Pregenerated sensors for PDPK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024122Ensembl transcript IDs: ENSMUST00000052462.13, ENSMUST00000102927.10, ENSMUST00000115407.9, ENSMUST00000115409.9, ENSMUST00000115411.8, ENSMUST00000128997.2, ENSMUST00000144533.8, ENSMUST00000154982.2
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTaGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LAGGLEASWVAAEPR*GRYPGSNRQPGRRP Trigger: TGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | TGTTCTCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTaGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGC | + |
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Preference number: 1 (lower is better) Translates to: CSPRDGWQVVWKRPG*RPSRAGAGILAAIG Trigger: GCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGAGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | TCTATGTTCTCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTaGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: SMFSTRWLAGGLEAS*VAAEPRWGRYPGSN Trigger: ATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGAGAACATAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | TGCAAGATTTCTGCCATCTATGTTCTCCACGAGATGGCTGGCAGGTaGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CKISAIYVLHEMAGR*SGSVLGGGRAALGQ Trigger: CTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGAGAACATAGATGGCAGAAATCTTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | GAGGGGCGGGTGATGCCAAATCTGGCCACTGGTCTGGGCAAAAGCTaGGCTACCGTGCAAGGAGCTGGGTCTCCATGGCCACAGCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: EGRVMPNLATGLGKS*ATVQGAGSPWPQQC Trigger: GCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCCAGCTTTTGCCCAGACCAGTGGCCAGATTTGGCATCACCCGCCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | GGCAGCCCGGCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTaGTCTGGTACTGCTGCCTCCAAACCTCCTGGATCTTTCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: GSPAAGHVTAQQHLD*SGTAASKPPGSFCT Trigger: GGTGCAGAAAGATCCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| 3UTR GCA 90 bp | AGCTGGGCTACCGTGCAAGGAGCTGGGTCTCCATGGCCACAGCAGTaGATGGAAGCCACCACAGAGCACAGAGAGCAAGCAAAGCGACCC | + |
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Preference number: 1 (lower is better) Translates to: SWATVQGAGSPWPQQ*MEATTEHREQAKRP Trigger: GGGTCGCTTTGCTTGCTCTCTGTGCTCTGTGGTGGCTTCCATGCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | AGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACGTCACTaGACAGCAGCATCTGGATTGCTCTGGTACTGCTGCCTCCAAACC | + |
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Preference number: 1 (lower is better) Translates to: RYPGSNRQPGRRPRH*TAASGLLWYCCLQT Trigger: GGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| 3UTR TCA 90 bp | GGTAGAGGCAGGCATGCAGTTCCTGTGGATGCTAAGAGGGGCGGGTaGTGCCAAATCTGGCCACTGGTCTGGGCAAAAGCTGGGCTACCG | + |
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Preference number: 1 (lower is better) Translates to: GRGRHAVPVDAKRGG*CQIWPLVWAKAGLP Trigger: CGGTAGCCCAGCTTTTGCCCAGACCAGTGGCCAGATTTGGCATCACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | TTCCTGTGGATGCTAAGAGGGGCGGGTGATGCCAAATCTGGCCACTaGTCTGGGCAAAAGCTGGGCTACCGTGCAAGGAGCTGGGTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: FLWMLRGAGDAKSGH*SGQKLGYRARSWVS Trigger: GGAGACCCAGCTCCTTGCACGGTAGCCCAGCTTTTGCCCAGACCAGTGGCCAGATTTGGCATCACCCGCCCCTCTTAGCATCCACAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | GTGTGTATCAGGTGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTaGATGCTAAGAGGGGCGGGTGATGCCAAATCTGGCCACTGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: VCIRWGKVEAGMQFL*MLRGAGDAKSGHWS Trigger: AGACCAGTGGCCAGATTTGGCATCACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCACCTGATACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR TCA 90 bp | GACAGCATCCTAGGCCATACCTGTTCTGTGGGTTCTACTGGCAAGTaGGGTCCTGCTCCTTGCTCACCTGAAGCTCTTCTCACACGATCT | + |
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Preference number: 1 (lower is better) Translates to: DSILGHTCSVGSTGK*GPAPCSPEALLTRS Trigger: AGATCGTGTGAGAAGAGCTTCAGGTGAGCAAGGAGCAGGACCTCACTTGCCAGTAGAACCCACAGAACAGGTATGGCCTAGGATGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR TCA 90 bp | CTGGGAGTCTGTGCCACACAACTGTCGGCAAGGTTACTTCAAGCATaGATCACAAACACTAGGGTGGCCCAAAGAGAGCTGCAGCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: LGVCATQLSARLLQA*ITNTRVAQRELQQL Trigger: TAACTGCTGCAGCTCTCTTTGGGCCACCCTAGTGTTTGTGATTCATGCTTGAAGTAACCTTGCCGACAGTTGTGTGGCACAGACTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR TCA 90 bp | TCTTCAAAAACCAGGAGAAATGAGTGCCCACTTTCACTCTCAGGCTaGCAGCATCCTAGGCCATACCTGTTCTGTGGGTTCTACTGGCAA | + |
|
Preference number: 1 (lower is better) Translates to: SSKTRRNECPLSLSG*QHPRPYLFCGFYWQ Trigger: TTGCCAGTAGAACCCACAGAACAGGTATGGCCTAGGATGCTGTCAGCCTGAGAGTGAAAGTGGGCACTCATTTCTCCTGGTTTTTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | TGGAAGCAGTGGCCCAAGCTGGATTCTCTACAGTACCTCCAGCCTTaGCCAGGTTCAGGACAGGATTCTGTACCTGATAATAATCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: WKQWPKLDSLQYLQP*PGSGQDSVPDNNLV Trigger: AACTAGATTATTATCAGGTACAGAATCCTGTCCTGAACCTGGGCAAGGCTGGAGGTACTGTAGAGAATCCAGCTTGGGCCACTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | CTCTGCAAGAAATGCCAAAAGAAGTGTCCCATTACTGGCAAAGAATaGCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTTCCTGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: LCKKCQKKCPITGKE*QHRQAQIKRAVPVS Trigger: GCTCACAGGAACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGGGACACTTCTTTTGGCATTTCTTGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACGAGTTGTACAAACTaGCATCCACATCCTGTCCTACAAAGTAAGGCACCTTCACACAGG | + |
|
Preference number: 1 (lower is better) Translates to: THTHTHTHTHTSCTN*HPHPVLQSKAPSHR Trigger: CCTGTGTGAAGGTGCCTTACTTTGTAGGACAGGATGTGGATGTCAGTTTGTACAACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | GAAATGGCAAAATTGTTGCTGCCATTGGGACATAGGAGTCTGAGGTaGTACTGTGAGCAGATGGGAGATGCCTACTTTTCTCCACTAGAC | + |
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Preference number: 1 (lower is better) Translates to: EMAKLLLPLGHRSLR*YCEQMGDAYFSPLD Trigger: GTCTAGTGGAGAAAAGTAGGCATCTCCCATCTGCTCACAGTAGCACCTCAGACTCCTATGTCCCAATGGCAGCAACAATTTTGCCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | CAAAGAGAGGTACAGCCAAGTCCCTCAAAAGCACTCTGCAAGAAATaGCAAAAGAAGTGTCCCATTACTGGCAAAGAATGCCAGCATAGG | + |
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Preference number: 1 (lower is better) Translates to: QREVQPSPSKALCKK*QKKCPITGKECQHR Trigger: CCTATGCTGGCATTCTTTGCCAGTAATGGGACACTTCTTTTGGCATTTCTTGCAGAGTGCTTTTGAGGGACTTGGCTGTACCTCTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | TCAGGGCCCTTGTCTTACCTTCTACCCACGAGGTGCTACACCCACTaGCATCAGCACCAGTTTATGTTGGGTTTTGCATTAAAACAAATA | + |
|
Preference number: 1 (lower is better) Translates to: SGPLSYLLPTRCYTH*HQHQFMLGFALKQI Trigger: TATTTGTTTTAATGCAAAACCCAACATAAACTGGTGCTGATGCCAGTGGGTGTAGCACCTCGTGGGTAGAAGGTAAGACAAGGGCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
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| 3UTR TCA 90 bp | GAACAGGGTAACCTCTGTTGTTGTGTGTGTTTGGGGGCGCCTATGTaGAAGTCAATAGAAATGGCAAAATTGTTGCTGCCATTGGGACAT | + |
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Preference number: 1 (lower is better) Translates to: EQGNLCCCVCLGAPM*KSIEMAKLLLPLGH Trigger: ATGTCCCAATGGCAGCAACAATTTTGCCATTTCTATTGACTTTCACATAGGCGCCCCCAAACACACACAACAACAGAGGTTACCCTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR GCA 90 bp | TATCCTAGTCAAAGAGAGGTACAGCCAAGTCCCTCAAAAGCACTCTaGAAGAAATGCCAAAAGAAGTGTCCCATTACTGGCAAAGAATGC | + |
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Preference number: 1 (lower is better) Translates to: YPSQREVQPSPSKAL*KKCQKKCPITGKEC Trigger: GCATTCTTTGCCAGTAATGGGACACTTCTTTTGGCATTTCTTGCAGAGTGCTTTTGAGGGACTTGGCTGTACCTCTCTTTGACTAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CCA 90 bp | AACAAAGAGTTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTaGTCTCTGAATGACGGGCCTTCCTTTATTCTTTTGCTTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: NKELGRTASTSKCSQ*SLNDGPSFILLLSE Trigger: TTCTGAAAGCAAAAGAATAAAGGAAGGCCCGTCATTCAGAGACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAACTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGTCTCCACGAGATGGCTaGCAGGTGGTCTGGAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: STRWLAGGLEASWVAAEPSPRDG*QVVWKR Trigger: ACGCTTCCAGACCACCTGCCAGCCATCTCGTGGAGA...CGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTGGATGCTAAGAGGGGCGGGTGGCTGGCAGGTGGTCTaGAAGCGTCCTGGGTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: WGKVEAGMQFLWMLRGAGGWQVV*KRPGWR Trigger: CCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCC...ACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CAA 90 bp | AGGCAGCCCGGCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATaGCTCTGGTACTGCTGCCTCCAAACCTCCTGGATCTTTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RQPGRRPRHCTAASG*LWYCCLQTSWIFLH Trigger: GTGCAGAAAGATCCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGGCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACGTCACTGCCCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: WGRYPGSNRQPGRRPRHCPPGSF*TTCEHS Trigger: GGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGG...GCAGTGACGTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| 3UTR-3UTR CCA 90 bp | CCATTACTGGCAAAGAATGCCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTTCGGTCTGGAAGCGTCCTaGGTGGCGGCCGAGCCGCGC | + |
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Preference number: 2 (lower is better) Translates to: PLLAKNASIGRLRLRGLFGLEAS*VAAEPR Trigger: GCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC...GAACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR TCA 90 bp | CCGGCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTTTTCTGCACCACTTGTaGGCATTCCCGCTTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: PAAGHVTAQQHLDCSGTAFLHHL*AFPLGS Trigger: GGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAA...AGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| 3UTR-3UTR CCA 90 bp | AGTACCTCCAGCCTTGCCCAGGTTCAGGACAGGATTCTGTACCTGATAATAATCGCGGCCGAGCCGCGCTaGGGCAGGTATCCTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: STSSLAQVQDRILYLIIIAAEPR*GRYPGS Trigger: GCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGC...GATTATTATCAGGTACAGAATCCTGTCCTGAACCTGGGCAAGGCTGGAGGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTACAGCCAAGTCCCTCAAAAGCACTCTGCAAGAAATGCCAAAAGAAGTGTCGCGGCCGAGCCGCGCTaGGGCAGGTATCCTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RYSQVPQKHSARNAKRSVAAEPR*GRYPGS Trigger: GCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGC...GACACTTCTTTTGGCATTTCTTGCAGAGTGCTTTTGAGGGACTTGGCTGTACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGTATTTCTCTCTCTCCTTACATACATCCCAAATTTACTGTTTCACACACTGGAAGCGTCCTGGGTaGCGGCCGAGCCGCGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TGYFSLSLHTSQIYCFTHWKRPG*RPSRAG Trigger: CCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCA...GTGTGTGAAACAGTAAATTTGGGATGTATGTAAGGAGAGAGAGAAATACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACTGCCCAGCTGGAGCACAGAAAAACAGGTGGAATTGACCCATTCAAGCTAATGTTCTCCACGAGATaGCTGGCAGGTGGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PTAQLEHRKTGGIDPFKLMFSTR*LAGGLE Trigger: TTCCAGACCACCTGCCAGCCATCTCGTGGAGAACAT...TAGCTTGAATGGGTCAATTCCACCTGTTTTTCTGTGCTCCAGCTGGGCAGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTAGGTAGGAGAAGCCAGAGAACAGTCTTCAACTTTCTTTCCATCCTTGCCGGAGCTGGGTCTCCATaGCCACAGCAGTGCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: YLGRRSQRTVFNFLSILAGAGSP*PQQCME Trigger: TTCCATGCACTGCTGTGGCCATGGAGACCCAGCTCC...GGCAAGGATGGAAAGAAAGTTGAAGACTGTTCTCTGGCTTCTCCTACCTAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAACACTAGGGTGGCCCAAAGAGAGCTGCAGCAGTTAACGTTTCTATCAGTTCTTTCACTCTCAGGCTaGCAGCATCCTAGGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: TNTRVAQRELQQLTFLSVLSLSG*QHPRPY Trigger: GTATGGCCTAGGATGCTGTCAGCCTGAGAGTGAAAG...AACTGATAGAAACGTTAACTGCTGCAGCTCTCTTTGGGCCACCCTAGTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGTGGTAGAGCACTCGCTTAGCAATCCTGAACCTCACTATTCAATTCCCTGCTTTCCCTGTGTCTaGATGCACCTGAGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSVVEHSLSNPEPHYSIPCFPCV*MHLRDR Trigger: CCTGTCTCTCAGGTGCATGCAGACACAGGGAAAGCA...GGGAATTGAATAGTGAGGTTCAGGATTGCTAAGCGAGTGCTCTACCACTGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR TCA 90 bp | ACATCAGTGGTAGAGCACTCGCTTAGCAATCCTGAACCTCACTATTCAATTCCCCCACAGAGTGGTGGCTaGCTTTTCATCCTCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: TSVVEHSLSNPEPHYSIPPQSGG*LFILTL Trigger: TAGAGTGAGGATGAAAAGTCAGCCACCACTCTGTGG...GGGAATTGAATAGTGAGGTTCAGGATTGCTAAGCGAGTGCTCTACCACTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGCACAGAAAAACAGGTGGAATTGACCCATTCAAGCTAAGTTTCATCTGTTCTGAGGTGCTACTGTaGGCAGATGGGAGATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: LEHRKTGGIDPFKLSFICSEVLL*ADGRCL Trigger: TAGGCATCTCCCATCTGCTCACAGTAGCACCTCAGA...ACAGATGAAACTTAGCTTGAATGGGTCAATTCCACCTGTTTTTCTGTGCTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR TCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACCTTGGGCAGTCATGGTaGCCACCCACTACTAATAGC | + |
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Preference number: 2 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHLGQSW*PPTTNS Trigger: GCTATTAGTAGTGGGTGGTCACCATGACTGCCCAAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCACAGAAAAACAGGTGGAATTGACCCATTCAAGCTAAGTTTCATCTGTGCCATACCTGTTCTGTaGGTTCTACTGGCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LEHRKTGGIDPFKLSFICAIPVL*VLLASE Trigger: CTCACTTGCCAGTAGAACCCACAGAACAGGTATGGC...ACAGATGAAACTTAGCTTGAATGGGTCAATTCCACCTGTTTTTCTGTGCTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR CAA 90 bp | CTACCCACGAGGTGCTACACCCACTGGCATCAGCACCAGTTTATGTaGGGTTTTGCATTAAAACAAATAGAAACGTGTATAGGAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: LPTRCYTHWHQHQFM*GFALKQIETCIGVS Trigger: AGATACTCCTATACACGTTTCTATTTGTTTTAATGCAAAACCCAACATAAACTGGTGCTGATGCCAGTGGGTGTAGCACCTCGTGGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTATTTCTCTCTCTCCTTACATACATCCCAAATTTACTGTTTCACACACACTCACCTAAACCTGTaGAGAAACTCCAAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TGYFSLSLHTSQIYCFTHTHLNL*RNSKEG Trigger: GCCCTCCTTGGAGTTTCTGCACAGGTTTAGGTGAGT...GTGTGTGAAACAGTAAATTTGGGATGTATGTAAGGAGAGAGAGAAATACCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR GCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACATTACTGGCAAAGAATaGCAGCATAGGCAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHITGKE*QHRQAQ Trigger: CTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACGTTGTTGTGTGTGTTTaGGGGCGCCTATGTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHVVVCV*GRLCES Trigger: ACTTTCACATAGGCGCCCCCAAACACACACAACAAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGACACATGATTTCTAGAGGTACTAACAGGGTATTTCTCTCTCTCCTTACAAGGACAAAGGTGACCTaGGAAGAGATCAGCTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LGHMISRGTNRVFLSLLTRTKVT*EEISCC Trigger: ACAACAGCTGATCTCTTCCCAGGTCACCTTTGTCCT...TGTAAGGAGAGAGAGAAATACCCTGTTAGTACCTCTAGAAATCATGTGTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGCACAGAAAAACAGGTGGAATTGACCCATTCAAGCTAAGTTTCATCTGTGCACTCTGCAAGAAATaGCAAAAGAAGTGTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: LEHRKTGGIDPFKLSFICALCKK*QKKCPI Trigger: AATGGGACACTTCTTTTGGCATTTCTTGCAGAGTGC...ACAGATGAAACTTAGCTTGAATGGGTCAATTCCACCTGTTTTTCTGTGCTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAGTGGTAGAGCACTCGCTTAGCAATCCTGAACCTCACTATTCAATTCCCGGCTCTAAGGATGACTaGAAAAATGAAGGTGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: TSVVEHSLSNPEPHYSIPGSKDD*KNEGDL Trigger: TAAATCACCTTCATTTTTCCAGTCATCCTTAGAGCC...GGGAATTGAATAGTGAGGTTCAGGATTGCTAAGCGAGTGCTCTACCACTGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CAA 90 bp | TCATCTGTGTGGTTTCTTTTCCAAGAAGAGCTTTGCTATTCTGCTTaGCTACTGATTCCCAAATGGCCCAAATGCATTTCTGAGTCTATA | + |
|
Preference number: 2 (lower is better) Translates to: SSVWFLFQEELCYSA*LLIPKWPKCISESI Trigger: TATAGACTCAGAAATGCATTTGGGCCATTTGGGAATCAGTAGCAAAGCAGAATAGCAAAGCTCTTCTTGGAAAAGAAACCACACAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR CAA 90 bp | AAATGTTCACAGTGGTCTCTGAATGACGGGCCTTCCTTTATTCTTTaGCTTTCAGAAAACATACACTTCTTTAAGAAAGCACACAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: KCSQWSLNDGPSFIL*LSENIHFFKKAHNY Trigger: GTAATTGTGTGCTTTCTTAAAGAAGTGTATGTTTTCTGAAAGCAAAAGAATAAAGGAAGGCCCGTCATTCAGAGACCACTGTGAACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTaGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLEASWVAAEPR*GRYPGSNRQPG Trigger: GCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | CGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTaGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RDGWQVVWKRPG*RPSRAGAGILA Trigger: TGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | TCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTaGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: STRWLAGGLEAS*VAAEPRWGRYP Trigger: AGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | TCTGCCATCTATGTTCTCCACGAGATGGCTGGCAGGTaGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SAIYVLHEMAGR*SGSVLGGGRAA Trigger: CGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGAGAACATAGATGGCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | GGCAGCAATAGGCAGCCCGGCCGCAGGCCACGTCACTaGACAGCAGCATCTGGATTGCTCTGGTACTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSNRQPGRRPRH*TAASGLLWYCC Trigger: GCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGGCTGCCTATTGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| 3UTR GCA 72 bp | ATCTGGCCACTGGTCTGGGCAAAAGCTGGGCTACCGTaGAAGGAGCTGGGTCTCCATGGCCACAGCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IWPLVWAKAGLP*KELGLHGHSSA Trigger: TGCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCCAGCTTTTGCCCAGACCAGTGGCCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | TGGTCTGGGCAAAAGCTGGGCTACCGTGCAAGGAGCTaGGTCTCCATGGCCACAGCAGTGCATGGAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: WSGQKLGYRARS*VSMATAVHGSH Trigger: GTGGCTTCCATGCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCCAGCTTTTGCCCAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | GCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTaGTCTGGTACTGCTGCCTCCAAACCTCCTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: AAGHVTAQQHLD*SGTAASKPPGS Trigger: AGATCCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| 3UTR CCA 72 bp | AGGTGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTaGATGCTAAGAGGGGCGGGTGATGCCAAATCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RWGKVEAGMQFL*MLRGAGDAKSG Trigger: GCCAGATTTGGCATCACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | CGTCCCTCAGTCACAGCAGGAGCTGTGTGTATCAGGTaGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPSVTAGAVCIR*GKVEAGMQFLW Trigger: CCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCACCTGATACACACAGCTCCTGCTGTGACTGAGGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | AGGCATGCAGTTCCTGTGGATGCTAAGAGGGGCGGGTaGTGCCAAATCTGGCCACTGGTCTGGGCAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RHAVPVDAKRGG*CQIWPLVWAKA Trigger: AGCTTTTGCCCAGACCAGTGGCCAGATTTGGCATCACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | CTAGGCCATACCTGTTCTGTGGGTTCTACTGGCAAGTaGGGTCCTGCTCCTTGCTCACCTGAAGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGHTCSVGSTGK*GPAPCSPEALL Trigger: GAGAAGAGCTTCAGGTGAGCAAGGAGCAGGACCTCACTTGCCAGTAGAACCCACAGAACAGGTATGGCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | ATTACCTACGGCCCCCTTGCTGGTACTGGGAGTCTGTaGCACACAACTGTCGGCAAGGTTACTTCAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ITYGPLAGTGSL*HTTVGKVTSSM Trigger: CATGCTTGAAGTAACCTTGCCGACAGTTGTGTGGCACAGACTCCCAGTACCAGCAAGGGGGCCGTAGGTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | CACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTaGCTCCAAACCTCCTGGATCTTTCTGCACCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: HCTAASGLLWYC*LQTSWIFLHHL Trigger: CAAGTGGTGCAGAAAGATCCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| 3UTR GCA 72 bp | AGCCAAGCCTCAGTCCACTGCTCCCCTGTAGTTAAATaGCCTCAAAGATGCTTTCCCTGTGTCTGCATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQASVHCSPVVK*PQRCFPCVCMH Trigger: GTGCATGCAGACACAGGGAAAGCATCTTTGAGGGCATTTAACTACAGGGGAGCAGTGGACTGAGGCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCTAGGTAGGAGAAGCCAGAGAACAGTCTTCAACTTTCTTTCCATCCTTGCCGCCCAGGAGGTAGTGTaGCTCTCCAGGGAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YLGRRSQRTVFNFLSILAAQEVV*LSREGS Trigger: GCTTCCTTCCCTGGAGAGCAACACTACCTCCTGGGC...GGCAAGGATGGAAAGAAAGTTGAAGACTGTTCTCTGGCTTCTCCTACCTAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAACAAAGAGTTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTGGTCGCCCAGGAGGTAGTGTaGCTCTCCAGGGAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LEQRVRENSIYIQMFTVVAQEVV*LSREGS Trigger: GCTTCCTTCCCTGGAGAGCAACACTACCTCCTGGGC...GACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAACTCTTTGTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | TGGCCCAAGCTGGATTCTCTACAGTACCTCCAGCCTTaGCCAGGTTCAGGACAGGATTCTGTACCTGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: WPKLDSLQYLQP*PGSGQDSVPDN Trigger: ATTATCAGGTACAGAATCCTGTCCTGAACCTGGGCAAGGCTGGAGGTACTGTAGAGAATCCAGCTTGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | TTTAAGAAAGCACACAATTACCTACGGCCCCCTTGCTaGTACTGGGAGTCTGTGCCACACAACTGTCGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FKKAHNYLRPPC*YWESVPHNCRQ Trigger: TTGCCGACAGTTGTGTGGCACAGACTCCCAGTACCAGCAAGGGGGCCGTAGGTAATTGTGTGCTTTCTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCATGGTGACCACCCACTACTAATAGCTCAGCTGAACTCTGATTTTAGAGGTCCAGCTGAGAAGTGTTaGCCCACAGCATCGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHGDHPLLIAQLNSDFRGPAEKC*PTASQV Trigger: CACCTGCGATGCTGTGGGCAAACACTTCTCAGCTGG...ACCTCTAAAATCAGAGTTCAGCTGAGCTATTAGTAGTGGGTGGTCACCATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | TGGCAAAATTGTTGCTGCCATTGGGACATAGGAGTCTaGGGTGCTACTGTGAGCAGATGGGAGATGCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: WQNCCCHWDIGV*GATVSRWEMPT Trigger: AGTAGGCATCTCCCATCTGCTCACAGTAGCACCTCAGACTCCTATGTCCCAATGGCAGCAACAATTTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | TGTGCCACACAACTGTCGGCAAGGTTACTTCAAGCATaGATCACAAACACTAGGGTGGCCCAAAGAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CATQLSARLLQA*ITNTRVAQREL Trigger: CAGCTCTCTTTGGGCCACCCTAGTGTTTGTGATTCATGCTTGAAGTAACCTTGCCGACAGTTGTGTGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | CATATTCAGAGTTGCTGTGGCCTCCCAAGTCTCAGATaGACACCCCAGGTCTATAGAACAATGGGGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HIQSCCGLPSLR*TPQVYRTMGRS Trigger: GCTTCTCCCCATTGTTCTATAGACCTGGGGTGTTCATCTGAGACTTGGGAGGCCACAGCAACTCTGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR GCA 72 bp | AGTCTAAATAAAATCCCTGTTCCCACCCAGCAACCCTaGCACAGAGTGGTGGCTGACTTTTCATCCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SLNKIPVPTQQP*HRVVADFSSSL Trigger: GAGTGAGGATGAAAAGTCAGCCACCACTCTGTGGCAGGGTTGCTGGGTGGGAACAGGGATTTTATTTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | AGCTACTATCTGATTTGGGTGGGCACTACAGTTCCGTaGAGCACTGCAGCGCACAAGAAGGTTTACATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SYYLIWVGTTVP*STAAHKKVYIS Trigger: GCTTATGTAAACCTTCTTGTGCGCTGCAGTGCTGCACGGAACTGTAGTGCCCACCCAAATCAGATAGTAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR CCA 72 bp | AGCAACAAAGGACTCTCCCATATACAGCCAGCTTTGTaGTCTAATTCAAGCCAAGCCTCAGTCCACTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SNKGLSHIQPAL*SNSSQASVHCS Trigger: GGAGCAGTGGACTGAGGCTTGGCTTGAATTAGACCACAAAGCTGGCTGTATATGGGAGAGTCCTTTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | ATCAAGGAAAAGGGGGCAGTAAGGACAAAGGTGACCTaGGAAGAGATCAGCTGTTGTAGCTTGGGCAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IKEKGAVRTKVT*EEISCCSLGSH Trigger: ATGACTGCCCAAGCTACAACAGCTGATCTCTTCCCAGGTCACCTTTGTCCTTACTGCCCCCTTTTCCTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | CACTGCAGCGCACAAGAAGGTTTACATAAGCATCAGTaGGGATACCCATCCTTGGCAATGACAAAGCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HCSAQEGLHKHQ*GYPSLAMTKPS Trigger: GCTAGGCTTTGTCATTGCCAAGGATGGGTATCCCCACTGATGCTTATGTAAACCTTCTTGTGCGCTGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR TCA 72 bp | GCCCTCAAAGATGCTTTCCCTGTGTCTGCATGCACCTaGGAGACAGGAAGCCACTCTTACTTACATGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: ALKDAFPVSACT*ETGSHSYLHVQ Trigger: TTGTACATGTAAGTAAGAGTGGCTTCCTGTCTCTCAGGTGCATGCAGACACAGGGAAAGCATCTTTGAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | TCCTTTCCAGGCAAGGCCCACACTTTATGGAGTAGGTaGCCAGGCAACATGAGAAGGCTTCTAGATTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SFPGKAHTLWSR*PGNMRRLLDFQ Trigger: TTGAAAATCTAGAAGCCTTCTCATGTTGCCTGGTCACCTACTCCATAAAGTGTGGGCCTTGCCTGGAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | AAATTGTTGCTGCCATTGGGACATAGGAGTCTGAGGTaGTACTGTGAGCAGATGGGAGATGCCTACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLLLPLGHRSLR*YCEQMGDAYFS Trigger: AGAAAAGTAGGCATCTCCCATCTGCTCACAGTAGCACCTCAGACTCCTATGTCCCAATGGCAGCAACAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR GCA 72 bp | GTAGTTAAATGCCCTCAAAGATGCTTTCCCTGTGTCTaGATGCACCTGAGAGACAGGAAGCCACTCTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: VVKCPQRCFPCV*MHLRDRKPLLL Trigger: AAGTAAGAGTGGCTTCCTGTCTCTCAGGTGCATGCAGACACAGGGAAAGCATCTTTGAGGGCATTTAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | TTGTCTTACCTTCTACCCACGAGGTGCTACACCCACTaGCATCAGCACCAGTTTATGTTGGGTTTTGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: LSYLLPTRCYTH*HQHQFMLGFAL Trigger: TAATGCAAAACCCAACATAAACTGGTGCTGATGCCAGTGGGTGTAGCACCTCGTGGGTAGAAGGTAAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR GCA 72 bp | AAATGCCAAAAGAAGTGTCCCATTACTGGCAAAGAATaGCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KCQKKCPITGKE*QHRQAQIKRAV Trigger: AACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGGGACACTTCTTTTGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CCA 72 bp | GGCACCTTCACACAGGGTGACGGCTCTAAGGATGACTaGAAAAATGAAGGTGATTTAAGCCAGGTTAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GTFTQGDGSKDD*KNEGDLSQVKK Trigger: TTTCTTAACCTGGCTTAAATCACCTTCATTTTTCCAGTCATCCTTAGAGCCGTCACCCTGTGTGAAGGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | AACCTCTGTTGTTGTGTGTGTTTGGGGGCGCCTATGTaGAAGTCAATAGAAATGGCAAAATTGTTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NLCCCVCLGAPM*KSIEMAKLLLP Trigger: TGGCAGCAACAATTTTGCCATTTCTATTGACTTTCACATAGGCGCCCCCAAACACACACAACAACAGAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | AGTAACACAGAAAATCTCTGCTGCATGTTTCCAAATTaGACCAGCAGGCCCCACCCAACACAGATAAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SNTENLCCMFPN*TSRPHPTQIKL Trigger: TAGCTTTATCTGTGTTGGGTGGGGCCTGCTGGTTCAATTTGGAAACATGCAGCAGAGATTTTCTGTGTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR-3UTR CAA 90 bp | TACCTAGGTAGGAGAAGCCAGAGAACAGTCTTCAACTTTCTTTCCATCCTTGCCTGTTGGCTATTTGTTTaGTTCTTTGTGTGGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YLGRRSQRTVFNFLSILACWLFV*FFVWLG Trigger: ACCCAACCACACAAAGAACAAAACAAATAGCCAACA...GGCAAGGATGGAAAGAAAGTTGAAGACTGTTCTCTGGCTTCTCCTACCTAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | GAACAGCATCTACATCCAAATGTTCACAGTGGTCTCTaGATGACGGGCCTTCCTTTATTCTTTTGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EQHLHPNVHSGL*MTGLPLFFCFQ Trigger: CTGAAAGCAAAAGAATAAAGGAAGGCCCGTCATTCAGAGACCACTGTGAACATTTGGATGTAGATGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | AACCACTTGACTCCACAATTATCAAAAACATGCTTTTaGAGAACTACTCACGGCCACGGCATGGAGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: NHLTPQLSKTCF*RTTHGHGMEKC Trigger: GCATTTCTCCATGCCGTGGCCGTGAGTAGTTCTTCAAAAGCATGTTTTTGATAATTGTGGAGTCAAGTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR CCA 72 bp | TTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTaGTCTCTGAATGACGGGCCTTCCTTTATTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LGRTASTSKCSQ*SLNDGPSFILL Trigger: CAAAAGAATAAAGGAAGGCCCGTCATTCAGAGACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCATGGTGACCACCCACTACTAATAGCTCAGCTGAACTCTGATTTTAGAGGTTGTTGGCTATTTGTTTaGTTCTTTGTGTGGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SHGDHPLLIAQLNSDFRGCWLFV*FFVWLG Trigger: ACCCAACCACACAAAGAACAAAACAAATAGCCAACA...ACCTCTAAAATCAGAGTTCAGCTGAGCTATTAGTAGTGGGTGGTCACCATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGAACAAAGAGTTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTGGTCCTGTTTGTTGGCTATTaGTTTTGTTCTTTGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LEQRVRENSIYIQMFTVVLFVGY*FCSLCG Trigger: ACCACACAAAGAACAAAACAAATAGCCAACAAACAG...GACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAACTCTTTGTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGAACAAAGAGTTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTGGTCACCCTGAATTCCTGTTaGTTGGCTATTTGTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LEQRVRENSIYIQMFTVVTLNSC*LAICFV Trigger: AACAAAACAAATAGCCAACAAACAGGAATTCAGGGT...GACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAACTCTTTGTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR TCA 72 bp | TTTTCCAAGAAGAGCTTTGCTATTCTGCTTTGCTACTaGTTCCCAAATGGCCCAAATGCATTTCTGAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSKKSFAILLCY*FPNGPNAFLSL Trigger: TAGACTCAGAAATGCATTTGGGCCATTTGGGAATCAGTAGCAAAGCAGAATAGCAAAGCTCTTCTTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
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| 3UTR GCA 72 bp | TTTCAGGTATTCATATTGGTTAATTCATTTGCTTACTaGTGCAAAAGTGCTTTTGACAGAAACAGCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQVFILVNSFAY*CKSAFDRNSFP Trigger: AGGGAAGCTGTTTCTGTCAAAAGCACTTTTGCAGCAGTAAGCAAATGAATTAACCAATATGAATACCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGGGCTGTGGTGGCAGCTaGGCAGGGTGCTGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGGLEASWVAAEPRWGRGCGGS*AGCCCK Trigger: CTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCC...CCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCGGCTGTGGTGGCAGCTaGGCAGGGTGCTGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLAGGLEASWVAAEPRWGGCGGS*AGCCCK Trigger: CTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCC...GCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MAGRWSGSVLGGGRAALGGSWAG*CCKGLV Trigger: CACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCC...CCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCAT 71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGCTGGGCAGGGTGCTaGTGCAAGGGGTTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLAGGLEASWVAAEPRWGSWAGC*CKGLVL Trigger: AAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCT...GCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | GGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLEASWVAAEPRWGRYPGSWAG*CCKGLV Trigger: CACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCC...AGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VAAEPRWGRYPGSNRQPGLLPDL*GRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAA...GCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLEASWVAAEPRWGRYPGLLPDL*GRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAA...GCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCCTTCAGGGCGTTTCTTaGGAGGCTGTGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLAGGLEASWVAAEPRWGLQGVS*EAVVAA Trigger: AGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAG...GCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | TGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCACTGCTCTATGTTGCTaGCCGACCTCTGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRPSRAGAGILAAIGSPATALCC*PTSGAG Trigger: GCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGT...GGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGTTTCTTGCGAGGCTGTaGTGGCAGCTGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEPRWGRYPGSNRQPGRRFLARL*WQLGRV Trigger: CACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAA...CCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | AGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGAGILAAIGSPAAGHWAGCC*KGLVLG Trigger: ACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCA...GTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGGLEASWVAAEPRWGRYWAGCC*KGLVLG Trigger: ACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCA...ATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | GTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVWKRPGWRPSRAGAGILWAGCC*KGLVLG Trigger: ACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCA...CAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | CAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVVWKRPGWRPSRAGAGIWAGCC*KGLVLG Trigger: ACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCA...GATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | TGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACGTCACTGCGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WGRYPGSNRQPGRRPRHCGSWAG*CCKGLV Trigger: CACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCC...GCAGTGACGTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| CDS-3UTR GCA 90 bp | GGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTACTTCAGGGCGTTTCTTaGGAGGCTGTGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRWSGSVLGGGRAALGQVLQGVS*EAVVAA Trigger: AGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAG...TACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | GCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGACTGCTCTATGTTGCTaGCCGACCTCTGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASWVAAEPRWGRYPGSNRTALCC*PTSGAG Trigger: GCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGT...CCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | GCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCGGATTGCTCTGGTACTaGTGCCTCCAAACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAEPRWGRYPGSNRQPGRGLLWY*CLQTSW Trigger: CCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCC...GCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | GCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCGGAAGAGGAGGAGGATaGCACCTGCATGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAEPRWGRYPGSNRQPGRGRGGG*HLHEAK Trigger: TTTGGCTTCATGCAGGTGTCATCCTCCTCCTCTTCC...GCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | GGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCATTTCTGCACCACTTGTaGGCATTCCCGCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GWQVVWKRPGWRPSRAGAFLHHL*AFPLGS Trigger: GGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAA...TGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGTGTACTGCTCTATGTTaGTGCCCGACCTCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPCTALC*CPTSGA Trigger: TGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACA...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR CCA 90 bp | GGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGCATCTGGATTGCTCTaGTACTGCTGCCTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GWQVVWKRPGWRPSRAGAASGLL*YCCLQT Trigger: GGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGC...TGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCCTGCACAGCAGCATCTaGATTGCTCTGGTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLAGGLEASWVAAEPRWGLHSSI*IALVLL Trigger: CAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAG...GCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGAGAATGGATGAGCTTTaGGAGGCCCGTACCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPRMDEL*EARTLP Trigger: TGGAAGGGTACGGGCCTCTCAAAGCTCATCCATTCT...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | TGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCGTCTCAAAGAATGGATaGGCTTTGAGAGGCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WLAGGLEASWVAAEPRWGVSKNG*ALRGPY Trigger: GTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGAC...GCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGAGGATGACACCTGCATaGAGCCAAACTGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPRMTPA*SQTGSG Trigger: TCCTGAGCCAGTTTGGCTTCATGCAGGTGTCATCCT...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | CGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAAGGATGACACCTGCATaGAGCCAAACTGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSRAGAGILAAIGSPAARMTPA*SQTGSG Trigger: TCCTGAGCCAGTTTGGCTTCATGCAGGTGTCATCCT...TGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
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| CDS-3UTR TCA 90 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGGATGACACCTGCATaGAGCCAAACTGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLEASWVAAEPRWGRYPGRMTPA*SQTGSG Trigger: TCCTGAGCCAGTTTGGCTTCATGCAGGTGTCATCCT...GCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGTTTCTGCACCACTTGTaGGCATTCCCGCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: MAGRWSGSVLGGGRAALGFLHHL*AFPLGS Trigger: GGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAA...CCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATCTTCAGGGCGTTTCTTaGGAGGCTGTGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EASWVAAEPRWGRYPGSNLQGVS*EAVVAA Trigger: AGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAG...ATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATGGATTGCTCTGGTACTaGTGCCTCCAAACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLEASWVAAEPRWGRYGLLWY*CLQTSW Trigger: CCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCC...ATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCATCTGGATTGCTCTaGTACTGCTGCCTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPASGLL*YCCLQT Trigger: GGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGC...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAGGCCAGAACAACTGTTaGAAAAGAGCCCTCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKRPGWRPSRAGAGILAAGQNNC*KRALAK Trigger: CTTGGCGAGGGCTCTTTTTCAACAGTTGTTCTGGCC...TGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGGCCAGAACAACTGTTaGAAAAGAGCCCTCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVWKRPGWRPSRAGAGILGQNNC*KRALAK Trigger: CTTGGCGAGGGCTCTTTTTCAACAGTTGTTCTGGCC...CAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCAGGATGACACCTGCATaGAGCCAAACTGGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVVWKRPGWRPSRAGAGIRMTPA*SQTGSG Trigger: TCCTGAGCCAGTTTGGCTTCATGCAGGTGTCATCCT...GATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGGGAAGAGGAGGAGGATaGCACCTGCATGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSGSVLGGGRAALGQVSWGRGGG*HLHEAK Trigger: TTTGGCTTCATGCAGGTGTCATCCTCCTCCTCTTCC...CCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGGGAAGAGGAGGAGGATaGCACCTGCATGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGSVLGGGRAALGQVSWQGRGGG*HLHEAK Trigger: TTTGGCTTCATGCAGGTGTCATCCTCCTCCTCTTCC...CTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | AGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACTTTCTGCACCACTTGTaGGCATTCCCGCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGAGILAAIGSPAAGHFLHHL*AFPLGS Trigger: GGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAA...GTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGTGGCCCTGGCTTGTTTaGTCTCTGGGGATAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPWPWLV*SLGITL Trigger: AAGTGTTATCCCCAGAGAGCAAACAAGCCAGGGCCA...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCGGAGGTGTCTGCTGGTaGAAATTCTCCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLEASWVAAEPRWGRYPGGGVCW*KFSQVM Trigger: CATCACTTGGGAGAATTTGCACCAGCAGACACCTCC...GCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | AGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGAGGAGGATGACACCTaGATGAAGCCAAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWLAGGLEASWVAAEPRWEEDDT*MKPNWL Trigger: GAGCCAGTTTGGCTTCATGCAGGTGTCATCCTCCTC...CCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCCCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEASWVAAEPRWGRYPGPPGSF*TTCEHS Trigger: GGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGG...GCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGRRPRHCTAASGLLWYCLLPDL*GRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAA...GCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCTGCACAGCAGCATCTaGATTGCTCTGGTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSGSVLGGGRAALGQVSWLHSSI*IALVLL Trigger: CAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAG...CCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | CGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACGTCACGGCCAGAACAACTGTTaGAAAAGAGCCCTCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWGRYPGSNRQPGRRPRHGQNNC*KRALAK Trigger: CTTGGCGAGGGCTCTTTTTCAACAGTTGTTCTGGCC...GTGACGTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCGTCTCAAAGAATGGATaGGCTTTGAGAGGCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RWSGSVLGGGRAALGQVSVSKNG*ALRGPY Trigger: GTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGAC...GGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGGTCTCAAAGAATGGATaGGCTTTGAGAGGCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WSGSVLGGGRAALGQVSWVSKNG*ALRGPY Trigger: GTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGAC...CCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCTGGCCCTGGCTTGTTTaGTCTCTGGGGATAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PGWRPSRAGAGILAAIGSWPWLV*SLGITL Trigger: AAGTGTTATCCCCAGAGAGCAAACAAGCCAGGGCCA...GCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTTGGCCCTGGCTTGTTTaGTCTCTGGGGATAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLEASWVAAEPRWGRYPWPWLV*SLGITL Trigger: AAGTGTTATCCCCAGAGAGCAAACAAGCCAGGGCCA...AGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGGGAGGTGTCTGCTGGTaGAAATTCTCCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WSGSVLGGGRAALGQVSWGGVCW*KFSQVM Trigger: CATCACTTGGGAGAATTTGCACCAGCAGACACCTCC...CCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPRWGRYPGSNRQPGRRPPPGSF*TTCEHS Trigger: GGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGG...TGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGATGGTCTCAAAGAATaGATGAGCTTTGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWRPSRAGAGILAAIGSPDGLKE*MSFERP Trigger: GGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATC...CGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATAATGTGGCCCTTCTGTaGGTAATAACTGTCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGLEASWVAAEPRWGRYNVALL*VITVVV Trigger: GACGACGACAGTTATTACTCACAGAAGGGCCACATT...ATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | AGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACTGGTCGGAGTTCTTGTaGCCATGGGATTTCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGAGILAAIGSPAAGHWSEFL*PWDFTF Trigger: AAAGGTGAAATCCCATGGTCACAAGAACTCCGACCA...GTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCAAATCATGGATGTACTaGTCTATGTTGCTGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAAEPRWGRYPGSNRQPGKSWMY*SMLLPD Trigger: GTCGGGCAGCAACATAGAGCAGTACATCCATGATTT...GCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCGATGGTCTCAAAGAATaGATGAGCTTTGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGWRPSRAGAGILAAIGDGLKE*MSFERP Trigger: GGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATC...GCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGAATGTGGCCCTTCTGTaGGTAATAACTGTCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWVAAEPRWGRYPGSNRQNVALL*VITVVV Trigger: GACGACGACAGTTATTACTCACAGAAGGGCCACATT...CTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCCCAAGCTGGATTCTCTACAGTACCTCCAGCCTTGCCCAGGTTCAGGACGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPSWILYSTSSLAQVQDGSWAG*CCKGLV Trigger: CACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCC...GTCCTGAACCTGGGCAAGGCTGGAGGTACTGTAGAGAATCCAGCTTGGGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR GCA 90 bp | CCCGGCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTGTACTGCTCTATGTTaGTGCCCGACCTCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRRPRHCTAASGLLWYCCTALC*CPTSGA Trigger: TGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACA...GCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGAAATCATGGATGTACTaGTCTATGTTGCTGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSGSVLGGGRAALGQVSWKSWMY*SMLLPD Trigger: GTCGGGCAGCAACATAGAGCAGTACATCCATGATTT...CCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | AGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCCACGGGTTTCCACCGGCTTaGTTTTCCAATAACAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGAGILAAIGSPAAGHGFPPA*FSNNNL Trigger: AAGGTTGTTATTGGAAAAGCAAGCCGGTGGAAACCC...GTGGCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATGATGGTCTCAAAGAATaGATGAGCTTTGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EASWVAAEPRWGRYPGSNDGLKE*MSFERP Trigger: GGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATC...ATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCCCGGCCGCAGGCTTATTTTCTACAAACTaGTGCCAAGGGTTTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PSRAGAGILAAIGSPAAGLFSTN*CQGFPP Trigger: CGGTGGAAACCCTTGGCACCAGTTTGTAGAAAATAA...GCCTGCGGCCGGGCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAAATCATGGATGTACTaGTCTATGTTGCTGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: EASWVAAEPRWGRYPGSNKSWMY*SMLLPD Trigger: GTCGGGCAGCAACATAGAGCAGTACATCCATGATTT...ATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | TCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGAAATCATGGATGTACTaGTCTATGTTGCTGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: STRWLAGGLEASWVAAEPKSWMY*SMLLPD Trigger: GTCGGGCAGCAACATAGAGCAGTACATCCATGATTT...CGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGGGGTTTCCACCGGCTTaGTTTTCCAATAACAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWVAAEPRWGRYPGSNRQGFPPA*FSNNNL Trigger: AAGGTTGTTATTGGAAAAGCAAGCCGGTGGAAACCC...CTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATGGGTTTCCACCGGCTTaGTTTTCCAATAACAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EASWVAAEPRWGRYPGSNGFPPA*FSNNNL Trigger: AAGGTTGTTATTGGAAAAGCAAGCCGGTGGAAACCC...ATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCATTAGTGTCCAAATCATaGATGTACTGCTCTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWQVVWKRPGWRPSRAGALVSKS*MYCSML Trigger: CAACATAGAGCAGTACATCCATGATTTGGACACTAA...TGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTTATTTTCTACAAACTaGTGCCAAGGGTTTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RWSGSVLGGGRAALGQVSLFSTN*CQGFPP Trigger: CGGTGGAAACCCTTGGCACCAGTTTGTAGAAAATAA...GGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGTTATTTTCTACAAACTaGTGCCAAGGGTTTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASWVAAEPRWGRYPGSNRLFSTN*CQGFPP Trigger: CGGTGGAAACCCTTGGCACCAGTTTGTAGAAAATAA...CCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTACCGTGCAAGGAGCTGGGTCTCCATGGCCACAGCAGTGCATGGAAGCCAGGCCAGAACAACTGTTaGAAAAGAGCCCTCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPCKELGLHGHSSAWKPGQNNC*KRALAK Trigger: CTTGGCGAGGGCTCTTTTTCAACAGTTGTTCTGGCC...TGGCTTCCATGCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTGCCGAGGAGGATGACACCTaGATGAAGCCAAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGHVTAQQHLDCSGTAAEEDDT*MKPNWL Trigger: GAGCCAGTTTGGCTTCATGCAGGTGTCATCCTCCTC...GGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| CDS-3UTR GCA 90 bp | GCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTGCCGGAGGTGTCTGCTGGTaGAAATTCTCCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAGHVTAQQHLDCSGTAAGGVCW*KFSQVM Trigger: CATCACTTGGGAGAATTTGCACCAGCAGACACCTCC...GGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
||
| CDS-3UTR CCA 90 bp | GCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGTTAGTGTCCAAATCATaGATGTACTGCTCTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASWVAAEPRWGRYPGSNRLVSKS*MYCSML Trigger: CAACATAGAGCAGTACATCCATGATTTGGACACTAA...CCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCGTCCTGTTAGGCGTGTaGACAAAGAAAGTTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPGWRPSRAGAGILAAIGVLLGV*TKKVLK Trigger: TTTTAAAACTTTCTTTGTCCACACGCCTAACAGGAC...GCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTACCGTGCAAGGAGCTGGGTCTCCATGGCCACAGCAGTGCATGGAAGCCAAATGTGGCCCTTCTGTaGGTAATAACTGTCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPCKELGLHGHSSAWKPNVALL*VITVVV Trigger: GACGACGACAGTTATTACTCACAGAAGGGCCACATT...TGGCTTCCATGCACTGCTGTGGCCATGGAGACCCAGCTCCTTGCACGGTAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTGGATGCTAAGAGGGGCGGGTGCATCTGGATTGCTCTaGTACTGCTGCCTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: WGKVEAGMQFLWMLRGAGASGLL*YCCLQT Trigger: GGTTTGGAGGCAGCAGTACCAGAGCAATCCAGATGC...ACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCATTGGGACATAGGAGTCTGAGGTGCTACTGTGAGCAGATGGGAGATGCCGGATTGCTCTGGTACTaGTGCCTCCAAACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLGHRSLRCYCEQMGDAGLLWY*CLQTSW Trigger: CCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCC...GGCATCTCCCATCTGCTCACAGTAGCACCTCAGACTCCTATGTCCCAATGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CCATTACTGGCAAAGAATGCCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTTCTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLLAKNASIGRLRLRGLFLLPDL*GRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAA...GAACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTGGATGCTAAGAGGGGCGGGTTGGTCGGAGTTCTTGTaGCCATGGGATTTCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WGKVEAGMQFLWMLRGAGWSEFL*PWDFTF Trigger: AAAGGTGAAATCCCATGGTCACAAGAACTCCGACCA...ACCCGCCCCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCCCAAGCTGGATTCTCTACAGTACCTCCAGCCTTGCCCAGGTTCAGGACCCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGPSWILYSTSSLAQVQDPPGSF*TTCEHS Trigger: GGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGG...GTCCTGAACCTGGGCAAGGCTGGAGGTACTGTAGAGAATCCAGCTTGGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | TATCAGGTGGGGAAAGGTAGAGGCAGGCATGCAGTTCCTGTGGATGCTAAGAGGGAGGAGGATGACACCTaGATGAAGCCAAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YQVGKGRGRHAVPVDAKREEDDT*MKPNWL Trigger: GAGCCAGTTTGGCTTCATGCAGGTGTCATCCTCCTC...CCTCTTAGCATCCACAGGAACTGCATGCCTGCCTCTACCTTTCCCCACCTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | GCCAACTTTCAGGGATATCCTAGTCAAAGAGAGGTACAGCCAAGTCCCTCAAAAACTGCTCTATGTTGCTaGCCGACCTCTGGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANFQGYPSQREVQPSPSKTALCC*PTSGAG Trigger: GCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGT...TTTTGAGGGACTTGGCTGTACCTCTCTTTGACTAGGATATCCCTGAAAGTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CCCACTGCCCAGCTGGAGCACAGAAAAACAGGTGGAATTGACCCATTCAAGCTACTGCACAGCAGCATCTaGATTGCTCTGGTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQLEHRKTGGIDPFKLLHSSI*IALVLL Trigger: CAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAG...TAGCTTGAATGGGTCAATTCCACCTGTTTTTCTGTGCTCCAGCTGGGCAGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | CCATTACTGGCAAAGAATGCCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTTCGGAAGAGGAGGAGGATaGCACCTGCATGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLAKNASIGRLRLRGLFGRGGG*HLHEAK Trigger: TTTGGCTTCATGCAGGTGTCATCCTCCTCCTCTTCC...GAACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | ACATCAGTGGTAGAGCACTCGCTTAGCAATCCTGAACCTCACTATTCAATTCCCCTTCAGGGCGTTTCTTaGGAGGCTGTGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVVEHSLSNPEPHYSIPLQGVS*EAVVAA Trigger: AGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAG...GGGAATTGAATAGTGAGGTTCAGGATTGCTAAGCGAGTGCTCTACCACTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACGGCTGTGGTGGCAGCTaGGCAGGGTGCTGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHGCGGS*AGCCCK Trigger: CTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | CCATTACTGGCAAAGAATGCCAGCATAGGCAGGCTCAGATTAAGAGGGCTGTTCGGAGGTGTCTGCTGGTaGAAATTCTCCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLLAKNASIGRLRLRGLFGGVCW*KFSQVM Trigger: CATCACTTGGGAGAATTTGCACCAGCAGACACCTCC...GAACAGCCCTCTTAATCTGAGCCTGCCTATGCTGGCATTCTTTGCCAGTAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | AGGTACAGCCAAGTCCCTCAAAAGCACTCTGCAAGAAATGCCAAAAGAAGTGTCTGTACTGCTCTATGTTaGTGCCCGACCTCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RYSQVPQKHSARNAKRSVCTALC*CPTSGA Trigger: TGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACA...GACACTTCTTTTGGCATTTCTTGCAGAGTGCTTTTGAGGGACTTGGCTGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CAA 72 bp | GGAAGCAACAAAGGACTCTCCCATATACAGCCAGCTTaGTGGTCTAATTCAAGCCAAGCCTCAGTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSNKGLSHIQPA*WSNSSQASVHC Trigger: GCAGTGGACTGAGGCTTGGCTTGAATTAGACCACAAAGCTGGCTGTATATGGGAGAGTCCTTTGTTGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACTTTCTTGCGAGGCTGTaGTGGCAGCTGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHFLARL*WQLGRV Trigger: CACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR TCA 90 bp | AGTCATGGTGACCACCCACTACTAATAGCTCAGCTGAACTCTGATTTTAGAGGTGTCTCAAAGAATGGATaGGCTTTGAGAGGCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHGDHPLLIAQLNSDFRGVSKNG*ALRGPY Trigger: GTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGAC...ACCTCTAAAATCAGAGTTCAGCTGAGCTATTAGTAGTGGGTGGTCACCATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CAA 72 bp | CACACACACACACACACACACACACACACACACGAGTaGTACAAACTGACATCCACATCCTGTCCTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHE*YKLTSTSCPTK Trigger: CTTTGTAGGACAGGATGTGGATGTCAGTTTGTACAACTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGACACATGATTTCTAGAGGTACTAACAGGGTATTTCTCTCTCTCCTTACAGAGGAGGATGACACCTaGATGAAGCCAAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHMISRGTNRVFLSLLTEEDDT*MKPNWL Trigger: GAGCCAGTTTGGCTTCATGCAGGTGTCATCCTCCTC...TGTAAGGAGAGAGAGAAATACCCTGTTAGTACCTCTAGAAATCATGTGTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CTTACATACATCCCAAATTTACTGTTTCACACACACACACACACACACACACACGATGGTCTCAAAGAATaGATGAGCTTTGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTYIPNLLFHTHTHTHTHDGLKE*MSFERP Trigger: GGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATC...GTGTGTGTGTGTGTGTGTGTGTGTGTGAAACAGTAAATTTGGGATGTATGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CAA 72 bp | CAACCACTTGACTCCACAATTATCAAAAACATGCTTTaGAAGAACTACTCACGGCCACGGCATGGAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPLDSTIIKNML*KNYSRPRHGEM Trigger: CATTTCTCCATGCCGTGGCCGTGAGTAGTTCTTCAAAAGCATGTTTTTGATAATTGTGGAGTCAAGTGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR CAA 72 bp | TGGTTAATTCATTTGCTTACTGCTGCAAAAGTGCTTTaGACAGAAACAGCTTCCCTCACATTGCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WLIHLLTAAKVL*TETASLTLQAI Trigger: AATGGCCTGCAATGTGAGGGAAGCTGTTTCTGTCAAAAGCACTTTTGCAGCAGTAAGCAAATGAATTAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTATTTCTCTCTCTCCTTACATACATCCCAAATTTACTGTTTCACACACGGGTTTCCACCGGCTTaGTTTTCCAATAACAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGYFSLSLHTSQIYCFTHGFPPA*FSNNNL Trigger: AAGGTTGTTATTGGAAAAGCAAGCCGGTGGAAACCC...GTGTGTGAAACAGTAAATTTGGGATGTATGTAAGGAGAGAGAGAAATACCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATGGTGACCACCCACTACTAATAGCTCAGCTGAACTCTGATTTTAGAGGTTTAGTGTCCAAATCATaGATGTACTGCTCTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHGDHPLLIAQLNSDFRGLVSKS*MYCSML Trigger: CAACATAGAGCAGTACATCCATGATTTGGACACTAA...ACCTCTAAAATCAGAGTTCAGCTGAGCTATTAGTAGTGGGTGGTCACCATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAAGAAGAGCTTTGCTATTCTGCTTTGCTACTGATTCCCAAATGGCCCGTCCTGTTAGGCGTGTaGACAAAGAAAGTTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFQEELCYSALLLIPKWPVLLGV*TKKVLK Trigger: TTTTAAAACTTTCTTTGTCCACACGCCTAACAGGAC...GGGCCATTTGGGAATCAGTAGCAAAGCAGAATAGCAAAGCTCTTCTTGGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAACAAAGAGTTAGGGAGAACAGCATCTACATCCAAATGTTCACAGTGGTCGTCCTGTTAGGCGTGTaGACAAAGAAAGTTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEQRVRENSIYIQMFTVVVLLGV*TKKVLK Trigger: TTTTAAAACTTTCTTTGTCCACACGCCTAACAGGAC...GACCACTGTGAACATTTGGATGTAGATGCTGTTCTCCCTAACTCTTTGTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| 3UTR CAA 72 bp | TGGTTTCTTTTCCAAGAAGAGCTTTGCTATTCTGCTTaGCTACTGATTCCCAAATGGCCCAAATGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFLFQEELCYSA*LLIPKWPKCIS Trigger: AGAAATGCATTTGGGCCATTTGGGAATCAGTAGCAAAGCAGAATAGCAAAGCTCTTCTTGGAAAAGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| 3UTR CAA 72 bp | CAGTGGTCTCTGAATGACGGGCCTTCCTTTATTCTTTaGCTTTCAGAAAACATACACTTCTTTAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWSLNDGPSFIL*LSENIHFFKKA Trigger: TGCTTTCTTAAAGAAGTGTATGTTTTCTGAAAGCAAAAGAATAAAGGAAGGCCCGTCATTCAGAGACCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
||
| CDS-3UTR CCA 90 bp | GAGCATACGAGGGAAATCCATCATCCGGTAATTACATCTAAAGCACAGATATTTTTAGTGTCCAAATCATaGATGTACTGCTCTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EHTREIHHPVITSKAQIFLVSKS*MYCSML Trigger: CAACATAGAGCAGTACATCCATGATTTGGACACTAA...AAATATCTGTGCTTTAGATGTAATTACCGGATGATGGATTTCCCTCGTATGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102927.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCTGCTGCTGCAAGGGGTaGGTGCTTGGTCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QVVWKRPGWRPSRAGAGICCCKG*VLGRAS Trigger: TGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCA...GATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGCTGCTGCAAGGGGTaGGTGCTTGGTCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWSGSVLGGGRAALGQVSCCCKG*VLGRAS Trigger: TGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCA...GGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGLEASWVAAEPRWGRYMYCSM*LPDLWG Trigger: GCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACAT...ATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS GCA 90 bp | GGGCGTTTCTTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGTCGGGCTTCAGCTGTGGTGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRFLRGCGGSWAGCC*KGLVLGRASAVVPS Trigger: GGATGGCACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
||
| CDS-3UTR CAA 90 bp | AAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATATGCTGCTGCAAGGGGTaGGTGCTTGGTCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRPGWRPSRAGAGILAAICCCKG*VLGRAS Trigger: TGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCA...TATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCTTGGCCCTGGCTTGTTaGCTCTCTGGGGATAACACT | + |
|
Preference number: 5 (lower is better) Translates to: LEASWVAAEPRWGRYPGSLALAC*LSGDNT Trigger: AGTGTTATCCCCAGAGAGCAAACAAGCCAGGGCCAA...GCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS-3UTR CAA 90 bp | TCCACGAGATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: STRWLAGGLEASWVAAEPMYCSM*LPDLWG Trigger: GCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACAT...CGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATCTCGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 |
||
| CDS GCA 90 bp | GAGGCTGTGGTGGCAGCTGGGCAGGGTGCTGCTGCAAGGGGTTGGTaGTTGGTCGGGCTTCAGCTGTGGTGCCATCCATGGTGGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EAVVAAGQGAAARGW*LVGLQLWCHPWWIP Trigger: AGGGATCCACCATGGATGGCACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
||
| CDS GCA 90 bp | TCAGGGCGTTTCTTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTGCTaGTGCAAGGGGTTGGTGCTTGGTCGGGCTTCAGCTGTGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRFLRGCGGSWAGC*CKGLVLGRASAVVP Trigger: TGGCACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACGCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
||
| CDS CCA 90 bp | TGCGAGGCTGTGGTGGCAGCTGGGCAGGGTGCTGCTGCAAGGGGTTaGTGCTTGGTCGGGCTTCAGCTGTGGTGCCATCCATGGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CEAVVAAGQGAAARG*CLVGLQLWCHPWWI Trigger: GATCCACCATGGATGGCACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTTGGCCCTGGCTTGTTaGCTCTCTGGGGATAACACT | + |
|
Preference number: 5 (lower is better) Translates to: RWSGSVLGGGRAALGQVSLALAC*LSGDNT Trigger: AGTGTTATCCCCAGAGAGCAAACAAGCCAGGGCCAA...GGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCTGGCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGTTCCTACAAATGAGTaGGCCCTGGCTTGTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGWQVVWKRPGWRPSRAGVPTNE*ALACLL Trigger: GAGCAAACAAGCCAGGGCCAACTCATTTGTAGGAAC...CCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGCCAGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
||
| CDS GCA 90 bp | TCTTCAGGGCGTTTCTTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTGCTTGGTCGGGCTTCAGCTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGRFLRGCGGSWAG*CCKGLVLGRASAVV Trigger: CACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000144533.8 ENSMUST00000154982.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGCGTTCCTACAAATGAGTaGGCCCTGGCTTGTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGWRPSRAGAGILAAIGSVPTNE*ALACLL Trigger: GAGCAAACAAGCCAGGGCCAACTCATTTGTAGGAAC...GCTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
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| CDS-3UTR CAA 90 bp | TCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCAGCAATAGGCAGGTTCCTACAAATGAGTaGGCCCTGGCTTGTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SWVAAEPRWGRYPGSNRQVPTNE*ALACLL Trigger: GAGCAAACAAGCCAGGGCCAACTCATTTGTAGGAAC...CTGCCTATTGCTGCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 |
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| CDS-3UTR CAA 90 bp | GCCGCAGGCCACGTCACTGCACAGCAGCATCTGGATTGCTCTGGTACTGCTGCCATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGHVTAQQHLDCSGTAAMYCSM*LPDLWG Trigger: GCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACAT...GGCAGCAGTACCAGAGCAATCCAGATGCTGCTGTGCAGTGACGTGGCCTGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115407.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGGCATAACTGTCGTCGTCTaGCAAATAAACCCTTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: GLEASWVAAEPRWGRYPGITVVV*QINPFA Trigger: AGCGAAAGGGTTTATTTGCAAGACGACGACAGTTAT...GCCAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS CCA 90 bp | AACTTGAAGTCTTCAGGGCGTTTCTTGCGAGGCTGTGGTGGCAGCTaGGCAGGGTGCTGCTGCAAGGGGTTGGTGCTTGGTCGGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NLKSSGRFLRGCGGS*AGCCCKGLVLGRAS Trigger: TGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAGACTTCAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000144533.8 ENSMUST00000154982.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATATAACTGTCGTCGTCTaGCAAATAAACCCTTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: AGGLEASWVAAEPRWGRYITVVV*QINPFA Trigger: AGCGAAAGGGTTTATTTGCAAGACGACGACAGTTAT...ATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCTGGAAGCGTCCTGGGTGGCGGCCGAGCCGCGCTGGGGCAGGTATCCTGATAACTGTCGTCGTCTaGCAAATAAACCCTTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: VVWKRPGWRPSRAGAGILITVVV*QINPFA Trigger: AGCGAAAGGGTTTATTTGCAAGACGACGACAGTTAT...CAGGATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS CCA 90 bp | GTGTCCAAATCATGGATGTACTGCTCTATGTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACCGTAGACAGGGAGTGGGAAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VSKSWMYCSMLLPDL*GRLVSTVDREWEEE Trigger: CTCCTCTTCCCACTCCCTGTCTACGGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS GCA 90 bp | CTGGATTGCTCTGGTACTGCTGCCTCCAAACCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCCCGCTTGGATCCATCAGGTAGTACG | + |
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Preference number: 5 (lower is better) Translates to: LDCSGTAASKPPGSF*TTCEHSRLDPSGST Trigger: CGTACTACCTGATGGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGGTTTGGAGGCAGCAGTACCAGAGCAATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS CCA 90 bp | CCAAACCTCCTGGATCTTTCTGCACCACTTGTGAGCATTCCCGCTTaGATCCATCAGGTAGTACGTCCTGTTAGGCGTGTGGACAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PNLLDLSAPLVSIPA*IHQVVRPVRRVDKE Trigger: TTCTTTGTCCACACGCCTAACAGGACGTACTACCTGATGGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS-3UTR CAA 90 bp | TACCTAGGTAGGAGAAGCCAGAGAACAGTCTTCAACTTTCTTTCCATCCTTGCCATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: YLGRRSQRTVFNFLSILAMYCSM*LPDLWG Trigger: GCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACAT...GGCAAGGATGGAAAGAAAGTTGAAGACTGTTCTCTGGCTTCTCCTACCTAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS GCA 90 bp | TGTAAGTCTAGTTCAAAAGAGTTAGTGTCCAAATCATGGATGTACTaGTCTATGTTGCTGCCCGACCTCTGGGGCAGGCTGGTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: CKSSSKELVSKSWMY*SMLLPDLWGRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACACTAACTCTTTTGAACTAGACTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS TCA 90 bp | GACAAAGAAAGTTTTAAAATTCTTGGCTTCTGGTCGGAGTTCTTGTaGCCATGGGATTTCACCTTTCAAGACCTTGTTGACAGGATCAAC | + |
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Preference number: 5 (lower is better) Translates to: DKESFKILGFWSEFL*PWDFTFQDLVDRIN Trigger: GTTGATCCTGTCAACAAGGTCTTGAAAGGTGAAATCCCATGGTCACAAGAACTCCGACCAGAAGCCAAGAATTTTAAAACTTTCTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS GCA 72 bp | TTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTGCTGCTaGAAGGGGTTGGTGCTTGGTCGGGCTTCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LRGCGGSWAGCC*KGLVLGRASAV Trigger: CACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
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| CDS GCA 72 bp | CGTTTCTTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTaGTGCTGCAAGGGGTTGGTGCTTGGTCGGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RFLRGCGGSWAG*CCKGLVLGRAS Trigger: TGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
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| CDS CAA 90 bp | TTGCGAGGCTGTGGTGGCAGCTGGGCAGGGTGCTGCTGCAAGGGGTaGGTGCTTGGTCGGGCTTCAGCTGTGGTGCCATCCATGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LRGCGGSWAGCCCKG*VLGRASAVVPSMVD Trigger: ATCCACCATGGATGGCACCACAGCTGAAGCCCGACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000128997.2 ENSMUST00000144533.8 ENSMUST00000154982.2 |
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| CDS CCA 72 bp | TCTTCAGGGCGTTTCTTGCGAGGCTGTGGTGGCAGCTaGGCAGGGTGCTGCTGCAAGGGGTTGGTGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SSGRFLRGCGGS*AGCCCKGLVLG Trigger: ACCAAGCACCAACCCCTTGCAGCAGCACCCTGCCCAGCTGCCACCACAGCCTCGCAAGAAACGCCCTGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 ENSMUST00000144533.8 ENSMUST00000154982.2 |
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| CDS CCA 72 bp | TCATGGATGTACTGCTCTATGTTGCTGCCCGACCTCTaGGGCAGGCTGGTTTCCACCGTAGACAGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SWMYCSMLLPDL*GRLVSTVDREW Trigger: CCACTCCCTGTCTACGGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS CAA 72 bp | GAGTTAGTGTCCAAATCATGGATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGCAGGCTGGTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: ELVSKSWMYCSM*LPDLWGRLVST Trigger: GGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACACTAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS GCA 72 bp | TCTGGTACTGCTGCCTCCAAACCTCCTGGATCTTTCTaGACCACTTGTGAGCATTCCCGCTTGGATCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SGTAASKPPGSF*TTCEHSRLDPS Trigger: TGATGGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAAGATCCAGGAGGTTTGGAGGCAGCAGTACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS CCA 72 bp | CTGGATCTTTCTGCACCACTTGTGAGCATTCCCGCTTaGATCCATCAGGTAGTACGTCCTGTTAGGCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LDLSAPLVSIPA*IHQVVRPVRRV Trigger: CACACGCCTAACAGGACGTACTACCTGATGGATCCAAGCGGGAATGCTCACAAGTGGTGCAGAAAGATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 |
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| CDS CAA 90 bp | AGTTCAAAAGAGTTAGTGTCCAAATCATGGATGTACTGCTCTATGTaGCTGCCCGACCTCTGGGGCAGGCTGGTTTCCACCGTAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSKELVSKSWMYCSM*LPDLWGRLVSTVDR Trigger: CCTGTCTACGGTGGAAACCAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACACTAACTCTTTTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS GCA 72 bp | AGTTCAAAAGAGTTAGTGTCCAAATCATGGATGTACTaGTCTATGTTGCTGCCCGACCTCTGGGGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSKELVSKSWMY*SMLLPDLWGRL Trigger: CAGCCTGCCCCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACACTAACTCTTTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS CCA 72 bp | CTGGTGCAAATTCTCCCAAGTGATGGTCTCAAAGAATaGATGAGCTTTGAGAGGCCCGTACCCTTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LVQILPSDGLKE*MSFERPVPFHL Trigger: GAGATGGAAGGGTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATCACTTGGGAGAATTTGCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS TCA 72 bp | TGCAAATTCTCCCAAGTGATGGTCTCAAAGAATGGATaGGCTTTGAGAGGCCCGTACCCTTCCATCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CKFSQVMVSKNG*ALRGPYPSISS Trigger: TGAAGAGATGGAAGGGTACGGGCCTCTCAAAGCTCATCCATTCTTTGAGACCATCACTTGGGAGAATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS CCA 72 bp | TGTAAGTCTAGTTCAAAAGAGTTAGTGTCCAAATCATaGATGTACTGCTCTATGTTGCTGCCCGACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CKSSSKELVSKS*MYCSMLLPDLW Trigger: CCAGAGGTCGGGCAGCAACATAGAGCAGTACATCCATGATTTGGACACTAACTCTTTTGAACTAGACTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115407.9 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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| CDS TCA 72 bp | AGTTTTAAAATTCTTGGCTTCTGGTCGGAGTTCTTGTaGCCATGGGATTTCACCTTTCAAGACCTTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SFKILGFWSEFL*PWDFTFQDLVD Trigger: GTCAACAAGGTCTTGAAAGGTGAAATCCCATGGTCACAAGAACTCCGACCAGAAGCCAAGAATTTTAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052462.13 ENSMUST00000102927.10 ENSMUST00000115409.9 ENSMUST00000115411.8 |
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