Pregenerated sensors for PDXDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022680Ensembl transcript IDs: ENSMUST00000023361.12, ENSMUST00000115802.2, ENSMUST00000115804.9
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTaGGTGTTTGATGGCAGGTATGAGCTGTCTGTCTTGGGCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: VLEPTVLFSGSASAS*VFDGRYELSVLGTV Trigger: CACAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACACTCAGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR CCA 90 bp | GACATGAGAAGCTGGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTaGGGAAGAGACAGGCTGACGATTGAGGTTTCTAGTCTTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: DMRSWVCCACFQSSY*GRDRLTIEVSSLAE Trigger: TTCAGCAAGACTAGAAACCTCAATCGTCAGCCTGTCTCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR TCA 90 bp | TGTAGTTTCCGCTTCAGTGGGAGGTCCTGTCTTGTCTTAAACAACTaGAGACACAGGGCACAGGTGCCTGGTCTCAAGTATGTGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: CSFRFSGRSCLVLNN*RHRAQVPGLKYVPA Trigger: TGCTGGCACATACTTGAGACCAGGCACCTGTGCCCTGTGTCTTCAGTTGTTTAAGACAAGACAGGACCTCCCACTGAAGCGGAAACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CCA 90 bp | TCAAAACTGAAAATTCCCACTGGCATGATTTGGGAATTCAAGGAATaGCCAATCAGCTTCCACAGAGCTGGTAGTGATGGTATGCACACC | + |
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Preference number: 1 (lower is better) Translates to: SKLKIPTGMIWEFKE*PISFHRAGSDGMHT Trigger: GGTGTGCATACCATCACTACCAGCTCTGTGGAAGCTGATTGGCCATTCCTTGAATTCCCAAATCATGCCAGTGGGAATTTTCAGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR-3UTR TCA 90 bp | TCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTAGACCTACCTGGCTCTaGGGCCCTGCTGCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SLSSRLSWNPQCSSLGQPRPTWL*GPAAAH Trigger: GTGAGCAGCAGCAGGGCCTCAGAGCCAGGTAGGTCT...AGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCCTGCTGCTGCTCACTaGACATGTGACCTGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: PHCHPGCPGTHSALLWVSPAAAH*TCDLRP Trigger: AGGTCTCAGGTCACATGTCCAGTGAGCAGCAGCAGG...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTCAGGGAAGCATTTGGTaGTGGCAGCCTTGTTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: SRLSWNPQCSSLGQPQPPQGSIW*WQPCCY Trigger: GTAACAACAAGGCTGCCACCACCAAATGCTTCCCTG...AGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCTACGGGAGGTCAATGTaGGCAGCTTATCAGCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PHCHPGCPGTHSALLWVSYGRSM*AAYQLR Trigger: CCTTAGCTGATAAGCTGCGCACATTGACCTCCCGTA...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCTGGTTGCAGCAAGATaGCAAGCAAATCCTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASLSSRLSWNPQCSSLGQLVAAR*QANPRG Trigger: ACCTCTAGGATTTGCTTGTCATCTTGCTGCAACCAG...CTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTATGTAGGCATGATCTGTAGCACTGACATGAGAAGCTGGGTGTGCTGTGCATCAGCCTCAGCCTCCTaGGTGTTTGATGGCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: CYVGMICSTDMRSWVCCASASAS*VFDGRY Trigger: ATACCTGCCATCAAACACTCAGGAGGCTGAGGCTGA...TGCACAGCACACCCAGCTTCTCATGTCAGTGCTACAGATCATGCCTACATAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR-3UTR GCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCTCCTGGAACCCACAGTaGTCTTCTCTGGGTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PRPFFYSFCETRPHCHPGSWNPQ*SSLGQP Trigger: AGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGA...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR TCA 90 bp | TACGGGAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACTGGTTGCAGCAAGATaGCAAGCAAATCCTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: YGRSMCAAYQLRGQTTLELVAAR*QANPRG Trigger: ACCTCTAGGATTTGCTTGTCATCTTGCTGCAACCAG...TTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTCCCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGGTGAACTCTTTTATGTaGCATGATGACTACTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ASLSSRLSWNPQCSSLGQVNSFM*HDDYLL Trigger: AAGCAAGTAGTCATCATGTCACATAAAAGAGTTCAC...CTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGTCAAATCCAGCCCTACAGAAGGTACGAGAAGGAAAACACCAACACAAGGAGGCAGAGGCAGGTaGATGTCTGAGTTCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NKVKSSPTEGTRRKTPTQGGRGR*MSEFEA Trigger: GGCCTCGAACTCAGACATTCACCTGCCTCTGCCTCC...TTGTGTTGGTGTTTTCCTTCTCGTACCTTCTGTAGGGCTGGATTTGACTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAAGTTTAAAGGCCAGCCTGGTCTACCACAGTCAGTCCCTGTCTCAAAAAGCACAGGGAAGCATTTaGTGGTGGCAGCCTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SQSLKASLVYHSQSLSQKAQGSI*WWQPCC Trigger: ACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGC...TTTTTGAGACAGGGACTGACTGTGGTAGACCAGGCTGGCCTTTAAACTTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CAA 90 bp | TATGTGCCAGCAACGCAGGCCCCAGCAAGCTCCAAGTCTGCTTGTTaGTGTAGTGCTAACAACATCTCAGGAAAATGTTCAGAGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: YVPATQAPASSKSAC*CSANNISGKCSETD Trigger: GTCTGTCTCTGAACATTTTCCTGAGATGTTGTTAGCACTACACAAACAAGCAGACTTGGAGCTTGCTGGGGCCTGCGTTGCTGGCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR-3UTR GCA 90 bp | TGCTATGTAGGCATGATCTGTAGCACTGACATGAGAAGCTGGGTGTGCTGTGCACTGGTAGTGATGGTATaGACACCTGTGATCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: CYVGMICSTDMRSWVCCALVVMV*TPVIPH Trigger: ATGTGGGATCACAGGTGTGCATACCATCACTACCAG...TGCACAGCACACCCAGCTTCTCATGTCAGTGCTACAGATCATGCCTACATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCCGCCATTCCCACAAGTaGATTTCTGGTTGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PRPFFYSFCETRPHCHPGRHSHK*ISGCSK Trigger: CTTGCTGCAACCAGAAATCCACTTGTGGGAATGGCG...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTGTACAATGCAAACCAAAAAGAGCCTTTaGCCAGACAGGTTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KAGNNLTPAKPKEKCTMQTKKSL*PDRLRA Trigger: TGCCCTCAACCTGTCTGGCCAAAGGCTCTTTTTGGT...TTGCATTGTACACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCACAAGCATGGAGGAACTAAAAAGTCACATAACAGAAGGGCCTGGACATGACCAATTTCCTTCATaGACATTGATGCAAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSTSMEELKSHITEGPGHDQFPS*TLMQKY Trigger: GTACTTTTGCATCAATGTTCATGAAGGAAATTGGTC...ATGTCCAGGCCCTTCTGTTATGTGACTTTTTAGTTCCTCCATGCTTGTGGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| 3UTR TCA 72 bp | CTGGCTCTGAGGCCCTGCTGCTGCTCACTGGACATGTaGCCTGAGACCTCTCACCATCAGCTTCCCCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: LALRPCCCSLDM*PETSHHQLPLE Trigger: CTCAAGGGGAAGCTGATGGTGAGAGGTCTCAGGTCACATGTCCAGTGAGCAGCAGCAGGGCCTCAGAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR GCA 72 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTaGTCTTCTCTGGGTCAGCCTCAGCCTCCTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: ASLSSRLSWNPQ*SSLGQPQPPEC Trigger: ACACTCAGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CAA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTTGGTGGTGGCAGCCTaGTTGTTACGGGAGGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: VIQAVLEPTVLFSGSASALVVAA*LLREVN Trigger: ATTGACCTCCCGTAACAACAAGGCTGCCACCACCAA...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CAA 90 bp | CATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCACCATCAGCTTCCCCTaGAGAGGACAGCATGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: HPGCPGTHSALLWVSLSLTISFP*RGQHVV Trigger: GACAACATGCTGTCCTCTCAAGGGGAAGCTGATGGT...GAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CAA 90 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGACCATCAGCTTCCCCTaGAGAGGACAGCATGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASLSSRLSWNPQCSSLGQTISFP*RGQHVV Trigger: GACAACATGCTGTCCTCTCAAGGGGAAGCTGATGGT...CTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCAGCCTCCTGAGTGTTaGATGGCAGGTATGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LSSRLSWNPQCSSLGQPQQPPEC*MAGMSC Trigger: ACAGCTCATACCTGCCATCAAACACTCAGGAGGCTG...CTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR GCA 72 bp | TGTAGCCCTGGCTGTCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CSPGCPRTQKSA*LCLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCAGGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR TCA 72 bp | CCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTaGGTGTTTGATGGCAGGTATGAGCTGTCTGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: PTVLFSGSASAS*VFDGRYELSVL Trigger: CAAGACAGACAGCTCATACCTGCCATCAAACACTCAGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR GCA 72 bp | TGTAGCACTGACATGAGAAGCTGGGTGTGCTGTGCATaGTTCCAGTCCTCGTACTGGGGAAGAGACAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CSTDMRSWVCCA*FQSSYWGRDRL Trigger: CAGCCTGTCTCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTCAGTGCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CCA 72 bp | TGTCTTAAACAACTGAAGACACAGGGCACAGGTGCCTaGTCTCAAGTATGTGCCAGCAACGCAGGCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CLKQLKTQGTGA*SQVCASNAGPS Trigger: GCTGGGGCCTGCGTTGCTGGCACATACTTGAGACCAGGCACCTGTGCCCTGTGTCTTCAGTTGTTTAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR GCA 72 bp | GGCATGATCTGTAGCACTGACATGAGAAGCTGGGTGTaGTGTGCATGCTTCCAGTCCTCGTACTGGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: GMICSTDMRSWV*CACFQSSYWGR Trigger: TCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTCAGTGCTACAGATCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CCA 72 bp | AGCTGGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTaGGGAAGAGACAGGCTGACGATTGAGGTTTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: SWVCCACFQSSY*GRDRLTIEVSS Trigger: ACTAGAAACCTCAATCGTCAGCCTGTCTCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTCAGTGTCCTTACAGCTaGTCATGGAAATGGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SRLSWNPQCSSLGQPQPPQCPYS*SWKWFF Trigger: AAAGAACCATTTCCATGACAAGCTGTAAGGACACTG...AGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR CCA 72 bp | AGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTaGCAGCCTTGTTGTTACGGGAGGTCAATGTGCGCA | + |
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Preference number: 3 (lower is better) Translates to: SKHSSAQGSIWW*QPCCYGRSMCA Trigger: TGCGCACATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR TCA 72 bp | CGCTTCAGTGGGAGGTCCTGTCTTGTCTTAAACAACTaGAGACACAGGGCACAGGTGCCTGGTCTCAAGTAT | + |
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Preference number: 3 (lower is better) Translates to: RFSGRSCLVLNN*RHRAQVPGLKY Trigger: ATACTTGAGACCAGGCACCTGTGCCCTGTGTCTTCAGTTGTTTAAGACAAGACAGGACCTCCCACTGAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CCA 72 bp | TATGTAGGCATGATCTGTAGCACTGACATGAGAAGCTaGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTGG | + |
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Preference number: 3 (lower is better) Translates to: YVGMICSTDMRS*VCCACFQSSYW Trigger: CCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTCAGTGCTACAGATCATGCCTACATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| 3UTR CCA 72 bp | AAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTaGTGGCAGCCTTGTTGTTACGGGAGGTCAATGTGC | + |
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Preference number: 3 (lower is better) Translates to: KSKHSSAQGSIW*WQPCCYGRSMC Trigger: GCACATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR CCA 72 bp | ATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTaGTGGTGGCAGCCTTGTTGTTACGGGAGGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: IKSKHSSAQGSI*WWQPCCYGRSM Trigger: CATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR-3UTR CAA 90 bp | CTGCAAGTCACAAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTAACCAAAAAGAGCCTTaGGCCAGACAGGTTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LQVTKQEIISHQQSQKRSNQKEP*ARQVEG Trigger: GCCCTCAACCTGTCTGGCCAAAGGCTCTTTTTGGTT...ACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTTGTGACTTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGCAGTGTCCTTACAGCTaGTCATGGAAATGGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWQCPYS*SWKWFF Trigger: AAAGAACCATTTCCATGACAAGCTGTAAGGACACTG...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| 3UTR CCA 72 bp | AAAATTCCCACTGGCATGATTTGGGAATTCAAGGAATaGCCAATCAGCTTCCACAGAGCTGGTAGTGATGGT | + |
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Preference number: 3 (lower is better) Translates to: KIPTGMIWEFKE*PISFHRAGSDG Trigger: ACCATCACTACCAGCTCTGTGGAAGCTGATTGGCCATTCCTTGAATTCCCAAATCATGCCAGTGGGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS-3UTR GCA 90 bp | TCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTGTGGCCCTGGGAGGCTaGTCAGGGCTGTGGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLSSRLSWNPQCSSLGQPVALGG*SGLWAS Trigger: AGAGGCCCACAGCCCTGAGCAGCCTCCCAGGGCCAC...AGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS-3UTR CCA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCGAGTGCCTAGGGGTGTaGGAGGTGGTGTCACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VIQAVLEPTVLFSGSASAECLGV*EVVSPQ Trigger: CTGGGGTGACACCACCTCCCACACCCCTAGGCACTC...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR TCA 90 bp | TCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTCAATTTCCCGGGCTGTaGCTGCAATGGTCTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: SRLSWNPQCSSLGQPQPPQFPGL*LQWSPL Trigger: TAGTGGAGACCATTGCAGTCACAGCCCGGGAAATTG...AGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CCA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCGCCTTGGAGTGGCCCTaGAATATCCTCAGATACTGG | + |
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Preference number: 4 (lower is better) Translates to: VIQAVLEPTVLFSGSASAALEWP*NILRYW Trigger: CCAGTATCTGAGGATATTCCAGGGCCACTCCAAGGC...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR GCA 90 bp | CTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCATATCTTGTCCACTaGCTTGGAGTGGCCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LSSRLSWNPQCSSLGQPQPYLVH*LGVALE Trigger: TTCCAGGGCCACTCCAAGGCAGTGGACAAGATATGG...CTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR GCA 90 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGGTCCCCTCTACCTCCTaGTTGAATTCTTCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSRLSWNPQCSSLGQVPSTS*LNSSRS Trigger: GCTTCGGGAAGAATTCAAGCAGGAGGTAGAGGGGAC...CTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGGTCCCCTCTACCTCCTaGTTGAATTCTTCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSRLSWNPQCSSLGQPQVPSTS*LNSSRS Trigger: GCTTCGGGAAGAATTCAAGCAGGAGGTAGAGGGGAC...CTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCATGCTATCGCACTTaGTTGCAGCCAGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VIQAVLEPTVLFSGSASASCYRT*LQPAQM Trigger: CATCTGTGCTGGCTGCAACCAAGTGCGATAGCATGA...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCACCCTGGTTCCCATCTaGAAGCCTCTGTTTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHCHPGCPGTHSALLWVSTLVPI*KPLFAS Trigger: CGAAGCAAACAGAGGCTTCCAGATGGGAACCAGGGT...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCATCATCATTCGCATaGTCATACCTGACAACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VIQAVLEPTVLFSGSASASSSFA*SYLTTP Trigger: CGGGGTTGTCAGGTATGAGCATGCGAATGATGATGA...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | TGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCGATTCCAGGCCAGTTaGGGTCATCAACATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHPGCPGTHSALLWVSLSRFQAS*GHQHTG Trigger: TCCTGTATGTTGATGACCCCAACTGGCCTGGAATCG...GCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCGATTCCAGGCCAGTTaGGGTCATCAACATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHCHPGCPGTHSALLWVSRFQAS*GHQHTG Trigger: TCCTGTATGTTGATGACCCCAACTGGCCTGGAATCG...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| 3UTR CAA 72 bp | TGCTCTTCTCTGGGTCAGCCTCAGCCTCCTGAGTGTTaGATGGCAGGTATGAGCTGTCTGTCTTGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSLGQPQPPEC*MAGMSCLSWAL Trigger: CAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACACTCAGGAGGCTGAGGCTGACCCAGAGAAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCATTCCTGGAAAAACCTaGACACCACTACTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQAVLEPTVLFSGSASASIPGKT*TPLLEN Trigger: GTTCTCCAGTAGTGGTGTTCAGGTTTTTCCAGGAAT...GGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GACATGAGAAGCTGGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTGGGGAAGAACAGTGAGGCCACACTaGGGCACCAACTGTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DMRSWVCCACFQSSYWGRTVRPH*GTNCFN Trigger: GTTGAAACAGTTGGTGCCTCAGTGTGGCCTCACTGT...TCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR GCA 90 bp | CAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGAGGTCAATAACATACAGGAGCCCTaGTGTCCCCTCTACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCTGKHLVVAALLLREVNNIQEP*CPLYLL Trigger: CAGGAGGTAGAGGGGACAGCAGGGCTCCTGTATGTT...ATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| 3UTR CAA 72 bp | CAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTaGTTACGGGAGGTCAATGTGCGCAGCTTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCTGKHLVVAAL*LREVNVRSLSA Trigger: AGCTGATAAGCTGCGCACATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| 3UTR CAA 72 bp | CAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTaGTTGTTACGGGAGGTCAATGTGCGCAGCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: QQCTGKHLVVAA*LLREVNVRSLS Trigger: TGATAAGCTGCGCACATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSRLSWNPQCSSLGQLLKGF*PGSLCL Trigger: CAAACAGAGGCTTCCAGGTCAGAAGCCTTTTAAAAG...CTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTCATCATCACTTGCCATaGCAATGTAAATGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLSWNPQCSSLGQPQPPHHHLP*QCKCSS Trigger: AGAGCTGCATTTACATTGGCATGGCAAGTGATGATG...AGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGGAGTGCCTAGGGGTGTaGGAGGTGGTGTCACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLECLGV*EVVSPQ Trigger: CTGGGGTGACACCACCTCCCACACCCCTAGGCACTC...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCGGCTGCTCAGGGCTGTaGGCCTCTAGGTTGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PRPFFYSFCETRPHCHPGGCSGL*ASRLSC Trigger: GCATGACAACCTAGAGGCCCACAGCCCTGAGCAGCC...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| 3UTR CAA 72 bp | ATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTaGGAACTAGCCTATAGCAGTGGTAGGGCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MCAAYQLRGQTT*ELAYSSGRAVS Trigger: GGACACTGCCCTACCACTGCTATAGGCTAGTTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | TACGGGAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAAACAGTGAGGCCACACTaGGGCACCAACTGTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YGRSMCAAYQLRGQTTLETVRPH*GTNCFN Trigger: GTTGAAACAGTTGGTGCCTCAGTGTGGCCTCACTGT...TTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTCCCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GACATGAGAAGCTGGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTGGGGAAGAACTTCTTCCCTTCTGTaGAGCCTGGACTGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMRSWVCCACFQSSYWGRTSSLL*SLDWRK Trigger: TTTTCTCCAGTCCAGGCTTCACAGAAGGGAAGAAGT...TCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR TCA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGTCTGTCTGGCCGTaGGATCAGTGGCCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSMLSSCRLAIKSKHSSAQSVWP*DQWPWE Trigger: CTCCCAGGGCCACTGATCTCACGGCCAGACAGACTG...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGACCTGGTTCCCATCTGTaGATGGTCATCTTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTAVHREAFGGGSLVVTGPGSHL*MVIFLM Trigger: CATCAGGAAGATGACCATTCACAGATGGGAACCAGG...TCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCCCATGCCAATGTAAATaGAGCTCTTCATGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQAVLEPTVLFSGSASASPCQCK*SSSCFC Trigger: ACAAAAGCATGAAGAGCTGCATTTACATTGGCATGG...GGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGAGGTCAATTCATGCTATCGCACTTaGTTGCAGCCAGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QCTGKHLVVAALLLREVNSCYRT*LQPAQM Trigger: CATCTGTGCTGGCTGCAACCAAGTGCGATAGCATGA...ATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGAGGTCAATCATAGGTGTATTCTGTaGACTCCAGAGAGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCTGKHLVVAALLLREVNHRCIL*TPESLL Trigger: CAGCAGGCTCTCTGGAGTCCACAGAATACACCTATG...ATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGGAATGGTCATCTTCCTaGTGCTGGGCCTGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWEWSSS*CWAWFC Trigger: GCAGAACCAGGCCCAGCATCAGGAAGATGACCATTC...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR GCA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGAACATACAGGAGCCCTaGTGTCCCCTCTACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWNIQEP*CPLYLL Trigger: CAGGAGGTAGAGGGGACAGCAGGGCTCCTGTATGTT...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGAGGTCAATTCATCATCATTCGCATaGTCATACCTGACAACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCTGKHLVVAALLLREVNSSSFA*SYLTTP Trigger: CGGGGTTGTCAGGTATGAGCATGCGAATGATGATGA...ATTGACCTCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGAAGGCAACGTCCATCTaGTGCTGGGATCCAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: VNTAVHREAFGGGSLVVTKATSI*CWDPNI Trigger: TATGTTTGGATCCCAGCATCAGATGGACGTTGCCTT...CGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGCTGTCATCAGAGGGCTaGACCGAACACATGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWLSSEG*TEHMCH Trigger: ATGGCACATGTGTTCGGTTCAGCCCTCTGATGACAG...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGACTTCTTCCCTTCTGTaGAGCCTGGACTGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNTAVHREAFGGGSLVVTTSSLL*SLDWRK Trigger: TTTTCTCCAGTCCAGGCTTCACAGAAGGGAAGAAGT...CGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | GTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTCCATATCTTGTCCACTaGCTTGGAGTGGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLPSKVNTAVHREAFGGPYLVH*LGVALE Trigger: TTCCAGGGCCACTCCAAGGCAGTGGACAAGATATGG...ACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCTCCACTGCCTTGGAGTaGCCCTGGAATATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPFFYSFCETRPHCHPGSTALE*PWNILR Trigger: TCTGAGGATATTCCAGGGCCACTCCAAGGCAGTGGA...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACTAGCATTCCTGGAAAAACCTaGACACCACTACTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVNVRSLSAKGTDNLGTSIPGKT*TPLLEN Trigger: GTTCTCCAGTAGTGGTGTTCAGGTTTTTCCAGGAAT...GCTAGTTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGCATAGGTGTATTCTGTaGACTCCAGAGAGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWHRCIL*TPESLL Trigger: CAGCAGGCTCTCTGGAGTCCACAGAATACACCTATG...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| 3UTR CAA 72 bp | GCAACGCAGGCCCCAGCAAGCTCCAAGTCTGCTTGTTaGTGTAGTGCTAACAACATCTCAGGAAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATQAPASSKSAC*CSANNISGKCS Trigger: TGAACATTTTCCTGAGATGTTGTTAGCACTACACAAACAAGCAGACTTGGAGCTTGCTGGGGCCTGCGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR TCA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGAAGGGTAAGCCAAGCTaGTTACAAAGGTATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWKGKPS*LQRYWP Trigger: GGGCCAATACCTTTGTAATCAGCTTGGCTTACCCTT...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAATTTCCCGGGCTGTaGCTGCAATGGTCTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DSMLSSCRLAIKSKHSSAQFPGL*LQWSPL Trigger: TAGTGGAGACCATTGCAGTCACAGCCCGGGAAATTG...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGTGCAGTTCCAGCATTTaGAACAAGCAGCAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLCSSSI*NKQQGQ Trigger: CTGCCCTTGCTGCTTGTTGCAAATGCTGGAACTGCA...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | TACGGGAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACATCATCACTTGCCATaGCAATGTAAATGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGRSMCAAYQLRGQTTLEHHHLP*QCKCSS Trigger: AGAGCTGCATTTACATTGGCATGGCAAGTGATGATG...TTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTCCCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCAGCCTTGGAGTGGCCCTaGAATATCCTCAGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSMLSSCRLAIKSKHSSAALEWP*NILRYW Trigger: CCAGTATCTGAGGATATTCCAGGGCCACTCCAAGGC...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCCACAAGCATGGAGGAACTAAAAAGTCACATAACAGAAGGGCCTGGACATGCCTTGGAGTGGCCCTaGAATATCCTCAGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSMEELKSHITEGPGHALEWP*NILRYW Trigger: CCAGTATCTGAGGATATTCCAGGGCCACTCCAAGGC...ATGTCCAGGCCCTTCTGTTATGTGACTTTTTAGTTCCTCCATGCTTGTGGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR CCA 90 bp | GACATGAGAAGCTGGGTGTGCTGTGCATGCTTCCAGTCCTCGTACTGGGGAAGAGATCAGATTTCAAACTaGTGTCATCATCATTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DMRSWVCCACFQSSYWGRDQISN*CHHHSH Trigger: ATGCGAATGATGATGACACCAGTTTGAAATCTGATC...TCTTCCCCAGTACGAGGACTGGAAGCATGCACAGCACACCCAGCTTCTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGAAGGGTAAGCCAAGCTaGTTACAAAGGTATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLKGKPS*LQRYWP Trigger: GGGCCAATACCTTTGTAATCAGCTTGGCTTACCCTT...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGTCACAAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTCCATATCTTGTCCACTaGCTTGGAGTGGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQVTKQEIISHQQSQKRSPYLVH*LGVALE Trigger: TTCCAGGGCCACTCCAAGGCAGTGGACAAGATATGG...ACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTTGTGACTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCCTTTGGCCAGACAGGTTGAGGGCAGGATTTTACTAGACTTTCAAAGATCATGCTATCGCACTTaGTTGCAGCCAGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KEPLARQVEGRILLDFQRSCYRT*LQPAQM Trigger: CATCTGTGCTGGCTGCAACCAAGTGCGATAGCATGA...TCTTTGAAAGTCTAGTAAAATCCTGCCCTCAACCTGTCTGGCCAAAGGCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGTCACAAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTTGCAGTTCCAGCATTTaGAACAAGCAGCAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQVTKQEIISHQQSQKRSCSSSI*NKQQGQ Trigger: CTGCCCTTGCTGCTTGTTGCAAATGCTGGAACTGCA...ACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTTGTGACTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTAAATGCAGCTCTTCATaGTTTTGTACTCAGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VGLPSKVNTAVHREAFGGKCSSS*FCTQGL Trigger: TAGGCCCTGAGTACAAAAGCATGAAGAGCTGCATTT...ACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCACACCAGCAAAGCCAAAAGAGAAGTGTACAATGCAAAACGAAGCAAACATCCACTGCCTTGGAGTaGCCCTGGAATATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISHQQSQKRSVQCKTKQTSTALE*PWNILR Trigger: TCTGAGGATATTCCAGGGCCACTCCAAGGCAGTGGA...TGTTTGCTTCGTTTTGCATTGTACACTTCTCTTTTGGCTTTGCTGGTGTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCTCCCTCTCTTCCTCGTaGAAATATGCACATCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PRPFFYSFCETRPHCHPGSLSSS*KYAHPF Trigger: AAATGGATGTGCATATTTCCACGAGGAAGAGAGGGA...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCAAAAAGGCTTCTGACCTaGAAGCCTCTGTTTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSMLSSCRLAIKSKHSSAKRLLT*KPLFAS Trigger: CGAAGCAAACAGAGGCTTCCAGGTCAGAAGCCTTTT...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAGTCAAATCCAGCCCTACAGAAGGTACGAGAAGGAAAACACCAACACAAAAGGCAACGTCCATCTaGTGCTGGGATCCAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: NKVKSSPTEGTRRKTPTQKATSI*CWDPNI Trigger: TATGTTTGGATCCCAGCATCAGATGGACGTTGCCTT...TTGTGTTGGTGTTTTCCTTCTCGTACCTTCTGTAGGGCTGGATTTGACTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGACCTTTCTTTTATTCCTTTTGTGAGACAAGGCCTCACTGTCATCCAGGCTTTCTACGTCATCTTTaGTCAGTTTCTCGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRPFFYSFCETRPHCHPGFLRHL*SVSRER Trigger: CCTTTCTCGAGAAACTGATCAAAGATGACGTAGAAA...GCCTGGATGACAGTGAGGCCTTGTCTCACAAAAGGAATAAAAGAAAGGTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGAAATGCAGCTCTTCATaGTTTTGTACTCAGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLKCSSS*FCTQGL Trigger: TAGGCCCTGAGTACAAAAGCATGAAGAGCTGCATTT...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR GCA 90 bp | GTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTCCATGCCAATGTAAATaGAGCTCTTCATGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLPSKVNTAVHREAFGGPCQCK*SSSCFC Trigger: ACAAAAGCATGAAGAGCTGCATTTACATTGGCATGG...ACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGATGGCAGGTATGAGCTGTCTGTCTTGGGCACTGTGAACTCTTTTATGTCCCTCTCTTCCTCGTaGAAATATGCACATCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VFDGRYELSVLGTVNSFMSLSSS*KYAHPF Trigger: AAATGGATGTGCATATTTCCACGAGGAAGAGAGGGA...CATAAAAGAGTTCACAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGCCAGACAGGTTGAGGGCAGGATTTTACTAGACTTTCAAAGAAGAGCTTCCCTCTCTTCCTCGTaGAAATATGCACATCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLARQVEGRILLDFQRRASLSSS*KYAHPF Trigger: AAATGGATGTGCATATTTCCACGAGGAAGAGAGGGA...AGCTCTTCTTTGAAAGTCTAGTAAAATCCTGCCCTCAACCTGTCTGGCCAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACTAGCCTATAGCGATCAGATTTCAAACTaGTGTCATCATCATTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCAAYQLRGQTTLELAYSDQISN*CHHHSH Trigger: ATGCGAATGATGATGACACCAGTTTGAAATCTGATC...GCTATAGGCTAGTTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGTTTCTACGTCATCTTTaGTCAGTTTCTCGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLFLRHL*SVSRER Trigger: CCTTTCTCGAGAAACTGATCAAAGATGACGTAGAAA...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGACATAACCAACTTAGGGCTGACAGCAATAAACTAGAAACAAAGAATCAAAAGGGTAAGCCAAGCTaGTTACAAAGGTATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRHNQLRADSNKLETKNQKGKPS*LQRYWP Trigger: GGGCCAATACCTTTGTAATCAGCTTGGCTTACCCTT...TTGATTCTTTGTTTCTAGTTTATTGCTGTCAGCCCTAAGTTGGTTATGTCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTGTACAATGCAATTTCTACGTCATCTTTaGTCAGTTTCTCGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGNNLTPAKPKEKCTMQFLRHL*SVSRER Trigger: CCTTTCTCGAGAAACTGATCAAAGATGACGTAGAAA...TTGCATTGTACACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS GCA 90 bp | AGGGCCTCAGTCTGTCTGGCCGTGAGATCAGTGGCCCTGGGAGGCTaGTCAGGGCTGTGGGCCTCTAGGTTGTCATGCTCTAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RASVCLAVRSVALGG*SGLWASRLSCSSPL Trigger: CAGTGGGCTAGAGCATGACAACCTAGAGGCCCACAGCCCTGAGCAGCCTCCCAGGGCCACTGATCTCACGGCCAGACAGACTGAGGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS-3UTR CAA 90 bp | GTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTGCTATCGCACTTGGTaGCAGCCAGCACAGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIQAVLEPTVLFSGSASACYRTW*QPAQMR Trigger: CCTCATCTGTGCTGGCTGCAACCAAGTGCGATAGCA...GGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCGAAGCCGCTCCTCATTaGCCTTCTGTAGCTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: IQAVLEPTVLFSGSASASEAAPH*PSVAEP Trigger: AGGTTCAGCTACAGAAGGCAAATGAGGAGCGGCTTC...GGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS GCA 90 bp | TCTCTGCACCCTGGTTCCCATCTGGAAGCCTCTGTTTGCTTCGAGTaGCTAGGGGTGTGGGAGGTGGTGTCACCCCAGTACCTTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHPGSHLEASVCFE*LGVWEVVSPQYLVL Trigger: AAGTACAAGGTACTGGGGTGACACCACCTCCCACACCCCTAGGCACTCGAAGCAAACAGAGGCTTCCAGATGGGAACCAGGGTGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCGATGCTCACCATATCTaGTCCACTGCCTTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHCHPGCPGTHSALLWVSDAHHI*STALEW Trigger: CCACTCCAAGGCAGTGGACAAGATATGGTGAGCATC...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCCGATTCCAGGCCAGTaGGGGTCATCAACATACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSRLSWNPQCSSLGQPPIPGQ*GSSTYR Trigger: CCTGTATGTTGATGACCCCAACTGGCCTGGAATCGG...AGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCGAAGCCGCTCCTCATTaGCCTTCTGTAGCTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PHCHPGCPGTHSALLWVSEAAPH*PSVAEP Trigger: AGGTTCAGCTACAGAAGGCAAATGAGGAGCGGCTTC...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS CCA 90 bp | GCTTCTGACCTGGAAGCCTCTGTTTGCTTCGAGTGCCTAGGGGTGTaGGAGGTGGTGTCACCCCAGTACCTTGTACTTTGTGGACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASDLEASVCFECLGV*EVVSPQYLVLCGHR Trigger: CCTATGTCCACAAAGTACAAGGTACTGGGGTGACACCACCTCCCACACCCCTAGGCACTCGAAGCAAACAGAGGCTTCCAGGTCAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS CCA 90 bp | GGTTCCCATCTGGAAGCCTCTGTTTGCTTCGAGTGCCTAGGGGTGTaGGAGGTGGTGTCACCCCAGTACCTTGTACTTTGTGGACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSHLEASVCFECLGV*EVVSPQYLVLCGHR Trigger: CCTATGTCCACAAAGTACAAGGTACTGGGGTGACACCACCTCCCACACCCCTAGGCACTCGAAGCAAACAGAGGCTTCCAGATGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGTTGCTCTCCAATATTTaGGATTCGGGTGCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSRLSWNPQCSSLGQPQLLSNI*DSGALG Trigger: CCCCAGAGCACCCGAATCCAAAATATTGGAGAGCAA...CTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCTGCTGCAGGTGCTATGTaGGATACAGGAACAGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRLSWNPQCSSLGQPQPPAAGAM*DTGTAL Trigger: TAAAGCTGTTCCTGTATCCAACATAGCACCTGCAGC...AGGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS GCA 90 bp | CTGAGGCACCAACTGTTTCAACTGTTCACCCAACCAGCGGTTCAGTaGATCACAGGAGTGTCTTTCCCGGCCAACTGCTGCAGGTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LRHQLFQLFTQPAVQ*ITGVSFPANCCRCY Trigger: ATAGCACCTGCAGCAGTTGGCCGGGAAAGACACTCCTGTGATGCACTGAACCGCTGGTTGGGTGAACAGTTGAAACAGTTGGTGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS GCA 90 bp | TTGGGGTCATCAACATACAGGAGCCCTGCTGTCCCCTCTACCTCCTaGTTGAATTCTTCCCGAAGCTGTAGTGTGCAGGTCAGGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGSSTYRSPAVPSTS*LNSSRSCSVQVRTG Trigger: ACCAGTCCTGACCTGCACACTACAGCTTCGGGAAGAATTCAAGCAGGAGGTAGAGGGGACAGCAGGGCTCCTGTATGTTGATGACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | AACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGGATGCTATCGCACTTGGTaGCAGCCAGCACAGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTAVHREAFGGGSLVVTGCYRTW*QPAQMR Trigger: CCTCATCTGTGCTGGCTGCAACCAAGTGCGATAGCA...TCCCGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACTGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCGTCAGGACTGGTAGTTaGCTTTGGATGCAGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PHCHPGCPGTHSALLWVSVRTGS*LWMQVM Trigger: CATTACCTGCATCCAAAGCAAACTACCAGTCCTGAC...GCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACAGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCTGTTCTCTAGAAGCCTaGAGTTCTCCTCAATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGCPGTHSALLWVSLSLCSLEA*SSPQFP Trigger: GGGAAATTGAGGAGAACTCAAGGCTTCTAGAGAACA...GAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCCTCCCAGCTCTTCATGCTTTaGTACTCAGGGCCTATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: IQAVLEPTVLFSGSASASQLFML*YSGPIL Trigger: TAAAATAGGCCCTGAGTACAAAAGCATGAAGAGCTG...GGAGGCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGATCTTGTCCACTGCCTaGGAGTGGCCCTGGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: VNTAVHREAFGGGSLVVTILSTA*EWPWNI Trigger: GATATTCCAGGGCCACTCCAAGGCAGTGGACAAGAT...CGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TGTCATCCAGGCTGTCCTGGAACCCACAGTGCTCTTCTCTGGGTCAGCCTCAGCTCTTCCACCAAGATTTaGATGTGGTCCACTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHPGCPGTHSALLWVSLSSSTKI*MWSTFF Trigger: GAAGAAAGTGGACCACATCAAAATCTTGGTGGAAGA...GCTGAGGCTGACCCAGAGAAGAGCACTGTGGGTTCCAGGACAGCCTGGATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS TCA 90 bp | GTGCAGGTCAGGACTGGTAGTTTGCTTTGGATGCAGGTAATGAGCTaGTCGACATCCTCTCCTCGAGTTCCTAACCCTTCTGCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VQVRTGSLLWMQVMS*STSSPRVPNPSAVI Trigger: GATGACAGCAGAAGGGTTAGGAACTCGAGGAGAGGATGTCGATCAGCTCATTACCTGCATCCAAAGCAAACTACCAGTCCTGACCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGCCGATTCCAGGCCAGTaGGGGTCATCAACATACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLAIKSKHSSAQGSIWWPIPGQ*GSSTYR Trigger: CCTGTATGTTGATGACCCCAACTGGCCTGGAATCGG...CCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTGGCAGCCTTGTTGTTACGGTCAGGACTGGTAGTTaGCTTTGGATGCAGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VNTAVHREAFGGGSLVVTVRTGS*LWMQVM Trigger: CATTACCTGCATCCAAAGCAAACTACCAGTCCTGAC...CGTAACAACAAGGCTGCCACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TACGGGAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACGTCCACATCATCACTaGCCATGCCAATGTAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: YGRSMCAAYQLRGQTTLERPHHH*PCQCKC Trigger: GCATTTACATTGGCATGGCAAGTGATGATGTGGACG...TTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTCCCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAGTTTAAAGGCCAGCCTGGTCTACCACAGTCAGTCCCTGTCTCAAAAATCCTACTACAGGGATTaGCCGCAACACTCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQSLKASLVYHSQSLSQKSYYRD*PQHSLF Trigger: GAAGAGGGAGTGTTGCGGCAAATCCCTGTAGTAGGA...TTTTTGAGACAGGGACTGACTGTGGTAGACCAGGCTGGCCTTTAAACTTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
||
| CDS TCA 90 bp | TCATGTTCTCTAGAAGCCTTGAGTTCTCCTCAATTTCCCGGGCTGTaGCTGCAATGGTCTCCACTAGCTCAGAAACGTCCACATCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SCSLEALSSPQFPGL*LQWSPLAQKRPHHH Trigger: GTGATGATGTGGACGTTTCTGAGCTAGTGGAGACCATTGCAGTCACAGCCCGGGAAATTGAGGAGAACTCAAGGCTTCTAGAGAACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGCCAGACAGGTTGAGGGCAGGATTTTACTAGACTTTCAAAGAAGAGCTGATGCTCACCATATCTaGTCCACTGCCTTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLARQVEGRILLDFQRRADAHHI*STALEW Trigger: CCACTCCAAGGCAGTGGACAAGATATGGTGAGCATC...AGCTCTTCTTTGAAAGTCTAGTAAAATCCTGCCCTCAACCTGTCTGGCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAATGTGCGCAGCTTATCAGCTAAGGGGACAGACAACCTTGGAACTAGCTGTTCTCTAGAAGCCTaGAGTTCTCCTCAATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVNVRSLSAKGTDNLGTSCSLEA*SSPQFP Trigger: GGGAAATTGAGGAGAACTCAAGGCTTCTAGAGAACA...GCTAGTTCCAAGGTTGTCTGTCCCCTTAGCTGATAAGCTGCGCACATTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGATGGCAGGTATGAGCTGTCTGTCTTGGGCACTGTGAACTCTTTTATGTCCTACTACAGGGATTaGCCGCAACACTCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFDGRYELSVLGTVNSFMSYYRD*PQHSLF Trigger: GAAGAGGGAGTGTTGCGGCAAATCCCTGTAGTAGGA...CATAAAAGAGTTCACAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCAATCTTGTCCACTGCCTaGGAGTGGCCCTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: DSMLSSCRLAIKSKHSSAILSTA*EWPWNI Trigger: GATATTCCAGGGCCACTCCAAGGCAGTGGACAAGAT...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGGTATTCTGTGTAACCATGAGGAATTCAGGCTTTAGTCAGACCTACCTGTTGCTCTCCAATATTTaGGATTCGGGTGCTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: AVVFCVTMRNSGFSQTYLLLSNI*DSGALG Trigger: CCCCAGAGCACCCGAATCCAAAATATTGGAGAGCAA...CAGGTAGGTCTGACTAAAGCCTGAATTCCTCATGGTTACACAGAATACCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS GCA 90 bp | CAATGGTCTCCACTAGCTCAGAAACGTCCACATCATCACTTGCCATaGCAATGTAAATGCAGCTCTTCATGCTTTTGTACTCAGGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: QWSPLAQKRPHHHLP*QCKCSSSCFCTQGL Trigger: TAGGCCCTGAGTACAAAAGCATGAAGAGCTGCATTTACATTGGCATGGCAAGTGATGATGTGGACGTTTCTGAGCTAGTGGAGACCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | AGTTCCACAAGCATGGAGGAACTAAAAAGTCACATAACAGAAGGGCCTGGACATTTGCTCTCCAATATTTaGGATTCGGGTGCTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SSTSMEELKSHITEGPGHLLSNI*DSGALG Trigger: CCCCAGAGCACCCGAATCCAAAATATTGGAGAGCAA...ATGTCCAGGCCCTTCTGTTATGTGACTTTTTAGTTCCTCCATGCTTGTGGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| CDS-3UTR CAA 90 bp | GTGTTTGATGGCAGGTATGAGCTGTCTGTCTTGGGCACTGTGAACTCTTTTATGGCTGCAGGTGCTATGTaGGATACAGGAACAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: VFDGRYELSVLGTVNSFMAAGAM*DTGTAL Trigger: TAAAGCTGTTCCTGTATCCAACATAGCACCTGCAGC...CATAAAAGAGTTCACAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | ATCTCACACCAGCAAAGCCAAAAGAGAAGTGTACAATGCAAAACGAAGCAAACAATCTTGTCCACTGCCTaGGAGTGGCCCTGGAATATC | + |
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Preference number: 5 (lower is better) Translates to: ISHQQSQKRSVQCKTKQTILSTA*EWPWNI Trigger: GATATTCCAGGGCCACTCCAAGGCAGTGGACAAGAT...TGTTTGCTTCGTTTTGCATTGTACACTTCTCTTTTGGCTTTGCTGGTGTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| CDS-3UTR CAA 90 bp | TCCCAAAGTTTAAAGGCCAGCCTGGTCTACCACAGTCAGTCCCTGTCTCAAAAATCTTCCACCAAGATTTaGATGTGGTCCACTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SQSLKASLVYHSQSLSQKSSTKI*MWSTFF Trigger: GAAGAAAGTGGACCACATCAAAATCTTGGTGGAAGA...TTTTTGAGACAGGGACTGACTGTGGTAGACCAGGCTGGCCTTTAAACTTTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS-3UTR CAA 90 bp | GTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACAGGGAAGCATTTGGTGGTCAGCTCTTCATGCTTTaGTACTCAGGGCCTATTTTA | + |
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Preference number: 5 (lower is better) Translates to: VGLPSKVNTAVHREAFGGQLFML*YSGPIL Trigger: TAAAATAGGCCCTGAGTACAAAAGCATGAAGAGCTG...ACCACCAAATGCTTCCCTGTGCACTGCTGTGTTTACTTTTGATGGCAAGCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | GACAGCATGTTGTCTTCTTGTAGGCTTGCCATCAAAAGTAAACACAGCAGTGCACGTCCACATCATCACTaGCCATGCCAATGTAAATGC | + |
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Preference number: 5 (lower is better) Translates to: DSMLSSCRLAIKSKHSSARPHHH*PCQCKC Trigger: GCATTTACATTGGCATGGCAAGTGATGATGTGGACG...TGCACTGCTGTGTTTACTTTTGATGGCAAGCCTACAAGAAGACAACATGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS-3UTR CAA 90 bp | TCAGTCACCCTGATACCCAAACTACACAAGAATTCATCAGAAAAAGAGAATTACTGCTATCGCACTTGGTaGCAGCCAGCACAGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SVTLIPKLHKNSSEKENYCYRTW*QPAQMR Trigger: CCTCATCTGTGCTGGCTGCAACCAAGTGCGATAGCA...GTAATTCTCTTTTTCTGATGAATTCTTGTGTAGTTTGGGTATCAGGGTGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| CDS-3UTR CAA 90 bp | CTGCAAGTCACAAAGCAGGAAATAATCTCACACCAGCAAAGCCAAAAGAGAAGTGAGAAACCCAAGATTTaGATGTGGTCCACTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LQVTKQEIISHQQSQKRSEKPKI*MWSTFF Trigger: GAAGAAAGTGGACCACATCAAAATCTTGGGTTTCTC...ACTTCTCTTTTGGCTTTGCTGGTGTGAGATTATTTCCTGCTTTGTGACTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115802.2 |
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| CDS GCA 72 bp | GTCTGTCTGGCCGTGAGATCAGTGGCCCTGGGAGGCTaGTCAGGGCTGTGGGCCTCTAGGTTGTCATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VCLAVRSVALGG*SGLWASRLSCS Trigger: AGAGCATGACAACCTAGAGGCCCACAGCCCTGAGCAGCCTCCCAGGGCCACTGATCTCACGGCCAGACAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS CCA 72 bp | GTGAGATCAGTGGCCCTGGGAGGCTGCTCAGGGCTGTaGGCCTCTAGGTTGTCATGCTCTAGCCCACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VRSVALGGCSGL*ASRLSCSSPLD Trigger: GTCCAGTGGGCTAGAGCATGACAACCTAGAGGCCCACAGCCCTGAGCAGCCTCCCAGGGCCACTGATCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS CAA 72 bp | GTCTCTGCACCCTGGTTCCCATCTGGAAGCCTCTGTTaGCTTCGAGTGCCTAGGGGTGTGGGAGGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSAPWFPSGSLC*LRVPRGVGGGV Trigger: GACACCACCTCCCACACCCCTAGGCACTCGAAGCAAACAGAGGCTTCCAGATGGGAACCAGGGTGCAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115804.9 |
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| CDS CAA 72 bp | GCATGCTCATACCTGACAACCCCGATTCCAGGCCAGTaGGGGTCATCAACATACAGGAGCCCTGCTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ACSYLTTPIPGQ*GSSTYRSPAVP Trigger: GGGGACAGCAGGGCTCCTGTATGTTGATGACCCCAACTGGCCTGGAATCGGGGTTGTCAGGTATGAGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CCA 72 bp | CTGGAAGCCTCTGTTTGCTTCGAGTGCCTAGGGGTGTaGGAGGTGGTGTCACCCCAGTACCTTGTACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LEASVCFECLGV*EVVSPQYLVLC Trigger: ACAAAGTACAAGGTACTGGGGTGACACCACCTCCCACACCCCTAGGCACTCGAAGCAAACAGAGGCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 90 bp | GGGTCATCAACATACAGGAGCCCTGCTGTCCCCTCTACCTCCTGCTaGAATTCTTCCCGAAGCTGTAGTGTGCAGGTCAGGACTGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GSSTYRSPAVPSTSC*NSSRSCSVQVRTGS Trigger: ACTACCAGTCCTGACCTGCACACTACAGCTTCGGGAAGAATTCAAGCAGGAGGTAGAGGGGACAGCAGGGCTCCTGTATGTTGATGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 90 bp | CAGGGATTTGCCGCAACACTCCCTCTTCCAGAAGCCGCTCCTCATTaGCCTTCTGTAGCTGAACCTGTGCCTCCTGAATTCCCTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: QGFAATLPLPEAAPH*PSVAEPVPPEFPSE Trigger: TTCGGAAGGGAATTCAGGAGGCACAGGTTCAGCTACAGAAGGCAAATGAGGAGCGGCTTCTGGAAGAGGGAGTGTTGCGGCAAATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS TCA 72 bp | GCATCCGAGCCTCTCAGGGACCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGTTTGCTTCGAGTGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: ASEPLRDLLKGF*PGSLCLLRVPR Trigger: CCTAGGCACTCGAAGCAAACAGAGGCTTCCAGGTCAGAAGCCTTTTAAAAGGTCCCTGAGAGGCTCGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS GCA 72 bp | TCAACATACAGGAGCCCTGCTGTCCCCTCTACCTCCTaGTTGAATTCTTCCCGAAGCTGTAGTGTGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: STYRSPAVPSTS*LNSSRSCSVQV Trigger: GACCTGCACACTACAGCTTCGGGAAGAATTCAAGCAGGAGGTAGAGGGGACAGCAGGGCTCCTGTATGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS TCA 72 bp | CTCGAGTTCCTAACCCTTCTGCTGTCATCAGAGGGCTaGACCGAACACATGTGCCATCTACCTCCAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LEFLTLLLSSEG*TEHMCHLPPGL Trigger: TAGACCTGGAGGTAGATGGCACATGTGTTCGGTTCAGCCCTCTGATGACAGCAGAAGGGTTAGGAACTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 72 bp | AGAAAACCAATTCAGCACGGATCCTACTACAGGGATTaGCCGCAACACTCCCTCTTCCAGAAGCCGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RKPIQHGSYYRD*PQHSLFQKPLL Trigger: GAGGAGCGGCTTCTGGAAGAGGGAGTGTTGCGGCAAATCCCTGTAGTAGGATCCGTGCTGAATTGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS TCA 72 bp | CTAGAAGCCTTGAGTTCTCCTCAATTTCCCGGGCTGTaGCTGCAATGGTCTCCACTAGCTCAGAAACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LEALSSPQFPGL*LQWSPLAQKRP Trigger: TGGACGTTTCTGAGCTAGTGGAGACCATTGCAGTCACAGCCCGGGAAATTGAGGAGAACTCAAGGCTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS TCA 72 bp | CTAAACCTTAAGTCTCTGCACCCTGGTTCCCATCTGTaGATGGTCATCTTCCTGATGCTGGGCCTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LNLKSLHPGSHL*MVIFLMLGLVL Trigger: CAGAACCAGGCCCAGCATCAGGAAGATGACCATTCACAGATGGGAACCAGGGTGCAGAGACTTAAGGTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023361.12 |
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| CDS GCA 72 bp | GTTCAGTGCATCACAGGAGTGTCTTTCCCGGCCAACTaGTGCAGGTGCTATGTTGGATACAGGAACAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VQCITGVSFPAN*CRCYVGYRNSF Trigger: AAAGCTGTTCCTGTATCCAACATAGCACCTGCAGCAGTTGGCCGGGAAAGACACTCCTGTGATGCACTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 90 bp | GCATCACAGGAGTGTCTTTCCCGGCCAACTGCTGCAGGTGCTATGTaGGATACAGGAACAGCTTTAAACGCTGAATCTGAGGCTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: ASQECLSRPTAAGAM*DTGTALNAESEAGN Trigger: ATTACCAGCCTCAGATTCAGCGTTTAAAGCTGTTCCTGTATCCAACATAGCACCTGCAGCAGTTGGCCGGGAAAGACACTCCTGTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 72 bp | GAGTGTCTTTCCCGGCCAACTGCTGCAGGTGCTATGTaGGATACAGGAACAGCTTTAAACGCTGAATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ECLSRPTAAGAM*DTGTALNAESE Trigger: CTCAGATTCAGCGTTTAAAGCTGTTCCTGTATCCAACATAGCACCTGCAGCAGTTGGCCGGGAAAGACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS TCA 72 bp | AGGACTGGTAGTTTGCTTTGGATGCAGGTAATGAGCTaGTCGACATCCTCTCCTCGAGTTCCTAACCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RTGSLLWMQVMS*STSSPRVPNPS Trigger: AGAAGGGTTAGGAACTCGAGGAGAGGATGTCGATCAGCTCATTACCTGCATCCAAAGCAAACTACCAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS CAA 72 bp | TGGTCTCCACTAGCTCAGAAACGTCCACATCATCACTaGCCATGCCAATGTAAATGCAGCTCTTCATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: WSPLAQKRPHHH*PCQCKCSSSCF Trigger: AAAGCATGAAGAGCTGCATTTACATTGGCATGGCAAGTGATGATGTGGACGTTTCTGAGCTAGTGGAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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| CDS GCA 72 bp | CCACTAGCTCAGAAACGTCCACATCATCACTTGCCATaGCAATGTAAATGCAGCTCTTCATGCTTTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: PLAQKRPHHHLP*QCKCSSSCFCT Trigger: AGTACAAAAGCATGAAGAGCTGCATTTACATTGGCATGGCAAGTGATGATGTGGACGTTTCTGAGCTAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023361.12 ENSMUST00000115804.9 |
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