Pregenerated sensors for PDZD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032105Ensembl transcript IDs: ENSMUST00000034618.6
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGAGAAAGGAGAAGGTCCCTGGCAGTCCTGTGATTGGTGGTTTCTaGATCCTCCAGCTCCCAATTCCAACTTCAAGAGATTGTTCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: MRKEKVPGSPVIGGF*ILQLPIPTSRDCSQ Trigger: CTGGGAACAATCTCTTGAAGTTGGAATTGGGAGCTGGAGGATTCAGAAACCACCAATCACAGGACTGCCAGGGACCTTCTCCTTTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR GCA 90 bp | AAGGTATCCACAGTAGAAGGAAGATACACCTCCAATCAATCCTTCTaGCAGATGACAACAGAGCCACATCTAACCTATGTTCTCCATGGC | + |
|
Preference number: 1 (lower is better) Translates to: KVSTVEGRYTSNQSF*QMTTEPHLTYVLHG Trigger: GCCATGGAGAACATAGGTTAGATGTGGCTCTGTTGTCATCTGGCAGAAGGATTGATTGGAGGTGTATCTTCCTTCTACTGTGGATACCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR GCA 90 bp | ATACATTTACTTATTTATTTGGACAGTAGCGTATGTATACTAAAGTaGTCACAAAGAGGTCAGAGGGCAAATTCCAGGAGCTGGTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: IHLLIYLDSSVCILK*SQRGQRANSRSWFS Trigger: AGAGAACCAGCTCCTGGAATTTGCCCTCTGACCTCTTTGTGAGCACTTTAGTATACATACGCTACTGTCCAAATAAATAAGTAAATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCGGTGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCACCCTCCACCTCAGGGTaGAGAGCGAGGGCAGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSVAPQRHLLEQNCIFGAPSTSG*RARAGE Trigger: TTCTCCTGCCCTCGCTCTGCACCCTGAGGTGGAGGG...TGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCACAGCTCCGTCTCAGGCTCCCTGTaGAGCCCGCCTTCGGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: WLHSVIFLSRTASLAHSSVSGSL*SPPSVS Trigger: AGAGACCGAAGGCGGGCTCCACAGGGAGCCTGAGAC...GGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTCTTCTACCGTGTGGTTCTGGTGAGTCAACTCCGGTTGCCAGGCTTAGACAGTCCTGTGATTGGTaGTTTCTGAATCCTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLLPCGSGESTPVARLRQSCDW*FLNPPA Trigger: AGCTGGAGGATTCAGAAACCACCAATCACAGGACTG...TCTAAGCCTGGCAACCGGAGTTGACTCACCAGAACCACACGGTAGAAGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR CCA 72 bp | CCACATATAGCATCCTGTGGCGTCTCAGGCTCCCTGTaGAGCCCGCCTTCGGTCTCTGTCCACACCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHIASCGVSGSL*SPPSVSVHTPL Trigger: CAGAGGGGTGTGGACAGAGACCGAAGGCGGGCTCCACAGGGAGCCTGAGACGCCACAGGATGCTATATGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR CCA 72 bp | GCACAGCTCCCCAAAATGTCCACATATAGCATCCTGTaGCGTCTCAGGCTCCCTGTGGAGCCCGCCTTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: AQLPKMSTYSIL*RLRLPVEPAFG Trigger: ACCGAAGGCGGGCTCCACAGGGAGCCTGAGACGCCACAGGATGCTATATGTGGACATTTTGGGGAGCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR GCA 72 bp | TCGGTGGCTCCACAGCGTCATCTTCTTGAGCAGAACTaGATCTTTGGCGCACAGCTCCCCAAAATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SVAPQRHLLEQN*IFGAQLPKMST Trigger: TGTGGACATTTTGGGGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR CCA 72 bp | CATCTAACCTATGTTCTCCATGGCTTCAATCCTCGGTaGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLTYVLHGFNPR*LHSVIFLSRTA Trigger: TGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGAGGATTGAAGCCATGGAGAACATAGGTTAGATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR GCA 72 bp | ACAGTAGAAGGAAGATACACCTCCAATCAATCCTTCTaGCAGATGACAACAGAGCCACATCTAACCTATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TVEGRYTSNQSF*QMTTEPHLTYV Trigger: AACATAGGTTAGATGTGGCTCTGTTGTCATCTGGCAGAAGGATTGATTGGAGGTGTATCTTCCTTCTACTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR GCA 72 bp | CTTATTTATTTGGACAGTAGCGTATGTATACTAAAGTaGTCACAAAGAGGTCAGAGGGCAAATTCCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LIYLDSSVCILK*SQRGQRANSRS Trigger: GCTCCTGGAATTTGCCCTCTGACCTCTTTGTGAGCACTTTAGTATACATACGCTACTGTCCAAATAAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR TCA 90 bp | GCGTCTCAGGCTCCCTGTGGAGCCCGCCTTCGGTCTCTGTCCACACCCCTCTGCGCCTCAGTCAGTTGCTaGAGCCTGTCCAGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASQAPCGARLRSLSTPLCASVSC*SLSSSL Trigger: CAGTGAACTGGACAGGCTTCAGCAACTGACTGAGGC...GCAGAGGGGTGTGGACAGAGACCGAAGGCGGGCTCCACAGGGAGCCTGAGACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGTGCAGAGCGAGGGCAGGAGAACTACTAGGCAAGTCTATGCTGGTAAGCCTTCCCGGAGACCCTaGCGCTGGGCTGAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQSEGRRTTRQVYAGKPSRRP*RWAEVP Trigger: GGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGG...CTTACCAGCATAGACTTGCCTAGTAGTTCTCCTGCCCTCGCTCTGCACCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | GCGTCTCAGGCTCCCTGTGGAGCCCGCCTTCGGTCTCTGTCCACACCCCTCTGCAAGATCCTTGGTCTCTaGCAGAGGAGGAGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQAPCGARLRSLSTPLCKILGL*QRRSSN Trigger: ATTGCTGCTCCTCCTCTGGCAGAGACCAAGGATCTT...GCAGAGGGGTGTGGACAGAGACCGAAGGCGGGCTCCACAGGGAGCCTGAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCAGCTCCCTCCACCTCAGGGTGCAGAGCGAGGGCAGGAGAACTACTAACGTCCCACAAGAACTaGCCAAGTCGGCCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPAPSTSGCRARAGELLTSHKN*PSRPSR Trigger: CCTGGATGGCCGACTTGGGCAGTTCTTGTGGGACGT...TAGTAGTTCTCCTGCCCTCGCTCTGCACCCTGAGGTGGAGGGAGCTGGGAACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR TCA 90 bp | TTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACCAGGACATTACCCTGCCCGGGCAGCTaGGCCTCCTGGGGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFKLSHQPAGKGCTRTLPCPGS*ASWGHL Trigger: CAGGTGACCCCAGGAGGCTCAGCTGCCCGGGCAGGG...TAATGTCCTGGTACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGTGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCACTCTACCTCCAGCCCTaGCACCAGCAGAGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVAPQRHLLEQNCIFGALYLQP*HQQSHL Trigger: CAGGTGACTCTGCTGGTGGCAGGGCTGGAGGTAGAG...TGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | GGTCCCTGGCAGTCCTGTGATTGGTGGTTTCTGAATCCTCCAGCTCCCAATTCCTTAGACATCGGGGCTTaGCGGGCAATGCCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPWQSCDWWFLNPPAPNSLDIGA*RAMPSP Trigger: AGGGCTGGGCATTGCCCGCCAAGCCCCGATGTCTAA...GGAATTGGGAGCTGGAGGATTCAGAAACCACCAATCACAGGACTGCCAGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR TCA 90 bp | GGTCCCTGGCAGTCCTGTGATTGGTGGTTTCTGAATCCTCCAGCTCCCAATTCCCAGCTCCTCCTGCACTaGGCACCAACCAGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPWQSCDWWFLNPPAPNSQLLLH*APTRKD Trigger: GTCCTTTCTGGTTGGTGCTCAGTGCAGGAGGAGCTG...GGAATTGGGAGCTGGAGGATTCAGAAACCACCAATCACAGGACTGCCAGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCAGCTCCCTCCACCTCAGGGTGCAGAGCGAGGGCAGGAGAACTACTAACACGCGCCACATCATaGACGTGTTGTGCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFPAPSTSGCRARAGELLTRATS*TCCAKT Trigger: AGTCTTGGCACAACACGTGCATGATGTGGCGCGTGT...TAGTAGTTCTCCTGCCCTCGCTCTGCACCCTGAGGTGGAGGGAGCTGGGAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTGTCCACACCCCTCTGCTGGAGGTAGGCTCATGAGAAAGGAGAAGGTCAAAGCGTCACTCCCCTaGAGAACACGCGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCPHPSAGGRLMRKEKVKASLP*RTRATS Trigger: TGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTT...GACCTTCTCCTTTCTCATGAGCCTACCTCCAGCAGAGGGGTGTGGACAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | TTCTTGAGCAGAACTGCATCTTTGGCGCACAGCTCCCCAAAATGTCCACATATAGGGCTTGGCGGGCAATaGCCAGCCCTCTGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSRTASLAHSSPKCPHIGLGGQ*PALCQG Trigger: CCCCTGGCAGAGGGCTGGGCATTGCCCGCCAAGCCC...TATATGTGGACATTTTGGGGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR CAA 72 bp | GGCTTCAATCCTCGGTGGCTCCACAGCGTCATCTTCTaGAGCAGAACTGCATCTTTGGCGCACAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFNPRWLHSVIF*SRTASLAHSSP Trigger: TGGGGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGAGGATTGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCGGTGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCAGGGTACAAGAAGCATTaGCAGGAGCCAGCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVAPQRHLLEQNCIFGAGYKKH*QEPARP Trigger: TGGCCTTGCTGGCTCCTGCCAATGCTTCTTGTACCC...TGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCACCGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCACAGCTCCTTCCAGGGATCAGATTaGTCCTGGTCTTCAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLHSVIFLSRTASLAHSSFQGSD*SWSSAR Trigger: CCTCGCTGAAGACCAGGACCAATCTGATCCCTGGAA...GGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | CCGTGTGGTTCTGGTGAGTCAACTCCGGTTGCCAGGCTTAGAAGCCAGCACCTTGCCTTGCCTAGATGCTaGTGCAAATGGAACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PCGSGESTPVARLRSQHLALPRC*CKWNPK Trigger: TTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGC...AAGGTGCTGGCTTCTAAGCCTGGCAACCGGAGTTGACTCACCAGAACCACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR TCA 90 bp | CCTTTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACCAGGACAACCAGCAGAGTCACCTaGTCTCCACTCTGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPFKLSHQPAGKGCTRTTSRVT*SPLCQS Trigger: GCTTTGGCAGAGTGGAGATCAGGTGACTCTGCTGGT...TGTCCTGGTACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACCAGGACACAAAAGCGAGGCCGGTaGAGGTTCCAGGGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLPFKLSHQPAGKGCTRTQKRGR*RFQGSD Trigger: ATCTGATCCCTGGAACCTGCACCGGCCTCGCTTTTG...TGTCCTGGTACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCACCTTTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACTCAGCAGCTCCTCCTaGACTGAGCACCAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQHLYLLSYLTSQLGKAVLSSSS*TEHQPE Trigger: TTCTGGTTGGTGCTCAGTGCAGGAGGAGCTGCTGAG...TACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAAAGGTGCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | CACCTCCAATCAATCCTTCTGCCAGATGACAACAGAGCCACATCTAACCTATGTACTGTATCTCCCACTTaGAGCCCTGCCCGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQSILLPDDNRATSNLCTVSPT*SPARAA Trigger: AGCTGCCCGGGCAGGGCTGCAAGTGGGAGATACAGT...ACATAGGTTAGATGTGGCTCTGTTGTCATCTGGCAGAAGGATTGATTGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | TACCGTGTGGTTCTGGTGAGTCAACTCCGGTTGCCAGGCTTAGAAGCCAGCACCAGATGCTGCTGCAAATaGAACCCAAAAGTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVLVSQLRLPGLEASTRCCCK*NPKVFS Trigger: GGAAAAGACTTTTGGGTTCCATTTGCAGCAGCATCT...GGTGCTGGCTTCTAAGCCTGGCAACCGGAGTTGACTCACCAGAACCACACGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGAGCAGAACTGCATCTTTGGCGCACAGCTCCCCAAAATGTCCACATATCAGGATCGACGACAATaGGAGAGACACAAGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEQNCIFGAQLPKMSTYQDRRQ*ERHKSP Trigger: AGGGCTCTTGTGTCTCTCTCATTGTCGTCGATCCTG...ATATGTGGACATTTTGGGGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | CATGAGAAAGGAGAAGGTCCCTGGCAGTCCTGTGATTGGTGGTTTCTGAATCCTTCAGCCTTGCCTAGATaGTGCTGCAAATGGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HEKGEGPWQSCDWWFLNPSALPR*CCKWNP Trigger: TGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGA...AGGATTCAGAAACCACCAATCACAGGACTGCCAGGGACCTTCTCCTTTCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | ATCCACAGTAGAAGGAAGATACACCTCCAATCAATCCTTCTGCCAGATGACAACCTTCAGGCAGAGGGGTaGCTCAGCCTCAGTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHSRRKIHLQSILLPDDNLQAEG*LSLSQL Trigger: CAACTGACTGAGGCTGAGCCACCCCTCTGCCTGAAG...GTTGTCATCTGGCAGAAGGATTGATTGGAGGTGTATCTTCCTTCTACTGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| 3UTR CAA 72 bp | CTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTaGGCGCACAGCTCCCCAAAATGTCCACATATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSVIFLSRTAS*AHSSPKCPHIA Trigger: TGCTATATGTGGACATTTTGGGGAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGAATCCTCCAGCTCCCAATTCCAACTTCAAGAGATTGTTCCCAGCTCCATCATGCACGTGTTGTaGCAAGACTGTCAGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VSESSSSQFQLQEIVPSSIMHVL*QDCQQY Trigger: GTATTGCTGACAGTCTTGGCACAACACGTGCATGAT...GGAGCTGGGAACAATCTCTTGAAGTTGGAATTGGGAGCTGGAGGATTCAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CCA 90 bp | TTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACCAGGACATTAGTCAATGCCCAGCCTTaGATTAAACTTAAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFKLSHQPAGKGCTRTLVNAQP*IKLKLQ Trigger: CTGAAGTTTAAGTTTAATCCAAGGCTGGGCATTGAC...TAATGTCCTGGTACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | TTGTTCACCGCTAGGATCCGATCTCCTTCCCGGAGACCCTGGCGCTaGGCTGAGGTGCCCGGATCGACCCTGCACACCACATGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFTARIRSPSRRPWR*AEVPGSTLHTTWSA Trigger: GGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATCCTAGCGGTGAACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | CTAGGATCCGATCTCCTTCCCGGAGACCCTGGCGCTGGGCTGAGGTaGCCGGATCGACCCTGCACACCACATGGTCAGCCTTGCCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGSDLLPGDPGAGLR*PDRPCTPHGQPCLD Trigger: ATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATCCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | GAGACACAAGAGCCCTGTGCCCGGATTCTAGACACTGTTTCCTCATaGCCCAGCCCATCCACGCTTTCCCCGGCCACAGCCACCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETQEPCARILDTVSS*PSPSTLSPATATRR Trigger: CCGCCTGGTGGCTGTGGCCGGGGAAAGCGTGGATGGGCTGGGCCATGAGGAAACAGTGTCTAGAATCCGGGCACAGGGCTCTTGTGTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS TCA 90 bp | GCCCAGCCCTCTGCCAGGGGTGCAGCAAGAGGCATTCCTAGTTGGTaGCACTGTTCCTCTACCTCCAGCCCTGCCACCAGCAGAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AQPSARGAARGIPSW*HCSSTSSPATSRVT Trigger: GGTGACTCTGCTGGTGGCAGGGCTGGAGGTAGAGGAACAGTGTCACCAACTAGGAATGCCTCTTGCTGCACCCCTGGCAGAGGGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | CCAGCCTTGTCAGCTGGTAGTCCTGGATCCACGTCCCACAAGAACTaGCCAAGTCGGCCATCCAGGCCCTTCTCCTCCCGGAGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PALSAGSPGSTSHKN*PSRPSRPFSSRSRN Trigger: GTTCCTGCTCCGGGAGGAGAAGGGCCTGGATGGCCGACTTGGGCAGTTCTTGTGGGACGTGGATCCAGGACTACCAGCTGACAAGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | CATGCACGTGTTGTGCCAAGACTGTCAGCAATACCCGGGGACCGCTaGCCCGGATGTAGCGCACTACCACCGCGTGGTCCTCATGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HARVVPRLSAIPGDR*PGCSALPPRGPHVP Trigger: TGGCACATGAGGACCACGCGGTGGTAGTGCGCTACATCCGGGCCAGCGGTCCCCGGGTATTGCTGACAGTCTTGGCACAACACGTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | CCCTGGCGCTGGGCTGAGGTGCCCGGATCGACCCTGCACACCACATaGTCAGCCTTGCCTAGATGCTGCTGCAAATGGAACCCAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PWRWAEVPGSTLHTT*SALPRCCCKWNPKV Trigger: GACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | GGACAGAGGAAAGCGTCACTCCCCTGCAGAACACGCGCCACATCATaGACGTGTTGTGCCAAGACTGTCAGCAATACCCGGGGACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQRKASLPCRTRATS*TCCAKTVSNTRGPL Trigger: CAGCGGTCCCCGGGTATTGCTGACAGTCTTGGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTTCCTCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | CTGACCCCCGAGGGTAGGGTAGGACAGAGGAAAGCGTCACTCCCCTaGAGAACACGCGCCACATCATGCACGTGTTGTGCCAAGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTPEGRVGQRKASLP*RTRATSCTCCAKTV Trigger: GACAGTCTTGGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTTCCTCTGTCCTACCCTACCCTCGGGGGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | ATATTATTGTTCACCGCTAGGATCCGATCTCCTTCCCGGAGACCCTaGCGCTGGGCTGAGGTGCCCGGATCGACCCTGCACACCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLFTARIRSPSRRP*RWAEVPGSTLHTTW Trigger: CCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATCCTAGCGGTGAACAATAATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | GTCCAGTCCTCTCCAGACTCCAAGGAAATCCAGGCTTCTAAGCCCTaGGGATTCCTAGCTCCTAGCTTCAGGCAGAGGGGTGGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQSSPDSKEIQASKP*GFLAPSFRQRGGSA Trigger: GGCTGAGCCACCCCTCTGCCTGAAGCTAGGAGCTAGGAATCCGCAGGGCTTAGAAGCCTGGATTTCCTTGGAGTCTGGAGAGGACTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 90 bp | ACCCAAAGCCTTCAGGTCCTTTCTCTATGTTTAGACATCGGGGCTTaGCGGGCAATGCCCAGCCCTCTGCCAGGGGTGCAGCAAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQSLQVLSLCLDIGA*RAMPSPLPGVQQEA Trigger: TGCCTCTTGCTGCACCCCTGGCAGAGGGCTGGGCATTGCCCGCCAAGCCCCGATGTCTAAACATAGAGAAAGGACCTGAAGGCTTTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCTCCACAGCGTCATCTTCTTGAGCAGAACTGCATCTTTGGCGCACAGCTCCGGGTACAAGAAGCATaGGCAGGAGCCAGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAPQRHLLEQNCIFGAQLRVQEA*AGASKA Trigger: GGCCTTGCTGGCTCCTGCCAATGCTTCTTGTACCCG...GAGCTGTGCGCCAAAGATGCAGTTCTGCTCAAGAAGATGACGCTGTGGAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | GGGCTGAGGTGCCCGGATCGACCCTGCACACCACATGGTCAGCCTTaGCTAGATGCTGCTGCAAATGGAACCCAAAAGTCTTTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLRCPDRPCTPHGQP*LDAAANGTQKSFPP Trigger: AGGAGGAAAAGACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | GTCAGCCTCAGGATCGACGACAATGAGAGAGACACAAGAGCCCTGTaGCCGGATTCTAGACACTGTTTCCTCATGGCCCAGCCCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLRIDDNERDTRAL*PDSRHCFLMAQPIH Trigger: GTGGATGGGCTGGGCCATGAGGAAACAGTGTCTAGAATCCGGGCACAGGGCTCTTGTGTCTCTCTCATTGTCGTCGATCCTGAGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | AAAGTCTTTTCCTCCTCCTTGCTCAACAGACAAAAGCGAGGCCGGTaGAGGTTCCAGGGATCAGATTGGTCCTGGTCTTCAGCGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVFSSSLLNRQKRGR*RFQGSDWSWSSARE Trigger: CTCCCTCGCTGAAGACCAGGACCAATCTGATCCCTGGAACCTGCACCGGCCTCGCTTTTGTCTGTTGAGCAAGGAGGAGGAAAAGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 90 bp | GCCAGAAGGCTCAACTGTGTCTTCAACCGGAAGATCCTTGGTCTCTaGCAGAGGAGGAGCAGCAATCTCAGTGTTCTCCAAGAAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARRLNCVFNRKILGL*QRRSSNLSVLQEEE Trigger: CTCCTCTTCTTGGAGAACACTGAGATTGCTGCTCCTCCTCTGGCAGAGACCAAGGATCTTCCGGTTGAAGACACAGTTGAGCCTTCTGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGAATCCTCCAGCTCCCAATTCCAACTTCAAGAGATTGTTCCCAGCTCCGCCTTCATCCCAGCCTaGTCAGCTGGTAGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSESSSSQFQLQEIVPSSAFIPA*SAGSPG Trigger: TCCAGGACTACCAGCTGACAAGGCTGGGATGAAGGC...GGAGCTGGGAACAATCTCTTGAAGTTGGAATTGGGAGCTGGAGGATTCAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CAA 90 bp | CATGAGAAAGGAGAAGGTCCCTGGCAGTCCTGTGATTGGTGGTTTCTGAATCCTCTCAGCCTCAGTCAGTaGCTGAAGCCTGTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HEKGEGPWQSCDWWFLNPLSLSQ*LKPVQF Trigger: GAACTGGACAGGCTTCAGCAACTGACTGAGGCTGAG...AGGATTCAGAAACCACCAATCACAGGACTGCCAGGGACCTTCTCCTTTCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CAA 90 bp | TTACCTTTTAAGCTATCTCACCAGCCAGCTGGGAAAGGCTGTACCAGGACATTATCAACCGGAAGATCCTaGGTCTCTGCCAGAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPFKLSHQPAGKGCTRTLSTGRS*VSARGG Trigger: TCCTCCTCTGGCAGAGACCAAGGATCTTCCGGTTGA...TAATGTCCTGGTACAGCCTTTCCCAGCTGGCTGGTGAGATAGCTTAAAAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGCATCTTTGGCGCACAGCTCCCCAAAATGTCCACATATAGCATCCTGGTCTTTTCCTCCTCCTaGCTCAACAGACAAAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QNCIFGAQLPKMSTYSILVFSSS*LNRQKR Trigger: TCGCTTTTGTCTGTTGAGCAAGGAGGAGGAAAAGAC...CAGGATGCTATATGTGGACATTTTGGGGAGCTGTGCGCCAAAGATGCAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS TCA 72 bp | GATCCGATCTCCTTCCCGGAGACCCTGGCGCTGGGCTaGGGTGCCCGGATCGACCCTGCACACCACATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DPISFPETLALG*GARIDPAHHMV Trigger: GACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | GATCTCCTTCCCGGAGACCCTGGCGCTGGGCTGAGGTaGCCGGATCGACCCTGCACACCACATGGTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DLLPGDPGAGLR*PDRPCTPHGQP Trigger: AGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | GCTAGGATCCGATCTCCTTCCCGGAGACCCTGGCGCTaGGCTGAGGTGCCCGGATCGACCCTGCACACCACA | + |
|
Preference number: 6 (lower is better) Translates to: ARIRSPSRRPWR*AEVPGSTLHTT Trigger: TGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATCCTAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | TTCACCGCTAGGATCCGATCTCCTTCCCGGAGACCCTaGCGCTGGGCTGAGGTGCCCGGATCGACCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FTARIRSPSRRP*RWAEVPGSTLH Trigger: GTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTCTCCGGGAAGGAGATCGGATCCTAGCGGTGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | GACCCTGGCGCTGGGCTGAGGTGCCCGGATCGACCCTaGACACCACATGGTCAGCCTTGCCTAGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPGAGLRCPDRP*TPHGQPCLDAA Trigger: AGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCAGCGCCAGGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | GTTGTGCCAAGACTGTCAGCAATACCCGGGGACCGCTaGCCCGGATGTAGCGCACTACCACCGCGTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVPRLSAIPGDR*PGCSALPPRGP Trigger: AGGACCACGCGGTGGTAGTGCGCTACATCCGGGCCAGCGGTCCCCGGGTATTGCTGACAGTCTTGGCACAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | TCAGCTGGTAGTCCTGGATCCACGTCCCACAAGAACTaGCCAAGTCGGCCATCCAGGCCCTTCTCCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGSPGSTSHKN*PSRPSRPFSSR Trigger: CCGGGAGGAGAAGGGCCTGGATGGCCGACTTGGGCAGTTCTTGTGGGACGTGGATCCAGGACTACCAGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 90 bp | GAAAGCGTCACTCCCCTGCAGAACACGCGCCACATCATGCACGTGTaGTGCCAAGACTGTCAGCAATACCCGGGGACCGCTGGCCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ESVTPLQNTRHIMHV*CQDCQQYPGTAGPD Trigger: ATCCGGGCCAGCGGTCCCCGGGTATTGCTGACAGTCTTGGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | GGATATCCGTTCACCTCCAAAACTGTATCTCCCACTTaGAGCCCTGCCCGGGCAGCTGAGCCTCCTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GYPFTSKTVSPT*SPARAAEPPGV Trigger: GACCCCAGGAGGCTCAGCTGCCCGGGCAGGGCTGCAAGTGGGAGATACAGTTTTGGAGGTGAACGGATATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | GAGGGTAGGGTAGGACAGAGGAAAGCGTCACTCCCCTaGAGAACACGCGCCACATCATGCACGTGTTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EGRVGQRKASLP*RTRATSCTCCA Trigger: GGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTTCCTCTGTCCTACCCTACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | TGGGCTGAGGTGCCCGGATCGACCCTGCACACCACATaGTCAGCCTTGCCTAGATGCTGCTGCAAATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: WAEVPGSTLHTT*SALPRCCCKWN Trigger: GTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | CTTCAGGTCCTTTCTCTATGTTTAGACATCGGGGCTTaGCGGGCAATGCCCAGCCCTCTGCCAGGGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQVLSLCLDIGA*RAMPSPLPGVQ Trigger: CTGCACCCCTGGCAGAGGGCTGGGCATTGCCCGCCAAGCCCCGATGTCTAAACATAGAGAAAGGACCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 72 bp | ACTCCCCTGCAGAACACGCGCCACATCATGCACGTGTaGTGCCAAGACTGTCAGCAATACCCGGGGACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPLQNTRHIMHV*CQDCQQYPGTA Trigger: AGCGGTCCCCGGGTATTGCTGACAGTCTTGGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 72 bp | CCTTCAGGTCCTTTCTCTATGTTTAGACATCGGGGCTaGGCGGGCAATGCCCAGCCCTCTGCCAGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSGPFSMFRHRG*AGNAQPSARGA Trigger: TGCACCCCTGGCAGAGGGCTGGGCATTGCCCGCCAAGCCCCGATGTCTAAACATAGAGAAAGGACCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 90 bp | AACCCAAAGCCTTCAGGTCCTTTCTCTATGTTTAGACATCGGGGCTaGGCGGGCAATGCCCAGCCCTCTGCCAGGGGTGCAGCAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NPKPSGPFSMFRHRG*AGNAQPSARGAARG Trigger: GCCTCTTGCTGCACCCCTGGCAGAGGGCTGGGCATTGCCCGCCAAGCCCCGATGTCTAAACATAGAGAAAGGACCTGAAGGCTTTGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | CGAGGCCGGTGCAGGTTCCAGGGATCAGATTGGTCCTaGTCTTCAGCGAGGGAGAGGACAGGATTGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RGRCRFQGSDWS*SSARERTGLSM Trigger: CATTGACAATCCTGTCCTCTCCCTCGCTGAAGACCAGGACCAATCTGATCCCTGGAACCTGCACCGGCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 90 bp | TGGGCTGAGGTGCCCGGATCGACCCTGCACACCACATGGTCAGCCTaGCCTAGATGCTGCTGCAAATGGAACCCAAAAGTCTTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAEVPGSTLHTTWSA*PRCCCKWNPKVFSS Trigger: GGAGGAAAAGACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCACCTCAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 90 bp | GAGTCTGAATCCATAGCCACCTCCAGGCCCCGGGTACAAGAAGCATaGGCAGGAGCCAGCAAGGCCAGAAGGCTCAACTGTGTCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ESESIATSRPRVQEA*AGASKARRLNCVFN Trigger: GTTGAAGACACAGTTGAGCCTTCTGGCCTTGCTGGCTCCTGCCAATGCTTCTTGTACCCGGGGCCTGGAGGTGGCTATGGATTCAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | AAAGCGTCACTCCCCTGCAGAACACGCGCCACATCATaGACGTGTTGTGCCAAGACTGTCAGCAATACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KASLPCRTRATS*TCCAKTVSNTR Trigger: CCGGGTATTGCTGACAGTCTTGGCACAACACGTGCATGATGTGGCGCGTGTTCTGCAGGGGAGTGACGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 72 bp | GTGCCCGGATCGACCCTGCACACCACATGGTCAGCCTaGCCTAGATGCTGCTGCAAATGGAACCCAAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPGSTLHTTWSA*PRCCCKWNPKV Trigger: GACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | TGCCCGGATCGACCCTGCACACCACATGGTCAGCCTTaGCTAGATGCTGCTGCAAATGGAACCCAAAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPDRPCTPHGQP*LDAAANGTQKS Trigger: AGACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGATCCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | TCTCCAGACTCCAAGGAAATCCAGGCTTCTAAGCCCTaGGGATTCCTAGCTCCTAGCTTCAGGCAGAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPDSKEIQASKP*GFLAPSFRQRG Trigger: ACCCCTCTGCCTGAAGCTAGGAGCTAGGAATCCGCAGGGCTTAGAAGCCTGGATTTCCTTGGAGTCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | GCACTGAGCACCAACCAGAAAGGACCTCGACTTCCGTaGGTGACGCTGAAGCCAAAGCCGCCTTCATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALSTNQKGPRLP*VTLKPKPPSSF Trigger: AAAAGATGAAGGCGGCTTTGGCTTCAGCGTCACCCACGGAAGTCGAGGTCCTTTCTGGTTGGTGCTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | AGGATCGACGACAATGAGAGAGACACAAGAGCCCTGTaGCCGGATTCTAGACACTGTTTCCTCATGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RIDDNERDTRAL*PDSRHCFLMAQ Trigger: CTGGGCCATGAGGAAACAGTGTCTAGAATCCGGGCACAGGGCTCTTGTGTCTCTCTCATTGTCGTCGATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 72 bp | CCAGAAGGCTCAACTGTGTCTTCAACCGGAAGATCCTaGGTCTCTGCCAGAGGAGGAGCAGCAATCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PEGSTVSSTGRS*VSARGGAAISV Trigger: CACTGAGATTGCTGCTCCTCCTCTGGCAGAGACCAAGGATCTTCCGGTTGAAGACACAGTTGAGCCTTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS GCA 72 bp | TCGACCCTGCACACCACATGGTCAGCCTTGCCTAGATaGTGCTGCAAATGGAACCCAAAAGTCTTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STLHTTWSALPR*CCKWNPKVFSS Trigger: GGAGGAAAAGACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGTGTGCAGGGTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CCA 72 bp | ACCACATGGTCAGCCTTGCCTAGATGCTGCTGCAAATaGAACCCAAAAGTCTTTTCCTCCTCCTTGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TTWSALPRCCCK*NPKVFSSSLLN Trigger: GTTGAGCAAGGAGGAGGAAAAGACTTTTGGGTTCCATTTGCAGCAGCATCTAGGCAAGGCTGACCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 72 bp | GATTGGTCCTGGTCTTCAGCGAGGGAGAGGACAGGATaGTCAATGCCCAGCCTTGGATTAAACTTAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: DWSWSSARERTG*SMPSLGLNLNF Trigger: GAAGTTTAAGTTTAATCCAAGGCTGGGCATTGACAATCCTGTCCTCTCCCTCGCTGAAGACCAGGACCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||
| CDS CAA 90 bp | CAGGGATCAGATTGGTCCTGGTCTTCAGCGAGGGAGAGGACAGGATaGTCAATGCCCAGCCTTGGATTAAACTTAAACTTCAGAGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: QGSDWSWSSARERTG*SMPSLGLNLNFRVN Trigger: GTTAACTCTGAAGTTTAAGTTTAATCCAAGGCTGGGCATTGACAATCCTGTCCTCTCCCTCGCTGAAGACCAGGACCAATCTGATCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034618.6 |
||