Pregenerated sensors for PDXK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032788Ensembl transcript IDs: ENSMUST00000041616.15
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCTCAGAGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTaGCTGCATGGGGCACTGCCTAGCCCTGCAAGGCAGGCCATGAGG | + |
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Preference number: 1 (lower is better) Translates to: AAQRLPEPPVQVTYT*LHGALPSPARQAMR Trigger: CCTCATGGCCTGCCTTGCAGGGCTAGGCAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCTCTGAGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | GGGCTGTGTGAGTGCCCACAAGAGCCCAGTGAGAGCCGGGCATGGTaGTCCACGCCTTTAATACCAGCACTCGGGAGGCAGAGGCAGGCG | + |
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Preference number: 1 (lower is better) Translates to: GLCECPQEPSESRAW*STPLIPALGRQRQA Trigger: CGCCTGCCTCTGCCTCCCGAGTGCTGGTATTAAAGGCGTGGACCACCATGCCCGGCTCTCACTGGGCTCTTGTGGGCACTCACACAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CCTGTGCAGCAATGCACTGTCCCCAGCAGCATGTGGCAGGTGAACTaGCACCTGACAGTCCTGCAGGGGCTGTGTGAGTGCCCACAAGAG | + |
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Preference number: 1 (lower is better) Translates to: PVQQCTVPSSMWQVN*HLTVLQGLCECPQE Trigger: CTCTTGTGGGCACTCACACAGCCCCTGCAGGACTGTCAGGTGGCAGTTCACCTGCCACATGCTGCTGGGGACAGTGCATTGCTGCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | ACCTCTGTCTCTCCTTCCCTGTCTGTCCAACCCCCTGTGCAGCAATaGACTGTCCCCAGCAGCATGTGGCAGGTGAACTGCCACCTGACA | + |
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Preference number: 1 (lower is better) Translates to: TSVSPSLSVQPPVQQ*TVPSSMWQVNCHLT Trigger: TGTCAGGTGGCAGTTCACCTGCCACATGCTGCTGGGGACAGTGCATTGCTGCACAGGGGGTTGGACAGACAGGGAAGGAGAGACAGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CCCAGCTGGGGTCTAAGAGCTGCCCCTGCATACACAATGCCAATGTaGTCTGTAGAGGAGAAGACCTTCCAAGGAGGCAGAGGCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PSWGLRAAPAYTMPM*SVEEKTFQGGRGPG Trigger: GCCAGGGCCTCTGCCTCCTTGGAAGGTCTTCTCCTCTACAGAGCACATTGGCATTGTGTATGCAGGGGCAGCTCTTAGACCCCAGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | CGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCCATCTaGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: RAGSGPCGPASISSI*GIIMGKGCRSQSSM Trigger: CATGGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | ACAATCAGGACTGTGTATACATACACAGGGGGCAATGGCAGCCAGTaGCCAACAGAAAGGTCCAGAGGCAGCAGGCTGGTCTCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: TIRTVYTYTGGNGSQ*PTERSRGSRLVSST Trigger: GGTGGAGGAGACCAGCCTGCTGCCTCTGGACCTTTCTGTTGGTCACTGGCTGCCATTGCCCCCTGTGTATGTATACACAGTCCTGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | GCAATGGCAGCCAGTGACCAACAGAAAGGTCCAGAGGCAGCAGGCTaGTCTCCTCCACCTACCTTCCACATACCTATGAGGCAACATGAG | + |
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Preference number: 1 (lower is better) Translates to: AMAASDQQKGPEAAG*SPPPTFHIPMRQHE Trigger: CTCATGTTGCCTCATAGGTATGTGGAAGGTAGGTGGAGGAGACCAGCCTGCTGCCTCTGGACCTTTCTGTTGGTCACTGGCTGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | CATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTGCGTGGATGTCTaGAAGAGAGGCACCCCAGATAGCAGCAATAAAAGGGAGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: HGFPGPLSAGSCVDV*KRGTPDSSNKREHW Trigger: CCAGTGCTCCCTTTTATTGCTGCTATCTGGGGTGCCTCTCTTCCAGACATCCACGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CTCAGCTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTaGAGATGTCCTGGAATGTTCCCGTTCCTTAAAAGGTCCCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LSSRVTGDPADTQTA*RCPGMFPFLKRSLS Trigger: TGACAGGGACCTTTTAAGGAACGGGAACATTCCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | TGGACAGACATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTGCGTaGATGTCTGGAAGAGAGGCACCCCAGATAGCAGCAATAAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: WTDMAFQDLSVQVAA*MSGREAPQIAAIKG Trigger: CCCTTTTATTGCTGCTATCTGGGGTGCCTCTCTTCCAGACATCCACGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCATGTCTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | CCAGAACTGCCCCTTGGAGGGACACCCATTCTTAGCATCCACTGGTaGCTTTTGTGGTCAGCATCCATCTGTCACATGGACAGACATGGC | + |
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Preference number: 1 (lower is better) Translates to: PELPLGGTPILSIHW*LLWSASICHMDRHG Trigger: GCCATGTCTGTCCATGTGACAGATGGATGCTGACCACAAAAGCCACCAGTGGATGCTAAGAATGGGTGTCCCTCCAAGGGGCAGTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | ATCTTAAGGACTGAGGAGCAGGGATATGGGTGCGGCTCGCAGCCATaGTTAGGGACCCTAAACTCTGGAAAGCAGAGCCAGGAAGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ILRTEEQGYGCGSQP*LGTLNSGKQSQEVH Trigger: GTGAACTTCCTGGCTCTGCTTTCCAGAGTTTAGGGTCCCTAATCATGGCTGCGAGCCGCACCCATATCCCTGCTCCTCAGTCCTTAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | CCCATCCTCCAATTGGTCCAGGTTCTCAACACACGGCTGAAGTTCTaGCAGGCTGTGTGTCAGGAATGGGCAGCTATGAAGCTAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PILQLVQVLNTRLKF*QAVCQEWAAMKLGA Trigger: TGCTCCTAGCTTCATAGCTGCCCATTCCTGACACACAGCCTGTCAGAACTTCAGCCGTGTGTTGAGAACCTGGACCAATTGGAGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CACATGGACAGACATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTaGGTGGATGTCTGGAAGAGAGGCACCCCAGATAGCAGCAATAAA | + |
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Preference number: 1 (lower is better) Translates to: HMDRHGFPGPLSAGS*VDVWKRGTPDSSNK Trigger: TTTATTGCTGCTATCTGGGGTGCCTCTCTTCCAGACATCCACGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCATGTCTGTCCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | TTAGCATCCACTGGTGGCTTTTGTGGTCAGCATCCATCTGTCACATaGACAGACATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTGCG | + |
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Preference number: 1 (lower is better) Translates to: LASTGGFCGQHPSVT*TDMAFQDLSVQVAA Trigger: CGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCATGTCTGTCCATGTGACAGATGGATGCTGACCACAAAAGCCACCAGTGGATGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | GTCTCCTTAGGCTGTGGCTTCTCAGAAGATAGATATCTTAAGGACTaGGGAGCAGGGATATGGGTGCGGCTCGCAGCCATGATTAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: VSLGCGFSEDRYLKD*GAGIWVRLAAMIRD Trigger: GTCCCTAATCATGGCTGCGAGCCGCACCCATATCCCTGCTCCTCAGTCCTTAAGATATCTATCTTCTGAGAAGCCACAGCCTAAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CTGCAGCTCTATTGTAACCTCACATTGAACCTGACCTCCCAGAACTaGCCCTTGGAGGGACACCCATTCTTAGCATCCACTGGTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LQLYCNLTLNLTSQN*PLEGHPFLASTGGF Trigger: AAAGCCACCAGTGGATGCTAAGAATGGGTGTCCCTCCAAGGGGCAGTTCTGGGAGGTCAGGTTCAATGTGAGGTTACAATAGAGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 90 bp | ACTGCAAGTGGAGGTAGAAACCTCTCTTCTCTGGTTCTGCAGGACTaGCACCATCTACAGCTGTCACAGAAAGTGTGGGAAAGCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: TASGGRNLSSLVLQD*HHLQLSQKVWESIR Trigger: CCTGATGCTTTCCCACACTTTCTGTGACAGCTGTAGATGGTGCCAGTCCTGCAGAACCAGAGAAGAGAGGTTTCTACCTCCACTTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | GCCACAAGCAGGGAGGTAATCCAAGGGAGATGGAGACGCCTGCTCTaGGGATATCCTCTGCCTGCTTCAATAGTGGGGAATCTTAAAATT | + |
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Preference number: 1 (lower is better) Translates to: ATSREVIQGRWRRLL*GYPLPASIVGNLKI Trigger: AATTTTAAGATTCCCCACTATTGAAGCAGGCAGAGGATATCCTCAGAGCAGGCGTCTCCATCTCCCTTGGATTACCTCCCTGCTTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | CCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTaGACAAAGACCAGAAACTGCCTGATGGTGAAACAGGGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PRHQGDLFHLECVSY*TKTRNCLMVKQGKE Trigger: TTCCTTCCCCTGTTTCACCATCAGGCAGTTTCTGGTCTTTGTGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR TCA 90 bp | TGTGGTGATTCCTTCCTAGTATTCAGGAGGTGGAAGGAGATACTTTaGGACAGAATCAATGTCCCCAATAGGAAGCGGCTAACCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: CGDSFLVFRRWKEIL*DRINVPNRKRLTLG Trigger: GCCCAGGGTTAGCCGCTTCCTATTGGGGACATTGATTCTGTCTCAAAGTATCTCCTTCCACCTCCTGAATACTAGGAAGGAATCACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCCAGTTCTCTaGTTCCTTCAAAGCTGTAAAAGGCTTATTAACGGACACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: ERERERERERESPVL*FLQSCKRLINGHLR Trigger: TCTGAGGTGTCCGTTAATAAGCCTTTTACAGCTTTGAAGGAAGCAGAGAACTGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGCCTGGCCCCTCAGCATaGGGTGGGCACAGAATCCAG | + |
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Preference number: 2 (lower is better) Translates to: RLPEPPVQVTYTCLHGALPGPSA*GGHRIQ Trigger: CTGGATTCTGTGCCCACCTCATGCTGAGGGGCCAGG...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGACCAGAGGCAGCAGGCTaGTCTCCTCCACCTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGPEAAG*SPPPTF Trigger: GAAGGTAGGTGGAGGAGACCAGCCTGCTGCCTCTGG...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAGGAAAGCATCAGGACTaGCACATGCATGTCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: LGRTSRVGPAPQVQPILQGKHQD*HMHVQP Trigger: CGGCTGGACATGCATGTGCCAGTCCTGATGCTTTCC...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGGCAAGAGTGGGTAGGTaGGTGGGTGGGCGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLPEPPVQVTYTCLHGALARVGR*VGGRCE Trigger: CTCACACCGCCCACCCACCCACCTACCCACTCTTGC...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGAAAACAGGGGAAGGAATaGGGAGATGCTGGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGKQGKE*GDAGPG Trigger: CCCTGGGCCAGCATCTCCTCATTCCTTCCCCTGTTT...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAAGCTTTTCACAGGGATaGAGACGGACACCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGRTSRVGPAPQVQPILQSFSQG*RRTPQL Trigger: CAGCTGAGGTGTCCGTCTCCATCCCTGTGAAAAGCT...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGAACCTCCATCCCAGGGTaGGTCTCTATCATTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGTSIPG*VSIIQG Trigger: CCCCTGAATGATAGAGACGCACCCTGGGATGGAGGT...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCCATCTGGGGCATCTCACATCAGGGCCCCTaGCCCCTCAGCATGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RAGSGPCGPASISSIWGISHQGP*PLSMRW Trigger: CCACCTCATGCTGAGGGGCCAGGGGCCCTGATGTGA...GATGCCCCAGATGGAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCCCTGCAGGGGCTGTGTaGGTGCCCACAAGAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSPAGAV*VPTRAQ Trigger: CTGGGCTCTTGTGGGCACTCACACAGCCCCTGCAGG...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAACAAAGACCAGAAACTaGCTGATGGTGAAACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LGRTSRVGPAPQVQPILQTKTRN*LMVKQG Trigger: CCCCTGTTTCACCATCAGGCAGTTTCTGGTCTTTGT...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGCTGGCTCTATAGGATaGGCAGTGAGGTATGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPAGSIG*AVRYGQ Trigger: TTGGCCATACCTCACTGCCCATCCTATAGAGCCAGC...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CAA 90 bp | CCAGCCGCACCTCCATCCCAGGGTGCGTCTCTATCATTCAGGGGGTaGGGGAGTGACATTCACTCAGACCTGGGAACCAGGTTCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PAAPPSQGASLSFRG*GSDIHSDLGTRFKP Trigger: AGGCTTGAACCTGGTTCCCAGGTCTGAGTGAATGTCACTCCCCAACCCCCTGAATGATAGAGACGCACCCTGGGATGGAGGTGCGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCCCTTCCACATACCTATaGGGCAACATGAGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPPSTYL*GNMRQS Trigger: TGACTGCCTCATGTTGCCTCATAGGTATGTGGAAGG...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTGCAGATGTCCTGGGCAGCTGCATTCGTCTaGCATTCTGGGACACCACCC | + |
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Preference number: 2 (lower is better) Translates to: LQSYRRPCRHPDGLQMSWAAAFV*HSGTPP Trigger: GGGTGGTGTCCCAGAATGTCAGACGAATGCAGCTGC...CCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCAGAATACGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCCCCACAAGAGCCCAGTaGGAGCCGGGCATGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: TPQNTGWFRSMWTSIYLLPTRAQ*EPGMVV Trigger: GACCACCATGCCCGGCTCTCACTGGGCTCTTGTGGG...GAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCGTATTCTGAGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGATTCCCAAGCTGCCCTaGACTCAGCTCCAGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RLPEPPVQVTYTCLHGALIPKLP*TQLQSY Trigger: GTAACTCTGGAGCTGAGTGCAGGGCAGCTTGGGAAT...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | TGCATGTCCAGCCGCACCTCCATCCCAGGGTGCGTCTCTATCATTCAGGGGGTTCTGTCCAACCCCCTGTaGAGCAATGCACTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: CMSSRTSIPGCVSIIQGVLSNPL*SNALSP Trigger: TGGGGACAGTGCATTGCTGCACAGGGGGTTGGACAG...AACCCCCTGAATGATAGAGACGCACCCTGGGATGGAGGTGCGGCTGGACATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGCTCAGTGCAGGTAGCTaGGTGGATGTCTGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RLPEPPVQVTYTCLHGALLSAGS*VDVWKR Trigger: TCTCTTCCAGACATCCACGCAGCTACCTGCACTGAG...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGATCAGAGGTGCCACATTaGCACCAGGTTTGGACACAT | + |
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Preference number: 2 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGSEVPH*HQVWTH Trigger: ATGTGTCCAAACCTGGTGCCAATGTGGCACCTCTGA...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCAACCCGCACTTCAGTCTaGCACCAGGGGGCAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GSHGIRETFSTWNVYPIATRTSV*HQGAGA Trigger: GGCTCCTGCCCCCTGGTGGCAGACTGAAGTGCGGGT...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCTCTAAGAGCTGCCCCTaGATACACAATGCCAATGTG | + |
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Preference number: 2 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPSKSCP*IHNANV Trigger: CACATTGGCATTGTGTATGCAGGGGCAGCTCTTAGA...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCCATCTGGGGCATCGCTCTCAGAGCTCCATaGAGACCCTATGCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RAGSGPCGPASISSIWGIALRAP*RPYASG Trigger: CCCAGAAGCATAGGGTCTCCATGGAGCTCTGAGAGC...GATGCCCCAGATGGAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCAACGCTAGAGACTGGCTaGGACCCGACTCTCGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GSHGIRETFSTWNVYPIATLETG*DPTLGK Trigger: CTTCCCGAGAGTCGGGTCTCAGCCAGTCTCTAGCGT...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCCCTGAATTCCCAAGCTaGCCTGCACTCAGCTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSPEFPS*PALSSR Trigger: TCTGGAGCTGAGTGCAGGGCAGCTTGGGAATTCAGG...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR TCA 90 bp | AACTCTGGAAAGCAGAGCCAGGAAGTTCACCCCCGAGCAGTAGACAATGGGACAGGCAATGGCAGCCAGTaGCCAACAGAAAGGTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NSGKQSQEVHPRAVDNGTGNGSQ*PTERSR Trigger: TCTGGACCTTTCTGTTGGTCACTGGCTGCCATTGCC...TGTCCCATTGTCTACTGCTCGGGGGTGAACTTCCTGGCTCTGCTTTCCAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCGACACCCAGACGGCTTaGAGATGTCCTGGAATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSDTQTA*RCPGMF Trigger: GAACATTCCAGGACATCTGCAAGCCGTCTGGGTGTC...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGAATGTGTATCCTATTaGACAAAGACCAGAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPECVSY*TKTRNC Trigger: GCAGTTTCTGGTCTTTGTGCAATAGGATACACATTC...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 90 bp | TCACCGCTTTCCCTACAGAGACTGCAGCTCTATTGTAACCTCACATaGAACCTGACCTCCCAGAACTGCCCCTTGGAGGGACACCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: SPLSLQRLQLYCNLT*NLTSQNCPLEGHPF Trigger: GAATGGGTGTCCCTCCAAGGGGCAGTTCTGGGAGGTCAGGTTCAATGTGAGGTTACAATAGAGCTGCAGTCTCTGTAGGGAAAGCGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | GCTAACCCTGGGCTAATGCAGCTTCCTTCCCAAGCACATTACTTCCTTACTAAACAGGGGCTGTGTGAGTaGCCACAAGAGCCCAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ANPGLMQLPSQAHYFLTKQGLCE*PQEPSE Trigger: CTCACTGGGCTCTTGTGGGCACTCACACAGCCCCTG...TTTAGTAAGGAAGTAATGTGCTTGGGAAGGAAGCTGCATTAGCCCAGGGTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCATCCATGGAGACCCTATaGTTCTGGGGAAGAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSHGIRETFSTWNVYPIASMETL*FWGRGR Trigger: CCTACCTCTTCCCCAGAAGCATAGGGTCTCCATGGA...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGACGTCTCATGGGACCTaGTGGCTCTATAGGATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRTSHGT*WLYRMG Trigger: GCCCATCCTATAGAGCCAGCAGGTCCCATGAGACGT...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 90 bp | CTCTATTGTAACCTCACATTGAACCTGACCTCCCAGAACTGCCCCTaGGAGGGACACCCATTCTTAGCATCCACTGGTGGCTTTTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LYCNLTLNLTSQNCP*EGHPFLASTGGFCG Trigger: ACCACAAAAGCCACCAGTGGATGCTAAGAATGGGTGTCCCTCCAAGGGGCAGTTCTGGGAGGTCAGGTTCAATGTGAGGTTACAATAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 90 bp | CCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATaGCACAAAGACCAGAAACTGCCTGATGGTGAAACAGGGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTASGRPFPPGMCIL*HKDQKLPDGETGEG Trigger: TCCTTCCCCTGTTTCACCATCAGGCAGTTTCTGGTCTTTGTGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR TCA 90 bp | GCTAACCCTGGGCTAATGCAGCTTCCTTCCCAAGCACATTACTTCCTTACTAAAACCTATGAGGCAACATaGGGCAGTCAGAGGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ANPGLMQLPSQAHYFLTKTYEAT*GSQRPR Trigger: CCTGGGCCTCTGACTGCCTCATGTTGCCTCATAGGT...TTTAGTAAGGAAGTAATGTGCTTGGGAAGGAAGCTGCATTAGCCCAGGGTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGATACACAGGGGGCAATaGCAGCCAGTGACCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRIHRGQ*QPVTNR Trigger: TCTGTTGGTCACTGGCTGCCATTGCCCCCTGTGTAT...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR GCA 90 bp | AACTCTGGAAAGCAGAGCCAGGAAGTTCACCCCCGAGCAGTAGACAATGGGACATACACAATGCCAATGTaGTCTGTAGAGGAGAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: NSGKQSQEVHPRAVDNGTYTMPM*SVEEKT Trigger: GGTCTTCTCCTCTACAGAGCACATTGGCATTGTGTA...TGTCCCATTGTCTACTGCTCGGGGGTGAACTTCCTGGCTCTGCTTTCCAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTGCAGATGTCCTGGGGCAAAGAAGATATTTaGCATAATTCTTCCAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: LQSYRRPCRHPDGLQMSWGKEDI*HNSSNA Trigger: GGCATTGGAAGAATTATGCCAAATATCTTCTTTGCC...CCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGCTGTCACAGAAAGTGTaGGAAAGCATCAGGACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRLSQKV*ESIRTG Trigger: GCCAGTCCTGATGCTTTCCCACACTTTCTGTGACAG...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGGCTGTGTGTCAGGAATaGGCAGCTATGAAGCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRAVCQE*AAMKLG Trigger: TCCTAGCTTCATAGCTGCCCATTCCTGACACACAGC...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR TCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCAAAGGGACCATGGTTGTaGATCACACATTTCTACGAC | + |
|
Preference number: 2 (lower is better) Translates to: GSHGIRETFSTWNVYPIAKGPWL*ITHFYD Trigger: GTCGTAGAAATGTGTGATTCACAACCATGGTCCCTT...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGAGCACTGGTCATATGTaGTGTGGTGATTCCTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRSTGHM*CGDSFL Trigger: TAGGAAGGAATCACCACACCACATATGACCAGTGCT...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CCA 90 bp | GTGGATACTGAAACTGCAAGTGGAGGTAGAAACCTCTCTTCTCTGGTTCTGCAGTATCATTCAGGGGGTTaGGGAGTGACATTCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VDTETASGGRNLSSLVLQYHSGG*GVTFTQ Trigger: CTGAGTGAATGTCACTCCCCAACCCCCTGAATGATA...CTGCAGAACCAGAGAAGAGAGGTTTCTACCTCCACTTGCAGTTTCAGTATCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | GTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTaGGCCCGGAGCACACCCCTCCTGCGCAGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VHRAWGLGQETT*ARSTPLLRSRD Trigger: GTCCCTGCTGCGCAGGAGGGGTGTGCTCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | GGCAGGAGACCACCTGAGCCCGGAGCACACCCCTCCTaGGCAGCAGGGACTGAGGGGCCAACTGTGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRRPPEPGAHPS*AAGTEGPTVLC Trigger: GCAAAGCACAGTTGGCCCCTCAGTCCCTGCTGCGCAGGAGGGGTGTGCTCCGGGCTCAGGTGGTCTCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAAGCCCATGTCCTCTATaGTGTTCTGTCACCGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGRTSRVGPAPQVQPILQSPCPL*CSVTAP Trigger: GGGGGCGGTGACAGAACACAATAGAGGACATGGGCT...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AACTGCCACCTGACAGTCCTGCAGGGGCTGTGTGAGTaGCCACAAGAGCCCAGTGAGAGCCGGGCATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NCHLTVLQGLCE*PQEPSESRAWW Trigger: CCACCATGCCCGGCTCTCACTGGGCTCTTGTGGGCACTCACACAGCCCCTGCAGGACTGTCAGGTGGCAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | TTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTaGATGGGGCACTGCCTAGCCCTGCAAGGCAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FQSPQSKSPTPA*MGHCLALQGRP Trigger: TGGCCTGCCTTGCAGGGCTAGGCAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTaGCTGCATGGGGCACTGCCTAGCCCTGCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLPEPPVQVTYT*LHGALPSPARQ Trigger: CTGCCTTGCAGGGCTAGGCAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CCCCCTGTGCAGCAATGCACTGTCCCCAGCAGCATGTaGCAGGTGAACTGCCACCTGACAGTCCTGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPVQQCTVPSSM*QVNCHLTVLQG Trigger: CCCCTGCAGGACTGTCAGGTGGCAGTTCACCTGCCACATGCTGCTGGGGACAGTGCATTGCTGCACAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | TGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTaGAGCCCATCCTCCAATTGGTCCAGGTTCTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: WGGLAGSGQPHR*SPSSNWSRFST Trigger: TGTTGAGAACCTGGACCAATTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CCA 72 bp | TGGCTGCTGTTTAATCTGCTGGTACCAGCATCCACCTaGGCCTCTGACACTGCTCCGGCTCCACCCCGACCC | + |
|
Preference number: 3 (lower is better) Translates to: WLLFNLLVPAST*ASDTAPAPPRP Trigger: GGGTCGGGGTGGAGCCGGAGCAGTGTCAGAGGCCCAGGTGGATGCTGGTACCAGCAGATTAAACAGCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | CAATGCACTGTCCCCAGCAGCATGTGGCAGGTGAACTaGCACCTGACAGTCCTGCAGGGGCTGTGTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QCTVPSSMWQVN*HLTVLQGLCEC Trigger: GCACTCACACAGCCCCTGCAGGACTGTCAGGTGGCAGTTCACCTGCCACATGCTGCTGGGGACAGTGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | CCTCTGTCTCTCCTTCCCTGTCTGTCCAACCCCCTGTaGAGCAATGCACTGTCCCCAGCAGCATGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSLLPCLSNPL*SNALSPAACGR Trigger: CCTGCCACATGCTGCTGGGGACAGTGCATTGCTGCACAGGGGGTTGGACAGACAGGGAAGGAGAGACAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | GGGGCACTGCCTAGCCCTGCAAGGCAGGCCATGAGGTaGAGTCATGGCTTTACCCAACGTCTCATGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: GALPSPARQAMR*SHGFTQRLMGP Trigger: AGGTCCCATGAGACGTTGGGTAAAGCCATGACTGCACCTCATGGCCTGCCTTGCAGGGCTAGGCAGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | TGTGAGTGCCCACAAGAGCCCAGTGAGAGCCGGGCATaGTGGTCCACGCCTTTAATACCAGCACTCGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CECPQEPSESRA*WSTPLIPALGR Trigger: CCTCCCGAGTGCTGGTATTAAAGGCGTGGACCACCATGCCCGGCTCTCACTGGGCTCTTGTGGGCACTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CCTCTGACACTGCTCCGGCTCCACCCCGACCCCTGCTaGTGGATACTGAAACTGCAAGTGGAGGTAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PLTLLRLHPDPC*WILKLQVEVET Trigger: GGTTTCTACCTCCACTTGCAGTTTCAGTATCCACCAGCAGGGGTCGGGGTGGAGCCGGAGCAGTGTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCAGAGGCCCAGGGCCTTaGGGGAAGGGACCATGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSRGPGP*GKGPWL Trigger: CAACCATGGTCCCTTCCCCAAAGGCCCTGGGCCTCT...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | CTGCCCTGCACTCAGCTCCAGAGTTACAGGAGACCCTaGAGACACCCAGACGGCTTGCAGATGTCCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPCTQLQSYRRP*RHPDGLQMSWN Trigger: ATTCCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAGCTGAGTGCAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CTGACACTGCTCCGGCTCCACCCCGACCCCTGCTGGTaGATACTGAAACTGCAAGTGGAGGTAGAAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LTLLRLHPDPCW*ILKLQVEVETS Trigger: AGAGGTTTCTACCTCCACTTGCAGTTTCAGTATCCACCAGCAGGGGTCGGGGTGGAGCCGGAGCAGTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | GTCAGTTCTGGCCATGCTGACGACACAATGGCTTCCTaGGATGTCAGGCTGACCTGGGGACACACTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSSGHADDTMAS*DVRLTWGHTDS Trigger: GGAGTCAGTGTGTCCCCAGGTCAGCCTGACATCCCAGGAAGCCATTGTGTCGTCAGCATGGCCAGAACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | ACTGAGGAGCAGGGATATGGGTGCGGCTCGCAGCCATaGTTAGGGACCCTAAACTCTGGAAAGCAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TEEQGYGCGSQP*LGTLNSGKQSQ Trigger: CTGGCTCTGCTTTCCAGAGTTTAGGGTCCCTAATCATGGCTGCGAGCCGCACCCATATCCCTGCTCCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | GGGACACGTCACAGTCCCCAGCTGGGGTCTAAGAGCTaGCCCTGCATACACAATGCCAATGTGCTCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTRHSPQLGSKS*PCIHNANVLCR Trigger: TCTACAGAGCACATTGGCATTGTGTATGCAGGGGCAGCTCTTAGACCCCAGCTGGGGACTGTGACGTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AGACATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTaGGTGGATGTCTGGAAGAGAGGCACCCCAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: RHGFPGPLSAGS*VDVWKRGTPDS Trigger: GCTATCTGGGGTGCCTCTCTTCCAGACATCCACGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | ATGGCTTTCCAGGACCTCTCAGTGCAGGTAGCTGCGTaGATGTCTGGAAGAGAGGCACCCCAGATAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MAFQDLSVQVAA*MSGREAPQIAA Trigger: TGCTGCTATCTGGGGTGCCTCTCTTCCAGACATCCACGCAGCTACCTGCACTGAGAGGTCCTGGAAAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CTCCATCCCAGGGTGCGTCTCTATCATTCAGGGGGTTaGGGAGTGACATTCACTCAGACCTGGGAACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHPRVRLYHSGG*GVTFTQTWEPG Trigger: ACCTGGTTCCCAGGTCTGAGTGAATGTCACTCCCCAACCCCCTGAATGATAGAGACGCACCCTGGGATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | ACAGCTGTCACAGAAAGTGTGGGAAAGCATCAGGACTaGCACATGCATGTCCAGCCGCACCTCCATCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TAVTESVGKHQD*HMHVQPHLHPR Trigger: CCTGGGATGGAGGTGCGGCTGGACATGCATGTGCCAGTCCTGATGCTTTCCCACACTTTCTGTGACAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | ACTGTGTATACATACACAGGGGGCAATGGCAGCCAGTaGCCAACAGAAAGGTCCAGAGGCAGCAGGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TVYTYTGGNGSQ*PTERSRGSRLV Trigger: GACCAGCCTGCTGCCTCTGGACCTTTCTGTTGGTCACTGGCTGCCATTGCCCCCTGTGTATGTATACACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | GAAACCTTCCCTCGCAGACCAGCAGCTGCATTCGTCTaGCATTCTGGGACACCACCCAAAGAGCAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ETFPRRPAAAFV*HSGTPPKEQQR Trigger: TCTCTGCTGCTCTTTGGGTGGTGTCCCAGAATGTCAGACGAATGCAGCTGCTGGTCTGCGAGGGAAGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | ATGCTGACGACACAATGGCTTCCTGGGATGTCAGGCTaGCCTGGGGACACACTGACTCCCACTTACTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLTTQWLPGMSG*PGDTLTPTYCQ Trigger: CTGACAGTAAGTGGGAGTCAGTGTGTCCCCAGGTCAGCCTGACATCCCAGGAAGCCATTGTGTCGTCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | CACCAAATCTCCCAGCAGGATGGCTGCTGTTTAATCTaGTGGTACCAGCATCCACCTGGGCCTCTGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: HQISQQDGCCLI*WYQHPPGPLTL Trigger: CAGTGTCAGAGGCCCAGGTGGATGCTGGTACCAGCAGATTAAACAGCAGCCATCCTGCTGGGAGATTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CGGACACCTCAGAATACGGGCTGGTTCAGGTCCATGTaGACCAGCATCTATCTCCTCCATCTGGGGCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: RTPQNTGWFRSM*TSIYLLHLGHH Trigger: ATGATGCCCCAGATGGAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCGTATTCTGAGGTGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CAAATCTCCCAGCAGGATGGCTGCTGTTTAATCTGCTaGTACCAGCATCCACCTGGGCCTCTGACACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QISQQDGCCLIC*YQHPPGPLTLL Trigger: GAGCAGTGTCAGAGGCCCAGGTGGATGCTGGTACCAGCAGATTAAACAGCAGCCATCCTGCTGGGAGATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | ACCCAACGTCTCATGGGACCTGCTGGCTCTATAGGATaGGCAGTGAGGTATGGCCAAGGTTATACCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQRLMGPAGSIG*AVRYGQGYTQG Trigger: GCCTTGGGTATAACCTTGGCCATACCTCACTGCCCATCCTATAGAGCCAGCAGGTCCCATGAGACGTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | GGCTGTGGCTTCTCAGAAGATAGATATCTTAAGGACTaGGGAGCAGGGATATGGGTGCGGCTCGCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GCGFSEDRYLKD*GAGIWVRLAAM Trigger: CATGGCTGCGAGCCGCACCCATATCCCTGCTCCTCAGTCCTTAAGATATCTATCTTCTGAGAAGCCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | CACAGTGCTGACAGGTGCTCATGTCCACAAACACATTaGCAGGGGACACAGTACACAGGGCTTGGGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: HSADRCSCPQTH*QGTQYTGLGDL Trigger: CAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | TCAGGTCCATGTGGACCAGCATCTATCTCCTCCATCTaGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPCGPASISSI*GIIMGKGCRSQ Trigger: CTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGATAGATGCTGGTCCACATGGACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | TCTTGGGGCTCAGAGGTGCCACATTGGCACCAGGTTTaGACACATGTCAGGCTTCATGGCCTTAACAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SWGSEVPHWHQV*THVRLHGLNRE Trigger: CTCTCTGTTAAGGCCATGAAGCCTGACATGTGTCCAAACCTGGTGCCAATGTGGCACCTCTGAGCCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | AGGGAGGTAATCCAAGGGAGATGGAGACGCCTGCTCTaGGGATATCCTCTGCCTGCTTCAATAGTGGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: REVIQGRWRRLL*GYPLPASIVGN Trigger: ATTCCCCACTATTGAAGCAGGCAGAGGATATCCTCAGAGCAGGCGTCTCCATCTCCCTTGGATTACCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTaGAGATGTCCTGGAATGTTCCCGTTCCTTAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVTGDPADTQTA*RCPGMFPFLKR Trigger: CCTTTTAAGGAACGGGAACATTCCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | GGTCTAAGAGCTGCCCCTGCATACACAATGCCAATGTaGTCTGTAGAGGAGAAGACCTTCCAAGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLRAAPAYTMPM*SVEEKTFQGGR Trigger: TCTGCCTCCTTGGAAGGTCTTCTCCTCTACAGAGCACATTGGCATTGTGTATGCAGGGGCAGCTCTTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AAAGGGTGTCGCTCTCAGAGCTCCATGGAGACCCTATaGTTCTGGGGAAGAGGTAGGCATAATGCACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGCRSQSSMETL*FWGRGRHNALF Trigger: GAAGAGTGCATTATGCCTACCTCTTCCCCAGAAGCATAGGGTCTCCATGGAGCTCTGAGAGCGACACCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | TGTCGCTCTCAGAGCTCCATGGAGACCCTATGCTTCTaGGGAAGAGGTAGGCATAATGCACTCTTCACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CRSQSSMETLCF*GRGRHNALFTS Trigger: AGAGGTGAAGAGTGCATTATGCCTACCTCTTCCCCAGAAGCATAGGGTCTCCATGGAGCTCTGAGAGCGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | ACTGGTGGCTTTTGTGGTCAGCATCCATCTGTCACATaGACAGACATGGCTTTCCAGGACCTCTCAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGGFCGQHPSVT*TDMAFQDLSVQ Trigger: CTGCACTGAGAGGTCCTGGAAAGCCATGTCTGTCCATGTGACAGATGGATGCTGACCACAAAAGCCACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | GGGACACCCATTCTTAGCATCCACTGGTGGCTTTTGTaGTCAGCATCCATCTGTCACATGGACAGACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GTPILSIHWWLL*SASICHMDRHG Trigger: GCCATGTCTGTCCATGTGACAGATGGATGCTGACCACAAAAGCCACCAGTGGATGCTAAGAATGGGTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGGATACTGAAACTGCAAGTGGAGGTAGAAACCTCTCTTCTCTGGTTCTGCAGTCCCAGAACTGCCCCTaGGAGGGACACCCATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VDTETASGGRNLSSLVLQSQNCP*EGHPFL Trigger: TAAGAATGGGTGTCCCTCCAAGGGGCAGTTCTGGGA...CTGCAGAACCAGAGAAGAGAGGTTTCTACCTCCACTTGCAGTTTCAGTATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR-3UTR CAA 90 bp | AGACACAGCTACACAGTGCTGACAGGTGCTCATGTCCACAAACACATTGACAGGCAGCCCATCCTCCAATaGGTCCAGGTTCTCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: RHSYTVLTGAHVHKHIDRQPILQ*VQVLNT Trigger: TGTGTTGAGAACCTGGACCAATTGGAGGATGGGCTG...CCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | GGAGGTAGAAACCTCTCTTCTCTGGTTCTGCAGGACTaGCACCATCTACAGCTGTCACAGAAAGTGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGRNLSSLVLQD*HHLQLSQKVWE Trigger: TTCCCACACTTTCTGTGACAGCTGTAGATGGTGCCAGTCCTGCAGAACCAGAGAAGAGAGGTTTCTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | CTGAAACTGCAAGTGGAGGTAGAAACCTCTCTTCTCTaGTTCTGCAGGACTGGCACCATCTACAGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LKLQVEVETSLL*FCRTGTIYSCH Trigger: GTGACAGCTGTAGATGGTGCCAGTCCTGCAGAACCAGAGAAGAGAGGTTTCTACCTCCACTTGCAGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | AGAGGCCCAGGGCCTTTGGGGAAGGGACCATGGTTGTaGATCACACATTTCTACGACGGCTTTGTCATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGPGPLGKGPWL*ITHFYDGFVIF Trigger: AAAAATGACAAAGCCGTCGTAGAAATGTGTGATTCACAACCATGGTCCCTTCCCCAAAGGCCCTGGGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | ACAGACCAGCACAAAACAGACACAGCTACACAGTGCTaGCAGGTGCTCATGTCCACAAACACATTGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TDQHKTDTATQC*QVLMSTNTLTG Trigger: CCCTGTCAATGTGTTTGTGGACATGAGCACCTGTCAGCACTGTGTAGCTGTGTCTGTTTTGTGCTGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | AAAATAGCACAATGGCACATTTTTCACGCTAGAGACTaGCTGAGACCCGACTCTCGGGAAGGAACACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: KIAQWHIFHARD*LRPDSREGTRM Trigger: CATCCGTGTTCCTTCCCGAGAGTCGGGTCTCAGCCAGTCTCTAGCGTGAAAAATGTGCCATTGTGCTATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CCA 72 bp | TGGGGTTCCCACGGCATCAGGGAGACCTTTTCCACCTaGAATGTGTATCCTATTGCACAAAGACCAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: WGSHGIRETFST*NVYPIAQRPET Trigger: AGTTTCTGGTCTTTGTGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | GTGTCAGGAATGGGCAGCTATGAAGCTAGGAGCATTTaGGGAGCCTGTGTCTCATCCTCCATTCACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VSGMGSYEARSI*GACVSSSIHKT Trigger: TGTTTTGTGAATGGAGGATGAGACACAGGCTCCTCAAATGCTCCTAGCTTCATAGCTGCCCATTCCTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | CAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTaGACAAAGACCAGAAACTGCCTGATGGTGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: QGDLFHLECVSY*TKTRNCLMVKQ Trigger: CTGTTTCACCATCAGGCAGTTTCTGGTCTTTGTGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR TCA 72 bp | AGCAATAAAAGGGAGCACTGGTCATATGTGGTGTGGTaGTTCCTTCCTAGTATTCAGGAGGTGGAAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SNKREHWSYVVW*FLPSIQEVEGD Trigger: ATCTCCTTCCACCTCCTGAATACTAGGAAGGAATCACCACACCACATATGACCAGTGCTCCCTTTTATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR GCA 72 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGCCCAGTTCTCTaGTTCCTTCAAAGCTGTAAAAGGCTTATTAACGGA | + |
|
Preference number: 3 (lower is better) Translates to: RERERERESPVL*FLQSCKRLING Trigger: TCCGTTAATAAGCCTTTTACAGCTTTGAAGGAAGCAGAGAACTGGGCTCTCTCTCTCTCTCTCTCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR TCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAGTAGTCGCTGCCCTGTaGGGAGGGCAGGTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQVVAAL*GGQVRA Trigger: AGCTCTGACCTGCCCTCCTCACAGGGCAGCGACTAC...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAACGAAGAGGTCCCCGGTaGCCACGAAGACAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQRRGPR*PRRQLP Trigger: TGGAAGCTGTCTTCGTGGGCACCGGGGACCTCTTCG...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAACAACATGGCTCTGGATaGAGAGCACCCGGCATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQQHGSG*RAPGIR Trigger: GCGAATGCCGGGTGCTCTCCATCCAGAGCCATGTTG...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAGTCCTCTGTAGGACGTaGTGCATGGCAGACACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQVLCRT*CMADTV Trigger: AACCGTGTCTGCCATGCAGCACGTCCTACAGAGGAC...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGTCCACGCCAGAAGCATaGCAGCGAAGAGGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPEPPVQVTYTCLHGALSTPEA*QRRGPR Trigger: CCGGGGACCTCTTCGCTGCCATGCTTCTGGCGTGGA...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGCGATCAGGTAGTCGCTaGCCTGTGAGGAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLPEPPVQVTYTCLHGALRSGSR*PVRRAG Trigger: ACCTGCCCTCCTCACAGGGCAGCGACTACCTGATCG...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAATCCTGCTTCAGCTTTTaGACACCGGATGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQSCFSF*TPDGPL Trigger: CAGAGGACCATCCGGTGTGCAAAAGCTGAAGCAGGA...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTGCAGATGTCCTGGCACAGCACTGTGGCCTaGACGACGATCTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSYRRPCRHPDGLQMSWHSTVA*TTISGS Trigger: GGACCCCGAGATCGTCGTGCAGGCCACAGTGCTGTG...CCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAAGCTTCTTCTTGGCTGTaGATTTTTCTGCCACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRTSRVGPAPQVQPILQASSWL*IFLPLS Trigger: GCTGAGTGGCAGAAAAATCCACAGCCAAGAAGAAGC...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGACTTTTGCACACCGGATaGTCCTCTGTAGGACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGLLHTG*SSVGRA Trigger: AGCACGTCCTACAGAGGACCATCCGGTGTGCAAAAG...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 72 bp | CACAAACACATTGACAGGGGACACAGTACACAGGGCTaGGGGACTTGGGCAGGAGACCACCTGAGCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKHIDRGHSTQG*GTWAGDHLSPE Trigger: CTCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTGTCAATGTGTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCCAGAGCCCCCAGTCCAAGTCACCTACACCTGCCTGCATGGGGCACTGATGTCCCTTTTGCTCTaGACCATCCTCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPEPPVQVTYTCLHGALMSLLL*TILSSS Trigger: GCTGGAGCTGAGGATGGTCCAGAGCAAAAGGGACAT...CAGTGCCCCATGCAGGCAGGTGTAGGTGACTTGGACTGGGGGCTCTGGAAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 72 bp | CCTCCATCCCAGGGTGCGTCTCTATCATTCAGGGGGTaGGGGAGTGACATTCACTCAGACCTGGGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSQGASLSFRG*GSDIHSDLGTR Trigger: CCTGGTTCCCAGGTCTGAGTGAATGTCACTCCCCAACCCCCTGAATGATAGAGACGCACCCTGGGATGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTAAGGCAGACGTTACAGCTTTTCACAGGGATGGAGACGGACACCTCAATCCTCAGCTCCAGCTaGGCGGGGCTGGGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MALRQTLQLFTGMETDTSILSSS*AGLGFC Trigger: ACAGAAGCCCAGCCCCGCTCAGCTGGAGCTGAGGAT...TGAGGTGTCCGTCTCCATCCCTGTGAAAAGCTGTAACGTCTGCCTTAGAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCTCGAAGGCTTCTTCTTaGCTGTGGATTTTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPSKASS*LWIFLP Trigger: TGGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGA...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | CTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTGCAGATGTCCTGGTCAAATCCCAAAACCTaGAGAGGGAACATGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSYRRPCRHPDGLQMSWSNPKT*RGNMAA Trigger: AGCGGCCATGTTCCCTCTGCAGGTTTTGGGATTTGA...CCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCTCGGGACCCATACAGTaGAGCATGTCCATCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSSGPIQ*SMSITS Trigger: CGAGGTGATGGACATGCTGCACTGTATGGGTCCCGA...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCTAAGGCAGACGTTACAGCTTTTCACAGGGATGGAGACGGACACCTCAACGGGGAGGAGGTCCTaGGGAACGTACATGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MALRQTLQLFTGMETDTSTGRRS*GTYMEP Trigger: AGGCTCCATGTACGTTCCCCAGGACCTCCTCCCCGT...TGAGGTGTCCGTCTCCATCCCTGTGAAAAGCTGTAACGTCTGCCTTAGAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 72 bp | AACCTCACATTGAACCTGACCTCCCAGAACTGCCCCTaGGAGGGACACCCATTCTTAGCATCCACTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLTLNLTSQNCP*EGHPFLASTGG Trigger: GCCACCAGTGGATGCTAAGAATGGGTGTCCCTCCAAGGGGCAGTTCTGGGAGGTCAGGTTCAATGTGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAGTTACAGGAGACCCTGCAGACACCCAGACGGCTTGCAGATGTCCTGGGTAGCCTGTGTGGTTTaGAAACTGCACAGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSYRRPCRHPDGLQMSWVACVV*KLHRVH Trigger: GTGAACTCTGTGCAGTTTTCAAACCACACAGGCTAC...CCAGGACATCTGCAAGCCGTCTGGGTGTCTGCAGGGTCTCCTGTAACTCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR CCA 90 bp | AACTCTGGAAAGCAGAGCCAGGAAGTTCACCCCCGAGCAGTAGACAATGGGACACCTGGGGAACGTACATaGAGCCTTCCCCATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NSGKQSQEVHPRAVDNGTPGERT*SLPHST Trigger: AGTGGAATGGGGAAGGCTCCATGTACGTTCCCCAGG...TGTCCCATTGTCTACTGCTCGGGGGTGAACTTCCTGGCTCTGCTTTCCAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 72 bp | CCTGGGGACACACTGACTCCCACTTACTGTCAGGTGTaGCACAACGCCAAGTCTGAGGCCCAACAGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDTLTPTYCQV*HNAKSEAQQKD Trigger: ATCTTTCTGTTGGGCCTCAGACTTGGCGTTGTGCAACACCTGACAGTAAGTGGGAGTCAGTGTGTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | ATCTCCTCCATCTGGGGCATCATAATGGGGAAAGGGTGTCGCTCTCAGAGCTCCGGCTGTGGATTTTTCTaGCACTCAGCAACTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSIWGIIMGKGCRSQSSGCGFF*HSATQP Trigger: AGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCC...GGAGCTCTGAGAGCGACACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| 3UTR CAA 72 bp | TCCCTACAGAGACTGCAGCTCTATTGTAACCTCACATaGAACCTGACCTCCCAGAACTGCCCCTTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLQRLQLYCNLT*NLTSQNCPLEG Trigger: TCCCTCCAAGGGGCAGTTCTGGGAGGTCAGGTTCAATGTGAGGTTACAATAGAGCTGCAGTCTCTGTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCACCTCGATGTCCCTTTTaGTCTGGACCATCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHGIRETFSTWNVYPIAPRCPF*SGPSSA Trigger: AGCTGAGGATGGTCCAGAGCAAAAGGGACATCGAGG...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGAGACACAGAAACTCTAATGCAGGAACAAGGGAAAGACCAGAATGGCCGGACAACATGGCTCTaGATGGAGAGCACCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSRDTETLMQEQGKDQNGRTTWL*MESTRH Trigger: ATGCCGGGTGCTCTCCATCCAGAGCCATGTTGTCCG...GCCATTCTGGTCTTTCCCTTGTTCCTGCATTAGAGTTTCTGTGTCTCTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CCA 90 bp | GTCTATACACAATCAGGACTGTGTATACATACACAGGGGGCAATGGCAGCCAGTCCTGCAGAGGGAACATaGCCGCTCTGTTACCCACGT | + |
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Preference number: 4 (lower is better) Translates to: VYTQSGLCIHTQGAMAASPAEGT*PLCYPR Trigger: ACGTGGGTAACAGAGCGGCCATGTTCCCTCTGCAGG...ACTGGCTGCCATTGCCCCCTGTGTATGTATACACAGTCCTGATTGTGTATAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CCA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCACAATGTCCACCACCATaGCCAGGAAAGACTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSHGIRETFSTWNVYPIAQCPPP*PGKTCL Trigger: GAGACAAGTCTTTCCTGGCCATGGTGGTGGACATTG...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR GCA 90 bp | GCTAACCCTGGGCTAATGCAGCTTCCTTCCCAAGCACATTACTTCCTTACTAAATTGAGATTGTCCGGGTaGTTGTGTGTCCACGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ANPGLMQLPSQAHYFLTKLRLSG*LCVHAR Trigger: TCTGGCGTGGACACACAAGCACCCGGACAATCTCAA...TTTAGTAAGGAAGTAATGTGCTTGGGAAGGAAGCTGCATTAGCCCAGGGTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR GCA 90 bp | GTGGATACTGAAACTGCAAGTGGAGGTAGAAACCTCTCTTCTCTGGTTCTGCAGCTTCTGTCCTTCTCCTaGTTCAGCTTTTGCACACCG | + |
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Preference number: 4 (lower is better) Translates to: VDTETASGGRNLSSLVLQLLSFS*FSFCTP Trigger: CGGTGTGCAAAAGCTGAAGCAGGAGAAGGACAGAAG...CTGCAGAACCAGAGAAGAGAGGTTTCTACCTCCACTTGCAGTTTCAGTATCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CCA 90 bp | GCTAACCCTGGGCTAATGCAGCTTCCTTCCCAAGCACATTACTTCCTTACTAAAAACTCAGCCTCAAACTaGTTGGGAGTGATGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: ANPGLMQLPSQAHYFLTKNSASN*LGVMMS Trigger: TGACATCATCACTCCCAACCAGTTTGAGGCTGAGTT...TTTAGTAAGGAAGTAATGTGCTTGGGAAGGAAGCTGCATTAGCCCAGGGTTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| 3UTR CAA 72 bp | TCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATaGCACAAAGACCAGAAACTGCCTGATGGTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: SGRPFPPGMCIL*HKDQKLPDGET Trigger: TGTTTCACCATCAGGCAGTTTCTGGTCTTTGTGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS TCA 90 bp | CCGCATCCTCTGGCTACCCAGCGCGATCAGGTAGTCGCTGCCCTGTaGGGAGGGCAGGTCAGAGCTGGTGATGACCACAGTGTCGGGACC | + |
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Preference number: 5 (lower is better) Translates to: PHPLATQRDQVVAAL*GGQVRAGDDHSVGT Trigger: GGTCCCGACACTGTGGTCATCACCAGCTCTGACCTGCCCTCCTCACAGGGCAGCGACTACCTGATCGCGCTGGGTAGCCAGAGGATGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | CTGGGGAGGACTAGCAGGGTCGGGCCAGCCCCACAGGTGCAGCCCATCCTCCAACTCCTGCTTCAGCTTTaGCACACCGGATGGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LGRTSRVGPAPQVQPILQLLLQL*HTGWSS Trigger: AGAGGACCATCCGGTGTGCAAAAGCTGAAGCAGGAG...TTGGAGGATGGGCTGCACCTGTGGGGCTGGCCCGACCCTGCTAGTCCTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 90 bp | CAGCTTCCACTTTGCGCATCTCCATCCGGATGCGCTGGGTCACCGTaGAGCCGTCAGGTTTCCGCATCCTCTGGCTACCCAGCGCGATCA | + |
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Preference number: 5 (lower is better) Translates to: QLPLCASPSGCAGSP*SRQVSASSGYPARS Trigger: TGATCGCGCTGGGTAGCCAGAGGATGCGGAAACCTGACGGCTCCACGGTGACCCAGCGCATCCGGATGGAGATGCGCAAAGTGGAAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | GGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCGGATCCTCGATGTCCCTTTaGCTCTGGACCATCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GTQYTGLGDLGRRPPEPGSSMSL*LWTILS Trigger: GCTGAGGATGGTCCAGAGCAAAAGGGACATCGAGGA...TCCGGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | CAGGGGACACAGTACACAGGGCTTGGGGACTTGGGCAGGAGACCACCTGAGCCCTCAGCCTCAAACTGGTaGGGAGTGATGATGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QGTQYTGLGDLGRRPPEPSASNW*GVMMSA Trigger: GGCTGACATCATCACTCCCAACCAGTTTGAGGCTGA...GGGCTCAGGTGGTCTCCTGCCCAAGTCCCCAAGCCCTGTGTACTGTGTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS GCA 90 bp | GGCAGGTCAGAGCTGGTGATGACCACAGTGTCGGGACCCATACAGTaGAGCATGTCCATCACCTCGAAGGCTTCTTCTTGGCTGTGGATT | + |
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Preference number: 5 (lower is better) Translates to: GRSELVMTTVSGPIQ*SMSITSKASSWLWI Trigger: AATCCACAGCCAAGAAGAAGCCTTCGAGGTGATGGACATGCTGCACTGTATGGGTCCCGACACTGTGGTCATCACCAGCTCTGACCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS GCA 90 bp | CCTGCTTCAGCTTTTGCACACCGGATGGTCCTCTGTAGGACGTGCTaGATGGCAGACACGGTTTTCTCACAGGCCACCTTGAGATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PASAFAHRMVLCRTC*MADTVFSQATLRLS Trigger: GGACAATCTCAAGGTGGCCTGTGAGAAAACCGTGTCTGCCATGCAGCACGTCCTACAGAGGACCATCCGGTGTGCAAAAGCTGAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | ACACCTCAGAATACGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCAAGGCGAGAGTTCTGTaGCTTCAGCTCCCGCACAAT | + |
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Preference number: 5 (lower is better) Translates to: TPQNTGWFRSMWTSIYLLKARVL*LQLPHN Trigger: ATTGTGCGGGAGCTGAAGCAACAGAACTCTCGCCTT...GAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCGTATTCTGAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 90 bp | TCTTGGCTGTGGATTTTTCTGCCACTCAGCAACTCAGCCTCAAACTaGTTGGGAGTGATGATGTCAGCCACGGGTACCACTTTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SWLWIFLPLSNSASN*LGVMMSATGTTLSL Trigger: CAGGGACAAAGTGGTACCCGTGGCTGACATCATCACTCCCAACCAGTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGAGACACAGAAACTCTAATGCAGGAACAAGGGAAAGACCAGAATGGCCCTTCCCCATTCCACTaGTCGCCCATCACAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSRDTETLMQEQGKDQNGPSPFH*SPITGS Trigger: TGACCCTGTGATGGGCGACAAGTGGAATGGGGAAGG...GCCATTCTGGTCTTTCCCTTGTTCCTGCATTAGAGTTTCTGTGTCTCTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGAGACACAGAAACTCTAATGCAGGAACAAGGGAAAGACCAGAATGGCAGATTGTCCGGGTGCTaGTGTGTCCACGCCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRDTETLMQEQGKDQNGRLSGC*CVHARS Trigger: GCTTCTGGCGTGGACACACAAGCACCCGGACAATCT...GCCATTCTGGTCTTTCCCTTGTTCCTGCATTAGAGTTTCTGTGTCTCTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | ACACCTCAGAATACGGGCTGGTTCAGGTCCATGTGGACCAGCATCTATCTCCTCCGTAGCCTGTGTGGTTaGAAAACTGCACAGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TPQNTGWFRSMWTSIYLLRSLCG*KTAQSS Trigger: TGAACTCTGTGCAGTTTTCAAACCACACAGGCTACG...GAGGAGATAGATGCTGGTCCACATGGACCTGAACCAGCCCGTATTCTGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS-3UTR CAA 90 bp | GGTTCCCACGGCATCAGGGAGACCTTTTCCACCTGGAATGTGTATCCTATTGCACTCGAAGGCTTCTTCTaGGCTGTGGATTTTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GSHGIRETFSTWNVYPIALEGFF*AVDFSA Trigger: GGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGAG...TGCAATAGGATACACATTCCAGGTGGAAAAGGTCTCCCTGATGCCGTGGGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 90 bp | ATACAGTGCAGCATGTCCATCACCTCGAAGGCTTCTTCTTGGCTGTaGATTTTTCTGCCACTCAGCAACTCAGCCTCAAACTGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: IQCSMSITSKASSWL*IFLPLSNSASNWLG Trigger: TCCCAACCAGTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGAGGTGATGGACATGCTGCACTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS TCA 72 bp | CTGGCTACCCAGCGCGATCAGGTAGTCGCTGCCCTGTaGGGAGGGCAGGTCAGAGCTGGTGATGACCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LATQRDQVVAAL*GGQVRAGDDHS Trigger: ACTGTGGTCATCACCAGCTCTGACCTGCCCTCCTCACAGGGCAGCGACTACCTGATCGCGCTGGGTAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | CTTTGCGCATCTCCATCCGGATGCGCTGGGTCACCGTaGAGCCGTCAGGTTTCCGCATCCTCTGGCTACCCA | + |
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Preference number: 6 (lower is better) Translates to: LCASPSGCAGSP*SRQVSASSGYP Trigger: TGGGTAGCCAGAGGATGCGGAAACCTGACGGCTCCACGGTGACCCAGCGCATCCGGATGGAGATGCGCAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | GATTGTCCGGGTGCTTGTGTGTCCACGCCAGAAGCATaGCAGCGAAGAGGTCCCCGGTGCCCACGAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: DCPGACVSTPEA*QRRGPRCPRRQ Trigger: CTGTCTTCGTGGGCACCGGGGACCTCTTCGCTGCCATGCTTCTGGCGTGGACACACAAGCACCCGGACAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS GCA 72 bp | TCCACGCCAGAAGCATGGCAGCGAAGAGGTCCCCGGTaGCCACGAAGACAGCTTCCACTTTGCGCATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: STPEAWQRRGPR*PRRQLPLCASP Trigger: TGGAGATGCGCAAAGTGGAAGCTGTCTTCGTGGGCACCGGGGACCTCTTCGCTGCCATGCTTCTGGCGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | ACAGCTTCCACTTTGCGCATCTCCATCCGGATGCGCTaGGTCACCGTGGAGCCGTCAGGTTTCCGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: TASTLRISIRMR*VTVEPSGFRIL Trigger: GAGGATGCGGAAACCTGACGGCTCCACGGTGACCCAGCGCATCCGGATGGAGATGCGCAAAGTGGAAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CAA 90 bp | GCCTCAAACTGGTTGGGAGTGATGATGTCAGCCACGGGTACCACTTaGTCCCTGTACACGGGGAGGAGGTCCTGGGGAACGTACATGGAG | + |
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Preference number: 6 (lower is better) Translates to: ASNWLGVMMSATGTT*SLYTGRRSWGTYME Trigger: CTCCATGTACGTTCCCCAGGACCTCCTCCCCGTGTACAGGGACAAAGTGGTACCCGTGGCTGACATCATCACTCCCAACCAGTTTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS GCA 72 bp | GCTTTTGCACACCGGATGGTCCTCTGTAGGACGTGCTaGATGGCAGACACGGTTTTCTCACAGGCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: AFAHRMVLCRTC*MADTVFSQATL Trigger: CAAGGTGGCCTGTGAGAAAACCGTGTCTGCCATGCAGCACGTCCTACAGAGGACCATCCGGTGTGCAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | TCTGTCCTTCTCCTGCTTCAGCTTTTGCACACCGGATaGTCCTCTGTAGGACGTGCTGCATGGCAGACACGG | + |
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Preference number: 6 (lower is better) Translates to: SVLLLLQLLHTG*SSVGRAAWQTR Trigger: CCGTGTCTGCCATGCAGCACGTCCTACAGAGGACCATCCGGTGTGCAAAAGCTGAAGCAGGAGAAGGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS GCA 72 bp | ACAGGGTCACACACATACACAAGGCGAGAGTTCTGTTaGTTCAGCTCCCGCACAATGTCCACCACCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: TGSHTYTRREFC*FSSRTMSTTMA Trigger: GGCCATGGTGGTGGACATTGTGCGGGAGCTGAAGCAACAGAACTCTCGCCTTGTGTATGTGTGTGACCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CAA 72 bp | CACAGGGTCACACACATACACAAGGCGAGAGTTCTGTaGCTTCAGCTCCCGCACAATGTCCACCACCATGGC | + |
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Preference number: 6 (lower is better) Translates to: HRVTHIHKARVL*LQLPHNVHHHG Trigger: GCCATGGTGGTGGACATTGTGCGGGAGCTGAAGCAACAGAACTCTCGCCTTGTGTATGTGTGTGACCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS TCA 72 bp | TTGACATCGTTCACCTTGAGACCCTCGTACAGCTCATaGAGTTCCTGGGACTTCAGCACCTGGCCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LTSFTLRPSYSS*SSWDFSTWPFQ Trigger: TTGGAAGGGCCAGGTGCTGAAGTCCCAGGAACTTCATGAGCTGTACGAGGGTCTCAAGGTGAACGATGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | CATCAACCTCAAATCCCAAAACCTGCAGAGGGAACATaGCCGCTCTGTTACCCACGTAGCCACGGACAACAT | + |
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Preference number: 6 (lower is better) Translates to: HQPQIPKPAEGT*PLCYPRSHGQH Trigger: ATGTTGTCCGTGGCTACGTGGGTAACAGAGCGGCCATGTTCCCTCTGCAGGTTTTGGGATTTGAGGTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CAA 90 bp | TGGCTGTGGATTTTTCTGCCACTCAGCAACTCAGCCTCAAACTGGTaGGGAGTGATGATGTCAGCCACGGGTACCACTTTGTCCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: WLWIFLPLSNSASNW*GVMMSATGTTLSLY Trigger: GTACAGGGACAAAGTGGTACCCGTGGCTGACATCATCACTCCCAACCAGTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CAA 90 bp | GGGACCCATACAGTGCAGCATGTCCATCACCTCGAAGGCTTCTTCTaGGCTGTGGATTTTTCTGCCACTCAGCAACTCAGCCTCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: GTHTVQHVHHLEGFF*AVDFSATQQLSLKL Trigger: CAGTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGAGGTGATGGACATGCTGCACTGTATGGGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | TGGATTTTTCTGCCACTCAGCAACTCAGCCTCAAACTaGTTGGGAGTGATGATGTCAGCCACGGGTACCACT | + |
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Preference number: 6 (lower is better) Translates to: WIFLPLSNSASN*LGVMMSATGTT Trigger: AGTGGTACCCGTGGCTGACATCATCACTCCCAACCAGTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CAA 72 bp | ACAGTGCAGCATGTCCATCACCTCGAAGGCTTCTTCTaGGCTGTGGATTTTTCTGCCACTCAGCAACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TVQHVHHLEGFF*AVDFSATQQLS Trigger: GCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGAGGTGATGGACATGCTGCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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| CDS CCA 72 bp | AGCATGTCCATCACCTCGAAGGCTTCTTCTTGGCTGTaGATTTTTCTGCCACTCAGCAACTCAGCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SMSITSKASSWL*IFLPLSNSASN Trigger: GTTTGAGGCTGAGTTGCTGAGTGGCAGAAAAATCCACAGCCAAGAAGAAGCCTTCGAGGTGATGGACATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041616.15 |
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