Pregenerated sensors for PDPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033624Ensembl transcript IDs: ENSMUST00000039333.10, ENSMUST00000144377.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGTACCTTCAGTGAGGAGACCAGGACGGAGGGAAACTCGGCTCTaGGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: KVPSVRRPGRRETRL*ERCSSWQECGKGVS Trigger: AGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGAGTTTCCCTCCGTCCTGGTCTCCTCACTGAAGGTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
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| 3UTR GCA 90 bp | TGGTCGTCCAGAATGAACATAGCAAGGCGCTTATATACCCCGGTCTaGTTCTGCTGCAGCAGGGCATCCCGACCAATGAAGTCTATGCCC | + |
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Preference number: 1 (lower is better) Translates to: WSSRMNIARRLYTPV*FCCSRASRPMKSMP Trigger: GGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTATGTTCATTCTGGACGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR CCA 90 bp | CCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGTaGTCTTGCCAGCATACTTTCCGTTCCGGTAAATGGGTTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: PGIHGAPVCSYRHYW*SCQHTFRSGKWVLP Trigger: GGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTATGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR TCA 90 bp | TATATACCCCGGTCTGCTTCTGCTGCAGCAGGGCATCCCGACCAATaGAGTCTATGCCCTTCTCTAACTTCACTCGAGATTCTCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: YIPRSASAAAGHPDQ*SLCPSLTSLEILLH Trigger: GTGGAGGAGAATCTCGAGTGAAGTTAGAGAAGGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR GCA 90 bp | GTGCCCTGGCACAAACATGTAAGGACAAAGTTGGAGGATACTGGGTaGCAGGTAACTATTCCCCCTTCCACAGAGCAGACAGTGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: VPWHKHVRTKLEDTG*QVTIPPSTEQTVST Trigger: TGTGGACACTGTCTGCTCTGTGGAAGGGGGAATAGTTACCTGGCACCCAGTATCCTCCAACTTTGTCCTTACATGTTTGTGCCAGGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | GGTCAGTTAAGAGCCTGTTCTGTCTCCTCAGGAGCTTACTGCTACTaGTGCCCTGCTCAGCTCTCTAGTGGAGAAACAGTTCCTCTCATC | + |
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Preference number: 1 (lower is better) Translates to: GQLRACSVSSGAYCY*CPAQLSSGETVPLI Trigger: GATGAGAGGAACTGTTTCTCCACTAGAGAGCTGAGCAGGGCAGCAGTAGCAGTAAGCTCCTGAGGAGACAGAACAGGCTCTTAACTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | CCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCCTCAGGAGCTTACTaGTACTGCTGCCCTGCTCAGCTCTCTAGTGGAGAAACAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PIGQLRACSVSSGAY*YCCPAQLSSGETVP Trigger: AGGAACTGTTTCTCCACTAGAGAGCTGAGCAGGGCAGCAGTAGCAGTAAGCTCCTGAGGAGACAGAACAGGCTCTTAACTGACCTATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | TCCAGAATGAACATAGCAAGGCGCTTATATACCCCGGTCTGCTTCTaGTGCAGCAGGGCATCCCGACCAATGAAGTCTATGCCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SRMNIARRLYTPVCF*CSRASRPMKSMPFS Trigger: AGAGAAGGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTATGTTCATTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR GCA 90 bp | ATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGTGGTCTTaGCAGCATACTTTCCGTTCCGGTAAATGGGTTCTCCCCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: IHGAPVCSYRHYWWS*QHTFRSGKWVLPTK Trigger: CTTGGTGGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR CCA 90 bp | TGCATTTGGTGGGGAGCCTGGAAAGAAAGGATGGGAAGCAGTCTCTaGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CIWWGAWKERMGSSL*PALYLQFSVVICLA Trigger: AGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGGCTCCCCACCAAATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR CCA 90 bp | AGGCACTACTGGTGGTCTTGCCAGCATACTTTCCGTTCCGGTAAATaGGTTCTCCCCACCAAGGCCACAAATCAAGGTCTGTGTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: RHYWWSCQHTFRSGK*VLPTKATNQGLCHG Trigger: ACCATGACACAGACCTTGATTTGTGGCCTTGGTGGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR CCA 90 bp | AACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTaGTGGTCTTGCCAGCATACTTTCCGTTCCGGTAAATGGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: NPGIHGAPVCSYRHY*WSCQHTFRSGKWVL Trigger: GAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR GCA 90 bp | AGAATGAACATAGCAAGGCGCTTATATACCCCGGTCTGCTTCTGCTaGAGCAGGGCATCCCGACCAATGAAGTCTATGCCCTTCTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: RMNIARRLYTPVCFC*SRASRPMKSMPFSN Trigger: GTTAGAGAAGGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTATGTTCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR CCA 90 bp | ACTGAAATGTGTGGTGCATTTGGTGGGGAGCCTGGAAAGAAAGGATaGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TEMCGAFGGEPGKKG*EAVSGLHCTYSSQW Trigger: CCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGGCTCCCCACCAAATGCACCACACATTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | AGCACTCCTCCTCTAATAGTAGGAACTCAGCATCTGAGTTCACACTaGTCCTACTGGGAAAAGCAACAGAAAAGGCAGCATGGTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: STPPLIVGTQHLSSH*SYWEKQQKRQHGLS Trigger: AGACAAACCATGCTGCCTTTTCTGTTGCTTTTCCCAGTAGGAGCAGTGTGAACTCAGATGCTGAGTTCCTACTATTAGAGGAGGAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | TCTGGCTTTGTTCATGCTAGGGACACAAAGCCTGGGGCTCTGAAATaGAGTATGACCAGCATGGTTTACTTAATCATCCAAAACAACCCG | + |
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Preference number: 1 (lower is better) Translates to: SGFVHARDTKPGALK*SMTSMVYLIIQNNP Trigger: CGGGTTGTTTTGGATGATTAAGTAAACCATGCTGGTCATACTGCATTTCAGAGCCCCAGGCTTTGTGTCCCTAGCATGAACAAAGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 90 bp | AGAGGTGACAGGGTAGAGCTTGGCCTTGGCCTGAAACCGATGTCCTaGAATGTCAATTTCATATTCTCCTCGGTTGATGAAATCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: RGDRVELGLGLKPMS*NVNFIFSSVDEICC Trigger: ACAACAGATTTCATCAACCGAGGAGAATATGAAATTGACATTGCAGGACATCGGTTTCAGGCCAAGGCCAAGCTCTACCCTGTCACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR CCA 90 bp | CCTCTAATAGTAGGAACTCAGCATCTGAGTTCACACTGCTCCTACTaGGAAAAGCAACAGAAAAGGCAGCATGGTTTGTCTTTCCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: PLIVGTQHLSSHCSY*EKQQKRQHGLSFLS Trigger: TGAAAGGAAAGACAAACCATGCTGCCTTTTCTGTTGCTTTTCCCAGTAGGAGCAGTGTGAACTCAGATGCTGAGTTCCTACTATTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR CCA 90 bp | TGTATTTTGTATTCAATACCAAATAAACGTTCATTACACAGACTGTaGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: CILYSIPNKRSLHRL*NVTANSHIYQRERG Trigger: CCCTCTCTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGAACGTTTATTTGGTATTGAATACAAAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGAGCCTGCTGGAGGGATaGGAAGAGCCTGGATTATTA | + |
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Preference number: 2 (lower is better) Translates to: GSENDAPHGKNVGRECLASLLEG*EEPGLL Trigger: TAATAATCCAGGCTCTTCTCATCCCTCCAGCAGGCT...CGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR GCA 90 bp | AAAATTGTGTACATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACCCCGGTCTGCTTCTaGTGCAGCAGGGCATCCCGA | + |
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Preference number: 2 (lower is better) Translates to: KIVYITQAYMALQCVAIGTPVCF*CSRASR Trigger: TCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGT...GCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTATGTACACAATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCTGTGTCATGGTCGTCCAGAATGAACATAGCAAGGCGCTTATATACCCCCAAAGGTACCTTCAGTaGGGAGACCAGGACGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KVCVMVVQNEHSKALIYPQRYLQ*GDQDGG Trigger: CCCTCCGTCCTGGTCTCCTCACTGAAGGTACCTTTG...GGGGTATATAAGCGCCTTGCTATGTTCATTCTGGACGACCATGACACAGACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGGAACGATGCTCCTCATaGCAAGAATGTGGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SALRTMLLMARMWEGSVLERCSS*QECGKG Trigger: TCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTC...CAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCGCTTACTGCTACTGCTaGCCTGCTCAGCTCTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: SCASVFHPHRSVKSLFCLAYCYC*PAQLSS Trigger: ACTAGAGAGCTGAGCAGGGCAGCAGTAGCAGTAAGC...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | TCGGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGGCAACCTCAGCACAGTaGAACAGAATTATCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SALRTMLLMARMWEGSVLATSAQ*NRIICL Trigger: CAGGCAGATAATTCTGTTCCACTGTGCTGAGGTTGC...CAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTTAACTGAATTAAAGGCTGGCATGTGTTATGGCCAGCTAGCTCTCTTGCCTCAAAGGTACCTTCAGTaGGGAGACCAGGACGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TLTELKAGMCYGQLALLPQRYLQ*GDQDGG Trigger: CCCTCCGTCCTGGTCTCCTCACTGAAGGTACCTTTG...AGGCAAGAGAGCTAGCTGGCCATAACACATGCCAGCCTTTAATTCAGTTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGCCTGGGGCTCTGAAATaGAGTATGACCAGCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: GKKGWEAVSGLHCTYSSQPGALK*SMTSMV Trigger: AACCATGCTGGTCATACTGCATTTCAGAGCCCCAGG...CTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCAAGCAGTCTCTGGCCTaGACTGTACTTACAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SCASVFHPHRSVKSLFCLKQSLA*TVLTVL Trigger: GAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTT...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCACTGTCCTCAGAAAAATTGTGTACATAACCCAGGCATACATGGCGCTCGAACGATGCTCCTCATaGCAAGAATGTGGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FPTVLRKIVYITQAYMALERCSS*QECGKG Trigger: TCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTC...GAGCGCCATGTATGCCTGGGTTATGTACACAATTTTTCTGAGGACAGTGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGGGGATGAGAAGAGCCTaGATTATTAGGAGGGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GKKGWEAVSGLHCTYSSQGMRRA*IIRRGN Trigger: GTTACCCCTCCTAATAATCCAGGCTCTTCTCATCCC...CTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATTTACGAGGTATCAGGTaGCAACCTCAGCACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LACTVLTVLSGHLSGFVHLRGIR*QPQHSG Trigger: TCCACTGTGCTGAGGTTGCCACCTGATACCTCGTAA...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGTGGTAAAGTTGGAGGATACTaGGTGCCAGGTAACTATTCC | + |
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Preference number: 2 (lower is better) Translates to: RKDGKQSLACTVLTVLSGKVGGY*VPGNYS Trigger: GGAATAGTTACCTGGCACCCAGTATCCTCCAACTTT...ACCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGTCTGTGTCATGGTCGTCCAGAATGAACATAGCAAGGCGCTTATATACCCAATTCGGAGACTTCTaGGGGCATAATACCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SRSVSWSSRMNIARRLYTQFGDF*GHNTQH Trigger: ATGCTGGGTATTATGCCCTCAGAAGTCTCCGAATTG...GGTATATAAGCGCCTTGCTATGTTCATTCTGGACGACCATGACACAGACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCACCACACCCGAAATCTCAGTACTCAAGAGACTAATAAGCAAGAGGATCCTGGAAAGAAAGGATaGGAAGCAGTCTCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NCHHTRNLSTQETNKQEDPGKKG*EAVSGL Trigger: CAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGG...ATCCTCTTGCTTATTAGTCTCTTGAGTACTGAGATTTCGGGTGTGGTGACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | TCGGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGACAGAATTATCTGCCTaGTTAAGACACAAGTTATTC | + |
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Preference number: 2 (lower is better) Translates to: SALRTMLLMARMWEGSVLTELSA*LRHKLF Trigger: GAATAACTTGTGTCTTAACCAGGCAGATAATTCTGT...CAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTTAACTGAATTAAAGGCTGGCATGTGTTATGGCCAGCTAGCTCTCTTGCCTAAACAACAGTGCCACTaGAATGTGTGGTGCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: TLTELKAGMCYGQLALLPKQQCH*NVWCIW Trigger: CCAAATGCACCACACATTTCAGTGGCACTGTTGTTT...AGGCAAGAGAGCTAGCTGGCCATAACACATGCCAGCCTTTAATTCAGTTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGTGGTACAGAAAAGGCAGCATaGTTTGTCTTTCCTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RKDGKQSLACTVLTVLSGTEKAA*FVFPFK Trigger: TTTGAAAGGAAAGACAAACCATGCTGCCTTTTCTGT...ACCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCATGGAACAGAATTATCTaGCTGGTTAAGACACAAGTT | + |
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Preference number: 2 (lower is better) Translates to: WKERMGSSLWPALYLQFSWNRII*LVKTQV Trigger: AACTTGTGTCTTAACCAGGCAGATAATTCTGTTCCA...TGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR CAA 90 bp | TCACACTGCTCCTACTGGGAAAAGCAACAGAAAAGGCAGCATGGTTaGTCTTTCCTTTCAAATACTGGCATACCTGTTTACTCAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SHCSYWEKQQKRQHG*SFLSNTGIPVYSAK Trigger: TTTAGCTGAGTAAACAGGTATGCCAGTATTTGAAAGGAAAGACAAACCATGCTGCCTTTTCTGTTGCTTTTCCCAGTAGGAGCAGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR GCA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGAGTTATTCCCAGGGCTaGATCAGACACAAAATCATC | + |
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Preference number: 2 (lower is better) Translates to: SLHRLWNVTANSHIYQRESYSQG*IRHKII Trigger: GATGATTTTGTGTCTGATGCAGCCCTGGGAATAACT...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR TCA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGGGGACAGTTTGTATATaGGAGCAAACAAAATCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SLHRLWNVTANSHIYQREGTVCI*EQTKSV Trigger: CACTGATTTTGTTTGCTCTCATATACAAACTGTCCC...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CCA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGTTTCCTTTCAAATACTaGCATACCTGTTTACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLHRLWNVTANSHIYQREFPFKY*HTCLLS Trigger: GCTGAGTAAACAGGTATGCCAGTATTTGAAAGGAAA...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR CAA 90 bp | GAAATCTCAGTACTCAAGAGACTAATAAGCAAGAGGATCACAAATTaGAGGCTAGCTCCAATTTTCACAAAAACAACAGTGCCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EISVLKRLISKRITN*RLAPIFTKTTVPLK Trigger: TTTCAGTGGCACTGTTGTTTTTGTGAAAATTGGAGCTAGCCTCAAATTTGTGATCCTCTTGCTTATTAGTCTCTTGAGTACTGAGATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCCTGGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGGGTTCTGCCCGCCATaGTGGGTATGTGAGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GSLERKDGKQSLACTVLTGFCPP*WVCEPA Trigger: AGCAGGCTCACATACCCACAATGGCGGGCAGAACCC...TGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR TCA 72 bp | TCAGTGAGGAGACCAGGACGGAGGGAAACTCGGCTCTaGGAACGATGCTCCTCATGGCAAGAATGTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SVRRPGRRETRL*ERCSSWQECGK Trigger: CTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGAGTTTCCCTCCGTCCTGGTCTCCTCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
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| 3UTR TCA 72 bp | CTCCACAAGTGGGTTCTGCCCGCCATTGTGGGTATGTaGGCCTGCTGGAGGGATGAGAAGAGCCTGGATTAT | + |
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Preference number: 3 (lower is better) Translates to: LHKWVLPAIVGM*ACWRDEKSLDY Trigger: ATAATCCAGGCTCTTCTCATCCCTCCAGCAGGCTCACATACCCACAATGGCGGGCAGAACCCACTTGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR GCA 72 bp | ATAGCAAGGCGCTTATATACCCCGGTCTGCTTCTGCTaGAGCAGGGCATCCCGACCAATGAAGTCTATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IARRLYTPVCFC*SRASRPMKSMP Trigger: GGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR TCA 72 bp | CGGTCTGCTTCTGCTGCAGCAGGGCATCCCGACCAATaGAGTCTATGCCCTTCTCTAACTTCACTCGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: RSASAAAGHPDQ*SLCPSLTSLEI Trigger: AATCTCGAGTGAAGTTAGAGAAGGGCATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | CAGTTAAGAGCCTGTTCTGTCTCCTCAGGAGCTTACTaGTACTGCTGCCCTGCTCAGCTCTCTAGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLRACSVSSGAY*YCCPAQLSSGE Trigger: TTCTCCACTAGAGAGCTGAGCAGGGCAGCAGTAGCAGTAAGCTCCTGAGGAGACAGAACAGGCTCTTAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR GCA 72 bp | AACATAGCAAGGCGCTTATATACCCCGGTCTGCTTCTaGTGCAGCAGGGCATCCCGACCAATGAAGTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: NIARRLYTPVCF*CSRASRPMKSM Trigger: CATAGACTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | AGAATGAACATAGCAAGGCGCTTATATACCCCGGTCTaGTTCTGCTGCAGCAGGGCATCCCGACCAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RMNIARRLYTPV*FCCSRASRPMK Trigger: CTTCATTGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAAGCGCCTTGCTATGTTCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR CCA 72 bp | TGGTGGTCTTGCCAGCATACTTTCCGTTCCGGTAAATaGGTTCTCCCCACCAAGGCCACAAATCAAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WWSCQHTFRSGK*VLPTKATNQGL Trigger: CAGACCTTGATTTGTGGCCTTGGTGGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR CCA 72 bp | CATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGTaGTCTTGCCAGCATACTTTCCGTTCCGGTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: HGAPVCSYRHYW*SCQHTFRSGKW Trigger: CCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR TCA 72 bp | AGAATGTGGGAAGGGAGTGTCTTGCGTTACTTCCCATaGAAGTCGCTCAGCTCCACATCGTCCTTTCTACGC | + |
|
Preference number: 3 (lower is better) Translates to: RMWEGSVLRYFP*KSLSSTSSFLR Trigger: GCGTAGAAAGGACGATGTGGAGCTGAGCGACTTTCATGGGAAGTAACGCAAGACACTCCCTTCCCACATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | GCTCCAGTGTGTAGCTATAGGCACTACTGGTGGTCTTaGCAGCATACTTTCCGTTCCGGTAAATGGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: APVCSYRHYWWS*QHTFRSGKWVL Trigger: GAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | TGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTaGGTTACTTCCCATGAAAGTCGCTCAGCTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CSSWQECGKGVS*VTSHESRSAPH Trigger: ATGTGGAGCTGAGCGACTTTCATGGGAAGTAACGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCAAATGTGTGGTGCATTaGGTGGGGAGCCTGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCASVFHPHRSVKSLFCLKCVVH*VGSLER Trigger: TCTTTCCAGGCTCCCCACCAAATGCACCACACATTT...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR GCA 72 bp | AGCCTGGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTaGACTGTACTTACAGTTCTCAGTGGTCATCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLERKDGKQSLA*TVLTVLSGHLS Trigger: AGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR CCA 72 bp | CTGGCACAAACATGTAAGGACAAAGTTGGAGGATACTaGGTGCCAGGTAACTATTCCCCCTTCCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LAQTCKDKVGGY*VPGNYSPFHRA Trigger: TGCTCTGTGGAAGGGGGAATAGTTACCTGGCACCCAGTATCCTCCAACTTTGTCCTTACATGTTTGTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR CCA 72 bp | ATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTaGTGGTCTTGCCAGCATACTTTCCGTTCCGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHGAPVCSYRHY*WSCQHTFRSGK Trigger: TTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | CACAAACATGTAAGGACAAAGTTGGAGGATACTGGGTaGCAGGTAACTATTCCCCCTTCCACAGAGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: HKHVRTKLEDTG*QVTIPPSTEQT Trigger: TGTCTGCTCTGTGGAAGGGGGAATAGTTACCTGGCACCCAGTATCCTCCAACTTTGTCCTTACATGTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR CCA 72 bp | TGGCAACCTCAGCACAGTGGAACAGAATTATCTGCCTaGTTAAGACACAAGTTATTCCCAGGGCTGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: WQPQHSGTELSA*LRHKLFPGLHQ Trigger: CTGATGCAGCCCTGGGAATAACTTGTGTCTTAACCAGGCAGATAATTCTGTTCCACTGTGCTGAGGTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR CCA 72 bp | TCTCCCCACCAAGGCCACAAATCAAGGTCTGTGTCATaGTCGTCCAGAATGAACATAGCAAGGCGCTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: SPHQGHKSRSVS*SSRMNIARRLY Trigger: ATATAAGCGCCTTGCTATGTTCATTCTGGACGACCATGACACAGACCTTGATTTGTGGCCTTGGTGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR GCA 72 bp | AGGGTAGAGCTTGGCCTTGGCCTGAAACCGATGTCCTaGAATGTCAATTTCATATTCTCCTCGGTTGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: RVELGLGLKPMS*NVNFIFSSVDE Trigger: TTCATCAACCGAGGAGAATATGAAATTGACATTGCAGGACATCGGTTTCAGGCCAAGGCCAAGCTCTACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR CCA 72 bp | GTAGGAACTCAGCATCTGAGTTCACACTGCTCCTACTaGGAAAAGCAACAGAAAAGGCAGCATGGTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VGTQHLSSHCSY*EKQQKRQHGLS Trigger: AGACAAACCATGCTGCCTTTTCTGTTGCTTTTCCCAGTAGGAGCAGTGTGAACTCAGATGCTGAGTTCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR GCA 72 bp | CCTCTAATAGTAGGAACTCAGCATCTGAGTTCACACTaGTCCTACTGGGAAAAGCAACAGAAAAGGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLIVGTQHLSSH*SYWEKQQKRQH Trigger: ATGCTGCCTTTTCTGTTGCTTTTCCCAGTAGGAGCAGTGTGAACTCAGATGCTGAGTTCCTACTATTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR GCA 72 bp | GTTCATGCTAGGGACACAAAGCCTGGGGCTCTGAAATaGAGTATGACCAGCATGGTTTACTTAATCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VHARDTKPGALK*SMTSMVYLIIQ Trigger: TTGGATGATTAAGTAAACCATGCTGGTCATACTGCATTTCAGAGCCCCAGGCTTTGTGTCCCTAGCATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR GCA 72 bp | TATTCTCCTCGGTTGATGAAATCTGTTGTCACCACCTaGTCTTCCCCACTGTCCTCAGAAAAATTGTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: YSPRLMKSVVTT*SSPLSSEKLCT Trigger: TGTACACAATTTTTCTGAGGACAGTGGGGAAGAGCAGGTGGTGACAACAGATTTCATCAACCGAGGAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR CCA 72 bp | ATAGCAGAAAATGAAGAAAATGCAGGTAGGGTGCCCTaGCACAAACATGTAAGGACAAAGTTGGAGGATACT | + |
|
Preference number: 3 (lower is better) Translates to: IAENEENAGRVP*HKHVRTKLEDT Trigger: AGTATCCTCCAACTTTGTCCTTACATGTTTGTGCCAGGGCACCCTACCTGCATTTTCTTCATTTTCTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCTCTAGTGGAGAAACAGTTCCTCTCATCTCATTAAATAGGTATTTTTCCGCCTGCCTCTTCATCTaGAGTGCTGAGAGAATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLSSGETVPLISLNRYFSACLFI*SAERIK Trigger: TTTAATTCTCTCAGCACTCAAGATGAAGAGGCAGGC...GGAAAAATACCTATTTAATGAGATGAGAGGAACTGTTTCTCCACTAGAGAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCTCTAGTGGAGAAACAGTTCCTCTCATCTCATTAAATAGGTATTTTTCCGAAGACACTAGAAATTaGAGCTGCTCTAAAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: QLSSGETVPLISLNRYFSEDTRN*SCSKEM Trigger: CATTTCTTTAGAGCAGCTCAAATTTCTAGTGTCTTC...GGAAAAATACCTATTTAATGAGATGAGAGGAACTGTTTCTCCACTAGAGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| 3UTR CCA 72 bp | TATTCAATACCAAATAAACGTTCATTACACAGACTGTaGAATGTTACAGCCAACAGCCATATCTATCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YSIPNKRSLHRL*NVTANSHIYQR Trigger: TCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGAACGTTTATTTGGTATTGAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGCCACAGATGACCACCTaGGCCTGGGCAGGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSENDAPHGKNVGRECLAPQMTT*AWAGRA Trigger: TGCTCTGCCTGCCCAGGCCCAGGTGGTCATCTGTGG...CGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCAGCATACTTTCCGTTCCGGTAAATGGGTTCTCCCCACCAAGGCCACACCACAGATGACCACCTaGGCCTGGGCAGGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCQHTFRSGKWVLPTKATPQMTT*AWAGRA Trigger: TGCTCTGCCTGCCCAGGCCCAGGTGGTCATCTGTGG...TGTGGCCTTGGTGGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| 3UTR CAA 72 bp | TTAAAGGCTGGCATGTGTTATGGCCAGCTAGCTCTCTaGCCTGAGCTCGCCCTCGCCCTCTCCTTCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGMCYGQLAL*PELALALSFTP Trigger: GGGAGTGAAGGAGAGGGCGAGGGCGAGCTCAGGCAAGAGAGCTAGCTGGCCATAACACATGCCAGCCTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGAGCAGGGGCTCAAAGTaGTCCCAGTCTTCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSENDAPHGKNVGRECLASRGSK*SQSSRR Trigger: CCTTCGTGAAGACTGGGATCACTTTGAGCCCCTGCT...CGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCACCCCGGTCTGCTTCTaGTGCAGCAGGGCATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFHPHRSVKSLFCLTPVCF*CSRASR Trigger: TCGGGATGCCCTGCTGCAGCAGAAGCAGACCGGGGT...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCCGGTAAATGGGTTCTCCCCACCAAGGCCACAAATCAAGGTCTGTGTCAGCAGGGGCTCAAAGTaGTCCCAGTCTTCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPVNGFSPPRPQIKVCVSRGSK*SQSSRR Trigger: CCTTCGTGAAGACTGGGATCACTTTGAGCCCCTGCT...GACACAGACCTTGATTTGTGGCCTTGGTGGGGAGAACCCATTTACCGGAACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| CDS-3UTR GCA 90 bp | GTACATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGAGCCAGCAGCCAGCCTaGCCTGCTCCAAAAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VHNPGIHGAPVCSYRHYWSQQPA*PAPKGQ Trigger: TTGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCT...CCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| CDS-3UTR CCA 90 bp | TCGGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGATGACCACCTGGGCCTaGGCAGGCAGAGCAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SALRTMLLMARMWEGSVLMTTWA*AGRAIE Trigger: TTCTATTGCTCTGCCTGCCCAGGCCCAGGTGGTCAT...CAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCTGGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACACAGAGTCTCCAATGCTaGCATCCTACGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLERKDGKQSLACTVLTQSLQC*HPTQEG Trigger: TCCCTCCTGCGTAGGATGCCAGCATTGGAGACTCTG...TGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCAGGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGAACTGCCTTCCAGTCTaGAAATCCCAACGGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GSENDAPHGKNVGRECLANCLPV*KSQRGT Trigger: GGTTCCCCGTTGGGATTTCCAGACTGGAAGGCAGTT...CGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGTGGTGAGATCAACCGGTCCTaGGTCTGGGCCAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKDGKQSLACTVLTVLSGEINRS*VWAREI Trigger: AATCTCTCTGGCCCAGACTCAGGACCGGTTGATCTC...ACCACTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAATTATCTGCCTGGTTAAGACACAAGTTATTCCCAGGGCTGCATCAGACACCGGTCTGCTTCTGCTaGAGCAGGGCATCCCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TELSAWLRHKLFPGLHQTPVCFC*SRASRP Trigger: TGGTCGGGATGCCCTGCTGCAGCAGAAGCAGACCGG...TGTCTGATGCAGCCCTGGGAATAACTTGTGTCTTAACCAGGCAGATAATTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGGTAACTATTCCCCCTTCCACAGAGCAGACAGTGTCCACACAATCGCTAGCATCCACAATGGTTaGTGTGTTGCTCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGNYSPFHRADSVHTIASIHNG*CVALQR Trigger: CCTCTGCAGAGCAACACACCAACCATTGTGGATGCT...AGCGATTGTGTGGACACTGTCTGCTCTGTGGAAGGGGGAATAGTTACCTGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | CACTACTGGTGGTCTTGCCAGCATACTTTCCGTTCCGGTAAATGGGTTCTCCCCGATGCACTTCATGTCTaGTGTGAAGGTCTCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYWWSCQHTFRSGKWVLPDALHV*CEGLRA Trigger: TGCCCTGAGACCTTCACACCAGACATGAAGTGCATC...GGGGAGAACCCATTTACCGGAACGGAAAGTATGCTGGCAAGACCACCAGTAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGGTAACTATTCCCCCTTCCACAGAGCAGACAGTGTCCACACAATCGCTCCACACTCATCTCCTTaGAGAAGAGCGTTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPGNYSPFHRADSVHTIAPHSSP*RRALES Trigger: ACTTTCCAACGCTCTTCTGCAAGGAGATGAGTGTGG...AGCGATTGTGTGGACACTGTCTGCTCTGTGGAAGGGGGAATAGTTACCTGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCTTATATACCCCGGTCTaGTTCTGCTGCAGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFHPHRSVKSLFCLLYTPV*FCCSRA Trigger: TGCCCTGCTGCAGCAGAAGCAGACCGGGGTATATAA...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR TCA 90 bp | AAAATTGTGTACATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCGAGATCAACCGGTCCTaGGTCTGGGCCAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KIVYITQAYMALQCVAIGEINRS*VWAREI Trigger: AATCTCTCTGGCCCAGACTCAGGACCGGTTGATCTC...GCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTATGTACACAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGGTAACTATTCCCCCTTCCACAGAGCAGACAGTGTCCACACAATCGCTCTAGTCCTTTGTCTTTaGACAATAGAGAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGNYSPFHRADSVHTIALVLCL*TIESNR Trigger: CCGGTTGCTCTCTATTGTGCAAAGACAAAGGACTAG...AGCGATTGTGTGGACACTGTCTGCTCTGTGGAAGGGGGAATAGTTACCTGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACTGAATTAAAGGCTGGCATGTGTTATGGCCAGCTAGCTCTCTTGCCTAGCCAGCAGCCAGCCTaGCCTGCTCCAAAAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLTELKAGMCYGQLALLPSQQPA*PAPKGQ Trigger: TTGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCT...AGGCAAGAGAGCTAGCTGGCCATAACACATGCCAGCCTTTAATTCAGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATCTTGCCATCCCATTTTaGAGAGGTGATAGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LACTVLTVLSGHLSGFVHLAIPF*RGDRPR Trigger: CCGTGGCCTATCACCTCTCCAAAATGGGATGGCAAG...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGTTACTTCCCATGAAAGCATCCACAATGGTTaGTGTGTTGCTCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSWQECGKGVSCVTSHESIHNG*CVALQR Trigger: CCTCTGCAGAGCAACACACCAACCATTGTGGATGCT...TTCATGGGAAGTAACGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCGATGCACTTCATGTCTaGTGTGAAGGTCTCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFHPHRSVKSLFCLDALHV*CEGLRA Trigger: TGCCCTGAGACCTTCACACCAGACATGAAGTGCATC...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAGAACGATGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGTCAAGGTCTGTGTCATaGTCGTCCAGAATGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: GSENDAPHGKNVGRECLASRSVS*SSRMNI Trigger: TATGTTCATTCTGGACGACCATGACACAGACCTTGA...CGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCATCGTTCTCAGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR TCA 90 bp | GGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGACTTCATGTCTGGTGTaGAGGTCTCAGGGCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKKGWEAVSGLHCTYSSQTSCLV*RSQGNS Trigger: TGAATTGCCCTGAGACCTTCACACCAGACATGAAGT...CTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR TCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCCAATTCGGAGACTTCTaGGGGCATAATACCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SCASVFHPHRSVKSLFCLQFGDF*GHNTQH Trigger: ATGCTGGGTATTATGCCCTCAGAAGTCTCCGAATTG...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | CTTGGCCTGAAACCGATGTCCTGCAATGTCAATTTCATATTCTCCTCGGTTGATATGACCACCTGGGCCTaGGCAGGCAGAGCAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLKPMSCNVNFIFSSVDMTTWA*AGRAIE Trigger: TTCTATTGCTCTGCCTGCCCAGGCCCAGGTGGTCAT...ATCAACCGAGGAGAATATGAAATTGACATTGCAGGACATCGGTTTCAGGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR TCA 90 bp | GTACATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGCTTCCTTGCAGCATTTaGCTTCTGACTCCACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: VHNPGIHGAPVCSYRHYWLPCSI*LLTPQY Trigger: ATATTGTGGAGTCAGAAGTCAAATGCTGCAAGGAAG...CCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR TCA 90 bp | GCTCCAATTTTCACAAAAACAACAGTGCCACTGAAATGTGTGGTGCATTTGGTGAGCTTGGCCTTGGCCTaGAACCGATGTCCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: APIFTKTTVPLKCVVHLVSLALA*NRCPAM Trigger: CATTGCAGGACATCGGTTTCAGGCCAAGGCCAAGCT...CACCAAATGCACCACACATTTCAGTGGCACTGTTGTTTTTGTGAAAATTGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGTTCCGTTCCGGTAAATaGGTTCTCCCCACCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLWNVTANSHIYQREFRSGK*VLPTKA Trigger: GGCCTTGGTGGGGAGAACCCATTTACCGGAACGGAA...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | GCTCCAATTTTCACAAAAACAACAGTGCCACTGAAATGTGTGGTGCATTTGGTGGGTAGAGCTTGGCCTTaGCCTGAAACCGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: APIFTKTTVPLKCVVHLVGRAWP*PETDVL Trigger: CAGGACATCGGTTTCAGGCCAAGGCCAAGCTCTACC...CACCAAATGCACCACACATTTCAGTGGCACTGTTGTTTTTGTGAAAATTGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR TCA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCATCCTCCATATTCATTaGGCATGCCAGTATGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFHPHRSVKSLFCLILHIH*ACQYER Trigger: TCGTTCATACTGGCATGCTCAATGAATATGGAGGAT...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR GCA 90 bp | TGGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCATTGCAGAAAAGGTACTaGAGACTTTCTAACGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WKERMGSSLWPALYLQFSLQKRY*RLSNAS Trigger: CGAGGCGTTAGAAAGTCTGCAGTACCTTTTCTGCAA...TGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | ATATTTCTGTCCAACACTCATCACCTCATTGTAGACATGCAGAGCGTACTCTATCAGAGTCTCCAATGCTaGCATCCTACGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSNTHHLIVDMQSVLYQSLQC*HPTQEG Trigger: TCCCTCCTGCGTAGGATGCCAGCATTGGAGACTCTG...ATAGAGTACGCTCTGCATGTCTACAATGAGGTGATGAGTGTTGGACAGAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGAACTGCCTTCCAGTCTaGAAATCCCAACGGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLWNVTANSHIYQRENCLPV*KSQRGT Trigger: GGTTCCCCGTTGGGATTTCCAGACTGGAAGGCAGTT...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | TCTGTGTCATGGTCGTCCAGAATGAACATAGCAAGGCGCTTATATACCCCGGTCACGCCTCGTCCCCAGTaGAAGTTATTTCAAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSWSSRMNIARRLYTPVTPRPQ*KLFQIL Trigger: CAAAATTTGAAATAACTTCCACTGGGGACGAGGCGT...GACCGGGGTATATAAGCGCCTTGCTATGTTCATTCTGGACGACCATGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | ACTTTCCGTTCCGGTAAATGGGTTCTCCCCACCAAGGCCACAAATCAAGGTCTGGACCTGCTGATCGGTTaGAGAAATCATAAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TFRSGKWVLPTKATNQGLDLLIG*RNHKET Trigger: AGTTTCTTTATGATTTCTCCAACCGATCAGCAGGTC...CAGACCTTGATTTGTGGCCTTGGTGGGGAGAACCCATTTACCGGAACGGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATGCAGCATTTGACTTCTaGCTCCACAATATCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LACTVLTVLSGHLSGFVHAAFDF*LHNIKP Trigger: TGGTTTGATATTGTGGAGTCAGAAGTCAAATGCTGC...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR TCA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATCTTCCTTGCAGCATTTaGCTTCTGACTCCACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LACTVLTVLSGHLSGFVHLPCSI*LLTPQY Trigger: ATATTGTGGAGTCAGAAGTCAAATGCTGCAAGGAAG...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR GCA 90 bp | TGTCCTCAGAAAAATTGTGTACATAACCCAGGCATACATGGCGCTCCAGTGTGTCTAGTCCTTTGTCTTTaGACAATAGAGAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: CPQKNCVHNPGIHGAPVCLVLCL*TIESNR Trigger: CCGGTTGCTCTCTATTGTGCAAAGACAAAGGACTAG...ACACACTGGAGCGCCATGTATGCCTGGGTTATGTACACAATTTTTCTGAGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATACGCCTCGTCCCCAGTaGAAGTTATTTCAAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LACTVLTVLSGHLSGFVHTPRPQ*KLFQIL Trigger: CAAAATTTGAAATAACTTCCACTGGGGACGAGGCGT...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| 3UTR CAA 72 bp | CGATGTCCTGCAATGTCAATTTCATATTCTCCTCGGTaGATGAAATCTGTTGTCACCACCTGCTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCPAMSISYSPR*MKSVVTTCSSP Trigger: TGGGGAAGAGCAGGTGGTGACAACAGATTTCATCAACCGAGGAGAATATGAAATTGACATTGCAGGACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR TCA 90 bp | AAACTTCTCAATTCGGAGACTTCTGAGGGCATAATACCCAGCATTCCGGATTCCATCCTCCATATTCATTaGGCATGCCAGTATGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLNSETSEGIIPSIPDSILHIH*ACQYER Trigger: TCGTTCATACTGGCATGCTCAATGAATATGGAGGAT...GGAATCCGGAATGCTGGGTATTATGCCCTCAGAAGTCTCCGAATTGAGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGTCTGTGTCATGGTCGTCCAGAATGAACATAGCAAGGCGCTTATATACCCAAGAAGGTCCTTGTTaGGTGGAACAAAGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSVSWSSRMNIARRLYTQEGPC*VEQSTL Trigger: CAAAGTACTTTGTTCCACCCAACAAGGACCTTCTTG...GGTATATAAGCGCCTTGCTATGTTCATTCTGGACGACCATGACACAGACCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | CTGGTTAAGACACAAGTTATTCCCAGGGCTGCATCAGACACAAAATCATCTACCTATAGGCACTACTGGTaGTCTTGCCAGCATACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVKTQVIPRAASDTKSSTYRHYW*SCQHTF Trigger: GAAAGTATGCTGGCAAGACCACCAGTAGTGCCTATA...GGTAGATGATTTTGTGTCTGATGCAGCCCTGGGAATAACTTGTGTCTTAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR TCA 90 bp | AGCATTCCGGATTCCATATTTCTGTCCAACACTCATCACCTCATTGTAGACATGGCAGCATTTGACTTCTaGCTCCACAATATCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIPDSIFLSNTHHLIVDMAAFDF*LHNIKP Trigger: TGGTTTGATATTGTGGAGTCAGAAGTCAAATGCTGC...CATGTCTACAATGAGGTGATGAGTGTTGGACAGAAATATGGAATCCGGAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CCA 90 bp | CAGCTCTCTAGTGGAGAAACAGTTCCTCTCATCTCATTAAATAGGTATTTTTCCCAAGAAGGTCCTTGTTaGGTGGAACAAAGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSSGETVPLISLNRYFSQEGPC*VEQSTL Trigger: CAAAGTACTTTGTTCCACCCAACAAGGACCTTCTTG...GGAAAAATACCTATTTAATGAGATGAGAGGAACTGTTTCTCCACTAGAGAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR GCA 90 bp | ATGGTTTGTCTTTCCTTTCAAATACTGGCATACCTGTTTACTCAGCTAAAAACCCTGAAACCGATGTCCTaGAATGTCAATTTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: MVCLSFQILAYLFTQLKTLKPMS*NVNFIF Trigger: GAATATGAAATTGACATTGCAGGACATCGGTTTCAG...GGTTTTTAGCTGAGTAAACAGGTATGCCAGTATTTGAAAGGAAAGACAAACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CCA 90 bp | GAGTCTAGAAGTCATCTGAAGAAATCAATAAGGGATAGCCAAAATATGATTAGCGACCTGCTGATCGGTTaGAGAAATCATAAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESRSHLKKSIRDSQNMISDLLIG*RNHKET Trigger: AGTTTCTTTATGATTTCTCCAACCGATCAGCAGGTC...GCTAATCATATTTTGGCTATCCCTTATTGATTTCTTCAGATGACTTCTAGACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | TGCTCCTCATGGCAAGAATGTGGGAAGGGAGTGTCTTGCGTTACTTCCCATGAACGAGGGCCAATCAGATaGAGGGCTGTGTATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSWQECGKGVSCVTSHERGPIR*RAVYFQ Trigger: CTGGAAATACACAGCCCTCAATCTGATTGGCCCTCG...TTCATGGGAAGTAACGCAAGACACTCCCTTCCCACATTCTTGCCATGAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | ATGGGTTCTCCCCACCAAGGCCACAAATCAAGGTCTGTGTCATGGTCGTCCAGAGCTTCCTTGCAGCATTaGACTTCTGACTCCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: MGSPHQGHKSRSVSWSSRASLQH*TSDSTI Trigger: TATTGTGGAGTCAGAAGTCAAATGCTGCAAGGAAGC...TCTGGACGACCATGACACAGACCTTGATTTGTGGCCTTGGTGGGGAGAACCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCTGCACTGTACTTACAGTTCTCAGTGGTCATCTGTCTGGCTTTGTTCATCCCACACTCATCTCCTaGCAGAAGAGCGTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LACTVLTVLSGHLSGFVHPTLIS*QKSVGK Trigger: CTTTCCAACGCTCTTCTGCAAGGAGATGAGTGTGGG...ATGAACAAAGCCAGACAGATGACCACTGAGAACTGTAAGTACAGTGCAGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | GGAAAGAAAGGATGGGAAGCAGTCTCTGGCCTGCACTGTACTTACAGTTCTCAGTCCTGGGCTAGTCCTTaGTCTTTGCACAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKKGWEAVSGLHCTYSSQSWASP*SLHNRE Trigger: CTCTCTATTGTGCAAAGACAAAGGACTAGCCCAGGA...CTGAGAACTGTAAGTACAGTGCAGGCCAGAGACTGCTTCCCATCCTTTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | ATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCACTACTGGTGGTGCAAGAAGGTCCTTGTaGGGTGGAACAAAGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITQAYMALQCVAIGTTGGARRSL*GGTKYF Trigger: AAAGTACTTTGTTCCACCCAACAAGGACCTTCTTGC...ACCACCAGTAGTGCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | AGCTGTGCATCTGTATTCCACCCCCATAGGTCAGTTAAGAGCCTGTTCTGTCTCGCTTCCTTGCAGCATTaGACTTCTGACTCCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: SCASVFHPHRSVKSLFCLASLQH*TSDSTI Trigger: TATTGTGGAGTCAGAAGTCAAATGCTGCAAGGAAGC...GAGACAGAACAGGCTCTTAACTGACCTATGGGGGTGGAATACAGATGCACAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | AAAATTGTGTACATAACCCAGGCATACATGGCGCTCCAGTGTGTAGCTATAGGCGCTAGTCCTTTGTCTTaGCACAATAGAGAGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: KIVYITQAYMALQCVAIGASPLS*HNREQP Trigger: CGGTTGCTCTCTATTGTGCAAAGACAAAGGACTAGC...GCCTATAGCTACACACTGGAGCGCCATGTATGCCTGGGTTATGTACACAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGAAAAATTGTGTACATAACCCAGGCATACATGGCGCTCCAGTGTGTATCCTGGGCTAGTCCTTaGTCTTTGCACAATAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLRKIVYITQAYMALQCVSWASP*SLHNRE Trigger: CTCTCTATTGTGCAAAGACAAAGGACTAGCCCAGGA...TACACACTGGAGCGCCATGTATGCCTGGGTTATGTACACAATTTTTCTGAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | AACTGTCACCACACCCGAAATCTCAGTACTCAAGAGACTAATAAGCAAGAGGATCAGCATCCACAATGGTaGGTGTGTTGCTCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NCHHTRNLSTQETNKQEDQHPQW*VCCSAE Trigger: CTCTGCAGAGCAACACACCAACCATTGTGGATGCTG...ATCCTCTTGCTTATTAGTCTCTTGAGTACTGAGATTTCGGGTGTGGTGACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | AACTGTCACCACACCCGAAATCTCAGTACTCAAGAGACTAATAAGCAAGAGGATGCACTACTGGTGGTCTaGCCAGCATACTTTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCHHTRNLSTQETNKQEDALLVV*PAYFPF Trigger: GAACGGAAAGTATGCTGGCAAGACCACCAGTAGTGC...ATCCTCTTGCTTATTAGTCTCTTGAGTACTGAGATTTCGGGTGTGGTGACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS GCA 90 bp | ACGATGTGGCCTACAGGTACATCAAGGTCATTGCAGAAAAGGTACTaGAGACTTTCTAACGCCTCGTCCCCAGTGGAAGTTATTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TMWPTGTSRSLQKRY*RLSNASSPVEVISN Trigger: ATTTGAAATAACTTCCACTGGGGACGAGGCGTTAGAAAGTCTGCAGTACCTTTTCTGCAATGACCTTGATGTACCTGTAGGCCACATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | CTTGGCCTGAAACCGATGTCCTGCAATGTCAATTTCATATTCTCCTCGGTTGATTCTTGCAGAAGAGCGTaGGAAAGTGATCTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGLKPMSCNVNFIFSSVDSCRRA*ESDLES Trigger: TGACTCCAGATCACTTTCCAACGCTCTTCTGCAAGA...ATCAACCGAGGAGAATATGAAATTGACATTGCAGGACATCGGTTTCAGGCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144377.2 |
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| CDS-3UTR CAA 90 bp | TCATTACACAGACTGTGGAATGTTACAGCCAACAGCCATATCTATCAGAGAGAGGCTAGTCCTTTGTCTTaGCACAATAGAGAGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: SLHRLWNVTANSHIYQREASPLS*HNREQP Trigger: CGGTTGCTCTCTATTGTGCAAAGACAAAGGACTAGC...CTCTCTCTGATAGATATGGCTGTTGGCTGTAACATTCCACAGTCTGTGTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | AACTGTCACCACACCCGAAATCTCAGTACTCAAGAGACTAATAAGCAAGAGGATGCAAGAAGGTCCTTGTaGGGTGGAACAAAGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: NCHHTRNLSTQETNKQEDARRSL*GGTKYF Trigger: AAAGTACTTTGTTCCACCCAACAAGGACCTTCTTGC...ATCCTCTTGCTTATTAGTCTCTTGAGTACTGAGATTTCGGGTGTGGTGACAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | ATGGTTTGTCTTTCCTTTCAAATACTGGCATACCTGTTTACTCAGCTAAAAACCCGAGGGCCAATCAGATaGAGGGCTGTGTATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVCLSFQILAYLFTQLKTRGPIR*RAVYFQ Trigger: CTGGAAATACACAGCCCTCAATCTGATTGGCCCTCG...GGTTTTTAGCTGAGTAAACAGGTATGCCAGTATTTGAAAGGAAAGACAAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS-3UTR CAA 90 bp | GCTCCAATTTTCACAAAAACAACAGTGCCACTGAAATGTGTGGTGCATTTGGTGTCATATTCTCCTCGGTaGATGAAATCTGTTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: APIFTKTTVPLKCVVHLVSYSPR*MKSVVT Trigger: GGTGACAACAGATTTCATCAACCGAGGAGAATATGA...CACCAAATGCACCACACATTTCAGTGGCACTGTTGTTTTTGTGAAAATTGGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039333.10 |
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| CDS GCA 72 bp | CCTACAGGTACATCAAGGTCATTGCAGAAAAGGTACTaGAGACTTTCTAACGCCTCGTCCCCAGTGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PTGTSRSLQKRY*RLSNASSPVEV Trigger: AACTTCCACTGGGGACGAGGCGTTAGAAAGTCTGCAGTACCTTTTCTGCAATGACCTTGATGTACCTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039333.10 ENSMUST00000144377.2 |
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