Pregenerated sensors for PDSS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038240Ensembl transcript IDs: ENSMUST00000095725.11, ENSMUST00000159139.8, ENSMUST00000160823.8, ENSMUST00000162008.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCTTCGCTCGACACCTGCAGCTTCCAGCTTGCTCTGTCCTCTGTaGAAGGAAAACCACAGCCACCGCCCTGGCGCCATCCCGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VLRSTPAASSLLCPL*KENHSHRPGAIPGL Trigger: CAAGCCCGGGATGGCGCCAGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR GCA 90 bp | AGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCAGCTTCCAGCTTaGTCTGTCCTCTGTGGAAGGAAAACCACAGCCACCGCCCTGGCG | + |
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Preference number: 1 (lower is better) Translates to: RAGIQCFARHLQLPA*SVLCGRKTTATALA Trigger: CGCCAGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR GCA 90 bp | TTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTaGAGCTTCCAGCTTGCTCTGTCCTCTGTGGAAGGAAAACCACAG | + |
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Preference number: 1 (lower is better) Translates to: LMCPPELASSASLDT*SFQLALSSVEGKPQ Trigger: CTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR GCA 90 bp | AGACTGGTCATTGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTaGTTCGCTCGACACCTGCAGCTTCCAGCTTGCTCTGTCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RLVIGVDVSPRAGIQ*FARHLQLPACSVLC Trigger: ACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR TCA 90 bp | CAGCTGCCATCTGGCCCAGGTAGGTCTCTGTCCCTAACTGTCTCCTaGGAGAGGGTGTATATGCTTATGGCTCAGGGCTTGGCAACACAG | + |
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Preference number: 1 (lower is better) Translates to: QLPSGPGRSLSLTVS*ERVYMLMAQGLATQ Trigger: CTGTGTTGCCAAGCCCTGAGCCATAAGCATATACACCCTCTCTCAGGAGACAGTTAGGGACAGAGACCTACCTGGGCCAGATGGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CCA 90 bp | CAGCTTGCTCTGTCCTCTGTGGAAGGAAAACCACAGCCACCGCCCTaGCGCCATCCCGGGCTTGGTCCAATCAATAAGGACTTATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QLALSSVEGKPQPPP*RHPGLGPINKDLFP Trigger: AGGAAATAAGTCCTTATTGATTGGACCAAGCCCGGGATGGCGCCAGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR GCA 90 bp | AGCCTCCTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTaGTTGCTCTTCTCTGAACTTCCTACACACATGCTTTTCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLLSTVVTGVHHHTR*LLFSELPTHMLFQL Trigger: CAGCTGGAAAAGCATGTGTGTAGGAAGTTCAGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAGGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CCA 90 bp | GCCGTCTCTCCAGCCCAAGACAGGTTCTTGATACTTAGTCTAGGCTaGCCTCTAAGAATCCTCTCCCTCTATCTCCTGAGTGCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: AVSPAQDRFLILSLG*PLRILSLYLLSAGI Trigger: AATCCCAGCACTCAGGAGATAGAGGGAGAGGATTCTTAGAGGCCAGCCTAGACTAAGTATCAAGAACCTGTCTTGGGCTGGAGAGACGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR GCA 90 bp | CAGCTGTGTCACTTTTCATGGCTTTCCTTTCTGGGAAGCATCCATTaGCATCTTCATAAGCAAGCCCTTCTTGAGGAGCTGTACGGCACG | + |
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Preference number: 1 (lower is better) Translates to: QLCHFSWLSFLGSIH*HLHKQALLEELYGT Trigger: CGTGCCGTACAGCTCCTCAAGAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATGAAAAGTGACACAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR TCA 90 bp | TGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTCTCTaGACTTCCTACACACATGCTTTTCCAGCTGTGTCACTTTTCATG | + |
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Preference number: 1 (lower is better) Translates to: CGYRCAPPHQVLALL*TSYTHAFPAVSLFM Trigger: CATGAAAAGTGACACAGCTGGAAAAGCATGTGTGTAGGAAGTTCAGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CCA 90 bp | CCGGCTAGCCTTGACCTCACAGAGATCCGTTTGCTTCTTGCCTCTTaGGTGCTGGAATTAAACATACAGTTGATCACATCTGGCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: PASLDLTEIRLLLAS*VLELNIQLITSGYA Trigger: TGCATAGCCAGATGTGATCAACTGTATGTTTAATTCCAGCACCCAAGAGGCAAGAAGCAAACGGATCTCTGTGAGGTCAAGGCTAGCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR TCA 90 bp | GCAGAGCCCGATTCAAAACTCCCAAGGTACTCTTCAAACTGCTGCTaGACAGGTTCTAAGAGGAAGCAATCTTCTTGCTTCTGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: AEPDSKLPRYSSNCC*TGSKRKQSSCFCDQ Trigger: CTGGTCACAGAAGCAAGAAGATTGCTTCCTCTTAGAACCTGTTCAGCAGCAGTTTGAAGAGTACCTTGGGAGTTTTGAATCGGGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CCA 90 bp | CAAACTAGTGCAGGCATGATGGCATATACATGTATACCCAACATGTaGGATCAAGAATTCAAGATCACTTCCAGAGCCAGCCTGGGATCC | + |
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Preference number: 1 (lower is better) Translates to: QTSAGMMAYTCIPNM*DQEFKITSRASLGS Trigger: GGATCCCAGGCTGGCTCTGGAAGTGATCTTGAATTCTTGATCCCACATGTTGGGTATACATGTATATGCCATCATGCCTGCACTAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CCA 90 bp | CACACATGCTTTTCCAGCTGTGTCACTTTTCATGGCTTTCCTTTCTaGGAAGCATCCATTGCCATCTTCATAAGCAAGCCCTTCTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: HTCFSSCVTFHGFPF*EASIAIFISKPFLR Trigger: CCTCAAGAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATGAAAAGTGACACAGCTGGAAAAGCATGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR TCA 90 bp | CAGAAGAAAGCAATAGGTCCCTTAGGACTGGAGTTACAATGGTTATaGACTAACATATGGGTGCTGGGAATTGAACCCAGGTCCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QKKAIGPLGLELQWL*TNIWVLGIEPRSSG Trigger: TCCAGAGGACCTGGGTTCAATTCCCAGCACCCATATGTTAGTTCATAACCATTGTAACTCCAGTCCTAAGGGACCTATTGCTTTCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR TCA 90 bp | ATTATTTCTGTTGCTGAAGCCTCAAGTGTGCTCTGGCGTGACAAGTaGAAACCGCGTGACCTTTTTCCTTCTCGTTTTGTTTGTAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: IISVAEASSVLWRDK*KPRDLFPSRFVCSG Trigger: ACCACTACAAACAAAACGAGAAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTTCAGCAACAGAAATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| 3UTR TCA 90 bp | AGGTATTGCATGGTTATGACAGTGTCAGAACGTGGCGAGCCTAAGTaGCATGTCAGTACTTTCAGGGATAGCCGAGATTTTAATCATGAT | + |
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Preference number: 1 (lower is better) Translates to: RYCMVMTVSERGEPK*HVSTFRDSRDFNHD Trigger: ATCATGATTAAAATCTCGGCTATCCCTGAAAGTACTGACATGTCACTTAGGCTCGCCACGTTCTGACACTGTCATAACCATGCAATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR GCA 90 bp | CAGCTAATGAGTGCTCCTAATGTGTACCTCTTCCATTTAAGAAACTaGATGTATCATTTTAATGCACAGCAGACTTATCTGGCAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: QLMSAPNVYLFHLRN*MYHFNAQQTYLAAF Trigger: AAAGGCTGCCAGATAAGTCTGCTGTGCATTAAAATGATACATGCAGTTTCTTAAATGGAAGAGGTACACATTAGGAGCACTCATTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGTGTGGTGCTGGGGAATaGACCCAGGGCCTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWCGAGE*TQGLGY Trigger: GTACCCCAGGCCCTGGGTTCATTCCCCAGCACCACA...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGAGCTCCTGGATGCCCTaGGAGTCAGAGCGCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWSSWMP*ESERCS Trigger: ACTGCAGCGCTCTGACTCTCAGGGCATCCAGGAGCT...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCATCCAGTGCTTCGCTCGACACCTGCAGCTTCCAGCTTGCTCTGTCCTCCTGAAGCCTCAAGTGTaGTCTGGCGTGACAAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: AGIQCFARHLQLPACSVLLKPQV*SGVTSE Trigger: TTCACTTGTCACGCCAGAGCACACTTGAGGCTTCAG...GAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTAATGAACCCAGGGCCTaGGGTACAGTGCTAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PPEHCGYRCAPPHQVLALNEPRA*GTVLGK Trigger: CTTGCCTAGCACTGTACCCCAGGCCCTGGGTTCATT...AAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCAGGTCCGCCTCATTCTCTaGGTTTTTCAGCTAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GVDVSPRAGIQCFARHLQVRLIL*VFQLRN Trigger: GTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGAC...CTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGCTTCCAGAGCCAGCCTaGGATCCATCAGACCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWLPEPA*DPSDPV Trigger: GACAGGGTCTGATGGATCCCAGGCTGGCTCTGGAAG...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTaGCTGGCTGGTGTGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: ASNSQDVDLPLPPSTGFKAMPHH*LAGVMS Trigger: ACTCATCACACCAGCCAGGCAGTGGTGGGGCATGGC...TTTAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGAGTTTTCTGTGGTGCTaGGGAATGAACCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWSFLWC*GMNPGP Trigger: AGGCCCTGGGTTCATTCCCCAGCACCACAGAAAACT...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTCTCTCCAATTTCTTTCCTCTaGCTACTTCCCTTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSTVVTGVHHHTRCLLFSPISFL*LLPFLW Trigger: CCAGAGGAAGGGAAGTAGGCAGAGGAAAGAAATTGG...AGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTCTCTCATGGCTTTCCTTTCTaGGAAGCATCCATTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: LSTVVTGVHHHTRCLLFSHGFPF*EASIAI Trigger: GATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATG...AGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGGCTGGAAAGATGGCTCAGCGATTAGGAGCACTGAGTTCAATTCCCAGCAGCGCTGCAGTTCTCTaGAGGATACACTCTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGAGKMAQRLGALSSIPSSAAVL*RIHSLS Trigger: TGAAAGAGAGTGTATCCTTCAGAGAACTGCAGCGCT...GCTGGGAATTGAACTCAGTGCTCCTAATCGCTGAGCCATCTTTCCAGCCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCAAGATCACTTCCAGAGCCAGCCTGGGATCCATCAGACCCTGTCTCAGCGTCTTCAGGTGACTTATaGTGGCAGCAGAAAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: NSRSLPEPAWDPSDPVSASSGDL*WQQKTS Trigger: GCTAGTTTTCTGCTGCCATCATAAGTCACCTGAAGA...CGCTGAGACAGGGTCTGATGGATCCCAGGCTGGCTCTGGAAGTGATCTTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACATGTCTTCTTAACCTCTaGGCCAGCCGTCTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TLSPCNPYTLVVAIYLETCLLNL*ASRLSS Trigger: GCTGGAGAGACGGCTGGCTCAGAGGTTAAGAAGACA...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACACAGTACACACTCAGCTaGCATCTGGCCCAGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TLSPCNPYTLVVAIYLETQYTLS*HLAQVG Trigger: ACCTACCTGGGCCAGATGGCAGCTGAGTGTGTACTG...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGCTTTCCTTTCTGGGAAGCATCCATTGCCATCTTCATAAGCAAGCCCTTCCCTAGTTTTCTGTGGTaGTGGGGAATGAACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HGFPFWEASIAIFISKPFPSFLW*WGMNPG Trigger: CCCTGGGTTCATTCCCCAGCACCACAGAAAACTAGG...GAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGAGCACTGAGTTCAATTCCCAGCACCTACATGGAGGCTCACAACCACCTATGTGCATCCCTTTGTaGTTAGTGCCTACAGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: IRSTEFNSQHLHGGSQPPMCIPL*LVPTEA Trigger: AGCCTCTGTAGGCACTAATCACAAAGGGATGCACAT...AGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACTCAGTGCTCCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTAGGTATTGCATGGTTATaGCAGTGTCAGAACGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLGIAWL*QCQNVA Trigger: CGCCACGTTCTGACACTGTCATAACCATGCAATACC...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTATCGGTATGGAGACAGTaGTCAGTACACACTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLSVWRQ*SVHTQL Trigger: CAGCTGAGTGTGTACTGAGCACTGTCTCCATACCGA...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGCTTTCCTTTCTGGGAAGCATCCATTGCCATCTTCATAAGCAAGCCCTTCTCCCTAACTGTCTCCTaGGAGAGGGTGTATATGCTT | + |
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Preference number: 2 (lower is better) Translates to: HGFPFWEASIAIFISKPFSLTVS*ERVYML Trigger: AAGCATATACACCCTCTCTCAGGAGACAGTTAGGGA...GAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGAAACTAGTGCAGGCATaGTGGCATATACATGTATAC | + |
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Preference number: 2 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWKLVQA*WHIHVY Trigger: GTATACATGTATATGCCATCATGCCTGCACTAGTTT...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTTTCCTTTCTGGGAAGCATCCATTGCCATCTTCATAAGCAAGCCCTTCTTATGGCTCAGGGCTTaGCAACACAGTATCGATCCA | + |
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Preference number: 2 (lower is better) Translates to: HGFPFWEASIAIFISKPFLWLRA*QHSIDP Trigger: TGGATCGATACTGTGTTGCCAAGCCCTGAGCCATAA...GAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTTTCCTTTCTGGGAAGCATCCATTGCCATCTTCATAAGCAAGCCCTTCCTAACATATGGGTGCTaGGAATTGAACCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HGFPFWEASIAIFISKPFLTYGC*ELNPGP Trigger: AGGACCTGGGTTCAATTCCCAGCACCCATATGTTAG...GAAGGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGAGCACTGAGTTCAATTCCCAGCACCTACATGGAGGCTCACAACCACCTCTGTGTCACTTTTCATaGCTTTCCTTTCTGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: IRSTEFNSQHLHGGSQPPLCHFS*LSFLGS Trigger: GCTTCCCAGAAAGGAAAGCCATGAAAAGTGACACAG...AGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACTCAGTGCTCCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGGCTGGAAAGATGGCTCAGCGATTAGGAGCACTGAGTTCAATTCCCAGCATAATTTTTGACTTGTaGCCTTCTTATCTATGCCCG | + |
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Preference number: 2 (lower is better) Translates to: KGAGKMAQRLGALSSIPSIIFDL*PSYLCP Trigger: CGGGCATAGATAAGAAGGTCACAAGTCAAAAATTAT...GCTGGGAATTGAACTCAGTGCTCCTAATCGCTGAGCCATCTTTCCAGCCCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGGAGCACTGAGTTCAATTCCCAGCACCTACATGGAGGCTCACAACCACCTAACTTCCTACACACATaGTTTTCCAGCTGTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: IRSTEFNSQHLHGGSQPPNFLHT*FSSCVT Trigger: AGTGACACAGCTGGAAAAGCATGTGTGTAGGAAGTT...AGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACTCAGTGCTCCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACAAGGATCTGTTCGGTATaGAGACAGTGCTCAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: TLSPCNPYTLVVAIYLETRICSV*RQCSVH Trigger: GTGTACTGAGCACTGTCTCCATACCGAACAGATCCT...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACACACAGCAGACTTATCTaGCAGCCTTTGTTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TLSPCNPYTLVVAIYLETHSRLI*QPLFPF Trigger: GAAGGGAAACAAAGGCTGCCAGATAAGTCTGCTGTG...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CAA 90 bp | CATCCCGGGCTTGGTCCAATCAATAAGGACTTATTTCCTGTCCATTaGCTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HPGLGPINKDLFPVH*LRSRERVSLIISVA Trigger: AGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAGCAAATGGACAGGAAATAAGTCCTTATTGATTGGACCAAGCCCGGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGTCATGCACTTGAGGTATTGCATGGTTATGACAGTGTCAGAACGTGGCGAATCTTCTTGCTTCTGTaGCCAGTCAATAATCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: MGHALEVLHGYDSVRTWRIFLLL*PVNNPH Trigger: GTGAGGATTATTGACTGGTCACAGAAGCAAGAAGAT...TCGCCACGTTCTGACACTGTCATAACCATGCAATACCTCAAGTGCATGACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTATCTTATTTCTTCAGGTaGCTTATGATGGCAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLSYFFR*LMMAAE Trigger: TTCTGCTGCCATCATAAGTCACCTGAAGAAATAAGA...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACAAGGAAGCAATCTTCTTaGTTCTGTGACCAGTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: TLSPCNPYTLVVAIYLETRKQSS*FCDQSI Trigger: TATTGACTGGTCACAGAAGCAAGAAGATTGCTTCCT...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CAA 90 bp | TCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTCTCGTTTaGTTTGTAGTGGTTCCAAAGGATAGATTCATTAAGCAGTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SGVTSENRVTFFLLV*FVVVPKDRFIKQSD Trigger: ATCTGACTGCTTAATGAATCTATCCTTTGGAACCACTACAAACAAAACGAGAAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
||
| 3UTR GCA 72 bp | CCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTaGAGCTTCCAGCTTGCTCTGTCCTCTGTGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPELASSASLDT*SFQLALSSVEG Trigger: TCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR CCA 72 bp | TCGACACCTGCAGCTTCCAGCTTGCTCTGTCCTCTGTaGAAGGAAAACCACAGCCACCGCCCTGGCGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: STPAASSLLCPL*KENHSHRPGAI Trigger: GATGGCGCCAGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR GCA 72 bp | ATCCAGTGCTTCGCTCGACACCTGCAGCTTCCAGCTTaGTCTGTCCTCTGTGGAAGGAAAACCACAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: IQCFARHLQLPA*SVLCGRKTTAT Trigger: GGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR GCA 72 bp | ATTGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTaGTTCGCTCGACACCTGCAGCTTCCAGCTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IGVDVSPRAGIQ*FARHLQLPACS Trigger: AGAGCAAGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR TCA 72 bp | AGGTCTTCTCCACTACGACAGACTGGTCATTGGTGTTaGTGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSPLRQTGHWC*CVPQSWHPVLR Trigger: GCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGTCGTAGTGGAGAAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR TCA 72 bp | TCTGGCCCAGGTAGGTCTCTGTCCCTAACTGTCTCCTaGGAGAGGGTGTATATGCTTATGGCTCAGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SGPGRSLSLTVS*ERVYMLMAQGL Trigger: CAAGCCCTGAGCCATAAGCATATACACCCTCTCTCAGGAGACAGTTAGGGACAGAGACCTACCTGGGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACTGGTCATTGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGTTATTTCCTGTCCATTaGCTGAGGTCACGGGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: TDWSLVLMCPPELASSASLFPVH*LRSRER Trigger: TCGCTCCCGTGACCTCAGCAAATGGACAGGAAATAA...CGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR-3UTR CAA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGCTTATGGCTCAGGGCTaGGCAACACAGTATCGATCC | + |
|
Preference number: 3 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWLMAQG*ATQYRS Trigger: GGATCGATACTGTGTTGCCAAGCCCTGAGCCATAAG...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | AGGTGTGCACCACCACACCAGGTGCTTGCTCTTCTCTaGACTTCCTACACACATGCTTTTCCAGCTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RCAPPHQVLALL*TSYTHAFPAVS Trigger: TGACACAGCTGGAAAAGCATGTGTGTAGGAAGTTCAGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR GCA 72 bp | CTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTaGTCTTCTCTGAACTTCCTACACACATGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWLQVCTTTPGA*SSLNFLHTCFS Trigger: GGAAAAGCATGTGTGTAGGAAGTTCAGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR GCA 72 bp | AGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTaGTTGCTCTTCTCTGAACTTCCTACACACATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: STVVTGVHHHTR*LLFSELPTHML Trigger: AAGCATGTGTGTAGGAAGTTCAGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | GGGATCAAGAATTCAAGATCACTTCCAGAGCCAGCCTaGGATCCATCAGACCCTGTCTCAGCGAATCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GIKNSRSLPEPA*DPSDPVSANHP Trigger: TGGATGATTCGCTGAGACAGGGTCTGATGGATCCCAGGCTGGCTCTGGAAGTGATCTTGAATTCTTGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTATATGGGTGCTGGGAATaGAACCCAGGTCCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLYGCWE*NPGPLE Trigger: TTCCAGAGGACCTGGGTTCAATTCCCAGCACCCATA...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | TGGCCTCAAACCCCCTGTGTAGCTAAGGATAATTTTTaGCTTGTGACCTTCTTATCTATGCCCGCCGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WPQTPCVAKDNF*LVTFLSMPAGC Trigger: GCACCCGGCGGGCATAGATAAGAAGGTCACAAGTCAAAAATTATCCTTAGCTACACAGGGGGTTTGAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | CCAGCCCAAGACAGGTTCTTGATACTTAGTCTAGGCTaGCCTCTAAGAATCCTCTCCCTCTATCTCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PAQDRFLILSLG*PLRILSLYLLS Trigger: ACTCAGGAGATAGAGGGAGAGGATTCTTAGAGGCCAGCCTAGACTAAGTATCAAGAACCTGTCTTGGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGCTTATCTGGCAGCCTTaGTTTCCCTTCTTCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWLIWQP*FPFFSK Trigger: TTTACTGAAGAAGGGAAACAAAGGCTGCCAGATAAG...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | GTTGCTGAAGCCTCAAGTGTGCTCTGGCGTGACAAGTaGAAACCGCGTGACCTTTTTCCTTCTCGTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VAEASSVLWRDK*KPRDLFPSRFV Trigger: AACAAAACGAGAAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTTCAGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
||
| 3UTR TCA 72 bp | AAGACAGCAGGCAACACAGACTTTTGCTTAATGCGTTaGGGTCTTCTCCACTACGACAGACTGGTCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KTAGNTDFCLMR*GLLHYDRLVIG Trigger: ACCAATGACCAGTCTGTCGTAGTGGAGAAGACCTCAACGCATTAAGCAAAAGTCTGTGTTGCCTGCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR CCA 72 bp | CCTGAGAGAGGGTGTATATGCTTATGGCTCAGGGCTTaGCAACACAGTATCGATCCATTGATCCTTAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PERGCICLWLRA*QHSIDPLILRI Trigger: TATCCTAAGGATCAATGGATCGATACTGTGTTGCCAAGCCCTGAGCCATAAGCATATACACCCTCTCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | ATGGTTATGACAGTGTCAGAACGTGGCGAGCCTAAGTaGCATGTCAGTACTTTCAGGGATAGCCGAGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: MVMTVSERGEPK*HVSTFRDSRDF Trigger: AAAATCTCGGCTATCCCTGAAAGTACTGACATGTCACTTAGGCTCGCCACGTTCTGACACTGTCATAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | GCAATAGGTCCCTTAGGACTGGAGTTACAATGGTTATaGACTAACATATGGGTGCTGGGAATTGAACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIGPLGLELQWL*TNIWVLGIEPR Trigger: CCTGGGTTCAATTCCCAGCACCCATATGTTAGTTCATAACCATTGTAACTCCAGTCCTAAGGGACCTATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | ATGGCTGCACCCTTTGTAATCAGTCACTTTGTTCTCTaGAAATACAACATAGGACTCTGTCCCCCTGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: MAAPFVISHFVL*KYNIGLCPPAT Trigger: GGTTGCAGGGGGACAGAGTCCTATGTTGTATTTTCAGAGAACAAAGTGACTGATTACAAAGGGTGCAGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | GCAGGCATGATGGCATATACATGTATACCCAACATGTaGGATCAAGAATTCAAGATCACTTCCAGAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGMMAYTCIPNM*DQEFKITSRAS Trigger: GCTGGCTCTGGAAGTGATCTTGAATTCTTGATCCCACATGTTGGGTATACATGTATATGCCATCATGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | TTTTCCAGCTGTGTCACTTTTCATGGCTTTCCTTTCTaGGAAGCATCCATTGCCATCTTCATAAGCAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FSSCVTFHGFPF*EASIAIFISKP Trigger: GGGCTTGCTTATGAAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATGAAAAGTGACACAGCTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | CCTACACACATGCTTTTCCAGCTGTGTCACTTTTCATaGCTTTCCTTTCTGGGAAGCATCCATTGCCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTHMLFQLCHFS*LSFLGSIHCHL Trigger: AAGATGGCAATGGATGCTTCCCAGAAAGGAAAGCCATGAAAAGTGACACAGCTGGAAAAGCATGTGTGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACACATTCAACACAAGTGTaGTATGTGGATGAGCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TLSPCNPYTLVVAIYLETHSTQV*YVDERF Trigger: AAAGCGCTCATCCACATACAACACTTGTGTTGAATG...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | CTTGACCTCACAGAGATCCGTTTGCTTCTTGCCTCTTaGGTGCTGGAATTAAACATACAGTTGATCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: LDLTEIRLLLAS*VLELNIQLITS Trigger: AGATGTGATCAACTGTATGTTTAATTCCAGCACCCAAGAGGCAAGAAGCAAACGGATCTCTGTGAGGTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | GATTCAAAACTCCCAAGGTACTCTTCAAACTGCTGCTaGACAGGTTCTAAGAGGAAGCAATCTTCTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DSKLPRYSSNCC*TGSKRKQSSCF Trigger: GAAGCAAGAAGATTGCTTCCTCTTAGAACCTGTTCAGCAGCAGTTTGAAGAGTACCTTGGGAGTTTTGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR TCA 72 bp | CTCACAACCACCTGTAATGGGATCCGATGGTGTGTCTaGAGACAGCTACAGTGCACTCATATACATTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTTTCNGIRWCV*RQLQCTHIHLK Trigger: TTTTAAATGTATATGAGTGCACTGTAGCTGTCTTCAGACACACCATCGGATCCCATTACAGGTGGTTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CCA 72 bp | ACATTTAAAATTAAGGTAGTGAGGATCTGTTCGGTATaGAGACAGTGCTCAGTACACACTCAGCTGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TFKIKVVRICSV*RQCSVHTQLPS Trigger: AGATGGCAGCTGAGTGTGTACTGAGCACTGTCTCCATACCGAACAGATCCTCACTACCTTAATTTTAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCTGGCTGGTGTGGGGCCCCGCAGCCTTTaGTATGAGGAGCACGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPSTGFKAMPHHCLAGVGPRSL*YEEHDQ Trigger: CTGGTCGTGCTCCTCATATCAAAGGCTGCGGGGCCC...CACACCAGCCAGGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGGTCATTGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGAGCCGATCTGGCCTCTaGGGGAGGGAAGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDWSLVLMCPPELASSASSRSGL*GREALQ Trigger: CTGGAGAGCTTCCCTCCCTCAGAGGCCAGATCGGCT...CGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR GCA 90 bp | GGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCAGCAGGCTCATGAAGGATaGGGGGTAGCCCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDVSPRAGIQCFARHLQQAHEG*GVAHDL Trigger: AAGATCGTGGGCTACCCCGCATCCTTCATGAGCCTG...CTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCAGCTTCCAGCGCTAGCAAGGCACAATaGGACAGGAAAGTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVPQSWHPVLRSTPAASSASKAQ*DRKVCS Trigger: GGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGC...GCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR TCA 90 bp | TTCTCCACTACGACAGACTGGTCATTGGTGTTGATGTGTCCCCCAGAGCTGGCACCGCAGCCTTTGATATaGGGAGCACGACCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTTTDWSLVLMCPPELAPQPLI*GARPGP Trigger: GGGGCCTGGTCGTGCTCCTCATATCAAAGGCTGCGG...TGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGTCGTAGTGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | GACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATACCACCAGTGGCGACTaGGGGGACCTGAAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DRVSQSNQPGLSWTHFVDTTSGD*GDLKPR Trigger: TCGGGGCTTCAGGTCCCCCCAGTCGCCACTGGTGGT...ATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCACTACGACAGACTGGTCATTGGTGTTGATGTGTCCCCCAGAGCTGGCAGCATGGCGATATTGCTaGGCTCGTCGCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTTTDWSLVLMCPPELAAWRYC*ARRSAG Trigger: GCCTGCTGAGCGACGAGCTCAGCAATATCGCCATGC...TGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGTCGTAGTGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTACCACCAGTGGCGACTaGGGGGACCTGAAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KPQVCSGVTSENRVTFFLTTSGD*GDLKPR Trigger: TCGGGGCTTCAGGTCCCCCCAGTCGCCACTGGTGGT...AAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCAGCTTCCAGCTATGTGCTTCCCATACTaGAATGCCATGTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSPRAGIQCFARHLQLPAMCFPY*NAMSWT Trigger: GGTCCAAGACATGGCATTCCAGTATGGGAAGCACAT...AGCTGGAAGCTGCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR TCA 90 bp | GACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATGCATGGCGATATTGCTaGGCTCGTCGCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRVSQSNQPGLSWTHFVDAWRYC*ARRSAG Trigger: GCCTGCTGAGCGACGAGCTCAGCAATATCGCCATGC...ATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATACCGCAGCCTTTGATATaGGGAGCACGACCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFLRVTSLGCPGLTLLIPQPLI*GARPGP Trigger: GGGGCCTGGTCGTGCTCCTCATATCAAAGGCTGCGG...TATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTAGCCGATCTGGCCTCTaGGGGAGGGAAGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPQVCSGVTSENRVTFFLSRSGL*GREALQ Trigger: CTGGAGAGCTTCCCTCCCTCAGAGGCCAGATCGGCT...AAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCTGGCTGGTGTGTGGAATGCCATGTCTTaGACCGCAGCATCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSTGFKAMPHHCLAGVWNAMS*TAASCF Trigger: AAAGCATGATGCTGCGGTCCAAGACATGGCATTCCA...CACACCAGCCAGGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| 3UTR CAA 72 bp | GAGGTCTTCTCCACTACGACAGACTGGTCATTGGTGTaGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVFSTTTDWSLV*MCPPELASSAS Trigger: CGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGTCGTAGTGGAGAAGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR GCA 90 bp | GTTGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTCAGGCTCATGAAGGATaGGGGGTAGCCCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLKFTRRRLASASEYWVQAHEG*GVAHDL Trigger: AAGATCGTGGGCTACCCCGCATCCTTCATGAGCCTG...AACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR GCA 90 bp | AATTCAAGATCACTTCCAGAGCCAGCCTGGGATCCATCAGACCCTGTCTCAGCGCAGGCTCATGAAGGATaGGGGGTAGCCCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSRSLPEPAWDPSDPVSAQAHEG*GVAHDL Trigger: AAGATCGTGGGCTACCCCGCATCCTTCATGAGCCTG...CGCTGAGACAGGGTCTGATGGATCCCAGGCTGGCTCTGGAAGTGATCTTGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CAA 72 bp | GAAAACCACAGCCACCGCCCTGGCGCCATCCCGGGCTaGGTCCAATCAATAAGGACTTATTTCCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ENHSHRPGAIPG*VQSIRTYFLSI Trigger: AATGGACAGGAAATAAGTCCTTATTGATTGGACCAAGCCCGGGATGGCGCCAGGGCGGTGGCTGTGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| 3UTR CAA 72 bp | TGCGTTGAGGTCTTCTCCACTACGACAGACTGGTCATaGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVEVFSTTTDWS*VLMCPPELASS Trigger: ACTGGATGCCAGCTCTGGGGGACACATCAACACCAATGACCAGTCTGTCGTAGTGGAGAAGACCTCAACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR TCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACAGGGCCCCGCAGCCTTTaGTATGAGGAGCACGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSPCNPYTLVVAIYLETGPRSL*YEEHDQ Trigger: CTGGTCGTGCTCCTCATATCAAAGGCTGCGGGGCCC...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGGCTGGAAAGATGGCTCAGCGATTAGGAGCACTGAGTTCAATTCCCAGCGCTAGCAAGGCACAATaGGACAGGAAAGTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGAGKMAQRLGALSSIPSASKAQ*DRKVCS Trigger: GGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGC...GCTGGGAATTGAACTCAGTGCTCCTAATCGCTGAGCCATCTTTCCAGCCCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACAGCATGGCGATATTGCTaGGCTCGTCGCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSPCNPYTLVVAIYLETAWRYC*ARRSAG Trigger: GCCTGCTGAGCGACGAGCTCAGCAATATCGCCATGC...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAAACTCCCAAGGTACTCTTCAAACTGCTGCTGAACAGGTTCTAAGAGGAACCACCAGTGGCGACTaGGGGGACCTGAAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQNSQGTLQTAAEQVLRGTTSGD*GDLKPR Trigger: TCGGGGCTTCAGGTCCCCCCAGTCGCCACTGGTGGT...TCCTCTTAGAACCTGTTCAGCAGCAGTTTGAAGAGTACCTTGGGAGTTTTGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCTGGCTACCAGGAGAGCAGTATaGATAAGTTCTGTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPPSTGFKAMPHHCLATRRAV*ISSVIS Trigger: AGAGATCACAGAACTTATCCATACTGCTCTCCTGGT...AGCCAGGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAGAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPQIHKTSTCLCLRVLGLNSIAA*QLFASK Trigger: CTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTT...TAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGCTGGCCTCTAAGAATCCTCTCCCTCTATCTCCTGAGTGCTGGGATTCTTAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGWPLRILSLYLLSAGILNSIAA*QLFASK Trigger: CTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTT...AAGAATCCCAGCACTCAGGAGATAGAGGGAGAGGATTCTTAGAGGCCAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPQVCSGVTSENRVTFFNSIAA*QLFASK Trigger: CTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTT...GAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
||
| CDS-3UTR TCA 90 bp | GGTTGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTCTGCCAAACTTCTTTaGCATGAGTATACCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GWPQIHKTSTCLCLRVLGSAKLL*HEYTPL Trigger: CAGTGGGGTATACTCATGTCAAAGAAGTTTGGCAGA...ACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGGGCTGGAAAGATGGCTCAGCGATTAGGAGCACTGAGTTCAATTCCCAGCTTTACTATCCCACGATaGACCAGGAGAGCAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: KGAGKMAQRLGALSSIPSFTIPR*TRRAVW Trigger: CCATACTGCTCTCCTGGTGCATCGTGGGATAGTAAA...GCTGGGAATTGAACTCAGTGCTCCTAATCGCTGAGCCATCTTTCCAGCCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTGAAGAGCTAGTCCATTaGATGCATTTGCTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPEHCGYRCAPPHQVLALEELVH*MHLLEG Trigger: TCCTTCTAGCAAATGCATGCAATGGACTAGCTCTTC...AAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATAGCTAGCAAGGCACAATaGGACAGGAAAGTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFLRVTSLGCPGLTLLIASKAQ*DRKVCS Trigger: GGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGC...TATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTATGTGCTTCCCATACTaGAATGCCATGTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VGLKFTRRRLASASEYWVMCFPY*NAMSWT Trigger: GGTCCAAGACATGGCATTCCAGTATGGGAAGCACAT...AACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| 3UTR CAA 72 bp | GCAGTCCCGGCTAGCCTTGACCTCACAGAGATCCGTTaGCTTCTTGCCTCTTGGGTGCTGGAATTAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: AVPASLDLTEIR*LLASWVLELNI Trigger: TATGTTTAATTCCAGCACCCAAGAGGCAAGAAGCAAACGGATCTCTGTGAGGTCAAGGCTAGCCGGGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTCTTCCAAGAAACTCCTaGTGTAAGACTACAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLKFTRRRLASASEYWVLPRNS*CKTTGA Trigger: AGCACCTGTAGTCTTACATCAGGAGTTTCTTGGAAG...AACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTACACAGGTCAATAGCTaGAGTCACACCTTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPQVCSGVTSENRVTFFLTQVNS*SHTFAS Trigger: GCTGGCAAAGGTGTGACTTCAGCTATTGACCTGTGT...AAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR GCA 90 bp | CTCTTAAGGCAGGAGGACCTGCAGTTCAAGGTCATTCTCCATAGCAAGTTTAAGACCAGCTTCCGCACCTaGATGGCGATATTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRQEDLQFKVILHSKFKTSFRT*MAILLS Trigger: GCTCAGCAATATCGCCATGCAGGTGCGGAAGCTGGT...CTTAAACTTGCTATGGAGAATGACCTTGAACTGCAGGTCCTCCTGCCTTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCCAGCTTGCTCTGTCCTCTGTGGAAGGAAAACCACAGCCACCGCCCTTCTTTAATAAAAGGCTaGAGGTCAGCATTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AASSLLCPLWKENHSHRPSLIKG*RSALIL Trigger: CAAGATCAATGCTGACCTCCAGCCTTTTATTAAAGA...AGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGGAAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CCA 90 bp | ACTTGCCTCTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCTGGTCTTTAATAAAAGGCTaGAGGTCAGCATTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLRVLGLKPCPTTAWSLIKG*RSALIL Trigger: CAAGATCAATGCTGACCTCCAGCCTTTTATTAAAGA...CCAGGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAGAGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGCTGGCCTCTAAGAATCCTCTCCCTCTATCTCCTGAGTGCTGGGATTCTTTCTGCCAAACTTCTTTaGCATGAGTATACCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGWPLRILSLYLLSAGILSAKLL*HEYTPL Trigger: CAGTGGGGTATACTCATGTCAAAGAAGTTTGGCAGA...AAGAATCCCAGCACTCAGGAGATAGAGGGAGAGGATTCTTAGAGGCCAGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCAGGCAACACAGACTTTTGCTTAATGCGTTGAGGTCTTCTCCACTACGAACACAGGTCAATAGCTaGAGTCACACCTTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSRQHRLLLNALRSSPLRTQVNS*SHTFAS Trigger: GCTGGCAAAGGTGTGACTTCAGCTATTGACCTGTGT...TCGTAGTGGAGAAGACCTCAACGCATTAAGCAAAAGTCTGTGTTGCCTGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR GCA 90 bp | GCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAATTTACTATCCCACGATaGACCAGGAGAGCAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNSQDVDLPLPPSTGFKFTIPR*TRRAVW Trigger: CCATACTGCTCTCCTGGTGCATCGTGGGATAGTAAA...TTTAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CCA 90 bp | TCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCGATTCCAATATCATCTaGGATAGAATTTTCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STCLCLRVLGLKPCPTTADSNII*DRIFLG Trigger: ACCAAGGAAAATTCTATCCCAGATGATATTGGAATC...GGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAGAGGCAAGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CCA 90 bp | CATTTGCTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCTGAAGCCAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRERVSLIISVAEANSIAA*QLFASK Trigger: CTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTT...GGCTTCAGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAGCAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| 3UTR CAA 72 bp | CAAGACAGCAGGCAACACAGACTTTTGCTTAATGCGTaGAGGTCTTCTCCACTACGACAGACTGGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSRQHRLLLNA*RSSPLRQTGHW Trigger: CCAATGACCAGTCTGTCGTAGTGGAGAAGACCTCAACGCATTAAGCAAAAGTCTGTGTTGCCTGCTGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR GCA 90 bp | TGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAGAAGAGCTAGTCCATTaGATGCATTTGCTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPQIHKTSTCLCLRVLGLEELVH*MHLLEG Trigger: TCCTTCTAGCAAATGCATGCAATGGACTAGCTCTTC...TAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTAGAAGCAGAGTTCTCCTaGTATACTCCATGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLEAEFS*YTPCTK Trigger: CTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTC...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATAGTGTCTGGAATGCCATGTCTTaGACCGCAGCATCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVRLILWVFQLRNNSVWNAMS*TAASCF Trigger: AAAGCATGATGCTGCGGTCCAAGACATGGCATTCCA...GACACTATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR CCA 90 bp | ATGGGTCATGCACTTGAGGTATTGCATGGTTATGACAGTGTCAGAACGTGGCGATGGAATGCCATGTCTTaGACCGCAGCATCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGHALEVLHGYDSVRTWRWNAMS*TAASCF Trigger: AAAGCATGATGCTGCGGTCCAAGACATGGCATTCCA...TCGCCACGTTCTGACACTGTCATAACCATGCAATACCTCAAGTGCATGACCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTAATGTGCTTCCCATACTaGAATGCCATGTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLMCFPY*NAMSWT Trigger: GGTCCAAGACATGGCATTCCAGTATGGGAAGCACAT...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATAGTGTCATGTGCTTCCCATACTaGAATGCCATGTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSPVRLILWVFQLRNNSVMCFPY*NAMSWT Trigger: GGTCCAAGACATGGCATTCCAGTATGGGAAGCACAT...GACACTATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTGTTTGTAGTGGTTCCAAAGGATAGATTCATTAAGCAGTCAGATAAAGGAGGGCCCCGCAGCCTTTaGTATGAGGAGCACGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLFVVVPKDRFIKQSDKGGPRSL*YEEHDQ Trigger: CTGGTCGTGCTCCTCATATCAAAGGCTGCGGGGCCC...TCCTTTATCTGACTGCTTAATGAATCTATCCTTTGGAACCACTACAAACAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR TCA 90 bp | ATGGGTCATGCACTTGAGGTATTGCATGGTTATGACAGTGTCAGAACGTGGCGACTTCCAAGAAACTCCTaGTGTAAGACTACAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGHALEVLHGYDSVRTWRLPRNS*CKTTGA Trigger: AGCACCTGTAGTCTTACATCAGGAGTTTCTTGGAAG...TCGCCACGTTCTGACACTGTCATAACCATGCAATACCTCAAGTGCATGACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTCTCTACCAGCTTCCGCACCTaGATGGCGATATTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTLLISSPKALLSASFSTSFRT*MAILLS Trigger: GCTCAGCAATATCGCCATGCAGGTGCGGAAGCTGGT...AGAGAATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTAAAGCTCCACAACCTTaGTGTTCTGTAGAAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPQVCSGVTSENRVTFFLKAPQP*CSVEEL Trigger: TAGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTT...AAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATGAAGCAGAGTTCTCCTaGTATACTCCATGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKSSPVRLILWVFQLRNNEAEFS*YTPCTK Trigger: CTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTC...ATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAGGCAGGAGGACCTGCAGTTCAAGGTCATTCTCCATAGCAAGTTTAAGGAAGCAGAGTTCTCCTaGTATACTCCATGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRQEDLQFKVILHSKFKEAEFS*YTPCTK Trigger: CTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTC...CTTAAACTTGCTATGGAGAATGACCTTGAACTGCAGGTCCTCCTGCCTTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCACTGTGGTTACAGGTGTGCACCACCACACCAGGTGCTTGCTCTTCTCTGATTCCAATATCATCTaGGATAGAATTTTCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTVVTGVHHHTRCLLFSDSNII*DRIFLG Trigger: ACCAAGGAAAATTCTATCCCAGATGATATTGGAATC...AGAGAAGAGCAAGCACCTGGTGTGGTGGTGCACACCTGTAACCACAGTGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| 3UTR CAA 72 bp | TTATGGCTCAGGGCTTGGCAACACAGTATCGATCCATaGATCCTTAGGATAGCTGAAGGAGGATTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWLRAWQHSIDP*ILRIAEGGFRG Trigger: TCCTCTGAATCCTCCTTCAGCTATCCTAAGGATCAATGGATCGATACTGTGTTGCCAAGCCCTGAGCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCTGAAGCCTCAAGTTCTGCCAAACTTCTTTaGCATGAGTATACCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSRERVSLIISVAEASSSAKLL*HEYTPL Trigger: CAGTGGGGTATACTCATGTCAAAGAAGTTTGGCAGA...ACTTGAGGCTTCAGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGCACTGAGTTCAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGGATCCTCTCCAATCTaGTTAATCCACAAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSTEFNSQHLHGGSQPPGSSPI*LIHKSL Trigger: AAGAGATTTGTGGATTAAGCAGATTGGAGAGGATCC...AGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACTCAGTGCTCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGAGGACCTGCAGTTCAAGGTCATTCTCCATAGCAAGTTTAAGAAGAGCAAAGCTCCACAACCTTaGTGTTCTGTAGAAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQEDLQFKVILHSKFKKSKAPQP*CSVEEL Trigger: TAGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTT...GCTCTTCTTAAACTTGCTATGGAGAATGACCTTGAACTGCAGGTCCTCCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGTCATGCACTTGAGGTATTGCATGGTTATGACAGTGTCAGAACGTGGCGAAAAGCTCCACAACCTTaGTGTTCTGTAGAAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MGHALEVLHGYDSVRTWRKAPQP*CSVEEL Trigger: TAGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTT...TCGCCACGTTCTGACACTGTCATAACCATGCAATACCTCAAGTGCATGACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| 3UTR CAA 72 bp | TCTATGCAGGCAAGCAGTGTCCATTCAACACAAGTGTaGTATGTGGATGAGCGCTTTACCATCCATGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SMQASSVHSTQV*YVDERFTIHVC Trigger: ACATACATGGATGGTAAAGCGCTCATCCACATACAACACTTGTGTTGAATGGACACTGCTTGCCTGCATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR TCA 90 bp | TTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCCACCTTTGCCAGCTTTaGTTGTTTCTCGCAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLISSPKALLSASFSGFFHLCQL*LFLATY Trigger: GTAAGTTGCGAGAAACAATCAAAGCTGGCAAAGGTG...GAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR TCA 90 bp | TTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTCTCTCACCTTTGCCAGCTTTaGTTGTTTCTCGCAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTLLISSPKALLSASFSHLCQL*LFLATL Trigger: GAGAGTTGCGAGAAACAATCAAAGCTGGCAAAGGTG...AGAGAATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162008.2 |
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| CDS-3UTR GCA 90 bp | ACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGGAAGAGCTAGTCCATTaGATGCATTTGCTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYFITKSSPVRLILWVFQEELVH*MHLLEG Trigger: TCCTTCTAGCAAATGCATGCAATGGACTAGCTCTTC...CTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR GCA 90 bp | ACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATCGCAACTCTCCAATCTaGTTAATCCACAAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSSPVRLILWVFQLRNNRNSPI*LIHKSL Trigger: AAGAGATTTGTGGATTAAGCAGATTGGAGAGTTGCG...ATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162008.2 |
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| CDS-3UTR CCA 90 bp | AAGTCATTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATGGAATGCCATGTCTTaGACCGCAGCATCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSLNTLLISSPKALLSASWNAMS*TAASCF Trigger: AAAGCATGATGCTGCGGTCCAAGACATGGCATTCCA...TGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAATGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR CCA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTATCTTTAATAAAAGGCTaGAGGTCAGCATTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLSLIKG*RSALIL Trigger: CAAGATCAATGCTGACCTCCAGCCTTTTATTAAAGA...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATAGTGTCTCTTTAATAAAAGGCTaGAGGTCAGCATTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPVRLILWVFQLRNNSVSLIKG*RSALIL Trigger: CAAGATCAATGCTGACCTCCAGCCTTTTATTAAAGA...GACACTATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGTCATTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCCTTCCAAGAAACTCCTaGTGTAAGACTACAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSLNTLLISSPKALLSALPRNS*CKTTGA Trigger: AGCACCTGTAGTCTTACATCAGGAGTTTCTTGGAAG...GGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAATGACTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| 3UTR CAA 72 bp | CTTGGTCCAATCAATAAGGACTTATTTCCTGTCCATTaGCTGAGGTCACGGGAGCGAGTCTCATTAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: LGPINKDLFPVH*LRSRERVSLII Trigger: AATAATTAATGAGACTCGCTCCCGTGACCTCAGCAAATGGACAGGAAATAAGTCCTTATTGATTGGACCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR GCA 90 bp | CAATTTCAAGTATTTGGCAGCTTAACATCTCCTTCACTTCTCCCAAATCTGATATTTACTATCCCACGATaGACCAGGAGAGCAGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: QFQVFGSLTSPSLLPNLIFTIPR*TRRAVW Trigger: CCATACTGCTCTCCTGGTGCATCGTGGGATAGTAAA...TATCAGATTTGGGAGAAGTGAAGGAGATGTTAAGCTGCCAAATACTTGAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CCA 90 bp | AAAGTCATTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCACCAGGAGAGCAGTATaGATAAGTTCTGTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVIKHVTYFITKSSPVRLTRRAV*ISSVIS Trigger: AGAGATCACAGAACTTATCCATACTGCTCTCCTGGT...GAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAATGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CCA 90 bp | CATTTGCTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCTGAAGCCGATTCCAATATCATCTaGGATAGAATTTTCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLRSRERVSLIISVAEADSNII*DRIFLG Trigger: ACCAAGGAAAATTCTATCCCAGATGATATTGGAATC...GGCTTCAGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAGCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
||
| CDS-3UTR TCA 90 bp | GTTTTGTTTGTAGTGGTTCCAAAGGATAGATTCATTAAGCAGTCAGATAAAGGACTTCCAAGAAACTCCTaGTGTAAGACTACAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFVVVPKDRFIKQSDKGLPRNS*CKTTGA Trigger: AGCACCTGTAGTCTTACATCAGGAGTTTCTTGGAAG...TCCTTTATCTGACTGCTTAATGAATCTATCCTTTGGAACCACTACAAACAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| 3UTR CAA 72 bp | ACAAGTGAAAACCGCGTGACCTTTTTCCTTCTCGTTTaGTTTGTAGTGGTTCCAAAGGATAGATTCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSENRVTFFLLV*FVVVPKDRFIK Trigger: CTTAATGAATCTATCCTTTGGAACCACTACAAACAAAACGAGAAGGAAAAAGGTCACGCGGTTTTCACTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS TCA 90 bp | CACGATCTTCTCCGCCTCGGACACCACCTGGTTCCAATGGGCCGGTaGCCTGGAGGAGCGCCCGCGCCAGGAGCCCGCCGAGGAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HDLLRLGHHLVPMGR*PGGAPAPGARRGDA Trigger: AGCATCTCCTCGGCGGGCTCCTGGCGCGGGCGCTCCTCCAGGTCACCGGCCCATTGGAACCAGGTGGTGTCCGAGGCGGAGAAGATCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 90 bp | TCTTCTCCGCCTCGGACACCACCTGGTTCCAATGGGCCGGTGACCTaGAGGAGCGCCCGCGCCAGGAGCCCGCCGAGGAGATGCTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPPRTPPGSNGPVT*RSARARSPPRRCCR Trigger: TCGACAGCATCTCCTCGGCGGGCTCCTGGCGCGGGCGCTCCTCCAGGTCACCGGCCCATTGGAACCAGGTGGTGTCCGAGGCGGAGAAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 90 bp | AGGAGCACGACCAGGCCCCGCAGTTGTAGGTTATGCCGGCTGTCGTaGACGAGGGCCCTGGCAGTGGTAAGCAGAGGGTGTCCCGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTTRPRSCRLCRLS*TRALAVVSRGCPVP Trigger: GGGGACGGGACACCCTCTGCTTACCACTGCCAGGGCCCTCGTGCACGACAGCCGGCATAACCTACAACTGCGGGGCCTGGTCGTGCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 90 bp | GCAGTGGTAAGCAGAGGGTGTCCCGTCCCCACCAGCTTCCGCACCTaGATGGCGATATTGCTGAGCTCGTCGCTCAGCAGGCAGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVSRGCPVPTSFRT*MAILLSSSLSRQRR Trigger: CCTGCGCTGCCTGCTGAGCGACGAGCTCAGCAATATCGCCATGCAGGTGCGGAAGCTGGTGGGGACGGGACACCCTCTGCTTACCACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 90 bp | ATTGCTGAGCTCGTCGCTCAGCAGGCAGCGCAGGCTCATGAAGGATaGGGGGTAGCCCACGATCTTCTCCGCCTCGGACACCACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IAELVAQQAAQAHEG*GVAHDLLRLGHHLV Trigger: AACCAGGTGGTGTCCGAGGCGGAGAAGATCGTGGGCTACCCCGCATCCTTCATGAGCCTGCGCTGCCTGCTGAGCGACGAGCTCAGCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | TTGGTGTTGATGTGTCCCCCAGAGCTGGCATCCAGTGCTTCGCTCGACACCTGCACCTGCATGGCGATATaGCTGAGCTCGTCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLMCPPELASSASLDTCTCMAI*LSSSLS Trigger: GCTGAGCGACGAGCTCAGCAATATCGCCATGCAGGT...GCAGGTGTCGAGCGAAGCACTGGATGCCAGCTCTGGGGGACACATCAACACCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTGCTCTGTCCTCTGTGGAAGGAAAACCACAGCCACCGCCCTGGCGCCACAAGCTTCCTTTCTCTaGAGCCTCTCCAATCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PACSVLCGRKTTATALAPQASFL*SLSNLL Trigger: AAGCAGATTGGAGAGGCTCAAGAGAAAGGAAGCTTG...TGGCGCCAGGGCGGTGGCTGTGGTTTTCCTTCCACAGAGGACAGAGCAAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS CCA 90 bp | ATGTCTTGGACCGCAGCATCATGCTTTGCTAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAGGCACAATGGGACAGGAAAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSWTAASCFANSIAA*QLFASKAQWDRKVC Trigger: GCAGACTTTCCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATAACCTGCATGGCGATATaGCTGAGCTCGTCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGFLRVTSLGCPGLTLLITCMAI*LSSSLS Trigger: GCTGAGCGACGAGCTCAGCAATATCGCCATGCAGGT...TATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CAA 90 bp | ACCCAACATGTGGGATCAAGAATTCAAGATCACTTCCAGAGCCAGCCTGGGATCACCTGCATGGCGATATaGCTGAGCTCGTCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQHVGSRIQDHFQSQPGITCMAI*LSSSLS Trigger: GCTGAGCGACGAGCTCAGCAATATCGCCATGCAGGT...GATCCCAGGCTGGCTCTGGAAGTGATCTTGAATTCTTGATCCCACATGTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | ACTTGCCTCTGCCTCCGAGTACTGGGTTTAAAGCCATGCCCCACCACTGCCTGGAAAAGCTCCACAACCTaGGTGTTCTGTAGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCLCLRVLGLKPCPTTAWKSSTT*VFCRRA Trigger: AGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTTT...CCAGGCAGTGGTGGGGCATGGCTTTAAACCCAGTACTCGGAGGCAGAGGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: WPQIHKTSTCLCLRVLGLALLTP*QPGSSS Trigger: CGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGC...TAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS GCA 90 bp | ATGTGCTTCCCATACTGGAATGCCATGTCTTGGACCGCAGCATCATaGTTTGCTAACTCCATTGCAGCCTGGCAGCTCTTCGCTAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MCFPYWNAMSWTAAS*FANSIAAWQLFASK Trigger: CTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACATGGCATTCCAGTATGGGAAGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CCA 90 bp | GCTAACTCCATTGCAGCCTGGCAGCTCTTCGCTAGCAAGGCACAATaGGACAGGAAAGTCTGCTCCTTCCAGGTCGAGATTCCAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: ANSIAAWQLFASKAQ*DRKVCSFQVEIPIS Trigger: TGATATTGGAATCTCGACCTGGAAGGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTCAAGTGTGCTCTGGCGTGACAAGTGAAAACCGCGTGACCTTTTTCCTTGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KPQVCSGVTSENRVTFFLALLTP*QPGSSS Trigger: CGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGC...AAGGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR CAA 90 bp | GACAGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATCCGCAGCATCATGCTTaGCTAACTCCATTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRVSQSNQPGLSWTHFVDPQHHA*LTPLQP Trigger: AGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGG...ATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CAA 90 bp | GACAGCAGGCAACACAGACTTTTGCTTAATGCGTTGAGGTCTTCTCCACTACGAGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DSRQHRLLLNALRSSPLRALLTP*QPGSSS Trigger: CGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGC...TCGTAGTGGAGAAGACCTCAACGCATTAAGCAAAAGTCTGTGTTGCCTGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | GCCATGTATGTGTCTGTTGCCCATAGGAGCCAGAAGAAAGCAATAGGTCCCTTAGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AMYVSVAHRSQKKAIGPLALLTP*QPGSSS Trigger: CGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGC...TAAGGGACCTATTGCTTTCTTCTGGCTCCTATGGGCAACAGACACATACATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | ATTAGGAGCACTGAGTTCAATTCCCAGCACCTACATGGAGGCTCACAACCACCTCCGCAGCATCATGCTTaGCTAACTCCATTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRSTEFNSQHLHGGSQPPPQHHA*LTPLQP Trigger: AGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGG...AGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACTCAGTGCTCCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS GCA 90 bp | GCCTGGCAGCTCTTCGCTAGCAAGGCACAATGGGACAGGAAAGTCTaGTCCTTCCAGGTCGAGATTCCAATATCATCTGGGATAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: AWQLFASKAQWDRKV*SFQVEIPISSGIEF Trigger: AAATTCTATCCCAGATGATATTGGAATCTCGACCTGGAAGGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAGAAGAGCTAGTCCATaGCATGCATTTGCTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPQIHKTSTCLCLRVLGLRRASP*HAFARR Trigger: CCTTCTAGCAAATGCATGCAATGGACTAGCTCTTCT...TAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCTGAAGCCTCAAGTCCGCAGCATCATGCTTaGCTAACTCCATTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSRERVSLIISVAEASSPQHHA*LTPLQP Trigger: AGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGG...ACTTGAGGCTTCAGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR CAA 90 bp | ACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATCCGCAGCATCATGCTTaGCTAACTCCATTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TKSSPVRLILWVFQLRNNPQHHA*LTPLQP Trigger: AGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGG...ATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS-3UTR CAA 90 bp | CAATTCCCAGCACCTACATGGAGGCTCACAACCACCTGTAATGGGATCCGATGGTTAGAGTCACTGGCCTaGTCTTTAATAAAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QFPAPTWRLTTTCNGIRWLESLA*SLIKGW Trigger: CCAGCCTTTTATTAAAGACAAGGCCAGTGACTCTAA...CCATCGGATCCCATTACAGGTGGTTGTGAGCCTCCATGTAGGTGCTGGGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAACATGTGGGATCAAGAATTCAAGATCACTTCCAGAGCCAGCCTGGGATCAAAAGCTCCACAACCTaGGTGTTCTGTAGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQHVGSRIQDHFQSQPGIKSSTT*VFCRRA Trigger: AGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTTT...GATCCCAGGCTGGCTCTGGAAGTGATCTTGAATTCTTGATCCCACATGTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
||
| CDS CCA 90 bp | GGACAGGAAAGTCTGCTCCTTCCAGGTCGAGATTCCAATATCATCTaGGATAGAATTTTCCTTGGTGGAAGCAGAGTTCTCCTGGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: GQESLLLPGRDSNII*DRIFLGGSRVLLVY Trigger: GTATACCAGGAGAACTCTGCTTCCACCAAGGAAAATTCTATCCCAGATGATATTGGAATCTCGACCTGGAAGGAGCAGACTTTCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | GCCTCAAATTCACAAGACGTCGACTTGCCTCTGCCTCCGAGTACTGGGTTTAAATTAGAGTCACTGGCCTaGTCTTTAATAAAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASNSQDVDLPLPPSTGFKLESLA*SLIKGW Trigger: CCAGCCTTTTATTAAAGACAAGGCCAGTGACTCTAA...TTTAAACCCAGTACTCGGAGGCAGAGGCAAGTCGACGTCTTGTGAATTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAGGCAGGAGGACCTGCAGTTCAAGGTCATTCTCCATAGCAAGTTTAAGCAAGCTTCCTTTCTCTaGAGCCTCTCCAATCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRQEDLQFKVILHSKFKQASFL*SLSNLL Trigger: AAGCAGATTGGAGAGGCTCAAGAGAAAGGAAGCTTG...CTTAAACTTGCTATGGAGAATGACCTTGAACTGCAGGTCCTCCTGCCTTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTCTCAGAGTAACCAGCCTGGGCTGTCCTGGACTCACTTTGTTGATAAGCTCAGGATAGCTATTTaGTTTCCAAACTGCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVSQSNQPGLSWTHFVDKLRIAI*FPNCMS Trigger: AGACATGCAGTTTGGAAACAAAATAGCTATCCTGAG...CTTATCAACAAAGTGAGTCCAGGACAGCCCAGGCTGGTTACTCTGAGAAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159139.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTCCATTTGCTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCAGAAGAGCTAGTCCATaGCATGCATTTGCTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCPFAEVTGASLINYFCCRRASP*HAFARR Trigger: CCTTCTAGCAAATGCATGCAATGGACTAGCTCTTCT...GCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAGCAAATGGACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | ACTCTGTCCCCCTGCAACCCCTATACACTAGTTGTGGCCATTTATTTGGAAACAAGAAGAGCTAGTCCATaGCATGCATTTGCTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: TLSPCNPYTLVVAIYLETRRASP*HAFARR Trigger: CCTTCTAGCAAATGCATGCAATGGACTAGCTCTTCT...TGTTTCCAAATAAATGGCCACAACTAGTGTATAGGGGTTGCAGGGGGACAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGTCACGGGAGCGAGTCTCATTAATTATTTCTGTTGCTGAAGCCTCAAGTAAAAGCTCCACAACCTaGGTGTTCTGTAGAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LRSRERVSLIISVAEASSKSSTT*VFCRRA Trigger: AGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTTT...ACTTGAGGCTTCAGCAACAGAAATAATTAATGAGACTCGCTCCCGTGACCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | GACAGCAGGCAACACAGACTTTTGCTTAATGCGTTGAGGTCTTCTCCACTACGATTAGAGTCACTGGCCTaGTCTTTAATAAAAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DSRQHRLLLNALRSSPLRLESLA*SLIKGW Trigger: CCAGCCTTTTATTAAAGACAAGGCCAGTGACTCTAA...TCGTAGTGGAGAAGACCTCAACGCATTAAGCAAAAGTCTGTGTTGCCTGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | ACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTAAGGAACAATTTAGAGTCACTGGCCTaGTCTTTAATAAAAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TKSSPVRLILWVFQLRNNLESLA*SLIKGW Trigger: CCAGCCTTTTATTAAAGACAAGGCCAGTGACTCTAA...ATTGTTCCTTAGCTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095725.11 ENSMUST00000162008.2 |
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| CDS GCA 90 bp | GGTCCATCAGATGACTGTAATTCACTTAAGTTTACTATCCCACGATaGACCAGGAGAGCAGTATGGATAAGTTCTGTGATCTCTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GPSDDCNSLKFTIPR*TRRAVWISSVISAK Trigger: TTTGGCAGAGATCACAGAACTTATCCATACTGCTCTCCTGGTGCATCGTGGGATAGTAAACTTAAGTGAATTACAGTCATCTGATGGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 90 bp | ATATCATCTGGGATAGAATTTTCCTTGGTGGAAGCAGAGTTCTCCTaGTATACTCCATGCACCAAGTCCATAAGAGCACTTGATAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: ISSGIEFSLVEAEFS*YTPCTKSIRALDKS Trigger: GCTTTTATCAAGTGCTCTTATGGACTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTCCACCAAGGAAAATTCTATCCCAGATGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS-3UTR CAA 90 bp | ACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTCTCTGGGTTTTTCAGCTCAGGATAGCTATTTaGTTTCCAAACTGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: TYFITKSSPVRLILWVFQLRIAI*FPNCMS Trigger: AGACATGCAGTTTGGAAACAAAATAGCTATCCTGAG...CTGAAAAACCCAGAGAATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS-3UTR CAA 90 bp | AAAGTCATTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCACACCTTTGCCAGCTTaGATTGTTTCTCGCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: KVIKHVTYFITKSSPVRLTPLPA*IVSRNS Trigger: AGAGTTGCGAGAAACAATCAAAGCTGGCAAAGGTGT...GAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAATGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162008.2 |
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| CDS-3UTR CAA 90 bp | GTCATTAAACACGTTACTTATTTCATCACCAAAAGCTCTCCTGTCCGCCTCATTACACCTTTGCCAGCTTaGATTGTTTCTCGCAACTTA | + |
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Preference number: 5 (lower is better) Translates to: VIKHVTYFITKSSPVRLITPLPA*IVSRNL Trigger: TAAGTTGCGAGAAACAATCAAAGCTGGCAAAGGTGT...AATGAGGCGGACAGGAGAGCTTTTGGTGATGAAATAAGTAACGTGTTTAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095725.11 |
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| CDS GCA 72 bp | CTCGTCGCTCAGCAGGCAGCGCAGGCTCATGAAGGATaGGGGGTAGCCCACGATCTTCTCCGCCTCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LVAQQAAQAHEG*GVAHDLLRLGH Trigger: GTGTCCGAGGCGGAGAAGATCGTGGGCTACCCCGCATCCTTCATGAGCCTGCGCTGCCTGCTGAGCGACGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 72 bp | AGCAGAGGGTGTCCCGTCCCCACCAGCTTCCGCACCTaGATGGCGATATTGCTGAGCTCGTCGCTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRGCPVPTSFRT*MAILLSSSLSR Trigger: CCTGCTGAGCGACGAGCTCAGCAATATCGCCATGCAGGTGCGGAAGCTGGTGGGGACGGGACACCCTCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 72 bp | ACCAGGCCCCGCAGTTGTAGGTTATGCCGGCTGTCGTaGACGAGGGCCCTGGCAGTGGTAAGCAGAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TRPRSCRLCRLS*TRALAVVSRGC Trigger: ACACCCTCTGCTTACCACTGCCAGGGCCCTCGTGCACGACAGCCGGCATAACCTACAACTGCGGGGCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 72 bp | ACCGCAGCATCATGCTTTGCTAACTCCATTGCAGCCTaGCAGCTCTTCGCTAGCAAGGCACAATGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: TAASCFANSIAA*QLFASKAQWDR Trigger: CCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CAA 90 bp | GGAATGCCATGTCTTGGACCGCAGCATCATGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCGCTAGCAAGGCACAATGGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: GMPCLGPQHHALLTP*QPGSSSLARHNGTG Trigger: TCCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACATGGCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CAA 90 bp | GCTTCCCATACTGGAATGCCATGTCTTGGACCGCAGCATCATGCTTaGCTAACTCCATTGCAGCCTGGCAGCTCTTCGCTAGCAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASHTGMPCLGPQHHA*LTPLQPGSSSLARH Trigger: GTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACATGGCATTCCAGTATGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CCA 72 bp | ATTGCAGCCTGGCAGCTCTTCGCTAGCAAGGCACAATaGGACAGGAAAGTCTGCTCCTTCCAGGTCGAGATT | + |
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Preference number: 6 (lower is better) Translates to: IAAWQLFASKAQ*DRKVCSFQVEI Trigger: AATCTCGACCTGGAAGGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 72 bp | CCATACTGGAATGCCATGTCTTGGACCGCAGCATCATaGTTTGCTAACTCCATTGCAGCCTGGCAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PYWNAMSWTAAS*FANSIAAWQLF Trigger: GAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACATGGCATTCCAGTATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CAA 72 bp | TGTCTTGGACCGCAGCATCATGCTTTGCTAACTCCATaGCAGCCTGGCAGCTCTTCGCTAGCAAGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: CLGPQHHALLTP*QPGSSSLARHN Trigger: ATTGTGCCTTGCTAGCGAAGAGCTGCCAGGCTGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS GCA 72 bp | CTCTTCGCTAGCAAGGCACAATGGGACAGGAAAGTCTaGTCCTTCCAGGTCGAGATTCCAATATCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LFASKAQWDRKV*SFQVEIPISSG Trigger: CCCAGATGATATTGGAATCTCGACCTGGAAGGAGCAGACTTTCCTGTCCCATTGTGCCTTGCTAGCGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS TCA 72 bp | TCTCTGCCAAACTTCTTTGACATGAGTATACCCCACTaGCCATGTCGTAGTTCTGACACGCAGCGTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SLPNFFDMSIPH*PCRSSDTQRSE Trigger: CTCGGAACGCTGCGTGTCAGAACTACGACATGGTCAGTGGGGTATACTCATGTCAAAGAAGTTTGGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 72 bp | ATGGCCATGTGCTTCCCATACTGGAATGCCATGTCTTaGACCGCAGCATCATGCTTTGCTAACTCCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: MAMCFPYWNAMS*TAASCFANSIA Trigger: TGCAATGGAGTTAGCAAAGCATGATGCTGCGGTCCAAGACATGGCATTCCAGTATGGGAAGCACATGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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| CDS CAA 90 bp | TCCTTCCAGGTCGAGATTCCAATATCATCTGGGATAGAATTTTCCTaGGTGGAAGCAGAGTTCTCCTGGTATACTCCATGCACCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFQVEIPISSGIEFS*VEAEFSWYTPCTKS Trigger: GGACTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTCCACCAAGGAAAATTCTATCCCAGATGATATTGGAATCTCGACCTGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 72 bp | TCCACAACCTTGGTGTTCTGTAGAAGAGCTAGTCCATaGCATGCATTTGCTAGAAGGAAGTCTCCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STTLVFCRRASP*HAFARRKSPLR Trigger: CCTGAGTGGAGACTTCCTTCTAGCAAATGCATGCAATGGACTAGCTCTTCTACAGAACACCAAGGTTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 72 bp | GGGATAGAATTTTCCTTGGTGGAAGCAGAGTTCTCCTaGTATACTCCATGCACCAAGTCCATAAGAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: GIEFSLVEAEFS*YTPCTKSIRAL Trigger: AAGTGCTCTTATGGACTTGGTGCATGGAGTATACCAGGAGAACTCTGCTTCCACCAAGGAAAATTCTATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CCA 72 bp | AGTCTGCTCCTTCCAGGTCGAGATTCCAATATCATCTaGGATAGAATTTTCCTTGGTGGAAGCAGAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLPGRDSNII*DRIFLGGSRVL Trigger: GAGAACTCTGCTTCCACCAAGGAAAATTCTATCCCAGATGATATTGGAATCTCGACCTGGAAGGAGCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 72 bp | GTCGAGATTCCAATATCATCTGGGATAGAATTTTCCTaGGTGGAAGCAGAGTTCTCCTGGTATACTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: VEIPISSGIEFS*VEAEFSWYTPC Trigger: GCATGGAGTATACCAGGAGAACTCTGCTTCCACCAAGGAAAATTCTATCCCAGATGATATTGGAATCTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 90 bp | GATAAAAGCTCCACAACCTTGGTGTTCTGTAGAAGAGCTAGTCCATaGCATGCATTTGCTAGAAGGAAGTCTCCACTCAGGATAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: DKSSTTLVFCRRASP*HAFARRKSPLRIAI Trigger: AATAGCTATCCTGAGTGGAGACTTCCTTCTAGCAAATGCATGCAATGGACTAGCTCTTCTACAGAACACCAAGGTTGTGGAGCTTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 90 bp | TTGCATGCATTTGCTAGAAGGAAGTCTCCACTCAGGATAGCTATTTaGTTTCCAAACTGCATGTCTTTCAGTGGTCCATCAGATGACTGT | + |
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Preference number: 6 (lower is better) Translates to: LHAFARRKSPLRIAI*FPNCMSFSGPSDDC Trigger: ACAGTCATCTGATGGACCACTGAAAGACATGCAGTTTGGAAACAAAATAGCTATCCTGAGTGGAGACTTCCTTCTAGCAAATGCATGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS GCA 72 bp | GATGACTGTAATTCACTTAAGTTTACTATCCCACGATaGACCAGGAGAGCAGTATGGATAAGTTCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: DDCNSLKFTIPR*TRRAVWISSVI Trigger: GATCACAGAACTTATCCATACTGCTCTCCTGGTGCATCGTGGGATAGTAAACTTAAGTGAATTACAGTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 72 bp | TTTGCTAGAAGGAAGTCTCCACTCAGGATAGCTATTTaGTTTCCAAACTGCATGTCTTTCAGTGGTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: FARRKSPLRIAI*FPNCMSFSGPS Trigger: TGATGGACCACTGAAAGACATGCAGTTTGGAAACAAAATAGCTATCCTGAGTGGAGACTTCCTTCTAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 |
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| CDS CAA 72 bp | GCTGAGTTTAGGTTAAAAGTCTTAGAGTCACTGGCCTaGTCTTTAATAAAAGGCTGGAGGTCAGCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: AEFRLKVLESLA*SLIKGWRSALI Trigger: GATCAATGCTGACCTCCAGCCTTTTATTAAAGACAAGGCCAGTGACTCTAAGACTTTTAACCTAAACTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095725.11 ENSMUST00000159139.8 ENSMUST00000160823.8 ENSMUST00000162008.2 |
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