Pregenerated sensors for PDZK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038298Ensembl transcript IDs: ENSMUST00000058865.14, ENSMUST00000107069.8, ENSMUST00000107070.8, ENSMUST00000128789.2, ENSMUST00000135031.8, ENSMUST00000138014.8, ENSMUST00000153256.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCAACAACAGACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTaGCGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KQQQTVWGTDGPEEV*RGRQGSFLGEAVPG Trigger: CCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTCTGTTGTTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153256.3 |
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| 3UTR TCA 90 bp | TTACAACAACAGACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTaGCGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LQQQTVWGTDGPEEV*RGRQGSFLGEAVPG Trigger: CCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTCTGTTGTTGTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR CCA 90 bp | CGGGTTGGCTTTCCCTCTGCCTCAGCGCTGGAGGTAGACGTTAACTaGAACAAGCCCTTTCCTGTTCTGAAACATAAGCCCTCCGACAGT | + |
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Preference number: 1 (lower is better) Translates to: RVGFPSASALEVDVN*NKPFPVLKHKPSDS Trigger: ACTGTCGGAGGGCTTATGTTTCAGAACAGGAAAGGGCTTGTTCCAGTTAACGTCTACCTCCAGCGCTGAGGCAGAGGGAAAGCCAACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
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| 3UTR TCA 90 bp | CCAGGTGCTCAAGCCTGCAGAAGGAAGAGGTCTCATCAACAGAAGTaGAAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: PGAQACRRKRSHQQK*KVALWKIPHRKTLN Trigger: GTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTTCTGCAGGCTTGAGCACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR TCA 90 bp | AGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATaGGAAAGCATGAAATGTTTGTATGGAACAAAGACACTATTCGGA | + |
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Preference number: 1 (lower is better) Translates to: RPQCVFCMFWASGSK*ESMKCLYGTKTLFG Trigger: TCCGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR CCA 90 bp | GTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATaGAACAAAGACACTATTCGGATTCTATTAGCCAACAGGGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: VLGFWKQMRKHEMFV*NKDTIRILLANREV Trigger: AACTTCCCTGTTGGCTAATAGAATCCGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR TCA 90 bp | GTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATaGAATGTTTGTATGGAACAAAGACACTATTCGGATTCTATTAGC | + |
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Preference number: 1 (lower is better) Translates to: VYFACFGLLEANEKA*NVCMEQRHYSDSIS Trigger: GCTAATAGAATCCGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAACATGCAAAATACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCCGGAGAGGCAGTTCCTaGGCCCTCAAGAGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLRRGSS*ALKRKH Trigger: ATGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCG...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATCGGAGAGGCAGTTCCTaGGCCCTCAAGAGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHRRGSS*ALKRKH Trigger: ATGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCG...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| 3UTR-3UTR CCA 90 bp | GCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTAGTCTGGGGGACAGATaGTCCAGAGGAGGTCTGACG | + |
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Preference number: 2 (lower is better) Translates to: ALWKIPHRKTLNLVPPLASLGDR*SRGGLT Trigger: CGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACT...AGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACGGTCCAGAGGAGGTCTaGCGGGGTCGGCAGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: EGRGLINRSEKLHFGRYHGPEEV*RGRQGS Trigger: TGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACC...GTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGTAGACGTTAACTGGAACAAGCCCTTTCCTGTTCTGAAACATAAGCCCCGGAGAGGCAGTTCCTaGGCCCTCAAGAGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LEVDVNWNKPFPVLKHKPRRGSS*ALKRKH Trigger: ATGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCG...GGGCTTATGTTTCAGAACAGGAAAGGGCTTGTTCCAGTTAACGTCTACCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGCACACTTCTATAACAGGCATCTGCTTGATTCTTTAATTAGCAGCGCTGGTCCAGAGGAGGTCTaGCGGGGTCGGCAGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TKAHFYNRHLLDSLISSAGPEEV*RGRQGS Trigger: TGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACC...AGCGCTGCTAATTAAAGAATCAAGCAGATGCCTGTTATAGAAGTGTGCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGTAGACGTTAACTGGAACAAGCCCTTTCCTGTTCTGAAACATAAGCCCCGCTCACATGGACAGTaGATCATCCCAGGTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LEVDVNWNKPFPVLKHKPRSHGQ*IIPGAQ Trigger: TTGAGCACCTGGGATGATTCACTGTCCATGTGAGCG...GGGCTTATGTTTCAGAACAGGAAAGGGCTTGTTCCAGTTAACGTCTACCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGATCTCATCAACAGAAGTaGAAAGTTGCACTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LPLLLRPQCVFCMFWASGSHQQK*KVALWK Trigger: CTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGA...TCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGCTTCTGGAAGCAAATaGGAAAGCATGAAATGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SWKPPFITKTTVCILHVLASGSK*ESMKCL Trigger: CAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGC...CAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR CAA 90 bp | AAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTaGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: KPPFITKTTVCILHV*GFWKQMRKHEMFVW Trigger: CCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR TCA 72 bp | CAGACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTaGCGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QTVWGTDGPEEV*RGRQGSFLGEA Trigger: TGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| 3UTR CCA 72 bp | GCAGCCCTTACAACAACAGACAGTCTGGGGGACAGATaGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: AALTTTDSLGDR*SRGGLTGSAGL Trigger: GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTCTGTTGTTGTAAGGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR CCA 72 bp | GGTGCTCAAGCAACAACAGACAGTCTGGGGGACAGATaGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: GAQATTDSLGDR*SRGGLTGSAGL Trigger: GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTCTGTTGTTGCTTGAGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153256.3 |
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| 3UTR CCA 72 bp | ATGTTCCGTGCTAATCCAGCAGTGGCTGGCTCGGGTTaGCTTTCCCTCTGCCTCAGCGCTGGAGGTAGACGT | + |
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Preference number: 3 (lower is better) Translates to: MFRANPAVAGSG*LSLCLSAGGRR Trigger: ACGTCTACCTCCAGCGCTGAGGCAGAGGGAAAGCCAACCCGAGCCAGCCACTGCTGGATTAGCACGGAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
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| 3UTR CCA 72 bp | TTTCCCTCTGCCTCAGCGCTGGAGGTAGACGTTAACTaGAACAAGCCCTTTCCTGTTCTGAAACATAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FPSASALEVDVN*NKPFPVLKHKP Trigger: GGGCTTATGTTTCAGAACAGGAAAGGGCTTGTTCCAGTTAACGTCTACCTCCAGCGCTGAGGCAGAGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
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| 3UTR TCA 72 bp | CAAGCCTGCAGAAGGAAGAGGTCTCATCAACAGAAGTaGAAAGTTGCACTTTGGAAGATACCACATAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: QACRRKRSHQQK*KVALWKIPHRK Trigger: CTTTCTATGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTTCTGCAGGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGAACAGAAGTGAAAAGTaGCACTTTGGAAGATACCAC | + |
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Preference number: 3 (lower is better) Translates to: PFITKTTVCILHVLGFWKNRSEK*HFGRYH Trigger: GTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTT...CTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR CCA 72 bp | TTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATaGAACAAAGACACTATTCGGATTCTATTAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: FWKQMRKHEMFV*NKDTIRILLAN Trigger: GTTGGCTAATAGAATCCGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCTGGGCTCTGAGCCTGTaGCCTCCAGAGGAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAWALSL*PPEEQG Trigger: TCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCA...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCCCCCGCCTTCTCTGCTaGGCTCCCCTCCTCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLPRLLC*APLLNH Trigger: GTGATTGAGGAGGGGAGCCCAGCAGAGAAGGCGGGG...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGCAGGTAGCAGAGCCGTaGCTGGGCACACGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEQVAEP*LGTRLH Trigger: GTGGAGCCGTGTGCCCAGCCACGGCTCTGCTACCTG...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCTGGGCTCTGAGCCTGTaGCCTCCAGAGGAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLWALSL*PPEEQG Trigger: TCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCA...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | TCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCCCTCCGCGTCCTCTGTaGGCTCTGAGCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGGQMVQRRSDGVGRAHSPPRPL*ALSLWP Trigger: AGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGG...GGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCCTCCGCGTCCTCTGTaGGCTCTGAGCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VQRRSDGVGRAHSSERQFPPRPL*ALSLWP Trigger: AGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGG...GAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCCCTCCGCGTCCTCTGTaGGCTCTGAGCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GRQGSFLGEAVPGPSRGSPPRPL*ALSLWP Trigger: AGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGG...GCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCCCCCGCCTTCTCTGCTaGGCTCCCCTCCTCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: GRQGSFLGEAVPGPSRGSPRLLC*APLLNH Trigger: GTGATTGAGGAGGGGAGCCCAGCAGAGAAGGCGGGG...GCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGCCCCGCCTTCTCTGCTaGGCTCCCCTCCTCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEPRLLC*APLLNH Trigger: GTGATTGAGGAGGGGAGCCCAGCAGAGAAGGCGGGG...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGGCCAGCTGCCTCTGCTaGGCTCCCGGGTTCTATGTC | + |
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Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEASCLC*APGFYV Trigger: GACATAGAACCCGGGAGCCCAGCAGAGGCAGCTGGC...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCACCTCCGCGTCCTCTGTaGGCTCTGAGCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEAPPRPL*ALSLWP Trigger: AGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGG...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATGCAGCCTGCAGAGCTTaGGCTTGTGACCCTCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHAACRA*ACDPPR Trigger: ACGCGGAGGGTCACAAGCCCAAGCTCTGCAGGCTGC...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCCAGGGGCTCGGCCATaGAGGAAACGATGGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAPGARP*RKRWGF Trigger: AAATCCCCATCGTTTCCTCCATGGCCGAGCCCCTGG...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCGCTTCCCGCTGCTCTTaGTTCTCTCCACCACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAASRCS*FSPPLC Trigger: ACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGC...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCCACAGACCAACAGAGTaGCGTGCTTCCCGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLHRPTE*RASRCS Trigger: AGAGCAGCGGGAAGCACGTCACTCTGTTGGTCTGTG...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGCAAGCCAGCTGCCTCTaGTGGGCTCCCGGGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEQASCL*WAPGFY Trigger: ATAGAACCCGGGAGCCCAGCAGAGGCAGCTGGCTTG...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCACTACCACCCGGGGCTaGTGGGGCAGCAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLTTTRG*WGSSFK Trigger: TTTGAAACTGCTGCCCCACCAGCCCCGGGTGGTAGT...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCAGCCAGCTGCCTCTGCTaGGCTCCCGGGTTCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEAASCLC*APGFYV Trigger: GACATAGAACCCGGGAGCCCAGCAGAGGCAGCTGGC...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCCCAGGGGCTCGGCCATaGAGGAAACGATGGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLPGARP*RKRWGF Trigger: AAATCCCCATCGTTTCCTCCATGGCCGAGCCCCTGG...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGGCTTCCCGCTGCTCTTaGTTCTCTCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGSAGLIPRRGSSWALKASRCS*FSPPLC Trigger: ACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGC...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATCACAGACCAACAGAGTaGCGTGCTTCCCGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHHRPTE*RASRCS Trigger: AGAGCAGCGGGAAGCACGTCACTCTGTTGGTCTGTG...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCAGAAGCCAAAGCTGTTaGCCTCCTTCACCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWARSQSC*PPSPGS Trigger: GCTACCTGGTGAAGGAGGGCAACAGCTTTGGCTTCT...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATACTACCACCCGGGGCTaGTGGGGCAGCAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHTTTRG*WGSSFK Trigger: TTTGAAACTGCTGCCCCACCAGCCCCGGGTGGTAGT...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGGCCTCCCTCTGGCTTTaGTCCAGCTCTTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGSAGLIPRRGSSWALKASLWL*SSSFKS Trigger: GGATTTGAAAGAGCTGGATCAAAGCCAGAGGGAGGC...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCACATTGCTGCCCTTCTTaGTCACTACCACCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEAHCCPS*SLPPGA Trigger: AGCCCCGGGTGGTAGTGATCAAGAAGGGCAGCAATG...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGGCTTCCCGCTGCTCTTaGTTCTCTCCACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEASRCS*FSPPLC Trigger: ACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGC...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCGAGCCAGGCTATAGATaGTCTCTGCCTCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAEPGYR*SLPLCP Trigger: TGGACAAAGAGGCAGAGAGCATCTATAGCCTGGCTC...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCATCACCCGGATCAGGTaGCCATCAGTGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRQGSFLGEAVPGPSRGSITRIR*PSVSFS Trigger: TGAGAAGGACACTGATGGTCACCTGATCCGGGTGAT...GCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATATCACCCGGATCAGGTaGCCATCAGTGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHITRIR*PSVSFS Trigger: TGAGAAGGACACTGATGGTCACCTGATCCGGGTGAT...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTGCCTCCCTCTGGCTTTaGTCCAGCTCTTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGDRWSRGGLTGSAGLIPASLWL*SSSFKS Trigger: GGATTTGAAAGAGCTGGATCAAAGCCAGAGGGAGGC...AGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCGCCTCCCTCTGGCTTTaGTCCAGCTCTTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGGQMVQRRSDGVGRAHSASLWL*SSSFKS Trigger: GGATTTGAAAGAGCTGGATCAAAGCCAGAGGGAGGC...GGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCGCTATAGATGCTCTCTaGCTCTTTGTCCAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAAIDAL*LFVQHQ Trigger: TTGGTGCTGGACAAAGAGGCAGAGAGCATCTATAGC...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGTGGCTGTCTCCCTCTTaGATTGTGTCTTCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGSAGLIPRRGSSWALKWLSPS*IVSSVH Trigger: GTGAACAGAAGACACAATTCAAGAGGGAGACAGCCA...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCATGTCCTTAATGATTTaGCCTTTCTGTTCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLTGSAGLIPRRGSSWAMSLMI*PFCSGP Trigger: GGGGCCTGAACAGAAAGGTCAAATCATTAAGGACAT...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCGCTATAGATGCTCTCTaGCTCTTTGTCCAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLAIDAL*LFVQHQ Trigger: TTGGTGCTGGACAAAGAGGCAGAGAGCATCTATAGC...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCATCAGCAGGGCCACCCTaGTGTACCTCTTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEASAGPP*CTSLTK Trigger: CTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGA...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGTGGCTGTCTCCCTCTTaGATTGTGTCTTCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEWLSPS*IVSSVH Trigger: GTGAACAGAAGACACAATTCAAGAGGGAGACAGCCA...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTGGCTGTCTCCCTCTTaGATTGTGTCTTCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHWLSPS*IVSSVH Trigger: GTGAACAGAAGACACAATTCAAGAGGGAGACAGCCA...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCGCTATAGATGCTCTCTaGCTCTTTGTCCAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQRRSDGVGRAHSSERQFAIDAL*LFVQHQ Trigger: TTGGTGCTGGACAAAGAGGCAGAGAGCATCTATAGC...GAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GACAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCGTCTTCTGTTCACTATaGCACCTGGCAGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLGDRWSRGGLTGSAGLVFCSL*HLAVSL Trigger: CAAAGAAACTGCCAGGTGCCATAGTGAACAGAAGAC...GAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGTGGGCTCTGAGCCTGTaGCCTCCAGAGGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKWALSL*PPEEQG Trigger: TCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCA...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | AGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGGAAGAGCAGCCTGCAGAGCTTaGGCTTGTGACCCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAHMDSESSQVLKPAEGRAACRA*ACDPPR Trigger: ACGCGGAGGGTCACAAGCCCAAGCTCTGCAGGCTGC...TCTTCCTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATATGTCCTTAATGATTTaGCCTTTCTGTTCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSGGQMVQRRSDGVGRAHMSLMI*PFCSGP Trigger: GGGGCCTGAACAGAAAGGTCAAATCATTAAGGACAT...ATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGATGTCCTTAATGATTTaGCCTTTCTGTTCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QMVQRRSDGVGRAHSSERMSLMI*PFCSGP Trigger: GGGGCCTGAACAGAAAGGTCAAATCATTAAGGACAT...CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGGAAGAGCACAGACCAACAGAGTaGCGTGCTTCCCGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALTWTVNHPRCSSLQKEEHRPTE*RASRCS Trigger: AGAGCAGCGGGAAGCACGTCACTCTGTTGGTCTGTG...CTCTTCCTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCAGCTATAGATGCTCTCTaGCTCTTTGTCCAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEAAIDAL*LFVQHQ Trigger: TTGGTGCTGGACAAAGAGGCAGAGAGCATCTATAGC...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCGTTCACTATGGCACCTaGCAGTTTCTTTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRQGSFLGEAVPGPSRGSVHYGT*QFLCPQ Trigger: TTGTGGACAAAGAAACTGCCAGGTGCCATAGTGAAC...GCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGGTTCACTATGGCACCTaGCAGTTTCTTTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QMVQRRSDGVGRAHSSERVHYGT*QFLCPQ Trigger: TTGTGGACAAAGAAACTGCCAGGTGCCATAGTGAAC...CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCGTTCACTATGGCACCTaGCAGTTTCTTTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQRRSDGVGRAHSSERQFVHYGT*QFLCPQ Trigger: TTGTGGACAAAGAAACTGCCAGGTGCCATAGTGAAC...GAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGGTCTTCTGTTCACTATaGCACCTGGCAGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSEVFCSL*HLAVSL Trigger: CAAAGAAACTGCCAGGTGCCATAGTGAACAGAAGAC...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCAGTGGCTGGCTCGGGTTGGCTTTCCCTCTGCCTCAGCGCTGGAGGTGTTCACTATGGCACCTaGCAGTTTCTTTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NPAVAGSGWLSLCLSAGGVHYGT*QFLCPQ Trigger: TTGTGGACAAAGAAACTGCCAGGTGCCATAGTGAAC...ACCTCCAGCGCTGAGGCAGAGGGAAAGCCAACCCGAGCCAGCCACTGCTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGACTACCACCCGGGGCTaGTGGGGCAGCAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKTTTRG*WGSSFK Trigger: TTTGAAACTGCTGCCCCACCAGCCCCGGGTGGTAGT...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGACCAACAGAGTAGTCTaGTCTCCACCTTTTCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: QMVQRRSDGVGRAHSSERTNRVV*SPPFLI Trigger: GATTAGAAAAGGTGGAGACCAGACTACTCTGTTGGT...CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CCA 90 bp | GGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCACCAACAGAGTAGTCTaGTCTCCACCTTTTCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GRQGSFLGEAVPGPSRGSTNRVV*SPPFLI Trigger: GATTAGAAAAGGTGGAGACCAGACTACTCTGTTGGT...GCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CCA 90 bp | GGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGACCAACAGAGTAGTCTaGTCTCCACCTTTTCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GQMVQRRSDGVGRAHSSETNRVV*SPPFLI Trigger: GATTAGAAAAGGTGGAGACCAGACTACTCTGTTGGT...CTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTACCAACAGAGTAGTCTaGTCTCCACCTTTTCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LGDRWSRGGLTGSAGLIPTNRVV*SPPFLI Trigger: GATTAGAAAAGGTGGAGACCAGACTACTCTGTTGGT...AGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CCA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGACACCCTTTTTACCTTaGATAGTTTTCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGSAGLIPRRGSSWALKTPFLP*IVFREK Trigger: CTTCTCTCTGAAAACTATCCAAGGTAAAAAGGGTGT...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCATCTTTCAAATCCACCTaGTTTTTCACAGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRAHSSERQFLGPQEEASFKST*FFTAFS Trigger: TGAGAAGGCTGTGAAAAATCAGGTGGATTTGAAAGA...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGGCCTCCCTCTGGCTTTaGTCCAGCTCTTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKASLWL*SSSFKS Trigger: GGATTTGAAAGAGCTGGATCAAAGCCAGAGGGAGGC...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGAGAAGCCAAAGCTGTTaGCCTCCTTCACCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKRSQSC*PPSPGS Trigger: GCTACCTGGTGAAGGAGGGCAACAGCTTTGGCTTCT...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGACACCCTTTTTACCTTaGATAGTTTTCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMVQRRSDGVGRAHSSERTPFLP*IVFREK Trigger: CTTCTCTCTGAAAACTATCCAAGGTAAAAAGGGTGT...CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTTGGGCTCTGAGCCTGTaGCCTCCAGAGGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVALWKIPHRKTLNLVPPWALSL*PPEEQG Trigger: TCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCA...AGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTGCAGCCTGCAGAGCTTaGGCTTGTGACCCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KVALWKIPHRKTLNLVPPAACRA*ACDPPR Trigger: ACGCGGAGGGTCACAAGCCCAAGCTCTGCAGGCTGC...AGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTTCAGCAGGGCCACCCTaGTGTACCTCTTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALWKIPHRKTLNLVPPLASAGPP*CTSLTK Trigger: CTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGA...AGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGTAGACGTTAACTGGAACAAGCCCTTTCCTGTTCTGAAACATAAGCCCACTACCACCCGGGGCTaGTGGGGCAGCAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVDVNWNKPFPVLKHKPTTTRG*WGSSFK Trigger: TTTGAAACTGCTGCCCCACCAGCCCCGGGTGGTAGT...GGGCTTATGTTTCAGAACAGGAAAGGGCTTGTTCCAGTTAACGTCTACCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058865.14 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGTGGCTGTCTCCCTCTTaGATTGTGTCTTCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKWLSPS*IVSSVH Trigger: GTGAACAGAAGACACAATTCAAGAGGGAGACAGCCA...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACGCCAGCTGCCTCTGCTaGGCTCCCGGGTTCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGLINRSEKLHFGRYHASCLC*APGFYV Trigger: GACATAGAACCCGGGAGCCCAGCAGAGGCAGCTGGC...GTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | AAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCCAGGGGCTCGGCCATaGAGGAAACGATGGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KVALWKIPHRKTLNLVPPPGARP*RKRWGF Trigger: AAATCCCCATCGTTTCCTCCATGGCCGAGCCCCTGG...AGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGATGTCCTTAATGATTTaGCCTTTCTGTTCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAALTWTVNHPRCSSLQKMSLMI*PFCSGP Trigger: GGGGCCTGAACAGAAAGGTCAAATCATTAAGGACAT...CTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGCTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACACCCCGCCTTCTCTGCTaGGCTCCCCTCCTCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEEVSSTEVKSCTLEDTTPRLLC*APLLNH Trigger: GTGATTGAGGAGGGGAGCCCAGCAGAGAAGGCGGGG...TGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAGCAGCCTGCAGAGCTTaGGCTTGTGACCCTCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLLRPQCVFCMFWASGAACRA*ACDPPR Trigger: ACGCGGAGGGTCACAAGCCCAAGCTCTGCAGGCTGC...TCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | CTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGACATTGCTGCCCTTCTTaGTCACTACCACCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLLRPQCVFCMFWASGHCCPS*SLPPGA Trigger: AGCCCCGGGTGGTAGTGATCAAGAAGGGCAGCAATG...TCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | TCCTGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGCATTGCTGCCCTTCTTaGTCACTACCACCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWKPPFITKTTVCILHVLHCCPS*SLPPGA Trigger: AGCCCCGGGTGGTAGTGATCAAGAAGGGCAGCAATG...CAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | CCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCCACAGACCAACAGAGTaGCGTGCTTCCCGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLLRPQCVFCMFWASGSHRPTE*RASRCS Trigger: AGAGCAGCGGGAAGCACGTCACTCTGTTGGTCTGTG...GCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | AAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTGAGCCAGGCTATAGATaGTCTCTGCCTCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVALWKIPHRKTLNLVPPEPGYR*SLPLCP Trigger: TGGACAAAGAGGCAGAGAGCATCTATAGCCTGGCTC...AGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | GCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGCAGAAGGAAGAGACACCCTTTTTACCTTaGATAGTTTTCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTWTVNHPRCSSLQKEETPFLP*IVFREK Trigger: CTTCTCTCTGAAAACTATCCAAGGTAAAAAGGGTGT...CTCTTCCTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | ACAAAAGCACACTTCTATAACAGGCATCTGCTTGATTCTTTAATTAGCAGCGCTCATTGCTGCCCTTCTTaGTCACTACCACCCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKAHFYNRHLLDSLISSAHCCPS*SLPPGA Trigger: AGCCCCGGGTGGTAGTGATCAAGAAGGGCAGCAATG...AGCGCTGCTAATTAAAGAATCAAGCAGATGCCTGTTATAGAAGTGTGCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR TCA 90 bp | CCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGATCACCCGGATCAGGTaGCCATCAGTGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFITKTTVCILHVLGFWKITRIR*PSVSFS Trigger: TGAGAAGGACACTGATGGTCACCTGATCCGGGTGAT...CTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGAGAAGCCAAAGCTGTTaGCCTCCTTCACCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFITKTTVCILHVLGFWKRSQSC*PPSPGS Trigger: GCTACCTGGTGAAGGAGGGCAACAGCTTTGGCTTCT...CTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACAAGAAGCCAAAGCTGTTaGCCTCCTTCACCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEEVSSTEVKSCTLEDTTRSQSC*PPSPGS Trigger: GCTACCTGGTGAAGGAGGGCAACAGCTTTGGCTTCT...TGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGATCAGCAGGGCCACCCTaGTGTACCTCTTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLLRPQCVFCMFWASGSAGPP*CTSLTK Trigger: CTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGA...TCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGGAGCCAGGCTATAGATaGTCTCTGCCTCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFITKTTVCILHVLGFWKEPGYR*SLPLCP Trigger: TGGACAAAGAGGCAGAGAGCATCTATAGCCTGGCTC...CTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR GCA 90 bp | ACAAAAGCACACTTCTATAACAGGCATCTGCTTGATTCTTTAATTAGCAGCGCTGAGCCAGGCTATAGATaGTCTCTGCCTCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAHFYNRHLLDSLISSAEPGYR*SLPLCP Trigger: TGGACAAAGAGGCAGAGAGCATCTATAGCCTGGCTC...AGCGCTGCTAATTAAAGAATCAAGCAGATGCCTGTTATAGAAGTGTGCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR GCA 90 bp | TTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATCAGCAGGGCCACCCTaGTGTACCTCTTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRPQCVFCMFWASGSKSAGPP*CTSLTK Trigger: CTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGA...TTTGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCGTCTTCTGTTCACTATaGCACCTGGCAGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLRPQCVFCMFWASGSVFCSL*HLAVSL Trigger: CAAAGAAACTGCCAGGTGCCATAGTGAACAGAAGAC...GCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR TCA 90 bp | TCCTGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGTCTTTCAAATCCACCTaGTTTTTCACAGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWKPPFITKTTVCILHVLSFKST*FFTAFS Trigger: TGAGAAGGCTGTGAAAAATCAGGTGGATTTGAAAGA...CAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| 3UTR CAA 72 bp | AAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTaGCATGTTTTGGGCTTCTGGAAGCAAATGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPPFITKTTVCI*HVLGFWKQMRK Trigger: CTTTCTCATTTGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCACACTTCTATAACAGGCATCTGCTTGATTCTTTAATTAGCAGCGCTACACCCTTTTTACCTTaGATAGTTTTCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKAHFYNRHLLDSLISSATPFLP*IVFREK Trigger: CTTCTCTCTGAAAACTATCCAAGGTAAAAAGGGTGT...AGCGCTGCTAATTAAAGAATCAAGCAGATGCCTGTTATAGAAGTGTGCTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| 3UTR CAA 72 bp | TTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTaGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FITKTTVCILHV*GFWKQMRKHEM Trigger: CATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS TCA 90 bp | CCTGCAGAGCTTGGGCTTGTGACCCTCCGCGTCCTCTGTGGGCTCTaGGCCTGTGGCCTCCAGAGGAGCAGGGATCGGAGCTGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAELGLVTLRVLCGL*ACGLQRSRDRSWAF Trigger: GAAGGCCCAGCTCCGATCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGGGTCACAAGCCCAAGCTCTGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CAA 90 bp | GGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCTGCGCATGCTCCTCCTaGTCGACAAAGACACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLTGSAGLIPRRGSSWACACSS*STKTPL Trigger: CAATGGTGTCTTTGTCGACAAGGAGGAGCATGCGCA...GGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CAA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGTGCGCATGCTCCTCCTaGTCGACAAAGACACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGSAGLIPRRGSSWALKCACSS*STKTPL Trigger: CAATGGTGTCTTTGTCGACAAGGAGGAGCATGCGCA...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS GCA 90 bp | TGCGAGGCTGTGCTGAGAGTTCGGTCTTTTGCTGGGTGGGCGTCATaGTCGGACTCCGCAGACGTCTCTCCTTTTTCATCAGGGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CEAVLRVRSFAGWAS*SDSADVSPFSSGPA Trigger: GGCTGGCCCTGATGAAAAAGGAGAGACGTCTGCGGAGTCCGAGCATGACGCCCACCCAGCAAAAGACCGAACTCTCAGCACAGCCTCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS TCA 90 bp | TCTCCAGCCCAGCCTTGTCAGCAGGGCCACCCTGCTGTACCTCTTTaGCAAAGGAGCCAGGCTGACCCCGAATGGCATTCAGGTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAQPCQQGHPAVPL*QRSQADPEWHSGES Trigger: GCTTTCACCTGAATGCCATTCGGGGTCAGCCTGGCTCCTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGACAAGGCTGGGCTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CAA 90 bp | GTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCATGCGCATGCTCCTCCTaGTCGACAAAGACACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRAHSSERQFLGPQEEACACSS*STKTPL Trigger: CAATGGTGTCTTTGTCGACAAGGAGGAGCATGCGCA...TGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CAA 90 bp | CTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGCTGGCTGTCTCCCTCTaGAATTGTGTCTTCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTGSAGLIPRRGSSWALKLAVSL*NCVFCS Trigger: TGAACAGAAGACACAATTCAAGAGGGAGACAGCCAG...CTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCTGGCTGTCTCCCTCTaGAATTGTGTCTTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LGDRWSRGGLTGSAGLIPLAVSL*NCVFCS Trigger: TGAACAGAAGACACAATTCAAGAGGGAGACAGCCAG...AGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS CCA 90 bp | GACGAAGAGTGCGAGGCTGTGCTGAGAGTTCGGTCTTTTGCTGGGTaGGCGTCATGCTCGGACTCCGCAGACGTCTCTCCTTTTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: DEECEAVLRVRSFAG*ASCSDSADVSPFSS Trigger: TGATGAAAAAGGAGAGACGTCTGCGGAGTCCGAGCATGACGCCCACCCAGCAAAAGACCGAACTCTCAGCACAGCCTCGCACTCTTCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS-3UTR CAA 90 bp | GCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTTGCGCATGCTCCTCCTaGTCGACAAAGACACCATTG | + |
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Preference number: 5 (lower is better) Translates to: ALWKIPHRKTLNLVPPLACACSS*STKTPL Trigger: CAATGGTGTCTTTGTCGACAAGGAGGAGCATGCGCA...AGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CAA 90 bp | GCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTCACACCCTTTTTACCTaGGATAGTTTTCAGAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALWKIPHRKTLNLVPPLAHTLFT*DSFQRE Trigger: TTCTCTCTGAAAACTATCCAAGGTAAAAAGGGTGTG...AGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS-3UTR CAA 90 bp | CCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCCTGGCTGTCTCCCTCTaGAATTGTGTCTTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PLLLRPQCVFCMFWASGSLAVSL*NCVFCS Trigger: TGAACAGAAGACACAATTCAAGAGGGAGACAGCCAG...GCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058865.14 ENSMUST00000107070.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACACTGGCTGTCTCCCTCTaGAATTGTGTCTTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: KEEVSSTEVKSCTLEDTTLAVSL*NCVFCS Trigger: TGAACAGAAGACACAATTCAAGAGGGAGACAGCCAG...TGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCTCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 |
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| CDS TCA 72 bp | CTTGGGCTTGTGACCCTCCGCGTCCTCTGTGGGCTCTaGGCCTGTGGCCTCCAGAGGAGCAGGGATCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGLVTLRVLCGL*ACGLQRSRDRS Trigger: GCTCCGATCCCTGCTCCTCTGGAGGCCACAGGCTCAGAGCCCACAGAGGACGCGGAGGGTCACAAGCCCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS TCA 72 bp | TCGTCCTCTTTAAGCAGCCTGCAGAGCTTGGGCTTGTaGCCCTCCGCGTCCTCTGTGGGCTCTGAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSLSSLQSLGL*PSASSVGSEPV Trigger: CACAGGCTCAGAGCCCACAGAGGACGCGGAGGGTCACAAGCCCAAGCTCTGCAGGCTGCTTAAAGAGGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS CCA 72 bp | TGCGAGGCTGTGCTGAGAGTTCGGTCTTTTGCTGGGTaGGCGTCATGCTCGGACTCCGCAGACGTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CEAVLRVRSFAG*ASCSDSADVSP Trigger: AGGAGAGACGTCTGCGGAGTCCGAGCATGACGCCCACCCAGCAAAAGACCGAACTCTCAGCACAGCCTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS CAA 72 bp | ACCTGCGCATGCTCCTCCTTGTCGACAAAGACACCATaGATCCTGAGCACCCTGTCACCGTCCAGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TCACSSLSTKTP*ILSTLSPSRSP Trigger: GGGGCTCCTGGACGGTGACAGGGTGCTCAGGATCAATGGTGTCTTTGTCGACAAGGAGGAGCATGCGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000135031.8 ENSMUST00000138014.8 ENSMUST00000153256.3 |
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| CDS TCA 72 bp | CAGCCTTGTCAGCAGGGCCACCCTGCTGTACCTCTTTaGCAAAGGAGCCAGGCTGACCCCGAATGGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: QPCQQGHPAVPL*QRSQADPEWHS Trigger: TGAATGCCATTCGGGGTCAGCCTGGCTCCTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGACAAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS CAA 90 bp | TCCCCGTTCACTTCGATGATGACGTCCTCATTCTCCAGCCCAGCCTaGTCAGCAGGGCCACCCTGCTGTACCTCTTTGACAAAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SPFTSMMTSSFSSPA*SAGPPCCTSLTKEP Trigger: TGGCTCCTTTGTCAAAGAGGTACAGCAGGGTGGCCCTGCTGACAAGGCTGGGCTGGAGAATGAGGACGTCATCATCGAAGTGAACGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000153256.3 |
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| CDS CAA 90 bp | AGTGTCCTTCTCAATTCGGAGAAAGAAGCCATAGTTCTGCCCCTCTaGTTTGGACAATTTACACTCTCTGGGGTTGAAGGTGGAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SVLLNSEKEAIVLPL*FGQFTLSGVEGGGH Trigger: ATGGCCTCCACCTTCAACCCCAGAGAGTGTAAATTGTCCAAACAAGAGGGGCAGAACTATGGCTTCTTTCTCCGAATTGAGAAGGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000128789.2 ENSMUST00000135031.8 ENSMUST00000138014.8 ENSMUST00000153256.3 |
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| CDS CAA 72 bp | CTCAATTCGGAGAAAGAAGCCATAGTTCTGCCCCTCTaGTTTGGACAATTTACACTCTCTGGGGTTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LNSEKEAIVLPL*FGQFTLSGVEG Trigger: ACCTTCAACCCCAGAGAGTGTAAATTGTCCAAACAAGAGGGGCAGAACTATGGCTTCTTTCTCCGAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000058865.14 ENSMUST00000107069.8 ENSMUST00000107070.8 ENSMUST00000128789.2 ENSMUST00000135031.8 ENSMUST00000138014.8 ENSMUST00000153256.3 |
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