Pregenerated sensors for PDZRN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036218Ensembl transcript IDs: ENSMUST00000035399.10, ENSMUST00000169942.10
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGTCACTACATATCACGGGAAGATTGTCCACCCACACTTTACTaGGACAAAGACAATTGCCATTTATGTGTTAAATGTACAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QCHYISREDCPPTLY*DKDNCHLCVKCTGR Trigger: TCTTCCTGTACATTTAACACATAAATGGCAATTGTCTTTGTCTCAGTAAAGTGTGGGTGGACAATCTTCCCGTGATATGTAGTGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| 3UTR TCA 72 bp | TACATATCACGGGAAGATTGTCCACCCACACTTTACTaGGACAAAGACAATTGCCATTTATGTGTTAAATGT | + |
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Preference number: 3 (lower is better) Translates to: YISREDCPPTLY*DKDNCHLCVKC Trigger: ACATTTAACACATAAATGGCAATTGTCTTTGTCTCAGTAAAGTGTGGGTGGACAATCTTCCCGTGATATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| 3UTR TCA 72 bp | TTTATTGTCACAAATTACCACAATTATCTAGCTACATaGCCAGTGTCACTACATATCACGGGAAGATTGTCC | + |
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Preference number: 3 (lower is better) Translates to: FIVTNYHNYLAT*PVSLHITGRLS Trigger: GGACAATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTGACAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGAGCAGCTGCAGCTCGTaGTCCACCCCATCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLSSCSS*STPSCS Trigger: GGAACAGGATGGGGTGGAGCACGAGCTGCAGCTGCT...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGAGGCCCAGCTTCTCTTaGCTGCTAACACGACACAGC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLRPSFS*LLTRHS Trigger: GCTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCT...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCTGCTCTTCAGGGTGGTaGTGTGGGGCTCCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSCSSGW*CGAPPL Trigger: CAGTGGAGGAGCCCCACAGCACCACCCTGAAGAGCA...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCTGTCGGGCCTGGCGATaGGCAGCACGATTCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSCRAWR*AARFSY Trigger: GTAAGAGAATCGTGCTGCTCATCGCCAGGCCCGACA...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGTGTGGCTCAGTTCGATaGTGCTCAGCTCCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLCGSVR*CSAPSC Trigger: GCAAGAAGGAGCTGAGCATCATCGAACTGAGCCACA...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGGCAGCTCAGAGGCTGTaGGCTGTGCTCCTTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLAAQRL*AVLLHY Trigger: ATAATGAAGGAGCACAGCGCACAGCCTCTGAGCTGC...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGGAGAGGTATGGAGGATaGTCACTGACTGTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLERYGG*SLTVCS Trigger: GGAGCACACAGTCAGTGAGCATCCTCCATACCTCTC...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGGGAGTGGCAGCTGTCTaGAAGCAAAAATGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLGVAAV*KQKWTG Trigger: ACCTGTCCATTTTTGCTTTCAGACAGCTGCCACTCC...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGCATCCTTGGCAGCAATaGTATTTGGGTCAACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLHPWQQ*YLGQPR Trigger: GCGAGGTTGACCCAAATAGCATTGCTGCCAAGGATG...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCTCCCCAGCTCTCTCTTaGTCTTCAGGGTGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSSPALS*SSGWCC Trigger: ACAGCACCACCCTGAAGAGCAAGAGAGAGCTGGGGA...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCACACACCTCCTGGTTaGTGGCACAGTCGGAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSHTPPG*WHSRSL Trigger: TAGACTCCGACTGTGCCAGCAACCAGGAGGTGTGTG...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCTCCACTGCCTCTTCATaGGTGGCCTTTGAGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSSTASS*VAFERS Trigger: GGATCTCTCAAAGGCCACTCATGAAGAGGCAGTGGA...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCGCTTCTGCAGCTCTCTaGCGTATTGTACGCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSASAAL*RIVRTR Trigger: TCGAGTGCGTACAATACGGCAGAGAGCTGCAGAAGC...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCGGTCCAGAAGCTGGCTaGTTTCTAGACCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSGPEAG*FLDPSP Trigger: TGGAGAAGGGTCTAGAAAGCAGCCAGCTTCTGGACC...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCTGCCTCTTCATGAGTaGCCTTTGAGAGATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSLPLHE*PLRDPC Trigger: GCAGGGATCTCTCAAAGGCCACTCATGAAGAGGCAG...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCACTTTCTGGAGCCTGTaGGCCTGCATGATGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSTFWSL*ACMMFW Trigger: CCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGT...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCGAATCCGGCCATCCTTaGCAGCAATGCTATTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSESGHP*QQCYLG Trigger: ACCCAAATAGCATTGCTGCCAAGGATGGCCGGATTC...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGGTTGCACATCCAGGCTaGTGTTGTAATTTCGGAATC | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLVAHPG*CCNFGI Trigger: GATTCCGAAATTACAACACCAGCCTGGATGTGCAAC...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAACCCTGGTGCTCTGTCTaGGAGGGGACTGATGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKPWCSV*EGTDGL Trigger: CAGCCCATCAGTCCCCTCCCAGACAGAGCACCAGGG...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGTTTTCATCTCACTCATaGTGTCGTCGTCTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: YSTETGSVLSKPVVPMCLFSSHS*CRRLWS Trigger: TGACCACAGACGACGACACCATGAGTGAGATGAAAA...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTGCTCAGCTCCTTCTTaGCTTCGCCGCTGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGCSAPS*LRRCSV Trigger: CACAGAGCAGCGGCGAAGGCAAGAAGGAGCTGAGCA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCGGCAGCAATGCTATTTaGGTCAACCTCGCTGACATA | + |
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Preference number: 4 (lower is better) Translates to: HIERGNDTLPKLVACSLSGSNAI*VNLADI Trigger: TATGTCAGCGAGGTTGACCCAAATAGCATTGCTGCC...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGCTCCCTAGCGTGTCTTaGCTCTTCCCCAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGLPSVS*LFPSSL Trigger: GAGAGAGCTGGGGAAGAGCCAAGACACGCTAGGGAG...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTGTCTGGGAGGGGACTaGTGGGCTGTCATCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGCLGGD*WAVIML Trigger: AAGCATGATGACAGCCCATCAGTCCCCTCCCAGACA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGCTCACCAAGCTGAGCTaGCTCTGGGCATACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGLTKLS*LWAYST Trigger: TGTGGAGTATGCCCAGAGTCAGCTCAGCTTGGTGAG...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCCTTCTCCTGGTTGTTaGAAGAGGAGGTGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCPSPGC*KRRWPC Trigger: ACACGGCCACCTCCTCTTCCAACAACCAGGAGAAGG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCTGACTGTGTGCTCCTaGTCCAGAAGCTGGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCLTVCS*SRSWLL Trigger: AAGCAGCCAGCTTCTGGACCAGGAGCACACAGTCAG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCCTTCCATTCCATCTTaGGCTCCGAGCCCCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCPSIPS*APSPFV Trigger: CACAAAGGGGCTCGGAGCCCAAGATGGAATGGAAGG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTGACCCTAGTGCCATCTaGGGATTTGGCCCCATGAGT | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCDPSAI*GFGPMS Trigger: ACTCATGGGGCCAAATCCCCAGATGGCACTAGGGTC...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGTGTGCTGGCATTCGTaGGCTGTACTTCCGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKVCWHS*AVLPES Trigger: TGACTCCGGAAGTACAGCTCACGAATGCCAGCACAC...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTGCGTTCTCCTGCTCTaGGCTCTCATCATTCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGCVLLL*ALIIPQ Trigger: TTGCGGAATGATGAGAGCTCAGAGCAGGAGAACGCA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTATGGAGGATGCTCACTaGCTGTGTGCTCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPQLSSYMTSVTTYHGKIMEDAH*LCAPGP Trigger: TGGACCAGGAGCACACAGTCAGTGAGCATCCTCCAT...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGCACTCCGCTCCTCCTTaGTCTTTAAGGCACGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGHSAPP*SLRHVP Trigger: AGGAACGTGCCTTAAAGATCAAGGAGGAGCGGAGTG...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTTGCTCACTGACTGTGTaGTCCTGGTCCAGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPQLSSYMTSVTTYHGKICSLTV*SWSRSW Trigger: CCAGCTTCTGGACCAGGAGCACACAGTCAGTGAGCA...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTTGTTGGAAGAGGAGGTaGCCGTGTCTGTTGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCCWKRR*PCLLCL Trigger: AAGGCACAACAGACACGGCCACCTCCTCTTCCAACA...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCATGCGCCGGAATGTTaGCATATCTGTAGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCHAPEC*HICRRS Trigger: GCTCCTCCTACAGATATGCCAACATTCCGGCGCATG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAATGGTGTCGTCGTCTGTaGTCATGCCACTCCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKWCRRL*SCHSAP Trigger: AGGAGCGGAGTGGCATGACCACAGACGACGACACCA...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTTCATGAGTGGCCTTTaGGAGATCCCTGCCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGFMSGL*EIPAID Trigger: GTCAATGGCAGGGATCTCTCAAAGGCCACTCATGAA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCGAGCTGTCCTTGTCTaGCTTTTCTGGGTGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCRAVLV*LFWVFH Trigger: ATGGAACACCCAGAAAAGTCAGACAAGGACAGCTCG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTACATGCTCACCAAGCTaGGCTGACTCTGGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: LPQLSSYMTSVTTYHGKITCSPS*ADSGHT Trigger: AGTATGCCCAGAGTCAGCTCAGCTTGGTGAGCATGT...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAAGTCATCTGCTCTGTCTaGATCAGCGGGCAAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKVICSV*ISGQAG Trigger: TCCAGCTTGCCCGCTGATGCAGACAGAGCAGATGAC...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCAGCACAACTCTCACTaGATTGATGCTCAAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCQHNSH*IDAQGS Trigger: GGAGCCTTGAGCATCAATGCAGTGAGAGTTGTGCTG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTTTAAGCTCCAACAGCTaGTGGAAGCCTTCACACACC | + |
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Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCLSSNS*WKPSHT Trigger: GGTGTGTGAAGGCTTCCAGCAGCTGTTGGAGCTTAA...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTCCCCCATCATGCAATaGCCAGATGTCTCCGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGSPIMQ*PDVSVL Trigger: CAATACGGAGACATCTGGGCATTGCATGATGGGGGA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAATCTTACACTCATCGCTaGAGAGCAGAGCCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKSYTHR*RAEPRP Trigger: AGGCCGTGGCTCTGCTCTCCAGCGATGAGTGTAAGA...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGGAGGTTGATCATTCTTaGAAGGGAACTGTCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGEVDHS*KGTVRG Trigger: TCCCCGGACAGTTCCCTTCCAAGAATGATCAACCTC...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTGGGGATTTGGCCCCATaGGTCATCAGTTCTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPQLSSYMTSVTTYHGKIGDLAP*VISSWI Trigger: AATCCAAGAACTGATGACTCATGGGGCCAAATCCCC...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTGTGCTCCTTCATTATaGTCTTCCTCCAGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGCAPSL*SSSSSS Trigger: AGAGCTGCTGGAGGAAGACCATAATGAAGGAGCACA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTGACAGAAAGGCATTATaGACCCTAGTGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQLSSYMTSVTTYHGKIDRKAL*TLVPSG Trigger: CCCAGATGGCACTAGGGTCCATAATGCCTTTCTGTC...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR TCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAAAGAGATCCCTGCCATTaGCCTGGGAAACTTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKRDPCH*PGKLRR Trigger: TCTACGAAGTTTCCCAGGTCAATGGCAGGGATCTCT...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAATCCACTGCGTTCTCCTaGTCTGAGCTCTCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKSTAFS*SELSSF Trigger: GAATGATGAGAGCTCAGAGCAGGAGAACGCAGTGGA...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCTCGATTGCACTCGATaGTACTGCTTGAGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCLDCTR*YCLSST Trigger: TGTACTACTCAAGCAGTACCATCGAGTGCAATCGAG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGGCCTGCATGATGTTCTaGCACTCTAGCTCAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGACMMF*HSSSMF Trigger: AAACATTGAGCTAGAGTGCCAGAACATCATGCAGGC...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAACAGATGTCTCCGTATTaGTCCGTCACTTTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKQMSPY*SVTFWS Trigger: GCTCCAGAAAGTGACGGACCAATACGGAGACATCTG...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CCA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTATAAGGAGAGAGGTATaGAGGATGCTCACTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLCVKCTGRCSRGAASCIRREV*RMLTDC Trigger: ACAGTCAGTGAGCATCCTCCATACCTCTCTCCTTAT...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAATATTCAAAGTCATCTaGTCTGTCTGCATCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKIFKVI*SVCISG Trigger: CCCGCTGATGCAGACAGAGCAGATGACTTTGAATAT...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR GCA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAAGATGGGCTGTCATCATaGTTCTCAGATTTTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKDGLSS*FSDFSY Trigger: ATAAGAAAAATCTGAGAAGCATGATGACAGCCCATC...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS CCA 90 bp | CTGCGCAGCGGCAGCACCCGGTACAGCTCGCCCGGCGCCAGCGGCTaGCACTGCAGCGGGCACCAGCGTCTCCCCGCCGCCCAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSGSTRYSSPGASG*HCSGHQRLPAAQGS Trigger: GCTGCCCTGGGCGGCGGGGAGACGCTGGTGCCCGCTGCAGTGCCAGCCGCTGGCGCCGGGCGAGCTGTACCGGGTGCTGCCGCTGCGCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 90 bp | CTTGGTCGCCGGGTGCTTTTCCTCCCCGCCGCCTCCGCAGCCGCCTaGGCAGTGGCTGTCACAGCCGCTGGCAGGGCCGAAGGCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGRRVLFLPAASAAA*AVAVTAAGRAEGAA Trigger: CGCTGCGCCTTCGGCCCTGCCAGCGGCTGTGACAGCCACTGCCCAGGCGGCTGCGGAGGCGGCGGGGAGGAAAAGCACCCGGCGACCAAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 90 bp | GGGCAGTGGCTGTCACAGCCGCTGGCAGGGCCGAAGGCGCAGCGCTaGATGTGCACTGCCAGCACCCGCAGTCGCCCCTGTGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQWLSQPLAGPKAQR*MCTASTRSRPCGHS Trigger: GCTGTGGCCACAGGGGCGACTGCGGGTGCTGGCAGTGCACATCCAGCGCTGCGCCTTCGGCCCTGCCAGCGGCTGTGACAGCCACTGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS GCA 90 bp | CCTGTCCGCTGTAGTTGCACTGCACGCGCAGTTGCTGGACCAGGCTaGGCAGCGGCAGCACCCGGTACAGCTCGCCCGGCGCCAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRCSCTARAVAGPG*AAAAPGTARPAPAA Trigger: AGCCGCTGGCGCCGGGCGAGCTGTACCGGGTGCTGCCGCTGCGCAGCCTGGTCCAGCAACTGCGCGTGCAGTGCAACTACAGCGGACAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 90 bp | GTGCACGCGGGCTCCTCCAGTACCTGGCCACACAGTAGCTGGCACTaGAAAGCGGGGTCCACGGCTTCCGCGAGACGCTCCAAAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHAGSSSTWPHSSWH*KAGSTASARRSKAK Trigger: CTTCGCTTTGGAGCGTCTCGCGGAAGCCGTGGACCCCGCTTTCCAGTGCCAGCTACTGTGTGGCCAGGTACTGGAGGAGCCCGCGTGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS GCA 90 bp | TCTGCTCTCCATCCTGGCCGCGGCCTCCCGGGTTCCCGACGAAGTTaGGCGTGTGCGCCATGTACAGAGCCAACTTCTCCTGATACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SALHPGRGLPGSRRS*ACAPCTEPTSPDTC Trigger: GCAGGTATCAGGAGAAGTTGGCTCTGTACATGGCGCACACGCGCAACTTCGTCGGGAACCCGGGAGGCCGCGGCCAGGATGGAGAGCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS TCA 90 bp | CCGACGAAGTTGCGCGTGTGCGCCATGTACAGAGCCAACTTCTCCTaGTACCTGCGCTGCAACAAGCTGACCTGCGCCCGCCGCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTKLRVCAMYRANFS*YLRCNKLTCARRVF Trigger: GAAGACGCGGCGGGCGCAGGTCAGCTTGTTGCAGCGCAGGTATCAGGAGAAGTTGGCTCTGTACATGGCGCACACGCGCAACTTCGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 90 bp | TCTTCTCTTTCCAACACAACAGTGAACGGCTTCTGCTCTCCATCCTaGCCGCGGCCTCCCGGGTTCCCGACGAAGTTGCGCGTGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSNTTVNGFCSPS*PRPPGFPTKLRVCA Trigger: GGCGCACACGCGCAACTTCGTCGGGAACCCGGGAGGCCGCGGCCAGGATGGAGAGCAGAAGCCGTTCACTGTTGTGTTGGAAAGAGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS GCA 90 bp | CCCAAAGTGTCATCTTCTCTTTCCAACACAACAGTGAACGGCTTCTaGTCTCCATCCTGGCCGCGGCCTCCCGGGTTCCCGACGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKVSSSLSNTTVNGF*SPSWPRPPGFPTKL Trigger: CAACTTCGTCGGGAACCCGGGAGGCCGCGGCCAGGATGGAGAGCAGAAGCCGTTCACTGTTGTGTTGGAAAGAGAAGATGACACTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS TCA 90 bp | CAGTCGGAGTCTAAGCACTCACCCCCAGCACAACTCTCACTGCATTaGTGCTCAAGGCTCCCTAGCGTGTCTTGGCTCTTCCCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSESKHSPPAQLSLH*CSRLPSVSWLFPSS Trigger: AGAGCTGGGGAAGAGCCAAGACACGCTAGGGAGCCTTGAGCATCAATGCAGTGAGAGTTGTGCTGGGGGTGAGTGCTTAGACTCCGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 90 bp | TGGCACAGTCGGAGTCTAAGCACTCACCCCCAGCACAACTCTCACTaGATTGATGCTCAAGGCTCCCTAGCGTGTCTTGGCTCTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WHSRSLSTHPQHNSH*IDAQGSLACLGSSP Trigger: TGGGGAAGAGCCAAGACACGCTAGGGAGCCTTGAGCATCAATGCAGTGAGAGTTGTGCTGGGGGTGAGTGCTTAGACTCCGACTGTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 90 bp | TTCTGGCACTCTAGCTCAATGTTTCGCAGCTCCTCGTTAAGCAGCTaGAGCTCGTGCTCCACCCCATCCTGTTCCCCTCGATTGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: FWHSSSMFRSSSLSS*SSCSTPSCSPRLHS Trigger: CGAGTGCAATCGAGGGGAACAGGATGGGGTGGAGCACGAGCTGCAGCTGCTTAACGAGGAGCTGCGAAACATTGAGCTAGAGTGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 90 bp | TCTAGCTCAATGTTTCGCAGCTCCTCGTTAAGCAGCTGCAGCTCGTaGTCCACCCCATCCTGTTCCCCTCGATTGCACTCGATGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSMFRSSSLSSCSS*STPSCSPRLHSMVL Trigger: CAGTACCATCGAGTGCAATCGAGGGGAACAGGATGGGGTGGAGCACGAGCTGCAGCTGCTTAACGAGGAGCTGCGAAACATTGAGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 90 bp | CAGATGTCTCCGTATTGGTCCGTCACTTTCTGGAGCCTGTGGGCCTaGATGATGTTCTGGCACTCTAGCTCAATGTTTCGCAGCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QMSPYWSVTFWSLWA*MMFWHSSSMFRSSS Trigger: CGAGGAGCTGCGAAACATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS-3UTR CAA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGTTCCCCAGCTCTCTCTaGCTCTTCAGGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSTETGSVLSKPVVPMCLFPSSL*LFRVVL Trigger: CAGCACCACCCTGAAGAGCAAGAGAGAGCTGGGGAA...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS CCA 90 bp | TATTGGTCCGTCACTTTCTGGAGCCTGTGGGCCTGCATGATGTTCTaGCACTCTAGCTCAATGTTTCGCAGCTCCTCGTTAAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YWSVTFWSLWACMMF*HSSSMFRSSSLSSC Trigger: GCAGCTGCTTAACGAGGAGCTGCGAAACATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 90 bp | AATGCCCAGATGTCTCCGTATTGGTCCGTCACTTTCTGGAGCCTGTaGGCCTGCATGATGTTCTGGCACTCTAGCTCAATGTTTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NAQMSPYWSVTFWSL*ACMMFWHSSSMFRS Trigger: GCTGCGAAACATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 90 bp | CCATCATGCAATGCCCAGATGTCTCCGTATTGGTCCGTCACTTTCTaGAGCCTGTGGGCCTGCATGATGTTCTGGCACTCTAGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSCNAQMSPYWSVTF*SLWACMMFWHSSSM Trigger: CATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS-3UTR CAA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGCAGGCCCAGCTTCTCTaGACTGCTAACACGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: YSTETGSVLSKPVVPMCLQAQLL*TANTTQ Trigger: CTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTG...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCCAGTTGTCCCCATGTGTCTGACCTTCCATTCCATCTaGGGCTCCGAGCCCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSTETGSVLSKPVVPMCLTFHSI*GSEPLC Trigger: ACAAAGGGGCTCGGAGCCCAAGATGGAATGGAAGGT...CAGACACATGGGGACAACTGGCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTCTCCCGGCGCCGCCTTaGCTCCTTGGCCCGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPQLSSYMTSVTTYHGKILPAPP*LLGPDQ Trigger: CTGGTCCGGGCCAAGGAGCAAAGGCGGCGCCGGGAG...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS GCA 90 bp | CACATCCAGGCTGGTGTTGTAATTTCGGAATCCCCCATCATGCAATaGCCAGATGTCTCCGTATTGGTCCGTCACTTTCTGGAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HIQAGVVISESPIMQ*PDVSVLVRHFLEPV Trigger: CACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGGGGGATTCCGAAATTACAACACCAGCCTGGATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS-3UTR CAA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCTCACACACCTCCTGGTaGCTGGCACAGTCGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HIERGNDTLPKLVACSLSSHTSW*LAQSES Trigger: AGACTCCGACTGTGCCAGCAACCAGGAGGTGTGTGA...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS TCA 90 bp | CTCCACCCCATCCTGTTCCCCTCGATTGCACTCGATGGTACTGCTTaGGTAGTACAGGTCGTAATCTCCGTGGTTTCGAATCTTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHPILFPSIALDGTA*VVQVVISVVSNLKL Trigger: GAGCTTAAGATTCGAAACCACGGAGATTACGACCTGTACTACTCAAGCAGTACCATCGAGTGCAATCGAGGGGAACAGGATGGGGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 90 bp | TTTGGCTGCTGCAGCTCAGAGGCTGTGCGCTGTGCTCCTTCATTATaGTCTTCCTCCAGCAGCTCTGAGTTTAACTCCTCTAAGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FGCCSSEAVRCAPSL*SSSSSSEFNSSKNS Trigger: CGAATTCTTAGAGGAGTTAAACTCAGAGCTGCTGGAGGAAGACCATAATGAAGGAGCACAGCGCACAGCCTCTGAGCTGCAGCAGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 90 bp | AATGTTGGCATATCTGTAGGAGGAGCTGTGATAAGGAGAGAGGTATaGAGGATGCTCACTGACTGTGTGCTCCTGGTCCAGAAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NVGISVGGAVIRREV*RMLTDCVLLVQKLA Trigger: AGCCAGCTTCTGGACCAGGAGCACACAGTCAGTGAGCATCCTCCATACCTCTCTCCTTATCACAGCTCCTCCTACAGATATGCCAACATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS-3UTR CAA 90 bp | CACATTGAACGAGGCAATGATACTCTACCGAAACTGGTAGCGTGCTCTCTAAGCATCCAGTTTCCCCCGTaGCACATCCAGGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIERGNDTLPKLVACSLSIQFPP*HIQAGV Trigger: AACACCAGCCTGGATGTGCAACGGGGGAAACTGGAT...GCTTAGAGAGCACGCTACCAGTTTCGGTAGAGTATCATTGCCTCGTTCAATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS GCA 90 bp | ACGACACAGCTCGACCTCCTCATATTCAAAGTCATCTGCTCTGTCTaGATCAGCGGGCAAGCTGGAGACGTACTCATGGTCTTCATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TTQLDLLIFKVICSV*ISGQAGDVLMVFIK Trigger: TTTTATGAAGACCATGAGTACGTCTCCAGCTTGCCCGCTGATGCAGACAGAGCAGATGACTTTGAATATGAGGAGGTCGAGCTGTGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 90 bp | CCTCATATTCAAAGTCATCTGCTCTGTCTGCATCAGCGGGCAAGCTaGAGACGTACTCATGGTCTTCATAAAACCCATGCTCCATCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHIQSHLLCLHQRAS*RRTHGLHKTHAPSD Trigger: ATCCGATGGAGCATGGGTTTTATGAAGACCATGAGTACGTCTCCAGCTTGCCCGCTGATGCAGACAGAGCAGATGACTTTGAATATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS-3UTR CAA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTTCCTTCTCCTGGTTGTaGGAAGAGGAGGTGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CHLCVKCTGRCSRGAASCSFSWL*EEEVAV Trigger: CACGGCCACCTCCTCTTCCAACAACCAGGAGAAGGA...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAACTCTGTGGGCTCTCTTaGAGGCTCTCCAGCCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKLCGLS*RLSSRL Trigger: GAGTCGGCTGGAGAGCCTCAAAGAGAGCCCACAGAG...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAGGTGGCCGTGTCTGTaGTGCCTTCTTCTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGRWPCL*CLLLPP Trigger: AGGAGGAAGAAGAAGGCACAACAGACACGGCCACCT...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAATCTCTCACTGGCCTCTaGGTGATGTACCGGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKSLTGL*VMYRVP Trigger: TGGGACCCGGTACATCACCAAGAGGCCAGTGAGAGA...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCCACTCCGCTCCTCCTaGATCTTTAAGGCACGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHLCVKCTGRCSRGAASCPLRSS*IFKARS Trigger: GGAACGTGCCTTAAAGATCAAGGAGGAGCGGAGTGG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | AAGAGTCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAATGCTCAGCTCCTTCTaGCCTTCGCCGCTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSLLIVHIQPNMLTTVGKMLSSF*PSPLLC Trigger: ACAGAGCAGCGGCGAAGGCAAGAAGGAGCTGAGCAT...TTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTCGAATCCGGCCATCCTaGGCAGCAATGCTATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPQLSSYMTSVTTYHGKIRIRPS*AAMLFG Trigger: CCCAAATAGCATTGCTGCCAAGGATGGCCGGATTCG...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTCCAGATGTCTCCGTATaGGTCCGTCACTTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CHLCVKCTGRCSRGAASCPDVSV*VRHFLE Trigger: CTCCAGAAAGTGACGGACCAATACGGAGACATCTGG...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TGCCATTTATGTGTTAAATGTACAGGAAGATGTTCAAGGGGTGCTGCTTCATGTGCACTCGAGCTGTCCTaGTCTGACTTTTCTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHLCVKCTGRCSRGAASCALELS*SDFSGC Trigger: ACACCCAGAAAAGTCAGACAAGGACAGCTCGAGTGC...ACATGAAGCAGCACCCCTTGAACATCTTCCTGTACATTTAACACATAAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | CACAAATTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGTCGGTGGCTTTGACTTaGGTAGATGTGTATTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKLPQLSSYMTSVTTYHGSVALT*VDVYSL Trigger: CAGGGAATACACATCTACCAAAGTCAAAGCCACCGA...CCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAATTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TCTTCTAATAGTACACATACAACCAAACATGTTAACCACCGTGGGCAAAGAAAACCCCTTTGTGATTCCTaGCACATGCTCACCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSNSTHTTKHVNHRGQRKPLCDS*HMLTKL Trigger: CAGCTTGGTGAGCATGTGCAAGGAATCACAAAGGGG...TTTTCTTTGCCCACGGTGGTTAACATGTTTGGTTGTATGTGTACTATTAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS-3UTR CAA 90 bp | TTACCACAATTATCTAGCTACATGACCAGTGTCACTACATATCACGGGAAGATTATGAGTCATCAGTTCTaGGATTGTCATCCAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LPQLSSYMTSVTTYHGKIMSHQF*DCHPVI Trigger: GATAACTGGATGACAATCCAAGAACTGATGACTCAT...AATCTTCCCGTGATATGTAGTGACACTGGTCATGTAGCTAGATAATTGTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035399.10 |
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| CDS CCA 72 bp | GGCAGCACCCGGTACAGCTCGCCCGGCGCCAGCGGCTaGCACTGCAGCGGGCACCAGCGTCTCCCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSTRYSSPGASG*HCSGHQRLPAA Trigger: GGCGGCGGGGAGACGCTGGTGCCCGCTGCAGTGCCAGCCGCTGGCGCCGGGCGAGCTGTACCGGGTGCTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
||
| CDS GCA 72 bp | CAGCCGCTGGCAGGGCCGAAGGCGCAGCGCTGGATGTaGACTGCCAGCACCCGCAGTCGCCCCTGTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPLAGPKAQRWM*TASTRSRPCGH Trigger: GTGGCCACAGGGGCGACTGCGGGTGCTGGCAGTGCACATCCAGCGCTGCGCCTTCGGCCCTGCCAGCGGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | CGGGTGCTTTTCCTCCCCGCCGCCTCCGCAGCCGCCTaGGCAGTGGCTGTCACAGCCGCTGGCAGGGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVLFLPAASAAA*AVAVTAAGRAE Trigger: TTCGGCCCTGCCAGCGGCTGTGACAGCCACTGCCCAGGCGGCTGCGGAGGCGGCGGGGAGGAAAAGCACCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | CTCCGCAGCCGCCTGGGCAGTGGCTGTCACAGCCGCTaGCAGGGCCGAAGGCGCAGCGCTGGATGTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LRSRLGSGCHSR*QGRRRSAGCAL Trigger: CAGTGCACATCCAGCGCTGCGCCTTCGGCCCTGCCAGCGGCTGTGACAGCCACTGCCCAGGCGGCTGCGGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | CTGTCACAGCCGCTGGCAGGGCCGAAGGCGCAGCGCTaGATGTGCACTGCCAGCACCCGCAGTCGCCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSQPLAGPKAQR*MCTASTRSRPC Trigger: ACAGGGGCGACTGCGGGTGCTGGCAGTGCACATCCAGCGCTGCGCCTTCGGCCCTGCCAGCGGCTGTGACAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | TGCCCGCAAGGCGTGCACGCGGGCTCCTCCAGTACCTaGCCACACAGTAGCTGGCACTGGAAAGCGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPQGVHAGSSST*PHSSWHWKAGS Trigger: GGACCCCGCTTTCCAGTGCCAGCTACTGTGTGGCCAGGTACTGGAGGAGCCCGCGTGCACGCCTTGCGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | GGCTCCTCCAGTACCTGGCCACACAGTAGCTGGCACTaGAAAGCGGGGTCCACGGCTTCCGCGAGACGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSSTWPHSSWH*KAGSTASARRS Trigger: GGAGCGTCTCGCGGAAGCCGTGGACCCCGCTTTCCAGTGCCAGCTACTGTGTGGCCAGGTACTGGAGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | TCCAACACAACAGTGAACGGCTTCTGCTCTCCATCCTaGCCGCGGCCTCCCGGGTTCCCGACGAAGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SNTTVNGFCSPS*PRPPGFPTKLR Trigger: GCGCAACTTCGTCGGGAACCCGGGAGGCCGCGGCCAGGATGGAGAGCAGAAGCCGTTCACTGTTGTGTTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS TCA 72 bp | GGTGCTGTGGGGCTCCTCCACTGCGTTCTCCTGCTCTaGGCTCTCATCATTCCGCAAGCTCTCATCCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAVGLLHCVLLL*ALIIPQALIRA Trigger: CGCACGGATGAGAGCTTGCGGAATGATGAGAGCTCAGAGCAGGAGAACGCAGTGGAGGAGCCCCACAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | TTGCGCGTGTGCGCCATGTACAGAGCCAACTTCTCCTaGTACCTGCGCTGCAACAAGCTGACCTGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRVCAMYRANFS*YLRCNKLTCAR Trigger: GCGGGCGCAGGTCAGCTTGTTGCAGCGCAGGTATCAGGAGAAGTTGGCTCTGTACATGGCGCACACGCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | GATGCTCAGCTCCTTCTTGCCTTCGCCGCTGCTCTGTaGGCTCTCTTTGAGGCTCTCCAGCCGACTCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DAQLLLAFAAAL*ALFEALQPTPH Trigger: ATGCGGAGTCGGCTGGAGAGCCTCAAAGAGAGCCCACAGAGCAGCGGCGAAGGCAAGAAGGAGCTGAGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | AGGGTGGTGCTGTGGGGCTCCTCCACTGCGTTCTCCTaGTCTGAGCTCTCATCATTCCGCAAGCTCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RVVLWGSSTAFS*SELSSFRKLSS Trigger: GGATGAGAGCTTGCGGAATGATGAGAGCTCAGAGCAGGAGAACGCAGTGGAGGAGCCCCACAGCACCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | GGGAACTGTCCGGGGACCTGTCTACAGTCAGCGGAGTaGTTCTGCAGCTCTCTGCCGTATTGTACGCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: GNCPGTCLQSAE*FCSSLPYCTHS Trigger: CGAGTGCGTACAATACGGCAGAGAGCTGCAGAAGCACTCCGCTGACTGTAGACAGGTCCCCGGACAGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | TCATCTTCTCTTTCCAACACAACAGTGAACGGCTTCTaGTCTCCATCCTGGCCGCGGCCTCCCGGGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSNTTVNGF*SPSWPRPPGFP Trigger: CGGGAACCCGGGAGGCCGCGGCCAGGATGGAGAGCAGAAGCCGTTCACTGTTGTGTTGGAAAGAGAAGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS TCA 72 bp | GCTGTACTTCCGGAGTCATGCCGTATGTTGGCCGGCTaGGGGGAGTCCGCCTTAACACCTGTACCACTATGG | + |
|
Preference number: 6 (lower is better) Translates to: AVLPESCRMLAG*GESALTPVPLW Trigger: CCATAGTGGTACAGGTGTTAAGGCGGACTCCCCTCAGCCGGCCAACATACGGCATGACTCCGGAAGTACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | GCCAGCCTTCATCCAGCTGCATGTCGGGCCTGGCGATaGGCAGCACGATTCTCTTACACTCATCGCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASLHPAACRAWR*AARFSYTHRWR Trigger: TCTCCAGCGATGAGTGTAAGAGAATCGTGCTGCTCATCGCCAGGCCCGACATGCAGCTGGATGAAGGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | CCCATGCTCCATCGGATGAAGGGAGTGGCAGCTGTCTaGAAGCAAAAATGGACAGGTGTCAGGCACCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PMLHRMKGVAAV*KQKWTGVRHRR Trigger: CCTCCGGTGCCTGACACCTGTCCATTTTTGCTTTCAGACAGCTGCCACTCCCTTCATCCGATGGAGCATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | GCAGCTCGTGCTCCACCCCATCCTGTTCCCCTCGATTaGACTCGATGGTACTGCTTGAGTAGTACAGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: AARAPPHPVPLD*TRWYCLSSTGR Trigger: ACGACCTGTACTACTCAAGCAGTACCATCGAGTGCAATCGAGGGGAACAGGATGGGGTGGAGCACGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | TCTAGCTCAATGTTTCGCAGCTCCTCGTTAAGCAGCTaGAGCTCGTGCTCCACCCCATCCTGTTCCCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSMFRSSSLSS*SSCSTPSCSPR Trigger: TCGAGGGGAACAGGATGGGGTGGAGCACGAGCTGCAGCTGCTTAACGAGGAGCTGCGAAACATTGAGCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | CAAAAATGGACAGGTGTCAGGCACCGGAGGGGTGAGTaGCCGAAGCTTCGCCAGGGCCATGATGTGTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QKWTGVRHRRGE*PKLRQGHDVFK Trigger: TTTGAACACATCATGGCCCTGGCGAAGCTTCGGCCACTCACCCCTCCGGTGCCTGACACCTGTCCATTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | GGATGCTCACTGACTGTGTGCTCCTGGTCCAGAAGCTaGCTGCTTTCTAGACCCTTCTCCAGGCTTTCGACG | + |
|
Preference number: 6 (lower is better) Translates to: GCSLTVCSWSRS*LLSRPFSRLST Trigger: CGTCGAAAGCCTGGAGAAGGGTCTAGAAAGCAGCCAGCTTCTGGACCAGGAGCACACAGTCAGTGAGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | GAGAGATCCCTGCCATTGACCGCAATGATTTTGTCATaGACCTCCAGGCCATCTGCTCGGTCTGCAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ERSLPLTAMILS*TSRPSARSAGP Trigger: CGGACCTGCAGACCGAGCAGATGGCCTGGAGGTTCATGACAAAATCATTGCGGTCAATGGCAGGGATCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | AATCCCCCATCATGCAATGCCCAGATGTCTCCGTATTaGTCCGTCACTTTCTGGAGCCTGTGGGCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: NPPSCNAQMSPY*SVTFWSLWACM Trigger: CATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGGGGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | GAGAGGTATGGAGGATGCTCACTGACTGTGTGCTCCTaGTCCAGAAGCTGGCTGCTTTCTAGACCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERYGGCSLTVCS*SRSWLLSRPFS Trigger: GGAGAAGGGTCTAGAAAGCAGCCAGCTTCTGGACCAGGAGCACACAGTCAGTGAGCATCCTCCATACCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | GAATCCCCCATCATGCAATGCCCAGATGTCTCCGTATaGGTCCGTCACTTTCTGGAGCCTGTGGGCCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ESPIMQCPDVSV*VRHFLEPVGLH Trigger: ATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGGGGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | TCTAAGCACTCACCCCCAGCACAACTCTCACTGCATTaGTGCTCAAGGCTCCCTAGCGTGTCTTGGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKHSPPAQLSLH*CSRLPSVSWLF Trigger: GAAGAGCCAAGACACGCTAGGGAGCCTTGAGCATCAATGCAGTGAGAGTTGTGCTGGGGGTGAGTGCTTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | ATCCCAAAGTGTCATCTTCTCTTTCCAACACAACAGTaGACGGCTTCTGCTCTCCATCCTGGCCGCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IPKCHLLFPTQQ*TASALHPGRGL Trigger: GAGGCCGCGGCCAGGATGGAGAGCAGAAGCCGTTCACTGTTGTGTTGGAAAGAGAAGATGACACTTTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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| CDS CCA 72 bp | AATGCCCAGATGTCTCCGTATTGGTCCGTCACTTTCTaGAGCCTGTGGGCCTGCATGATGTTCTGGCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: NAQMSPYWSVTF*SLWACMMFWHS Trigger: AGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | TTTTTGTGGCTCAGTTCGATGATGCTCAGCTCCTTCTaGCCTTCGCCGCTGCTCTGTGGGCTCTCTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLWLSSMMLSSF*PSPLLCGLSLR Trigger: CCTCAAAGAGAGCCCACAGAGCAGCGGCGAAGGCAAGAAGGAGCTGAGCATCATCGAACTGAGCCACAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | ATTGGTCCGTCACTTTCTGGAGCCTGTGGGCCTGCATaGTGTTCTGGCACTCTAGCTCAATGTTTCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGPSLSGACGPA*CSGTLAQCFAA Trigger: AGCTGCGAAACATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | ACGACACAGCTCGACCTCCTCATATTCAAAGTCATCTaGTCTGTCTGCATCAGCGGGCAAGCTGGAGACGTA | + |
|
Preference number: 6 (lower is better) Translates to: TTQLDLLIFKVI*SVCISGQAGDV Trigger: TACGTCTCCAGCTTGCCCGCTGATGCAGACAGAGCAGATGACTTTGAATATGAGGAGGTCGAGCTGTGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | TGCAGCTCAGAGGCTGTGCGCTGTGCTCCTTCATTATaGTCTTCCTCCAGCAGCTCTGAGTTTAACTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSEAVRCAPSL*SSSSSSEFNSS Trigger: AGAGGAGTTAAACTCAGAGCTGCTGGAGGAAGACCATAATGAAGGAGCACAGCGCACAGCCTCTGAGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | ATGTCTCCGTATTGGTCCGTCACTTTCTGGAGCCTGTaGGCCTGCATGATGTTCTGGCACTCTAGCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MSPYWSVTFWSL*ACMMFWHSSSM Trigger: CATTGAGCTAGAGTGCCAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
||
| CDS CAA 90 bp | GTAATTTCGGAATCCCCCATCATGCAATGCCCAGATGTCTCCGTATaGGTCCGTCACTTTCTGGAGCCTGTGGGCCTGCATGATGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VISESPIMQCPDVSV*VRHFLEPVGLHDVL Trigger: CAGAACATCATGCAGGCCCACAGGCTCCAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGGGGGATTCCGAAATTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | ATATCTGTAGGAGGAGCTGTGATAAGGAGAGAGGTATaGAGGATGCTCACTGACTGTGTGCTCCTGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVGGAVIRREV*RMLTDCVLLVQ Trigger: CTGGACCAGGAGCACACAGTCAGTGAGCATCCTCCATACCTCTCTCCTTATCACAGCTCCTCCTACAGATAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | CTTTCGACGCTGCAACCTTCATCGGTGGCTTTGACTTaGGTAGATGTGTATTCCCTGGTGCTCTGTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSTLQPSSVALT*VDVYSLVLCLG Trigger: TCCCAGACAGAGCACCAGGGAATACACATCTACCAAAGTCAAAGCCACCGATGAAGGTTGCAGCGTCGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | GCACGTTCCTTCAGAAGTCGGTCTCTCACTGGCCTCTaGGTGATGTACCGGGTCCCATCACTCCTAATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARSFRSRSLTGL*VMYRVPSLLIF Trigger: AAAAATTAGGAGTGATGGGACCCGGTACATCACCAAGAGGCCAGTGAGAGACCGACTTCTGAAGGAACGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 90 bp | ATGTACCGGGTCCCATCACTCCTAATTTTTACCTTCCATTCCATCTaGGGCTCCGAGCCCCTTTGTGATTCCTTGCACATGCTCACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MYRVPSLLIFTFHSI*GSEPLCDSLHMLTK Trigger: CTTGGTGAGCATGTGCAAGGAATCACAAAGGGGCTCGGAGCCCAAGATGGAATGGAAGGTAAAAATTAGGAGTGATGGGACCCGGTACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS GCA 72 bp | GCTGGTGTTGTAATTTCGGAATCCCCCATCATGCAATaGCCAGATGTCTCCGTATTGGTCCGTCACTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGVVISESPIMQ*PDVSVLVRHFL Trigger: CAGAAAGTGACGGACCAATACGGAGACATCTGGGCATTGCATGATGGGGGATTCCGAAATTACAACACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | CAAAGTCATCTGCTCTGTCTGCATCAGCGGGCAAGCTaGAGACGTACTCATGGTCTTCATAAAACCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: QSHLLCLHQRAS*RRTHGLHKTHA Trigger: AGCATGGGTTTTATGAAGACCATGAGTACGTCTCCAGCTTGCCCGCTGATGCAGACAGAGCAGATGACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | TGTAGCTTTGATAATGCCGGGCATGCGCCGGAATGTTaGCATATCTGTAGGAGGAGCTGTGATAAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: CSFDNAGHAPEC*HICRRSCDKER Trigger: TCTCTCCTTATCACAGCTCCTCCTACAGATATGCCAACATTCCGGCGCATGCCCGGCATTATCAAAGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | TGTAAAATACGATCCCCTTCTCGAATCCGGCCATCCTaGGCAGCAATGCTATTTGGGTCAACCTCGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: CKIRSPSRIRPS*AAMLFGSTSLT Trigger: TGTCAGCGAGGTTGACCCAAATAGCATTGCTGCCAAGGATGGCCGGATTCGAGAAGGGGATCGTATTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | TTCTGGGTGTTCCATGATGTCATCCAGTTTCCCCCGTaGCACATCCAGGCTGGTGTTGTAATTTCGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: FWVFHDVIQFPP*HIQAGVVISES Trigger: GGATTCCGAAATTACAACACCAGCCTGGATGTGCAACGGGGGAAACTGGATGACATCATGGAACACCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | GATGTGTATTCCCTGGTGCTCTGTCTGGGAGGGGACTaGTGGGCTGTCATCATGCTTCTCAGATTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: DVYSLVLCLGGD*WAVIMLLRFFL Trigger: TAAGAAAAATCTGAGAAGCATGATGACAGCCCATCAGTCCCCTCCCAGACAGAGCACCAGGGAATACACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 72 bp | GTCCCATCACTCCTAATTTTTACCTTCCATTCCATCTaGGGCTCCGAGCCCCTTTGTGATTCCTTGCACATG | + |
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Preference number: 6 (lower is better) Translates to: VPSLLIFTFHSI*GSEPLCDSLHM Trigger: CATGTGCAAGGAATCACAAAGGGGCTCGGAGCCCAAGATGGAATGGAAGGTAAAAATTAGGAGTGATGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CAA 90 bp | ATCTTTAAGGCACGTTCCTTCAGAAGTCGGTCTCTCACTGGCCTCTaGGTGATGTACCGGGTCCCATCACTCCTAATTTTTACCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: IFKARSFRSRSLTGL*VMYRVPSLLIFTFH Trigger: ATGGAAGGTAAAAATTAGGAGTGATGGGACCCGGTACATCACCAAGAGGCCAGTGAGAGACCGACTTCTGAAGGAACGTGCCTTAAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS CCA 72 bp | TCTCAGATTTTTCTTATTGGTGAGGTTGATCATTCTTaGAAGGGAACTGTCCGGGGACCTGTCTACAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SQIFLIGEVDHS*KGTVRGPVYSQ Trigger: CTGACTGTAGACAGGTCCCCGGACAGTTCCCTTCCAAGAATGATCAACCTCACCAATAAGAAAAATCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035399.10 ENSMUST00000169942.10 |
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| CDS TCA 72 bp | TCTGGGAATTCTGATATGGGCGGCCTCCTATTATGTTaGATCCCAAAGTGTCATCTTCTCTTTCCAACACAA | + |
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Preference number: 6 (lower is better) Translates to: SGNSDMGGLLLC*IPKCHLLFPTQ Trigger: TTGTGTTGGAAAGAGAAGATGACACTTTGGGATTCAACATAATAGGAGGCCGCCCATATCAGAATTCCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169942.10 |
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