGCTGGGATGAGAGCGATGAAGAGCTGTTGGCCATGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GCAGGAGTTCTTGGATCCCGAGGAGAAAGTTCTCCTGCCACTTCATaGGTCACACGACTGCAAGCTTTGTCAGGAATCTGTGATGGAAGA +
Preference number: 5 (lower is better)
Translates to: AGVLGSRGESSPATS*VTRLQALSGICDGR
Trigger: TCTTCCATCACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCTCGGGATCCAAGAACTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GCTCGGTATTGGCTCGTATCATTTTCTTTGGCAGTGGGGGTGGTGTaGGTTGGGAAGCATTCAGTCCTTCTTGGTCTGTCTTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: ARYWLVSFSLAVGVV*VGKHSVLLGLSSLQ
Trigger: TTGGAGAGAAGACAGACCAAGAAGGACTGAATGCTTCCCAACCCACACCACCCCCACTGCCAAAGAAAATGATACGAGCCAATACCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp TTTGGAGATGGGCTCGGTATTGGCTCGTATCATTTTCTTTGGCAGTaGGGGTGGTGTGGGTTGGGAAGCATTCAGTCCTTCTTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FGDGLGIGSYHFLWQ*GWCGLGSIQSFLVC
Trigger: ACAGACCAAGAAGGACTGAATGCTTCCCAACCCACACCACCCCCACTGCCAAAGAAAATGATACGAGCCAATACCGAGCCCATCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp CACTTCCTCCCGATTGTCAAGTCCTCGATAAAGTGCTTGTCTCTGTaGCTTCTGGATGCTTCGAGTCTGTCTATAGGAGAGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: HFLPIVKSSIKCLSL*LLDASSLSIGETTS
Trigger: CGACGTGGTCTCTCCTATAGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTACCCAGGATGACAGGCTaGTTCTCACAGTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRERGGHFKGEESAVRALPRMTG*FSQCSW
Trigger: CCAGGAACACTGTGAGAACAAGCCTGTCATCCTGGG...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCACTTTCACCGAGCTTTaGGAAGTCAGTGATTCGTCC +
Preference number: 5 (lower is better)
Translates to: PITACGGRNSDSDRHHQATFTEL*EVSDSS
Trigger: GGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGT...GGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp TTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACACCACCAGGCCTGGCTATTTTAGGGATCTTTaGTCGTGGACTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LLLVGEETLTQTDTTRPGYFRDL*SWTGAG
Trigger: TCCAGCACCAGTCCACGACAAAAGATCCCTAAAATA...GCCAGGCCTGGTGGTGTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGTCTTCCTCATCTGTTTaGCGGCGGCGGAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRSSSSV*RRRKKL
Trigger: AAGCTTCTTCCGCCGCCGCAAAACAGATGAGGAAGA...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ATCATTCCATGGGAGCTGCTCCTTCATGGCTGTGCATTTTTCACTTTTTACCCCGCTTCGCAGCACGGTTaGTCGCTGGTTAGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: IIPWELLLHGCAFFTFYPASQHG*SLVSLK
Trigger: CTTCAGGCTAACCAGCGACAAACCGTGCTGCGAAGC...GGGGTAAAAAGTGAAAAATGCACAGCCATGAAGGAGCAGCTCCCATGGAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGAGCAGCAGACACACTaGCCTCTCATACAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: TVLESLFPEGPWRIAHIREQQTH*PLIQVR
Trigger: CCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCTC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp AAGGAAGCTGGCCAATTACTGCTTGTGGGGGAAGAAACTCTGACTCAGACAGACTTCTCGTCAAAAGGGTaGGGCAGGTGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: KEAGQLLLVGEETLTQTDFSSKG*GRCSIS
Trigger: TGAGATGCTGCACCTGCCCAACCCTTTTGACGAGAA...GTCTGTCTGAGTCAGAGTTTCTTCCCCCACAAGCAGTAATTGGCCAGCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp GATTGTCAAGTCCTCGATAAAGTGCTTGTCTCTGTGGCTTCTGGATaGTTCGAGTCTGTCTATAGGAGAGACCACGTCGACTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: DCQVLDKVLVSVASG*FESVYRRDHVDWRV
Trigger: CACTCTCCAGTCGACGTGGTCTCTCCTATAGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp CCAAAGCCTTCAGCATCACCTTCAGAATTGTTGTTAAGTGGTTTCTaGCTCAGGGACGTCTTGTTTTGGTTCCACCCCAGGATGACAGGC +
Preference number: 5 (lower is better)
Translates to: PKPSASPSELLLSGF*LRDVLFWFHPRMTG
Trigger: GCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAAGGTGATGCTGAAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GAGCAAGGACAGCTTTGTGCGTCTCTGGAACTTTCACCGAGCTTTTaGAAGTCAGTGATTCGTCCTTCTCCTCATTGTTACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: EQGQLCASLELSPSF*KSVIRPSPHCYQED
Trigger: GTCCTCCTGGTAACAATGAGGAGAAGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGTATGGCAGTTTTTCCTaGGAGGGACATTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TVLESLFPEGPWRIAHIRYGSFS*EGHLAQ
Trigger: CTGGGCCAAATGTCCCTCCAAGGAAAAACTGCCATA...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp GATGGTGACGCTAAACGGATAACCATCTCACTCAGGGCTGTTGCCGACAGCATTGGAACTGTAGCTTCTTaGTGGAGAAGACTGACCTCT +
Preference number: 5 (lower is better)
Translates to: DGDAKRITISLRAVADSIGTVAS*WRRLTS
Trigger: AGAGGTCAGTCTTCTCCACAAAGAAGCTACAGTTCC...AATGCTGTCGGCAACAGCCCTGAGTGAGATGGTTATCCGTTTAGCGTCACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp TCTAGGGAAAGAGGTGGTCACTTCAAGGGAGAGGAATCTGCTGTGAGAGCATTATCCCAGCAGGAGTTCTaGGATCCCGAGGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SRERGGHFKGEESAVRALSQQEF*DPEEKV
Trigger: AACTTTCTCCTCGGGATCCAAGAACTCCTGCTGGGA...TAATGCTCTCACAGCAGATTCCTCTCCCTTGAAGTGACCACCTCTTTCCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp ATACCAGGACAGGGACATGAGGGTAACATGAGGAAGGTGGAGATATTTAACAATTCATCCACCGCTCCCTaGGGATGCCGTGGATGCTTG +
Preference number: 5 (lower is better)
Translates to: IPGQGHEGNMRKVEIFNNSSTAP*GCRGCL
Trigger: CAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGA...ATTGTTAAATATCTCCACCTTCCTCATGTTACCCTCATGTCCCTGTCCTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp TTATTCTTCCCAAGAATGTTTCTCTGGCGTTTGTTTCATTTCCTCTaGCCGGAGGGGTGGCTTCCAGGCCCGCTATCTCCTTTAGCACTT +
Preference number: 5 (lower is better)
Translates to: LFFPRMFLWRLFHFL*PEGWLPGPLSPLAL
Trigger: AAGTGCTAAAGGAGATAGCGGGCCTGGAAGCCACCCCTCCGGTCAGAGGAAATGAAACAAACGCCAGAGAAACATTCTTGGGAAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp ATTCCACTTTTTGCTCACAAAGAATCGAACAGGAGACAGGGTGTTTaGCCTGAAGTTAGCAAAGCGAGGCTGCCCTCTCATGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: IPLFAHKESNRRQGV*PEVSKARLPSHANL
Trigger: GAGATTCGCATGAGAGGGCAGCCTCGCTTTGCTAACTTCAGGGCAAACACCCTGTCTCCTGTTCGATTCTTTGTGAGCAAAAAGTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp ATCTTGCCATCCTTCTCCTGTAAACGGAGAGCAAGGACAGCTTTGTaGGTCTCTGGAACTTTCACCGAGCTTTTGGAAGTCAGTGATTCG +
Preference number: 5 (lower is better)
Translates to: ILPSFSCKRRARTAL*VSGTFTELLEVSDS
Trigger: CGAATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTCTCCGTTTACAGGAGAAGGATGGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 90 bp GAGTTTACCCACCACTTCCTCCCGATTGTCAAGTCCTCGATAAAGTaGTTGTCTCTGTGGCTTCTGGATGCTTCGAGTCTGTCTATAGGA +
Preference number: 5 (lower is better)
Translates to: EFTHHFLPIVKSSIK*LSLWLLDASSLSIG
Trigger: TCCTATAGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTGGTGGGTAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp TCAGAATTGTTGTTAAGTGGTTTCTGGCTCAGGGACGTCTTGTTTTaGTTCCACCCCAGGATGACAGGCTTGTTCTCACAGTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SELLLSGFWLRDVLF*FHPRMTGLFSQCSW
Trigger: CCAGGAACACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGGAGATGGGCATTTATTaGTCCTGGTGTCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: TVLESLFPEGPWRIAHIREMGIY*SWCQCR
Trigger: CCTGCATTGACACCAGGACAAATAAATGCCCATCTC...CCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CATGTTTGTGCAGCTGAACTGCTGTACAGTAAAGAAACACTCAGCCATTCACTGGGCTGGAGATACTGTTaGCTGCTGAAGGAACGGGTC +
Preference number: 5 (lower is better)
Translates to: HVCAAELLYSKETLSHSLGWRYC*LLKERV
Trigger: GACCCGTTCCTTCAGCAGCAAACAGTATCTCCAGCC...CAGTGAATGGCTGAGTGTTTCTTTACTGTACAGCAGTTCAGCTGCACAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp ACCTCTGTTGAGACAATTGTTAAACTCCTGCACCTTCTGCGCTACTaGGCCTCTTTTCCGCTCTGTGCTGTTGGAAAACCCTTTAGCTTG +
Preference number: 5 (lower is better)
Translates to: TSVETIVKLLHLLRY*ASFPLCAVGKPFSL
Trigger: CAAGCTAAAGGGTTTTCCAACAGCACAGAGCGGAAAAGAGGCTCAGTAGCGCAGAAGGTGCAGGAGTTTAACAATTGTCTCAACAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 90 bp GATGCTTCGAGTCTGTCTATAGGAGAGACCACGTCGACTGGAGAGTaGCTCCATACTGTTAGAAAATCTGTCCTTAACACTGAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: DASSLSIGETTSTGE*LHTVRKSVLNTESG
Trigger: GCCACTCTCAGTGTTAAGGACAGATTTTCTAACAGTATGGAGTCACTCTCCAGTCGACGTGGTCTCTCCTATAGACAGACTCGAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp GATCCCGAGGAGAAAGTTCTCCTGCCACTTCATGGGTCACACGACTaGAAGCTTTGTCAGGAATCTGTGATGGAAGATAGCTACTTTTCT +
Preference number: 5 (lower is better)
Translates to: DPEEKVLLPLHGSHD*KLCQESVMEDSYFS
Trigger: AGAAAAGTAGCTATCTTCCATCACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCTCGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp ATTAGTTTTCCCACTGCCGTGGGTGATGGGCGTCTTCTCAGAGTCTaGAGGAAGCTGGTGCAAGCTTTTAGGTTTAAAGCAATTCTTGCA +
Preference number: 5 (lower is better)
Translates to: ISFPTAVGDGRLLRV*RKLVQAFRFKAILA
Trigger: TGCAAGAATTGCTTTAAACCTAAAAGCTTGCACCAGCTTCCTCCAGACTCTGAGAAGACGCCCATCACCCACGGCAGTGGGAAAACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp ATCACTGCCAAAGCCTTCAGCATCACCTTCAGAATTGTTGTTAAGTaGTTTCTGGCTCAGGGACGTCTTGTTTTGGTTCCACCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: ITAKAFSITFRIVVK*FLAQGRLVLVPPQD
Trigger: ATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAAGGTGATGCTGAAGGCTTTGGCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp GGAAGAGGTGTATGCAGCTTGGTGAGATCATTCCATGGGAGCTGCTCCTTCATGGCATCACCTTCAGAATaGTTGTTAAGTGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRGVCSLVRSFHGSCSFMASPSE*LLSGFW
Trigger: CCAGAAACCACTTAACAACAATTCTGAAGGTGATGC...CATGAAGGAGCAGCTCCCATGGAATGATCTCACCAAGCTGCATACACCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACCCTCTGTTGAGACAATaGTTAAACTCCTGCACCTTC +
Preference number: 5 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHPLLRQ*LNSCTF
Trigger: GAAGGTGCAGGAGTTTAACAATTGTCTCAACAGAGG...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CAAAGAACAGTACTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACAGCATTCAGTCCTTCTaGGTCTGTCTTCTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: QRTVLESLFPEGPWRIAHSIQSF*VCLLSK
Trigger: TTTGGAGAGAAGACAGACCAAGAAGGACTGAATGCT...GTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAGTACTGTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGCATTGGAGGATGCCTTaGGCGTCAGAAATGAGGATG +
Preference number: 5 (lower is better)
Translates to: HICETIGMTNAPREGDCMHWRMP*ASEMRM
Trigger: CATCCTCATTTCTGACGCCAAAGGCATCCTCCAATG...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 90 bp TTTGCTCTTGCAGATCTTGACTGCATAGTTACTGAGTGGATCTTTTaGATACGAGGCAGTGTAGTAAACCGCATCTCCAGCTTCGCAGCA +
Preference number: 5 (lower is better)
Translates to: FALADLDCIVTEWIF*IRGSVVNRISSFAA
Trigger: TGCTGCGAAGCTGGAGATGCGGTTTACTACACTGCCTCGTATGCAAAAGATCCACTCAGTAACTATGCAGTCAAGATCTGCAAGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp GGCCCGCTATCTCCTTTAGCACTTCAGTTAGCCCGTTGTTGTTATTaGATATCTTCTGTGCACTGTCATTATTGGCACACTGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: GPLSPLALQLARCCY*ISSVHCHYWHTAED
Trigger: ATCCTCAGCAGTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp GTGTTTGCCCTGAGAGTCCTTCATGCTCCCGGTCATGCAACTGGGTaGGATCTTTCTTTCCAACGATCGTTTGTAGCAATCATTTATTCT +
Preference number: 5 (lower is better)
Translates to: VFALRVLHAPGHATG*DLSFQRSFVAIIYS
Trigger: AGAATAAATGATTGCTACAAACGATCGTTGGAAAGAAAGATCCCACCCAGTTGCATGACCGGGAGCATGAAGGACTCTCAGGGCAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 90 bp CTCCTTAGCTTTGCTCTTGCAGATCTTGACTGCATAGTTACTGAGTaGATCTTTTGCATACGAGGCAGTGTAGTAAACCGCATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSFALADLDCIVTE*IFCIRGSVVNRISS
Trigger: GCTGGAGATGCGGTTTACTACACTGCCTCGTATGCAAAAGATCCACTCAGTAACTATGCAGTCAAGATCTGCAAGAGCAAAGCTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp CTATGTAGGGTCCCCTCCTTTCACTGTATGCCAGAGCAAAGGCTAGTCCCCAGTGTGCTATCAGACACTTaGCTTTCAGTTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: LCRVPSFHCMPEQRLVPSVLSDT*LSVSIS
Trigger: AGAAATAGAAACTGAAAGCAAAGTGTCTGATAGCAC...ACTGGGGACTAGCCTTTGCTCTGGCATACAGTGAAAGGAGGGGACCCTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CTTGAAAGTCTGTTCCCTGAGGGCCCCTGGAGAATTGCACACATAAGGACATTAGTTGGCTTCGTCCAATaGGTAAAATGCCTTTGCAAC +
Preference number: 5 (lower is better)
Translates to: LESLFPEGPWRIAHIRTLVGFVQ*VKCLCN
Trigger: GTTGCAAAGGCATTTTACCAATTGGACGAAGCCAAC...TAATGTCCTTATGTGTGCAATTCTCCAGGGGCCCTCAGGGAACAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp CACATTTGTGAGACTATTGGGATGACAAATGCTCCAAGGGAAGGTGACTGCATGTCCTCGATAAAGTGCTaGTCTCTGTGGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: HICETIGMTNAPREGDCMSSIKC*SLWLLD
Trigger: ATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGA...CATGCAGTCACCTTCCCTTGGAGCATTTGTCATCCCAATAGTCTCACAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp TTAGCCCGTTGTTGTTATTGGATATCTTCTGTGCACTGTCATTATTaGCACACTGCTGAGGATCACTGCCAAAGCCTTCAGCATCACCTT +
Preference number: 5 (lower is better)
Translates to: LARCCYWISSVHCHY*HTAEDHCQSLQHHL
Trigger: AAGGTGATGCTGAAGGCTTTGGCAGTGATCCTCAGCAGTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGCACAACGTGGCTTCTTaGTTTCCTGTTTGTGACTCG +
Preference number: 5 (lower is better)
Translates to: SCQLFIISGLYFILLRHRHNVAS*FPVCDS
Trigger: CGAGTCACAAACAGGAAACAAAGAAGCCACGTTGTG...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 90 bp AGCTTTGTGCGTCTCTGGAACTTTCACCGAGCTTTTGGAAGTCAGTaGTTCGTCCTTCTCCTCATTGTTACCAGGAGGACTTTCAAAATT +
Preference number: 5 (lower is better)
Translates to: SFVRLWNFHRAFGSQ*FVLLLIVTRRTFKI
Trigger: AATTTTGAAAGTCCTCCTGGTAACAATGAGGAGAAGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 90 bp TTGTTATTGGATATCTTCTGTGCACTGTCATTATTGGCACACTGCTaGGGATCACTGCCAAAGCCTTCAGCATCACCTTCAGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LLLDIFCALSLLAHC*GSLPKPSASPSELL
Trigger: CAACAATTCTGAAGGTGATGCTGAAGGCTTTGGCAGTGATCCTCAGCAGTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATTTTGCAACAGGTTACTaGCATGGTAAGGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISCQLFIISGLYFILLRHFATGY*HGKGRK
Trigger: CTTCCTCCCCTTACCATGCAAGTAACCTGTTGCAAA...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp TCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCGGCTTCAGAGTGCAAAATaGATTCAGCTTCTGTTGATC +
Preference number: 5 (lower is better)
Translates to: SCQLFIISGLYFILLRHRLQSAK*IQLLLI
Trigger: GATCAACAGAAGCTGAATCAATTTTGCACTCTGAAG...CCGATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATCACAACGTGGCTTCTTaGTTTCCTGTTTGTGACTCG +
Preference number: 5 (lower is better)
Translates to: ISCQLFIISGLYFILLRHHNVAS*FPVCDS
Trigger: CGAGTCACAAACAGGAAACAAAGAAGCCACGTTGTG...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS-3UTR CAA 90 bp ATATCCTGCCAACTATTCATAATCTCTGGACTATATTTCATCCTGCTGAGGCATAGAGGTGGTGAAGATTaGAAAGAGATCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: ISCQLFIISGLYFILLRHRGGED*KEIFSG
Trigger: CCCCGAGAAGATCTCTTTCAAATCTTCACCACCTCT...ATGCCTCAGCAGGATGAAATATAGTCCAGAGATTATGAATAGTTGGCAGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 90 bp ACTCCGGGCATAGGATGGCTCATCATGGATGATAATGGGAAAAGGTaGCATCCCGGCATTGTTGTAACTATTAAATTTTATTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: TPGIGWLIMDDNGKR*HPGIVVTIKFYFRQ
Trigger: TTGTCTGAAATAAAATTTAATAGTTACAACAATGCCGGGATGCCACCTTTTCCCATTATCATCCATGATGAGCCATCCTATGCCCGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS-3UTR CAA 90 bp TGGAAACGTGCAGTGGCTATGACAATGTTATATGGACTGAATTTCGTTATTTTGAGCATTCAGTCCTTCTaGGTCTGTCTTCTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: WKRAVAMTMLYGLNFVILSIQSF*VCLLSK
Trigger: TTTGGAGAGAAGACAGACCAAGAAGGACTGAATGCT...CAAAATAACGAAATTCAGTCCATATAACATTGTCATAGCCACTGCACGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS TCA 90 bp CCCGGCATTGTTGTAACTATTAAATTTTATTTCAGACAAATTAGGTaGCTTAACAGGGATGGTTTTAGAGGAGATGTTTGTAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: PGIVVTIKFYFRQIR*LNRDGFRGDVCSRG
Trigger: CCCACGGCTACAAACATCTCCTCTAAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAAATAAAATTTAATAGTTACAACAATGCCGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp GCTAAGGTGGGGCAAGGGTCTGCAGGAGAAGGGCCCTaGGCAGCTCCCCCAGGTTGGTGCTGGACAAGCAGC +
Preference number: 6 (lower is better)
Translates to: AKVGQGSAGEGP*AAPPGWCWTSS
Trigger: GCTGCTTGTCCAGCACCAACCTGGGGGAGCTGCCCAGGGCCCTTCTCCTGCAGACCCTTGCCCCACCTTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp TGGGTGGCCGTGATGATCTCTGGGGCAAGGCGGGACTaGTCTCGGAGGATCTGGGGGTCCACCAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: WVAVMISGARRD*SRRIWGSTRWL
Trigger: GAGCCACCTGGTGGACCCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCCAGAGATCATCACGGCCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp GGAGAAGGGCCCTGGGCAGCTCCCCCAGGTTGGTGCTaGACAAGCAGCAAGTTCTCCAGGCGAAGATCGCAG +
Preference number: 6 (lower is better)
Translates to: GEGPWAAPPGWC*TSSKFSRRRSQ
Trigger: CTGCGATCTTCGCCTGGAGAACTTGCTGCTTGTCCAGCACCAACCTGGGGGAGCTGCCCAGGGCCCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp TCCTTTGGCCTCTGTGAACCAGTGATGGCGCTGGACTaGAGGGGGCGGCAGCATGTGGATGACTGTCCCGTC +
Preference number: 6 (lower is better)
Translates to: SFGLCEPVMALD*RGRQHVDDCPV
Trigger: GACGGGACAGTCATCCACATGCTGCCGCCCCCTCCAGTCCAGCGCCATCACTGGTTCACAGAGGCCAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp AGTACGGGGAGCGGAGAGGGATCCGAGGCAGATCTGTaGGCGTGTACTCCTTCTCCTTCAGCTCCGGGTTCT +
Preference number: 6 (lower is better)
Translates to: STGSGEGSEADL*ACTPSPSAPGS
Trigger: AGAACCCGGAGCTGAAGGAGAAGGAGTACACGCGCACAGATCTGCCTCGGATCCCTCTCCGCTCCCCGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp TCAGAAGGGTTGGGATTCAGGAGGCAGCTAGCAAGCTaGTGTAGACCCCAGGAGTACGGGGAGCGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: SEGLGFRRQLAS*CRPQEYGERRG
Trigger: CCCTCTCCGCTCCCCGTACTCCTGGGGTCTACAGCAGCTTGCTAGCTGCCTCCTGAATCCCAACCCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp GGAGGCGGTGGCTCACTCTGGGCGCTCGTCACTAATTaGGAGGGAGGAGAAGTCACTGGCTTCGTGGATGGA +
Preference number: 6 (lower is better)
Translates to: GGGGSLWALVTN*EGGEVTGFVDG
Trigger: TCCATCCACGAAGCCAGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGCCCAGAGTGAGCCACCGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp TATCTTGGGTCGCCCCAGGTGCTCGCTGGCCATGGCTaGCGACACATCCACAACGGTATATGGCTTACACAG +
Preference number: 6 (lower is better)
Translates to: YLGSPQVLAGHG*RHIHNGIWLTQ
Trigger: CTGTGTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp GAGGCGGTGGCTCACTCTGGGCGCTCGTCACTAATTTaGAGGGAGGAGAAGTCACTGGCTTCGTGGATGGAT +
Preference number: 6 (lower is better)
Translates to: EAVAHSGRSSLI*REEKSLASWMD
Trigger: ATCCATCCACGAAGCCAGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGCCCAGAGTGAGCCACCGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp ATCACACTTCTTATACTGGGTGGCCGTGATGATCTCTaGGGCAAGGCGGGACTGGTCTCGGAGGATCTGGGG +
Preference number: 6 (lower is better)
Translates to: ITLLILGGRDDL*GKAGLVSEDLG
Trigger: CCCCAGATCCTCCGAGACCAGTCCCGCCTTGCCCCAGAGATCATCACGGCCACCCAGTATAAGAAGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp TCTCGGGGGCCCCAGAGCAGACATTGGAGGATGCCTTaGGCGTCAGAAATGAGGATGCGCTCAGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: SRGPQSRHWRMP*ASEMRMRSEGL
Trigger: CAACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGGCCCCCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp CAGTGTTCCTGGATGCTTAGCTCGCCACACACGCTTTaGCCATCTGCCACCATCATAGTGGGCTTCACAGCG +
Preference number: 6 (lower is better)
Translates to: QCSWMLSSPHTL*PSATIIVGFTA
Trigger: CGCTGTGAAGCCCACTATGATGGTGGCAGATGGGCAAAGCGTGTGTGGCGAGCTAAGCATCCAGGAACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp GTAGAAGATGAACCTTTTATCTTGGGTCGCCCCAGGTaGTCGCTGGCCATGGCTGCCGACACATCCACAACG +
Preference number: 6 (lower is better)
Translates to: VEDEPFILGRPR*SLAMAADTSTT
Trigger: CGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCATCTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp CCAAAGGCAATGGCATCATCCACCGCTCCCTTGGGATaGCGTGGATGCTTGGGAGGTATCATAGCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: PKAMASSTAPLG*RGCLGGIIAAR
Trigger: TCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp CTTTTATCTTGGGTCGCCCCAGGTGCTCGCTGGCCATaGCTGCCGACACATCCACAACGGTATATGGCTTAC +
Preference number: 6 (lower is better)
Translates to: LLSWVAPGARWP*LPTHPQRYMAY
Trigger: GTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp GGCAATGGCATCATCCACCGCTCCCTTGGGATGCCGTaGATGCTTGGGAGGTATCATAGCTGCTCGAGATTG +
Preference number: 6 (lower is better)
Translates to: GNGIIHRSLGMP*MLGRYHSCSRL
Trigger: CAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp GCATCATCCACCGCTCCCTTGGGATGCCGTGGATGCTaGGGAGGTATCATAGCTGCTCGAGATTGTCCTAGG +
Preference number: 6 (lower is better)
Translates to: ASSTAPLGCRGC*GGIIAARDCPR
Trigger: CCTAGGACAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 90 bp AAGAGATCTTCTCGGGGGCCCCAGAGCAGACATTGGAGGATGCCTTaGGCGTCAGAAATGAGGATGCGCTCAGAAGGGTTGGGATTCAGG +
Preference number: 6 (lower is better)
Translates to: KRSSRGPQSRHWRMP*ASEMRMRSEGLGFR
Trigger: CCTGAATCCCAACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGGCCCCCGAGAAGATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 72 bp CTCCAGCTTCGCAGCACGGTTTGTCGCTGGTTAGCCTaGAGTCTGACCAGCTGTCTACTCCAAAGCGGAGTT +
Preference number: 6 (lower is better)
Translates to: LQLRSTVCRWLA*SLTSCLLQSGV
Trigger: AACTCCGCTTTGGAGTAGACAGCTGGTCAGACTTCAGGCTAACCAGCGACAAACCGTGCTGCGAAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp ATGGCATCATCCACCGCTCCCTTGGGATGCCGTGGATaGTTGGGAGGTATCATAGCTGCTCGAGATTGTCCT +
Preference number: 6 (lower is better)
Translates to: MASSTAPLGCRG*LGGIIAARDCP
Trigger: AGGACAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp CTTCCCCTCTTCTTCGCTGTCTTCAGTGCCATCCTCTaGCTTTTCAGGAGCATCAGGATCCTCCCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: LPLFFAVFSAIL*LFRSIRILPGK
Trigger: CTTCCCTGGGAGGATCCTGATGCTCCTGAAAAGGCAGAGGATGGCACTGAAGACAGCGAAGAAGAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp GCTGGCCATGGCTGCCGACACATCCACAACGGTATATaGCTTACACAGCGGCTGTTCCAGATTTACCACACG +
Preference number: 6 (lower is better)
Translates to: AGHGCRHIHNGI*LTQRLFQIYHT
Trigger: CGTGTGGTAAATCTGGAACAGCCGCTGTGTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp ATGAACCTTTTATCTTGGGTCGCCCCAGGTGCTCGCTaGCCATGGCTGCCGACACATCCACAACGGTATATG +
Preference number: 6 (lower is better)
Translates to: MNLLSWVAPGAR*PWLPTHPQRYM
Trigger: CATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp GCCCCAGCCTTGCTTTGGTCCACACTGAGGTGGCCTTaGTCAGGGTCACACCTGTACATGAAGACTATAGCA +
Preference number: 6 (lower is better)
Translates to: APALLWSTLRWP*SGSHLYMKTIA
Trigger: TGCTATAGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TTCTCTGCCCCAGCCTTGCTTTGGTCCACACTGAGGTaGCCTTGGTCAGGGTCACACCTGTACATGAAGACT +
Preference number: 6 (lower is better)
Translates to: FSAPALLWSTLR*PWSGSHLYMKT
Trigger: AGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp ACTGGAGAGTTTGGAGTAGAAGATGAACCTTTTATCTaGGGTCGCCCCAGGTGCTCGCTGGCCATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: TGEFGVEDEPFI*GRPRCSLAMAA
Trigger: GGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCATCTTCTACTCCAAACTCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp TGCCCCAGCCTTGCTTTGGTCCACACTGAGGTGGCCTaGGTCAGGGTCACACCTGTACATGAAGACTATAGC +
Preference number: 6 (lower is better)
Translates to: CPSLALVHTEVA*VRVTPVHEDYS
Trigger: GCTATAGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp GGTGATGTAACTGGAGAGTTTGGAGTAGAAGATGAACCTTTTATCTaGGGTCGCCCCAGGTGCTCGCTGGCCATGGCTGCCGACACATCC +
Preference number: 6 (lower is better)
Translates to: GDVTGEFGVEDEPFI*GRPRCSLAMAADTS
Trigger: GGATGTGTCGGCAGCCATGGCCAGCGAGCACCTGGGGCGACCCAAGATAAAAGGTTCATCTTCTACTCCAAACTCTCCAGTTACATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp TCCTTTCTCTGCCCCAGCCTTGCTTTGGTCCACACTGAGGTGGCCTaGGTCAGGGTCACACCTGTACATGAAGACTATAGCAGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SFLCPSLALVHTEVA*VRVTPVHEDYSRLL
Trigger: GAGAAGCCTGCTATAGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAAGCAAGGCTGGGGCAGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp TGGTCTGTCTTCTCTCCAAAGGCAATGGCATCATCCACCGCTCCCTaGGGATGCCGTGGATGCTTGGGAGGTATCATAGCTGCTCGAGAT +
Preference number: 6 (lower is better)
Translates to: WSVFSPKAMASSTAP*GCRGCLGGIIAARD
Trigger: ATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGAAGACAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 72 bp CCAAGAATGTTTCTCTGGCGTTTGTTTCATTTCCTCTaGCCGGAGGGGTGGCTTCCAGGCCCGCTATCTCCT +
Preference number: 6 (lower is better)
Translates to: PRMFLWRLFHFL*PEGWLPGPLSP
Trigger: AGGAGATAGCGGGCCTGGAAGCCACCCCTCCGGTCAGAGGAAATGAAACAAACGCCAGAGAAACATTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp AGAGCAGACATTGGAGGATGCCTTTGGCGTCAGAAATaGGGATGCGCTCAGAAGGGTTGGGATTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RADIGGCLWRQK*GCAQKGWDSGG
Trigger: GCCTCCTGAATCCCAACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp CCCACTGCCGTGGGTGATGGGCGTCTTCTCAGAGTCTaGAGGAAGCTGGTGCAAGCTTTTAGGTTTAAAGCA +
Preference number: 6 (lower is better)
Translates to: PTAVGDGRLLRV*RKLVQAFRFKA
Trigger: TGCTTTAAACCTAAAAGCTTGCACCAGCTTCCTCCAGACTCTGAGAAGACGCCCATCACCCACGGCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp ATGTTTGTAGCCGTGGGTGAAGTGGGCGCCGACTTATaGCAGTTTTTCCTTGGAGGGACATTTGGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: MFVAVGEVGADL*QFFLGGTFGPG
Trigger: ACCTGGGCCAAATGTCCCTCCAAGGAAAAACTGCCATAAGTCGGCGCCCACTTCACCCACGGCTACAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp CTTGGATCCCGAGGAGAAAGTTCTCCTGCCACTTCATaGGTCACACGATCACACAGTTCCCCATTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: LGSRGESSPATS*VTRSHSSPLRD
Trigger: GTCCCTCAATGGGGAACTGTGTGATCGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCTCGGGATCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188142.7
CDS CAA 72 bp TTCTCTCCAAAGGCAATGGCATCATCCACCGCTCCCTaGGGATGCCGTGGATGCTTGGGAGGTATCATAGCT +
Preference number: 6 (lower is better)
Translates to: FSPKAMASSTAP*GCRGCLGGIIA
Trigger: AGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTGGATGATGCCATTGCCTTTGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp TTGAAAGAGATCTTCTCGGGGGCCCCAGAGCAGACATaGGAGGATGCCTTTGGCGTCAGAAATGAGGATGCG +
Preference number: 6 (lower is better)
Translates to: LKEIFSGAPEQT*EDAFGVRNEDA
Trigger: CGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGGCCCCCGAGAAGATCTCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 90 bp GGTGAAGATTTGAAAGAGATCTTCTCGGGGGCCCCAGAGCAGACATaGGAGGATGCCTTTGGCGTCAGAAATGAGGATGCGCTCAGAAGG +
Preference number: 6 (lower is better)
Translates to: GEDLKEIFSGAPEQT*EDAFGVRNEDALRR
Trigger: CCTTCTGAGCGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCTGGGGCCCCCGAGAAGATCTCTTTCAAATCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 90 bp CTGTCCAGGGACTTCTCCGCGAACTTGATCATCAGCAGGGTTCGCTaGATGTCTAACCAGTTTTGGAGCAGAGCGTTCTTCTGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: LSRDFSANLIISRVR*MSNQFWSRAFFCAR
Trigger: CCTCGCACAGAAGAACGCTCTGCTCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGATGATCAAGTTCGCGGAGAAGTCCCTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 72 bp AAGTTGCCCGTGCTCCTGACTCGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCCCACTGCCGTGGGTGATG +
Preference number: 6 (lower is better)
Translates to: KLPVLLTRWLLL*LALVFPLPWVM
Trigger: CATCACCCACGGCAGTGGGAAAACTAATGCCAATCACAGTAACAACCACCGAGTCAGGAGCACGGGCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp GGCTCAGGGACGTCTTGTTTTGGTTCCACCCCAGGATaGCAGGCTTGTTCTCACAGTGTTCCTGGATGCTTA +
Preference number: 6 (lower is better)
Translates to: GSGTSCFGSTPG*QACSHSVPGCL
Trigger: TAAGCATCCAGGAACACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp TTCTTCTGTGCGAGGGTTGCAGAGGTGGTGAAGATTTaGAAGAGATCTTCTCGGGGGCCCCAGAGCAGACAT +
Preference number: 6 (lower is better)
Translates to: FFCARVAEVVKI*KRSSRGPQSRH
Trigger: ATGTCTGCTCTGGGGCCCCCGAGAAGATCTCTTTCAAATCTTCACCACCTCTGCAACCCTCGCACAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp AGGAGGAGCCTGGTGATGTGCAGTCAGATGATATTGTaGTCTGAACGCTTCCTTGACCATAGGAGACCCCAG +
Preference number: 6 (lower is better)
Translates to: RRSLVMCSQMIL*SERFLDHRRPQ
Trigger: CTGGGGTCTCCTATGGTCAAGGAAGCGTTCAGAGCACAATATCATCTGACTGCACATCACCAGGCTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TGCCCTGAGAGTCCTTCATGCTCCCGGTCATGCAACTaGGTGGGATCTTTCTTTCCAACGATCGTTTGTAGC +
Preference number: 6 (lower is better)
Translates to: CPESPSCSRSCN*VGSFFPTIVCS
Trigger: GCTACAAACGATCGTTGGAAAGAAAGATCCCACCCAGTTGCATGACCGGGAGCATGAAGGACTCTCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp TGGGGGTGGTGTGGGTTGGGAAGCATTCAGTCCTTCTaGGTCTGTCTTCTCTCCAAAGGCAATGGCATCATC +
Preference number: 6 (lower is better)
Translates to: WGWCGLGSIQSF*VCLLSKGNGII
Trigger: GATGATGCCATTGCCTTTGGAGAGAAGACAGACCAAGAAGGACTGAATGCTTCCCAACCCACACCACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 90 bp AGTGAGATGGGGAACCTCCCTGGTGATGACCACAACGTGGCTTCTTaGTTTCCTGTTTGTGACTCGTTGGTTCTCTTTCTGGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: SEMGNLPGDDHNVAS*FPVCDSLVLFLGWL
Trigger: GAGCCATCCCAGAAAGAGAACCAACGAGTCACAAACAGGAAACAAAGAAGCCACGTTGTGGTCATCACCAGGGAGGTTCCCCATCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 72 bp AGGGATGGTTTTAGAGGAGATGTTTGTAGCCGTGGGTaGAGTGGGCGCCGACTTATGGCAGTTTTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RDGFRGDVCSRG*SGRRLMAVFPW
Trigger: CCAAGGAAAAACTGCCATAAGTCGGCGCCCACTTCACCCACGGCTACAAACATCTCCTCTAAAACCATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp GCCAACAGCTCTTCATCGCTCTCATCCCAGCTCTCATaGTCCTCCTCCATGTTACTGAAAAGCACATCTTCC +
Preference number: 6 (lower is better)
Translates to: ANSSSSLSSQLS*SSSMLLKSTSS
Trigger: GGAAGATGTGCTTTTCAGTAACATGGAGGAGGAGCATGAGAGCTGGGATGAGAGCGATGAAGAGCTGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp GTCCTCGATAAAGTGCTTGTCTCTGTGGCTTCTGGATaGTTCGAGTCTGTCTATAGGAGAGACCACGTCGAC +
Preference number: 6 (lower is better)
Translates to: VLDKVLVSVASG*FESVYRRDHVD
Trigger: GTCGACGTGGTCTCTCCTATAGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp CACCACTTCCTCCCGATTGTCAAGTCCTCGATAAAGTaGTTGTCTCTGTGGCTTCTGGATGCTTCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: HHFLPIVKSSIK*LSLWLLDASSL
Trigger: CAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp AAGTTTCTGCCTTCCCCTCTTCTTCGCTGTCTTCAGTaGCATCCTCTGCCTTTTCAGGAGCATCAGGATCCT +
Preference number: 6 (lower is better)
Translates to: KFLPSPLLRCLQ*HPLPFQEHQDP
Trigger: AGGATCCTGATGCTCCTGAAAAGGCAGAGGATGGCACTGAAGACAGCGAAGAAGAGGGGAAGGCAGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp CTTGGATCCCGAGGAGAAAGTTCTCCTGCCACTTCATaGGTCACACGACTGCAAGCTTTGTCAGGAATCTGT +
Preference number: 6 (lower is better)
Translates to: LGSRGESSPATS*VTRLQALSGIC
Trigger: ACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCATGAAGTGGCAGGAGAACTTTCTCCTCGGGATCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TGGCTTTCTGAAGGTCTTTGGAGATGGGCTCGGTATTaGCTCGTATCATTTTCTTTGGCAGTGGGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: WLSEGLWRWARY*LVSFSLAVGVV
Trigger: CACCACCCCCACTGCCAAAGAAAATGATACGAGCCAATACCGAGCCCATCTCCAAAGACCTTCAGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp ATCATCAGCAGGGTTCGCTTGATGTCTAACCAGTTTTaGAGCAGAGCGTTCTTCTGTGCGAGGGTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: IISRVRLMSNQF*SRAFFCARVAE
Trigger: CTCTGCAACCCTCGCACAGAAGAACGCTCTGCTCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS TCA 72 bp GAGACAATTGTTAAACTCCTGCACCTTCTGCGCTACTaGGCCTCTTTTCCGCTCTGTGCTGTTGGAAAACCC +
Preference number: 6 (lower is better)
Translates to: ETIVKLLHLLRY*ASFPLCAVGKP
Trigger: GGGTTTTCCAACAGCACAGAGCGGAAAAGAGGCTCAGTAGCGCAGAAGGTGCAGGAGTTTAACAATTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp TTAGCCATGACGCAAAGACTGCTTTCCATGGCTTTCTaGAGGTCTTTGGAGATGGGCTCGGTATTGGCTCGT +
Preference number: 6 (lower is better)
Translates to: LAMTQRLLSMAF*RSLEMGSVLAR
Trigger: ACGAGCCAATACCGAGCCCATCTCCAAAGACCTTCAGAAAGCCATGGAAAGCAGTCTTTGCGTCATGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp TTTGCTCACAAAGAATCGAACAGGAGACAGGGTGTTTaGCCTGAAGTTAGCAAAGCGAGGCTGCCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: FAHKESNRRQGV*PEVSKARLPSH
Trigger: ATGAGAGGGCAGCCTCGCTTTGCTAACTTCAGGGCAAACACCCTGTCTCCTGTTCGATTCTTTGTGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp CCTCTGTTGAGACAATTGTTAAACTCCTGCACCTTCTaGGCTACTGAGCCTCTTTTCCGCTCTGTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: PLLRQLLNSCTF*ATEPLFRSVLL
Trigger: CAACAGCACAGAGCGGAAAAGAGGCTCAGTAGCGCAGAAGGTGCAGGAGTTTAACAATTGTCTCAACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TTGTTAAGTGGTTTCTGGCTCAGGGACGTCTTGTTTTaGTTCCACCCCAGGATGACAGGCTTGTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: LLSGFWLRDVLF*FHPRMTGLFSQ
Trigger: CTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp CTGAGAGTCCTTCATGCTCCCGGTCATGCAACTGGGTaGGATCTTTCTTTCCAACGATCGTTTGTAGCAATC +
Preference number: 6 (lower is better)
Translates to: LRVLHAPGHATG*DLSFQRSFVAI
Trigger: GATTGCTACAAACGATCGTTGGAAAGAAAGATCCCACCCAGTTGCATGACCGGGAGCATGAAGGACTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp GTTGTTAAGTGGTTTCTGGCTCAGGGACGTCTTGTTTaGGTTCCACCCCAGGATGACAGGCTTGTTCTCACA +
Preference number: 6 (lower is better)
Translates to: VVKWFLAQGRLV*VPPQDDRLVLT
Trigger: TGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp CCATCCTTCTCCTGTAAACGGAGAGCAAGGACAGCTTaGTGCGTCTCTGGAACTTTCACCGAGCTTTTGGAA +
Preference number: 6 (lower is better)
Translates to: PSFSCKRRARTA*CVSGTFTELLE
Trigger: TTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTCTCCGTTTACAGGAGAAGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp CACTTCCTCCCGATTGTCAAGTCCTCGATAAAGTGCTaGTCTCTGTGGCTTCTGGATGCTTCGAGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: HFLPIVKSSIKC*SLWLLDASSLS
Trigger: AGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp GGGAACCTCCCTGGTGATGACCACAACGTGGCTTCTTaGTTTCCTGTTTGTGACTCGTTGGTTCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: GNLPGDDHNVAS*FPVCDSLVLFL
Trigger: CAGAAAGAGAACCAACGAGTCACAAACAGGAAACAAAGAAGCCACGTTGTGGTCATCACCAGGGAGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp GACTTCTCCGCGAACTTGATCATCAGCAGGGTTCGCTaGATGTCTAACCAGTTTTGGAGCAGAGCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: DFSANLIISRVR*MSNQFWSRAFF
Trigger: GAAGAACGCTCTGCTCCAAAACTGGTTAGACATCAAGCGAACCCTGCTGATGATCAAGTTCGCGGAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 90 bp GCAATCTTGCCATCCTTCTCCTGTAAACGGAGAGCAAGGACAGCTTaGTGCGTCTCTGGAACTTTCACCGAGCTTTTGGAAGTCAGTGAT +
Preference number: 6 (lower is better)
Translates to: AILPSFSCKRRARTA*CVSGTFTELLEVSD
Trigger: ATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTCTCCGTTTACAGGAGAAGGATGGCAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp TTTACCCACCACTTCCTCCCGATTGTCAAGTCCTCGATAAAGTGCTaGTCTCTGTGGCTTCTGGATGCTTCGAGTCTGTCTATAGGAGAG +
Preference number: 6 (lower is better)
Translates to: FTHHFLPIVKSSIKC*SLWLLDASSLSIGE
Trigger: CTCTCCTATAGACAGACTCGAAGCATCCAGAAGCCACAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTGGTGGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp CTTTGCTCTCTGGCTTCTCAGTATGTACTGCAATCTTaGCATCCTTCTCCTGTAAACGGAGAGCAAGGACAG +
Preference number: 6 (lower is better)
Translates to: LCSLASQYVLQS*HPSPVNGEQGQ
Trigger: CTGTCCTTGCTCTCCGTTTACAGGAGAAGGATGGCAAGATTGCAGTACATACTGAGAAGCCAGAGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS GCA 72 bp GAGAAAGTTCTCCTGCCACTTCATGGGTCACACGACTaGAAGCTTTGTCAGGAATCTGTGATGGAAGATAGC +
Preference number: 6 (lower is better)
Translates to: EKVLLPLHGSHD*KLCQESVMEDS
Trigger: GCTATCTTCCATCACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCATGAAGTGGCAGGAGAACTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TCAGCATCACCTTCAGAATTGTTGTTAAGTGGTTTCTaGCTCAGGGACGTCTTGTTTTGGTTCCACCCCAGG +
Preference number: 6 (lower is better)
Translates to: SASPSELLLSGF*LRDVLFWFHPR
Trigger: CCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAAGGTGATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp GAATTGTTGTTAAGTGGTTTCTGGCTCAGGGACGTCTaGTTTTGGTTCCACCCCAGGATGACAGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: ELLLSGFWLRDV*FWFHPRMTGLF
Trigger: GAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp TTCAGAATTGTTGTTAAGTGGTTTCTGGCTCAGGGACGTCTTGTTTaGGTTCCACCCCAGGATGACAGGCTTGTTCTCACAGTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: FRIVVKWFLAQGRLV*VPPQDDRLVLTVFL
Trigger: CAGGAACACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp TCACCTTCAGAATTGTTGTTAAGTGGTTTCTGGCTCAGGGACGTCTaGTTTTGGTTCCACCCCAGGATGACAGGCTTGTTCTCACAGTGT +
Preference number: 6 (lower is better)
Translates to: SPSELLLSGFWLRDV*FWFHPRMTGLFSQC
Trigger: ACACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp GCTTCCAGGCCCGCTATCTCCTTTAGCACTTCAGTTAGCCCGTTGTaGTTATTGGATATCTTCTGTGCACTGTCATTATTGGCACACTGC +
Preference number: 6 (lower is better)
Translates to: ASRPAISFSTSVSPL*LLDIFCALSLLAHC
Trigger: GCAGTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGGCCTGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp GTGGCTTCCAGGCCCGCTATCTCCTTTAGCACTTCAGTTAGCCCGTaGTTGTTATTGGATATCTTCTGTGCACTGTCATTATTGGCACAC +
Preference number: 6 (lower is better)
Translates to: VASRPAISFSTSVSP*LLLDIFCALSLLAH
Trigger: GTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGGCCTGGAAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp CGTCAAAAGGGTTGGGCAGGTGCAGCATCTCATAGATaGGAATGCCCGTCTGGAATTCATCACACTTCTTAT +
Preference number: 6 (lower is better)
Translates to: RQKGWAGAASHR*ECPSGIHHTSY
Trigger: ATAAGAAGTGTGATGAATTCCAGACGGGCATTCTCATCTATGAGATGCTGCACCTGCCCAACCCTTTTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS GCA 72 bp GCAGATCTTGACTGCATAGTTACTGAGTGGATCTTTTaGATACGAGGCAGTGTAGTAAACCGCATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ADLDCIVTEWIF*IRGSVVNRISS
Trigger: GCTGGAGATGCGGTTTACTACACTGCCTCGTATGCAAAAGATCCACTCAGTAACTATGCAGTCAAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CCA 72 bp CAGCTTTGTGCGTCTCTGGAACTTTCACCGAGCTTTTaGAAGTCAGTGATTCGTCCTTCTCCTCATTGTTAC +
Preference number: 6 (lower is better)
Translates to: QLCASLELSPSF*KSVIRPSPHCY
Trigger: GTAACAATGAGGAGAAGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp CTTTGTTTCCTGTTTGTGACTCGTTGGTTCTCTTTCTaGGATGGCTCTGTTTCAGAGCAGGGCTCAGGATTT +
Preference number: 6 (lower is better)
Translates to: LCFLFVTRWFSF*DGSVSEQGSGF
Trigger: AAATCCTGAGCCCTGCTCTGAAACAGAGCCATCCCAGAAAGAGAACCAACGAGTCACAAACAGGAAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp TCTGTTGATCGGGTAGGACTGGTTGGCTTCGTCCAATaGGTAAAATGCCTTTGCAACAGGTTACTTGCATGG +
Preference number: 6 (lower is better)
Translates to: SVDRVGLVGFVQ*VKCLCNRLLAW
Trigger: CCATGCAAGTAACCTGTTGCAAAGGCATTTTACCAATTGGACGAAGCCAACCAGTCCTACCCGATCAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp TCACTGCCAAAGCCTTCAGCATCACCTTCAGAATTGTaGTTAAGTGGTTTCTGGCTCAGGGACGTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: SLPKPSASPSEL*LSGFWLRDVLF
Trigger: AAACAAGACGTCCCTGAGCCAGAAACCACTTAACAACAATTCTGAAGGTGATGCTGAAGGCTTTGGCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp ATTCTCTGCAGAGACTTATTCCGTAAGGGGATAGTATTCCACTTTTaGCTCACAAAGAATCGAACAGGAGACAGGGTGTTTGCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: ILCRDLFRKGIVFHF*LTKNRTGDRVFALK
Trigger: CTTCAGGGCAAACACCCTGTCTCCTGTTCGATTCTTTGTGAGCAAAAAGTGGAATACTATCCCCTTACGGAATAAGTCTCTGCAGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS TCA 72 bp ATGGGTCACACGACTGCAAGCTTTGTCAGGAATCTGTaGTGGAAGATAGCTACTTTTCTTCTCTTCCGAGTT +
Preference number: 6 (lower is better)
Translates to: MGHTTASFVRNL*WKIATFLLFRV
Trigger: AACTCGGAAGAGAAGAAAAGTAGCTATCTTCCATCACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp TTTGCTCTTGCAGATCTTGACTGCATAGTTACTGAGTaGATCTTTTGCATACGAGGCAGTGTAGTAAACCGC +
Preference number: 6 (lower is better)
Translates to: FALADLDCIVTE*IFCIRGSVVNR
Trigger: GCGGTTTACTACACTGCCTCGTATGCAAAAGATCCACTCAGTAACTATGCAGTCAAGATCTGCAAGAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061552.15
ENSMUST00000188142.7
CDS CAA 72 bp AGGCCCGCTATCTCCTTTAGCACTTCAGTTAGCCCGTaGTTGTTATTGGATATCTTCTGTGCACTGTCATTA +
Preference number: 6 (lower is better)
Translates to: RPAISFSTSVSP*LLLDIFCALSL
Trigger: TAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp GTCCACACTTCCTGGTATCGGATTGCACTGGATTTTTaGAGATGGGCATTTATTTGTCCTGGTGTCAATGCA +
Preference number: 6 (lower is better)
Translates to: VHTSWYRIALDF*RWAFICPGVNA
Trigger: TGCATTGACACCAGGACAAATAAATGCCCATCTCAAAAAATCCAGTGCAATCCGATACCAGGAAGTGTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp GAGTCTGGAGGAAGCTGGTGCAAGCTTTTAGGTTTAAAGCAATTCTaGCATTCGCCAGGTTTCCAAACGTGTTCAGTAAAGGTGTTACAA +
Preference number: 6 (lower is better)
Translates to: ESGGSWCKLLGLKQF*HSPGFQTCSVKVLQ
Trigger: TTGTAACACCTTTACTGAACACGTTTGGAAACCTGGCGAATGCAAGAATTGCTTTAAACCTAAAAGCTTGCACCAGCTTCCTCCAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp GGAAGCTGGTGCAAGCTTTTAGGTTTAAAGCAATTCTaGCATTCGCCAGGTTTCCAAACGTGTTCAGTAAAG +
Preference number: 6 (lower is better)
Translates to: GSWCKLLGLKQF*HSPGFQTCSVK
Trigger: CTTTACTGAACACGTTTGGAAACCTGGCGAATGCAAGAATTGCTTTAAACCTAAAAGCTTGCACCAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp CCCGCTATCTCCTTTAGCACTTCAGTTAGCCCGTTGTaGTTATTGGATATCTTCTGTGCACTGTCATTATTG +
Preference number: 6 (lower is better)
Translates to: PAISFSTSVSPL*LLDIFCALSLL
Trigger: CAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 90 bp ACTTTCACCGAGCTTTTGGAAGTCAGTGATTCGTCCTTCTCCTCATaGTTACCAGGAGGACTTTCAAAATTAGACTCAGTTTCTGCTATG +
Preference number: 6 (lower is better)
Translates to: TFTELLEVSDSSFSS*LPGGLSKLDSVSAM
Trigger: CATAGCAGAAACTGAGTCTAATTTTGAAAGTCCTCCTGGTAACAATGAGGAGAAGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp ATCTCCTTTAGCACTTCAGTTAGCCCGTTGTTGTTATaGGATATCTTCTGTGCACTGTCATTATTGGCACAC +
Preference number: 6 (lower is better)
Translates to: ISFSTSVSPLLL*DIFCALSLLAH
Trigger: GTGTGCCAATAATGACAGTGCACAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CAA 72 bp AGAGACTTATTCCGTAAGGGGATAGTATTCCACTTTTaGCTCACAAAGAATCGAACAGGAGACAGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RDLFRKGIVFHF*LTKNRTGDRVF
Trigger: AAACACCCTGTCTCCTGTTCGATTCTTTGTGAGCAAAAAGTGGAATACTATCCCCTTACGGAATAAGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15
CDS CCA 72 bp ATAGGATGGCTCATCATGGATGATAATGGGAAAAGGTaGCATCCCGGCATTGTTGTAACTATTAAATTTTAT +
Preference number: 6 (lower is better)
Translates to: IGWLIMDDNGKR*HPGIVVTIKFY
Trigger: ATAAAATTTAATAGTTACAACAATGCCGGGATGCCACCTTTTCCCATTATCATCCATGATGAGCCATCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061552.15