Pregenerated sensors for PEA15A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013698Ensembl transcript IDs: ENSMUST00000013842.12, ENSMUST00000111247.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCTGTCTCCTCCCTCTTCCATAAGGGAAGCGCCGTCTCACTCCTaGTCCCATGGAACACCCCAGAAGGAAGGATGTTACCCAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: TLSPPSSIREAPSHS*SHGTPQKEGCYPEF Trigger: GAACTCTGGGTAACATCCTTCCTTCTGGGGTGTTCCATGGGAGCAGGAGTGAGACGGCGCTTCCCTTATGGAAGAGGGAGGAGACAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR CCA 90 bp | AGCACGGTCAAGATGGGGAAGGGCATCTTGGGACAGGGAGGAGGCTaGGTTCACTCACTGCACTCTAGTGACTTGACTGTGTGGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: STVKMGKGILGQGGG*VHSLHSSDLTVWHP Trigger: TGGATGCCACACAGTCAAGTCACTAGAGTGCAGTGAGTGAACCCAGCCTCCTCCCTGTCCCAAGATGCCCTTCCCCATCTTGACCGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR CCA 90 bp | TCCTCCCTCTTCCATAAGGGAAGCGCCGTCTCACTCCTGCTCCCATaGAACACCCCAGAAGGAAGGATGTTACCCAGAGTTCCTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSLFHKGSAVSLLLP*NTPEGRMLPRVPFS Trigger: GGAGAAAGGAACTCTGGGTAACATCCTTCCTTCTGGGGTGTTCCATGGGAGCAGGAGTGAGACGGCGCTTCCCTTATGGAAGAGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR GCA 90 bp | TACGGTAGAGTCAGTCACCTTTATTCCAGGGTTAGAACAAGGCTGTaGACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: YGRVSHLYSRVRTRL*TLQTEEHRLGATSQ Trigger: CTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTTGTTCTAACCCTGGAATAAAGGTGACTGACTCTACCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR CCA 90 bp | GGAGGAGGCTGGGTTCACTCACTGCACTCTAGTGACTTGACTGTGTaGCATCCACAAACCCAAATGAGAAAGGTTACCAGTCCCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GGGWVHSLHSSDLTV*HPQTQMRKVTSPFL Trigger: CAGGAAGGGACTGGTAACCTTTCTCATTTGGGTTTGTGGATGCCACACAGTCAAGTCACTAGAGTGCAGTGAGTGAACCCAGCCTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGCTAGACAGACAGACAGCCAGAGCGTGCGCACACGCACACACACGCCCTAGCCCCTCCCATTaGGGATGGGGAAGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LDELDRQTARACAHAHTRPSPSH*GWGREW Trigger: CCACTCCCTTCCCCATCCTCAATGGGAGGGGCTAGG...GCGTGTGTGTGCGTGTGCGCACGCTCTGGCTGTCTGTCTGTCTAGCTCATCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAAGGTGTCTGCAGCAGTaGCCAGAGGAGATGGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTARCLQQ*PEEMGN Trigger: ATTGCCCATCTCCTCTGGCCACTGCTGCAGACACCT...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAAGTCCCTTCCTGGATTaGATCAGGGTGGTGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTASPFLD*IRVVVS Trigger: ACTGACCACCACCCTGATTCAATCCAGGAAGGGACT...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCACAGGTGGAGGTTGAGTaGCCTCTTTACCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTAQVEVE*PLYLPS Trigger: GGAAGGAAGGTAAAGAGGCCACTCAACCTCCACCTG...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAGGAACAGCAGGAAGCTaGCTTCTAACCAGTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTAGTAGS*LLTSPA Trigger: TGCTGGACTGGTTAGAAGCCAGCTTCCTGCTGTTCC...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCATTACAGAGAAGCTTCTaGGAAGCACCCTGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTALQRSF*EAPCLL Trigger: GAGGAGACAGGGTGCTTCTCAGAAGCTTCTCTGTAA...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCATGCTGGCTTCTCCATTaGGGTTTGATCTTTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTACWLLH*GLIFGT Trigger: GGTCCCAAAGATCAAACCCCAATGGAGAAGCCAGCA...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCATTACCAGTCCCTTCCTaGATTGAATCAGGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTALPVPS*IESGWW Trigger: CCACCACCCTGATTCAATCCAGGAAGGGACTGGTAA...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAATCCACAAACCCAAATaGGAAAGGTTACCAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTAIHKPK*ERLPVP Trigger: AGGGACTGGTAACCTTTCTCATTTGGGTTTGTGGAT...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAAATGCAGGTCCTTTCTaGTTCCATAAAGATGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTANAGPF*FHKDVG Trigger: CCCCACATCTTTATGGAAGCAGAAAGGACCTGCATT...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAGGAGAGTGGAAAGGTTaGCTACAATACTCTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTAGEWKG*LQYSVG Trigger: ACCTACAGAGTATTGTAGGCAACCTTTCCACTCTCC...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCATGGATTGAATCAGGGTaGTGGTCAGTGCAAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KAVHAADRGAQARSNLTAWIESG*WSVQRK Trigger: TTTCCTTTGCACTGACCACCACCCTGATTCAATCCA...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACGGATGGGGAAGGGAGTaGTCTGATGAAGATCCAACC | + |
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Preference number: 2 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNGWGRE*SDEDPT Trigger: GGTTGGATCTTCATCAGACCACTCCCTTCCCCATCC...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACGGAACAGCAGGAAGCTaGCTTCTAACCAGTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNGTAGS*LLTSPA Trigger: TGCTGGACTGGTTAGAAGCCAGCTTCCTGCTGTTCC...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACCTGAGGAGCAGAAAGTaGGCCTGTCTCTGCCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: IYMYTQLARSRWGRASWDLRSRK*ACLCLR Trigger: ACGCAGGCAGAGACAGGCCCACTTTCTGCTCCTCAG...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTTCTAACCAGTCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTGGAGGAGGAACTAGATaGGCTAGACAGACAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: LASNQSSIEIQTLSPGFSGGGTR*ARQTDS Trigger: GCTGTCTGTCTGTCTAGCTCATCTAGTTCCTCCTCC...AGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGACTGGTTAGAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACCAGGTGGAGGTTGAGTaGCCTCTTTACCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IYMYTQLARSRWGRASWDQVEVE*PLYLPS Trigger: GGAAGGAAGGTAAAGAGGCCACTCAACCTCCACCTG...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGTCCAGAGCAGAAGGTTaGGGGACAGTAAATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SFLPPSCTRISCLKGDARSRAEG*GTVNAG Trigger: GCCAGCATTTACTGTCCCCCAACCTTCTGCTCTGGA...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | TACCTTCCTTCCCCACTGGTTTTCTTTAGATACAACCATCTCTCCCATACCTCAGGAGGAGGAACTAGATaGGCTAGACAGACAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: YLPSPLVFFRYNHLSHTSGGGTR*ARQTDS Trigger: GCTGTCTGTCTGTCTAGCTCATCTAGTTCCTCCTCC...TGAGGTATGGGAGAGATGGTTGTATCTAAAGAAAACCAGTGGGGAAGGAAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGGCTCAGCTAGGAACTaGGGGTGCTCTAGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QSSFLPPSCTRISCLKGDGSARN*GCSSQS Trigger: AGACTGACTAGAGCACCCTCAGTTCCTAGCTGAGCC...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | TACCTTCCTTCCCCACTGGTTTTCTTTAGATACAACCATCTCTCCCATACCTCAGGATGGGGAAGGGAGTaGTCTGATGAAGATCCAACC | + |
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Preference number: 2 (lower is better) Translates to: YLPSPLVFFRYNHLSHTSGWGRE*SDEDPT Trigger: GGTTGGATCTTCATCAGACCACTCCCTTCCCCATCC...TGAGGTATGGGAGAGATGGTTGTATCTAAAGAAAACCAGTGGGGAAGGAAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGGGGGACAGTAAATGCTaGCTTCTCCATTGGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SFLPPSCTRISCLKGDARGDSKC*LLHWGL Trigger: CAAACCCCAATGGAGAAGCCAGCATTTACTGTCCCC...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR CAA 90 bp | GGGGTGAGTATATTAGGGCAGGTTAGTCTGTTTAAAGTTTGGTTTTaGCCTTACAGAGAAGCTTCTGAGAAGCACCCTGTCTCCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GVSILGQVSLFKVWF*PYREASEKHPVSSL Trigger: GAGGGAGGAGACAGGGTGCTTCTCAGAAGCTTCTCTGTAAGGCAAAAACCAAACTTTAAACAGACTAACCTGCCCTAATATACTCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGGAGTCTTCGAGGTGTaGGAGTTAAGGCAGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: QSSFLPPSCTRISCLKGDGVFEV*ELRQVS Trigger: AGACACCTGCCTTAACTCTCACACCTCGAAGACTCC...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATTCCAGAGCAGAAGGTTaGGGGACAGTAAATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QSSFLPPSCTRISCLKGDSRAEG*GTVNAG Trigger: GCCAGCATTTACTGTCCCCCAACCTTCTGCTCTGGA...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGCCTTTAAGGCAAAGCTaGAGTCTTCGAGGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SFLPPSCTRISCLKGDARPLRQS*SLRGVR Trigger: TCTCACACCTCGAAGACTCCAGCTTTGCCTTAAAGG...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGGGAGAGTGGAAAGGTTaGCTACAATACTCTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SFLPPSCTRISCLKGDARGEWKG*LQYSVG Trigger: ACCTACAGAGTATTGTAGGCAACCTTTCCACTCTCC...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGCAGGGTGGTGGTCAGTaGAAAGGAAACACTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: SFLPPSCTRISCLKGDARQGGGQ*KGNTVI Trigger: AATTACAGTGTTTCCTTTGCACTGACCACCACCCTG...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACACCTTCCTTCCCCACTaGTTTTCTTTAGATACAACC | + |
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Preference number: 2 (lower is better) Translates to: IYMYTQLARSRWGRASWDTFLPH*FSLDTT Trigger: GGTTGTATCTAAAGAAAACCAGTGGGGAAGGAAGGT...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACACAAACACTGAGTCCTaGCTTTTCTTTGTCCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: IYMYTQLARSRWGRASWDTNTES*LFFVPY Trigger: GTAAGGGACAAAGAAAAGCCAGGACTCAGTGTTTGT...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACTGGAGAATTCTAAACTaGAGAGTGGAAAGGTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: IYMYTQLARSRWGRASWDWRILN*RVERLP Trigger: AGGCAACCTTTCCACTCTCCAGTTTAGAATTCTCCA...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATCTCCCTGTGAAGTTTTaGTCCCACATCCTAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QSSFLPPSCTRISCLKGDLPVKF*SHILKA Trigger: TGCTTTTAGGATGTGGGAGCAAAACTTCACAGGGAG...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR GCA 72 bp | CCTCCCTCTTCCATAAGGGAAGCGCCGTCTCACTCCTaGTCCCATGGAACACCCCAGAAGGAAGGATGTTAC | + |
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Preference number: 3 (lower is better) Translates to: PPSSIREAPSHS*SHGTPQKEGCY Trigger: GTAACATCCTTCCTTCTGGGGTGTTCCATGGGAGCAGGAGTGAGACGGCGCTTCCCTTATGGAAGAGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCACCTCCCTGTGAAGTTTaGCTCCCACATCCTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: KAVHAADRGAQARSNLTAPPCEV*LPHPKS Trigger: GCTTTTAGGATGTGGGAGCAAAACTTCACAGGGAGG...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTGGGCCTGTCTCTGCCTGCGTCCCTAGCTCAGGCTCAGTAGTGCATGGTCTTCTCCATTGGGGTTaGATCTTTGGGACCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ESGPVSACVPSSGSVVHGLLHWG*IFGTRK Trigger: TTTCCTGGTCCCAAAGATCAAACCCCAATGGAGAAG...ACCATGCACTACTGAGCCTGAGCTAGGGACGCAGGCAGAGACAGGCCCACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAGGACTCTGTAACAATTaGGCTCTGCCACTTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KAVHAADRGAQARSNLTAGLCNN*ALPLPF Trigger: GAAAGGAAGTGGCAGAGCCAAATTGTTACAGAGTCC...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR CCA 72 bp | TTCCATAAGGGAAGCGCCGTCTCACTCCTGCTCCCATaGAACACCCCAGAAGGAAGGATGTTACCCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: FHKGSAVSLLLP*NTPEGRMLPRV Trigger: AACTCTGGGTAACATCCTTCCTTCTGGGGTGTTCCATGGGAGCAGGAGTGAGACGGCGCTTCCCTTATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR-3UTR CAA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACTGGAGAGTGGAAAGGTaGCCTACAATACTCTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNWRVER*PTILCR Trigger: CCTACAGAGTATTGTAGGCAACCTTTCCACTCTCCA...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR GCA 72 bp | GTTCTTTTCTGTTTGGACTCTGTAACAATTTGGCTCTaGCACTTCCTTTCTGTGGCATCCCCTCCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: VLFCLDSVTIWL*HFLSVASPPTP Trigger: GGGAGTGGGAGGGGATGCCACAGAAAGGAAGTGGCAGAGCCAAATTGTTACAGAGTCCAAACAGAAAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| 3UTR TCA 72 bp | ACCCAAATGAGAAAGGTTACCAGTCCCTTCCTGGATTaGATCAGGGTGGTGGTCAGTGCAAAGGAAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: TQMRKVTSPFLD*IRVVVSAKETL Trigger: CAGTGTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACCTTTCTCATTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACATGCTGGCTTCTCCATaGGGGTTTGATCTTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IYMYTQLARSRWGRASWDMLASP*GFDLWD Trigger: GTCCCAAAGATCAAACCCCAATGGAGAAGCCAGCAT...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATCTCCAGAGCAGAAGGTaGGGGGACAGTAAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSFLPPSCTRISCLKGDLQSRR*GDSKCW Trigger: CCAGCATTTACTGTCCCCCAACCTTCTGCTCTGGAG...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATAGTCCTGGCTTTTCTTaGTCCCTTACCAGGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSFLPPSCTRISCLKGDSPGFS*SLTRWR Trigger: CCTCCACCTGGTAAGGGACAAAGAAAAGCCAGGACT...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGCTTCTCCATTGGGGTTaGATCTTTGGGACCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPSCTRISCLKGDARLLHWG*IFGTRK Trigger: TTTCCTGGTCCCAAAGATCAAACCCCAATGGAGAAG...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGTGGAGAGTGGAAAGGTaGCCTACAATACTCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPSCTRISCLKGDARWRVER*PTILCR Trigger: CCTACAGAGTATTGTAGGCAACCTTTCCACTCTCCA...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR GCA 72 bp | CAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTaGAAAGGAAACACTGTAATTAACTACTTGCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSLPGLNQGGGQ*KGNTVINYLLG Trigger: TCCAAGCAAGTAGTTAATTACAGTGTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGTGTGTTCTTTTCTGTTaGGACTCTGTAACAATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPSCTRISCLKGDARCVLFC*DSVTIW Trigger: CCAAATTGTTACAGAGTCCAAACAGAAAAGAACACA...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR TCA 90 bp | CTAGATGAGCTAGACAGACAGACAGCCAGAGCGTGCGCACACGCACACACACGCGTCCTCCTTGCAGGCTaGCTTGAGCTGTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LDELDRQTARACAHAHTRVLLAG*LELFQI Trigger: GATCTGGAACAGCTCAAGTCAGCCTGCAAGGAGGAC...GCGTGTGTGTGCGTGTGCGCACGCTCTGGCTGTCTGTCTGTCTAGCTCATCTAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGGGCCTGTCTCTGCCTGCGTCCCTAGCTCAGGCTCAGTAGTGCATGGTTGTACTTCTTGGCACTaGGAATACGGGTTAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESGPVSACVPSSGSVVHGCTSWH*EYGLAW Trigger: CCAAGCTAACCCGTATTCCCAGTGCCAAGAAGTACA...ACCATGCACTACTGAGCCTGAGCTAGGGACGCAGGCAGAGACAGGCCCACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATGAGCTAGACAGACAGACAGCCAGAGCGTGCGCACACGCACACACACGCTCTTCTTCAGAGGGCTaGCGGATAATGTCTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LDELDRQTARACAHAHTRSSSEG*RIMSLY Trigger: GTACAAAGACATTATCCGGCAGCCCTCTGAAGAAGA...GCGTGTGTGTGCGTGTGCGCACGCTCTGGCTGTCTGTCTGTCTAGCTCATCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTGAGGATGGGGAAGGGAGTGGTCTGATGAAGATCCAACCTTCCTCCTCTGAATACGGGTTAGCTTaGTGTCCAGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PIEDGEGSGLMKIQPSSSEYGLA*CPAPPP Trigger: AGGAGGAGGAGCTGGACACCAAGCTAACCCGTATTC...AGAGGAGGAAGGTTGGATCTTCATCAGACCACTCCCTTCCCCATCCTCAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTGCCTCCAATCCCCTCATGAGGAGGAGGAACTAGATGAGCTAGACAGACCTTGCAGGCTGACTTaGGCTGTTCCAGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPCLQSPHEEEELDELDRPCRLT*AVPDLQ Trigger: TTGAAGATCTGGAACAGCTCAAGTCAGCCTGCAAGG...TCTGTCTAGCTCATCTAGTTCCTCCTCCTCATGAGGGGATTGGAGGCAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACGAATACGGGTTAGCTTaGTGTCCAGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNEYGLA*CPAPPP Trigger: AGGAGGAGGAGCTGGACACCAAGCTAACCCGTATTC...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR TCA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACGTCCTCCTTGCAGGCTaGCTTGAGCTGTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IYMYTQLARSRWGRASWDVLLAG*LELFQI Trigger: GATCTGGAACAGCTCAAGTCAGCCTGCAAGGAGGAC...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTAACCAGTCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTAGGCACTGCCTGTGGTaGTCTCCTCACTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LASNQSSIEIQTLSPGFSRHCLW*SPHSSH Trigger: GTGAGAAGAGTGAGGAGATCACCACAGGCAGTGCCT...AGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGACTGGTTAGAAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013842.12 |
||
| CDS-3UTR GCA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACTCTTCTTCAGAGGGCTaGCGGATAATGTCTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNSSSEG*RIMSLY Trigger: GTACAAAGACATTATCCGGCAGCCCTCTGAAGAAGA...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGCCTTGCAGGCTGACTTaGGCTGTTCCAGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPPSCTRISCLKGDARPCRLT*AVPDLQ Trigger: TTGAAGATCTGGAACAGCTCAAGTCAGCCTGCAAGG...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTAACCAGTCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTTGTACTTCTTGGCACTaGGAATACGGGTTAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LASNQSSIEIQTLSPGFSCTSWH*EYGLAW Trigger: CCAAGCTAACCCGTATTCCCAGTGCCAAGAAGTACA...AGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGACTGGTTAGAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTTTGTCCCTTACCAGGTCAGGCCTTCTTTGGTaGGGGAGCCAATTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSIEIQTLSPGFSLSLTRSGLLW*GSQFDD Trigger: ATCATCAAATTGGCTCCCCCACCAAAGAAGGCCTGA...CCTGGTAAGGGACAAAGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR CAA 72 bp | AGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTTaGTCCCTTACCAGGTGGAGGTTGAGTGGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIEIQTLSPGFS*SLTRWRLSGLF Trigger: AAAGAGGCCACTCAACCTCCACCTGGTAAGGGACAAAGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| 3UTR CAA 72 bp | CTTGCTTGGAGAATTCTAAACTGGAGAGTGGAAAGGTaGCCTACAATACTCTGTAGGTTGTGGGCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWRILNWRVER*PTILCRLWAGW Trigger: CCAACCTGCCCACAACCTACAGAGTATTGTAGGCAACCTTTCCACTCTCCAGTTTAGAATTCTCCAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATTCAGGCCTTCTTTGGTaGGGGAGCCAATTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSFLPPSCTRISCLKGDSGLLW*GSQFDD Trigger: ATCATCAAATTGGCTCCCCCACCAAAGAAGGCCTGA...ATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGAACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CCA 90 bp | TACCTTCCTTCCCCACTGGTTTTCTTTAGATACAACCATCTCTCCCATACCTCATGTCTTTGTACTTCTTaGCACTGGGAATACGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLPSPLVFFRYNHLSHTSCLCTS*HWEYGL Trigger: TAACCCGTATTCCCAGTGCCAAGAAGTACAAAGACA...TGAGGTATGGGAGAGATGGTTGTATCTAAAGAAAACCAGTGGGGAAGGAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGGCCTGTCTCTGCCTGCGTCCCTAGCTCAGGCTCAGTAGTGCATGGTGGAATACGGGTTAGCTaGGTGTCCAGCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESGPVSACVPSSGSVVHGGIRVS*VSSSSS Trigger: GGAGGAGGAGCTGGACACCAAGCTAACCCGTATTCC...ACCATGCACTACTGAGCCTGAGCTAGGGACGCAGGCAGAGACAGGCCCACTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGGCCTGTCTCTGCCTGCGTCCCTAGCTCAGGCTCAGTAGTGCATGGTTGCCGGATAATGTCTTaGTACTTCTTGGCACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESGPVSACVPSSGSVVHGCRIMS*YFLALG Trigger: TCCCAGTGCCAAGAAGTACAAAGACATTATCCGGCA...ACCATGCACTACTGAGCCTGAGCTAGGGACGCAGGCAGAGACAGGCCCACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCATGCCGGATAATGTCTTaGTACTTCTTGGCACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAVHAADRGAQARSNLTACRIMS*YFLALG Trigger: TCCCAGTGCCAAGAAGTACAAAGACATTATCCGGCA...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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| CDS-3UTR CAA 90 bp | AAGGCTGTGCACGCTGCAGACAGAGGAGCACAGGCTAGGAGCAACCTCACAGCAATGTCTTTGTACTTCTaGGCACTGGGAATACGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KAVHAADRGAQARSNLTAMSLYF*ALGIRV Trigger: AACCCGTATTCCCAGTGCCAAGAAGTACAAAGACAT...TGCTGTGAGGTTGCTCCTAGCCTGTGCTCCTCTGTCTGCAGCGTGCACAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACCAGTCCCTTCCTGGATTGAATCAGGGTGGTGGTCAGTGCAAAGGAAACTCCTTGCAGGCTGACTaGAGCTGTTCCAGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GYQSLPGLNQGGGQCKGNSLQAD*SCSRSS Trigger: TGAAGATCTGGAACAGCTCAAGTCAGCCTGCAAGGA...GTTTCCTTTGCACTGACCACCACCCTGATTCAATCCAGGAAGGGACTGGTAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCCCACCCAGTTGTACAAGGATTTCTTGTCTTAAAGGAGATGCCAGGGGAATACGGGTTAGCTaGGTGTCCAGCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLPPSCTRISCLKGDARGIRVS*VSSSSS Trigger: GGAGGAGGAGCTGGACACCAAGCTAACCCGTATTCC...CCTGGCATCTCCTTTAAGACAAGAAATCCTTGTACAACTGGGTGGGAGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACTCCTTGCAGGCTGACTaGAGCTGTTCCAGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IYMYTQLARSRWGRASWDSLQAD*SCSRSS Trigger: TGAAGATCTGGAACAGCTCAAGTCAGCCTGCAAGGA...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | ATATATATGTACACACAGTTAGCACGGTCAAGATGGGGAAGGGCATCTTGGGACTCTTTGTCCAGCTTGTaGTGGCTCTCCAGGAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IYMYTQLARSRWGRASWDSLSSL*WLSRKL Trigger: TAGCTTCCTGGAGAGCCACAACAAGCTGGACAAAGA...GTCCCAAGATGCCCTTCCCCATCTTGACCGTGCTAACTGTGTGTACATATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013842.12 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCTAACCAGTCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTGGTGGGGGAGCCAATTaGATGATTTCTTCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LASNQSSIEIQTLSPGFSGGGAN*MISSSE Trigger: CTCTGAAGAAGAAATCATCAAATTGGCTCCCCCACC...AGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGACTGGTTAGAAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATAGAGATACAAACACTGAGTCCTGGCTTTTCTTTGTCCCTTACCAGGATGTCTTTGTACTTCTaGGCACTGGGAATACGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSIEIQTLSPGFSLSLTRMSLYF*ALGIRV Trigger: AACCCGTATTCCCAGTGCCAAGAAGTACAAAGACAT...CCTGGTAAGGGACAAAGAAAAGCCAGGACTCAGTGTTTGTATCTCTATGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS-3UTR CAA 90 bp | TACCTTCCTTCCCCACTGGTTTTCTTTAGATACAACCATCTCTCCCATACCTCAGGTGGGGGAGCCAATTaGATGATTTCTTCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLPSPLVFFRYNHLSHTSGGGAN*MISSSE Trigger: CTCTGAAGAAGAAATCATCAAATTGGCTCCCCCACC...TGAGGTATGGGAGAGATGGTTGTATCTAAAGAAAACCAGTGGGGAAGGAAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
||
| CDS GCA 72 bp | GGGGGAGCCAATTTGATGATTTCTTCTTCAGAGGGCTaGCGGATAATGTCTTTGTACTTCTTGGCACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGANLMISSSEG*RIMSLYFLALG Trigger: TCCCAGTGCCAAGAAGTACAAAGACATTATCCGGCAGCCCTCTGAAGAAGAAATCATCAAATTGGCTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013842.12 ENSMUST00000111247.8 |
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