Pregenerated sensors for PDP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048371Ensembl transcript IDs: ENSMUST00000059588.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCTCTGTGTAGTCCCAGCTGTCCTGGAACTCTCTAGACCAGGCTaGTCTCGAACTCAGAGATCTACCTGCCTCAGCTTCCCGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: FLCVVPAVLELSRPG*SRTQRSTCLSFPNA Trigger: AGCATTCGGGAAGCTGAGGCAGGTAGATCTCTGAGTTCGAGACCAGCCTGGTCTAGAGAGTTCCAGGACAGCTGGGACTACACAGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 90 bp | ACAGGGTGCTTCCACAGCAGCTGCAGCACTTCAAAGACTCGGCACTaGAATGGCTCCATTCCAGAATATTCTGGTTTAACCTGGGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: TGCFHSSCSTSKTRH*NGSIPEYSGLTWEV Trigger: AACCTCCCAGGTTAAACCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAGCTGCTGTGGAAGCACCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 90 bp | TGCAGCATGAACTGCACCACTAGCTTTGATCCTCAGTTAACAGGGTaGTTCCACAGCAGCTGCAGCACTTCAAAGACTCGGCACTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: CSMNCTTSFDPQLTG*FHSSCSTSKTRHCN Trigger: ATTGCAGTGCCGAGTCTTTGAAGTGCTGCAGCTGCTGTGGAAGCACCCTGTTAACTGAGGATCAAAGCTAGTGGTGCAGTTCATGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CCA 90 bp | GTGCTTCCACAGCAGCTGCAGCACTTCAAAGACTCGGCACTGCAATaGCTCCATTCCAGAATATTCTGGTTTAACCTGGGAGGTTACCAC | + |
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Preference number: 1 (lower is better) Translates to: VLPQQLQHFKDSALQ*LHSRIFWFNLGGYH Trigger: GTGGTAACCTCCCAGGTTAAACCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAGCTGCTGTGGAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 90 bp | TGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTaGCGGTCAAAAGGACAGAACCAGCCTCCCTTTGAATGTTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: WFNLGGYHCPRKNRN*RSKGQNQPPFECCC Trigger: ACAGCAACATTCAAAGGGAGGCTGGTTCTGTCCTTTTGACCGTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 90 bp | GAACTCCACAAACCACTGAAGAAGTCCTGCCTACATGTCGTCAACTaGCACCCAACCATATCACCTTCTTTCTTCCAACCTCTGGATGAT | + |
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Preference number: 1 (lower is better) Translates to: ELHKPLKKSCLHVVN*HPTISPSFFQPLDD Trigger: ATCATCCAGAGGTTGGAAGAAAGAAGGTGATATGGTTGGGTGGCAGTTGACGACATGTAGGCAGGACTTCTTCAGTGGTTTGTGGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 90 bp | ATGATACAGTGGAAACAAGAGCCTTGCCGACGATGGCTGAAGTGCTaGCAAGGGCAGGAAATTAAAACTGCCCAAAAAGAACCACATGTG | + |
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Preference number: 1 (lower is better) Translates to: MIQWKQEPCRRWLKC*QGQEIKTAQKEPHV Trigger: CACATGTGGTTCTTTTTGGGCAGTTTTAATTTCCTGCCCTTGTCAGCACTTCAGCCATCGTCGGCAAGGCTCTTGTTTCCACTGTATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 90 bp | TTTTCTTATTTATTTTGTGTGAGTTCACATGCCACGGTGCACACATaGAGGTCGGAGGTCAACTTTCAACTCAAGCCTTTCATCACGGGG | + |
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Preference number: 1 (lower is better) Translates to: FSYLFCVSSHATVHT*RSEVNFQLKPFITG Trigger: CCCCGTGATGAAAGGCTTGAGTTGAAAGTTGACCTCCGACCTTCATGTGTGCACCGTGGCATGTGAACTCACACAAAATAAATAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 90 bp | CAAAAAGAACCACATGTGTTTAGGGACACATTTCCTGAAGTTCAATaGCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAAACCGG | + |
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Preference number: 1 (lower is better) Translates to: QKEPHVFRDTFPEVQ*HSHLTEEKTYPLNR Trigger: CCGGTTTAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAATGTGTCCCTAAACACATGTGGTTCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCAAACCCACCCAAGTGTaGGGGCAGAGGGGCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RREVCVLSTPGLVTGFRTKPTQV*GQRGCS Trigger: GGAGCAGCCCCTCTGCCCCCACACTTGGGTGGGTTT...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGGAAGACAACACGCACTaGAGCAGGCACAGAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWEDNTH*SRHRGA Trigger: AGCCCCTCTGTGCCTGCTCCAGTGCGTGTTGTCTTC...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGGCGCTTTGGAAGAAGTaGCAGGGACCATGGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWALWKK*QGPWIS Trigger: GGAGATCCATGGTCCCTGTCACTTCTTCCAAAGCGC...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTGGAACTCAGGGTTTTaGGACTGGCAGCCTTTACCC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWWNSGF*DWQPLP Trigger: GGGTAAAGGCTGCCAGTCTCAAAACCCTGAGTTCCA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTATGACCCGTGCCAGCCTCCAAAACAGAGCTCAGACACCGAACACCAGTTATGGAAACAAGAGCCTTaGCGACGATGGCTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: FYDPCQPPKQSSDTEHQLWKQEP*RRWLKC Trigger: GCACTTCAGCCATCGTCGGCAAGGCTCTTGTTTCCA...TAACTGGTGTTCGGTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGACCTTTTATGACCCGTaGCAGCCTCCAAAACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWTFYDP*QPPKQS Trigger: GCTCTGTTTTGGAGGCTGGCACGGGTCATAAAAGGT...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CAA 90 bp | CTCTCTTCCTCACCCAGGTCCCAAACGTGCTTCTGGCAGTCCTCCTaGAGAGCTGGAGGGTTCAGTTTTAAAATAAACTTAACCAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LSSSPRSQTCFWQSS*RAGGFSFKINLTSV Trigger: AACGCTGGTTAAGTTTATTTTAAAACTGAACCCTCCAGCTCTCAAGGAGGACTGCCAGAAGCACGTTTGGGACCTGGGTGAGGAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGAACTCCACAAACCACTaGAGAAGTCCTGCCTACATG | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWNSTNH*RSPAYM Trigger: CATGTAGGCAGGACTTCTTCAGTGGTTTGTGGAGTT...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGCGATGGCTGAAGTGCTaGCAAGGGCAGGAAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWRWLKC*QGQEIK Trigger: TTTAATTTCCTGCCCTTGTCAGCACTTCAGCCATCG...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGAACCTAGTGTGTGGATaGTACAGTGGAAACAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWNLVCG*YSGNKS Trigger: GCTCTTGTTTCCACTGTATCATCCACACACTAGGTT...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGAGTCTTTATTCTGCCTaGTACACAGAAGAGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWSLYSA*YTEELT Trigger: GGTCAGCTCTTCTGTGTAGCAGGCAGAATAAAGACT...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTATGACCCGTGCCAGCCTCCAAAACAGAGCTCAGACACCGAACACCAGTTACGCATCTGTAAAATCTaGAACTGGGTCTCAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FYDPCQPPKQSSDTEHQLRICKI*NWVSGD Trigger: ATCTCCTGAGACCCAGTTGCAGATTTTACAGATGCG...TAACTGGTGTTCGGTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACTCCCAAACGTGCTTCTaGCAGTCCTCCTTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: YSGLTWEVTTVQGRTETDSQTCF*QSSLRA Trigger: AGCTCTCAAGGAGGACTGCCAGAAGCACGTTTGGGA...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCAACAAAATGTCTACCTaGAAAGCCAAGGGGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RREVCVLSTPGLVTGFRTNKMST*KAKGAK Trigger: TTTGGCCCCCTTGGCTTTGCAGGTAGACATTTTGTT...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACGTGTGGATGATACAGTaGAAACAAGAGCCTTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: YSGLTWEVTTVQGRTETDVWMIQ*KQEPCR Trigger: TCGGCAAGGCTCTTGTTTCCACTGTATCATCCACAC...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACATCTCTTTGAACTTCTaGTGTTCTTCCCTCGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QKGGLCPINSRISYWIQNISLNF*CSSLGH Trigger: GTGACCGAGGGAAGAACACCAGAAGTTCAAAGAGAT...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CAA 90 bp | AAGTCTAATAACTGGAATCTCGATATGAGAGGGAGGAGAAGCGCTTaGGAAGAAGTGACAGGGACCATGGATCTCCTTCCTAATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KSNNWNLDMRGRRSA*EEVTGTMDLLPNFS Trigger: ACTGAAATTAGGAAGGAGATCCATGGTCCCTGTCACTTCTTCCAAAGCGCTTCTCCTCCCTCTCATATCGAGATTCCAGTTATTAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACTTTTGTTTTGTTTCCTaGGGCAAGGTCTCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QKGGLCPINSRISYWIQNFCFVS*GKVSLC Trigger: ACACAGAGAGACCTTGCCTCAGGAAACAAAACAAAA...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGGAAGATTCTGAAGATTaGTTTGTAAACCTAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LQHFKDSALQWLHSRIFWEDSED*FVNLGF Trigger: GAAGCCTAGGTTTACAAAGCAATCTTCAGAATCTTC...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACTCCTCCCTTCCAAGATaGAGAGAGAAAGCCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: YSGLTWEVTTVQGRTETDSSLPR*REKALL Trigger: AAGTAAGGCTTTCTCTCTGCATCTTGGAAGGGAGGA...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCCGGGGAAACAAGAGTTaGGGCTATAATCAAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RREVCVLSTPGLVTGFRTRGNKS*GYNQKE Trigger: TTCCTTTTGATTATAGCCCCAACTCTTGTTTCCCCG...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAGCTACACAGAAGAGCTaGCCAGCACACACAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPATQKS*PAHTGQ Trigger: TTGTCCTGTGTGTGCTGGTCAGCTCTTCTGTGTAGC...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAGGTCTCAGGAGATCCTaGAGTTCTTTATTCTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLGLRRS*SSLFLD Trigger: GTCTAAGAATAAAGAACTTCAGGATCTCCTGAGACC...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CAA 90 bp | GGAAGAACAGAAACTGACGGTCAAAAGGACAGAACCAGCCTCCCTTaGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GRTETDGQKDRTSLP*NVAVRHNYTLLYLK Trigger: CTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAAAGGGAGGCTGGTTCTGTCCTTTTGACCGTCAGTTTCTGTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAACATCTATTAGACAGTaGGGAGACACAGAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPTSIRQ*GDTEGR Trigger: CCTCCCTTCTGTGTCTCCTCACTGTCTAATAGATGT...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACAGAGAGACTATAAATTaGCCTTTCTGCTCTCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: YSGLTWEVTTVQGRTETDRETIN*PFCSLN Trigger: ATTGAGAGAGCAGAAAGGGCAATTTATAGTCTCTCT...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCATCTCACGTATCTCTTTaGACTTCTGGTGTTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPSHVSL*TSGVLP Trigger: GGGAAGAACACCAGAAGTTCAAAGAGATACGTGAGA...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCATCAGCAACCTATGTCTaGCTATTCTTTACTAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPSATYV*LFFTKV Trigger: AACCTTAGTAAAGAATAGGCAGACATAGGTTGCTGA...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 72 bp | CCTGCAAAGCCAAGGGGGCCAAACCTAGTGTGTGGATaGTACAGTGGAAACAAGAGCCTTGCCGACGATGGC | + |
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Preference number: 3 (lower is better) Translates to: PAKPRGPNLVCG*YSGNKSLADDG Trigger: GCCATCGTCGGCAAGGCTCTTGTTTCCACTGTATCATCCACACACTAGGTTTGGCCCCCTTGGCTTTGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CCA 72 bp | CTCCTCTCTTCCTCACCCAGGTCCCAAACGTGCTTCTaGCAGTCCTCCTTGAGAGCTGGAGGGTTCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLSSSPRSQTCF*QSSLRAGGFSF Trigger: AAAACTGAACCCTCCAGCTCTCAAGGAGGACTGCCAGAAGCACGTTTGGGACCTGGGTGAGGAAGAGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CCA 72 bp | GTAGTCCCAGCTGTCCTGGAACTCTCTAGACCAGGCTaGTCTCGAACTCAGAGATCTACCTGCCTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: VVPAVLELSRPG*SRTQRSTCLSF Trigger: GAAGCTGAGGCAGGTAGATCTCTGAGTTCGAGACCAGCCTGGTCTAGAGAGTTCCAGGACAGCTGGGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 72 bp | ACGTGCCTCCCCCACCAGGCTACACACATGACCATTTaGAGCATGAACTGCACCACTAGCTTTGATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: TCLPHQATHMTI*SMNCTTSFDPQ Trigger: CTGAGGATCAAAGCTAGTGGTGCAGTTCATGCTGCAAATGGTCATGTGTGTAGCCTGGTGGGGGAGGCACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGGGGAGGAGAAGCGCTTaGGAAGAAGTGACAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: LQHFKDSALQWLHSRIFWGRRSA*EEVTGT Trigger: GGTCCCTGTCACTTCTTCCAAAGCGCTTCTCCTCCC...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 72 bp | TTTGATCCTCAGTTAACAGGGTGCTTCCACAGCAGCTaGAGCACTTCAAAGACTCGGCACTGCAATGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: FDPQLTGCFHSS*STSKTRHCNGS Trigger: GGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAGCTGCTGTGGAAGCACCCTGTTAACTGAGGATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR GCA 72 bp | AACTGCACCACTAGCTTTGATCCTCAGTTAACAGGGTaGTTCCACAGCAGCTGCAGCACTTCAAAGACTCGG | + |
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Preference number: 3 (lower is better) Translates to: NCTTSFDPQLTG*FHSSCSTSKTR Trigger: CCGAGTCTTTGAAGTGCTGCAGCTGCTGTGGAAGCACCCTGTTAACTGAGGATCAAAGCTAGTGGTGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACTTCTGGCAGTCCTCCTaGAGAGCTGGAGGGTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: QKGGLCPINSRISYWIQNFWQSS*RAGGFS Trigger: ACTGAACCCTCCAGCTCTCAAGGAGGACTGCCAGAA...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 72 bp | CACTTCTCTAGATCTAGGCTGAACTCCACAAACCACTaGAGAAGTCCTGCCTACATGTCGTCAACTGCCACC | + |
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Preference number: 3 (lower is better) Translates to: HFSRSRLNSTNH*RSPAYMSSTAT Trigger: GGTGGCAGTTGACGACATGTAGGCAGGACTTCTTCAGTGGTTTGTGGAGTTCAGCCTAGATCTAGAGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR TCA 72 bp | TTAAGAAAAAGAGGCACTCAGAAGGTAGGCCACACCTaGGAGCATAAGCGTGGTCCTCTCAGAAAGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRKRGTQKVGHT*EHKRGPLRKEP Trigger: TGGCTCCTTTCTGAGAGGACCACGCTTATGCTCTCAGGTGTGGCCTACCTTCTGAGTGCCTCTTTTTCTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR GCA 72 bp | GGATTAGTTACTGGATTCAGAACCTTTTATGACCCGTaGCAGCCTCCAAAACAGAGCTCAGACACCGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GLVTGFRTFYDP*QPPKQSSDTEH Trigger: GTGTTCGGTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAAGGTTCTGAATCCAGTAACTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACATGGAACTCAGGGTTTaGAGACTGGCAGCCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: QKGGLCPINSRISYWIQNMELRV*RLAAFT Trigger: GGTAAAGGCTGCCAGTCTCAAAACCCTGAGTTCCAT...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR TCA 72 bp | TGGAAACAAGAGCCTTGCCGACGATGGCTGAAGTGCTaGCAAGGGCAGGAAATTAAAACTGCCCAAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WKQEPCRRWLKC*QGQEIKTAQKE Trigger: TTCTTTTTGGGCAGTTTTAATTTCCTGCCCTTGTCAGCACTTCAGCCATCGTCGGCAAGGCTCTTGTTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR TCA 72 bp | AACTCCAGGATTAGTTACTGGATTCAGAACCTTTTATaGCCCGTGCCAGCCTCCAAAACAGAGCTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: NSRISYWIQNLL*PVPASKTELRH Trigger: GTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAAGGTTCTGAATCCAGTAACTAATCCTGGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR GCA 72 bp | AAACCACTGAAGAAGTCCTGCCTACATGTCGTCAACTaGCACCCAACCATATCACCTTCTTTCTTCCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: KPLKKSCLHVVN*HPTISPSFFQP Trigger: AGGTTGGAAGAAAGAAGGTGATATGGTTGGGTGGCAGTTGACGACATGTAGGCAGGACTTCTTCAGTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR CCA 72 bp | GCCACCCAACCATATCACCTTCTTTCTTCCAACCTCTaGATGATAGAACGGGGAAGATTTTCCAGTAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: ATQPYHLLSSNL*MIERGRFSSNV Trigger: GACGTTACTGGAAAATCTTCCCCGTTCTATCATCCAGAGGTTGGAAGAAAGAAGGTGATATGGTTGGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACGTCTCACGTATCTCTTaGAACTTCTGGTGTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKGGLCPINSRISYWIQNVSRIS*NFWCSS Trigger: GGAAGAACACCAGAAGTTCAAAGAGATACGTGAGAC...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR TCA 72 bp | AGAGAAAGCCTTACTTTCACTTCTCTAGATCTAGGCTaGACTCCACAAACCACTGAAGAAGTCCTGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RESLTFTSLDLG*TPQTTEEVLPT Trigger: TGTAGGCAGGACTTCTTCAGTGGTTTGTGGAGTTCAGCCTAGATCTAGAGAAGTGAAAGTAAGGCTTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR CCA 72 bp | TGCAATGGCTCCATTCCAGAATATTCTGGTTTAACCTaGGAGGTTACCACTGTCCAAGGAAGAACAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: CNGSIPEYSGLT*EVTTVQGRTET Trigger: AGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATATTCTGGAATGGAGCCATTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACTCACTCCTAATGTCTTaGTCCTGTCATCATCGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YSGLTWEVTTVQGRTETDSLLMS*SCHHRC Trigger: ACAACGATGATGACAGGACAAAGACATTAGGAGTGA...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACAAGAGAGACTATAAATaGCCCTTTCTGCTCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YSGLTWEVTTVQGRTETDKRDYK*PFLLSQ Trigger: TTGAGAGAGCAGAAAGGGCAATTTATAGTCTCTCTT...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACAAACAGTACAAAATGTaGTCAAGGTCATTTCCGACA | + |
|
Preference number: 3 (lower is better) Translates to: YSGLTWEVTTVQGRTETDKQYKM*SRSFPT Trigger: TGTCGGAAATGACCTTGACAACATTTTGTACTGTTT...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR GCA 72 bp | CATAACAGAGTTCTGAATAATCGCATCTGTAAAATCTaGAACTGGGTCTCAGGAGATCCTGAAGTTCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HNRVLNNRICKI*NWVSGDPEVLY Trigger: ATAAAGAACTTCAGGATCTCCTGAGACCCAGTTGCAGATTTTACAGATGCGATTATTCAGAACTCTGTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCATTTCCCTCTCTTCCTTaGTTAATTACTCAGCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPFPSLP*LITQQP Trigger: AGGTTGCTGAGTAATTAACAAAGGAAGAGAGGGAAA...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR TCA 72 bp | ATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTaGAGGTCAAGCCATCTGTGTTTAAAAGTTGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: MLLFDIIIPFFI*RSSHLCLKVVN Trigger: GTTGACAACTTTTAAACACAGATGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGCCCACCTTGGACAGGTaGCCCACCACCAGCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWPTLDR*PTTSLT Trigger: GGTGAGGCTGGTGGTGGGGCACCTGTCCAAGGTGGG...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGAGGCCCTGCAGGGCATaGGGACACCCAGAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWRPCRA*GHPEAC Trigger: ACAGGCTTCTGGGTGTCCTCATGCCCTGCAGGGCCT...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCTGGCAGTGTCAGCATaGCAGCCAGCCGCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKGGLCPINSRISYWIQNLAVSA*QPAAPA Trigger: AGCCGGAGCGGCTGGCTGCCATGCTGACACTGCCAG...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACTATCTCCGGGGTGCTTaGGCCAACGCAGGATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKGGLCPINSRISYWIQNYLRGA*ANAGWA Trigger: TGCCCATCCTGCGTTGGCTCAAGCACCCCGGAGATA...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTTGCTCCACTTTAGCTaGACATCCCCGAAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWLLHFS*TSPKAL Trigger: CAGGGCCTTCGGGGATGTCCAGCTAAAGTGGAGCAA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCGGCAGTCAGGTAGGGTaGAGTGTAGTAGTGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RREVCVLSTPGLVTGFRTGSQVG*SVVVGR Trigger: CCGCCCCACTACTACACTCCACCCTACCTGACTGCC...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAAAGGACCTTGTGGGATaGCTCGCCAGCTCGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLKDLVG*LASSEQ Trigger: CTGCTCCGAGCTGGCGAGTCATCCCACAAGGTCCTT...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAGCAGGTGAACTCCATTaGCGTGGGCCATGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLAGELH*RGPCRL Trigger: CAGCCTGCATGGCCCACGTCAATGGAGTTCACCTGC...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTGGCAGCCAGCTGGTTaGTCTCGAACCTTAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWWQPAG*SRTLTL Trigger: CAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCCGGAGGTGGTCCAGATaGACGGACGTGACGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RREVCVLSTPGLVTGFRTRRWSR*TDVTSL Trigger: TAAGGACGTCACGTCCGTGCATCTGGACCACCTCCG...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCTGCAGCAGCAGGCTCTaGATGAGGCCTAGGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RREVCVLSTPGLVTGFRTCSSRL*MRPRLA Trigger: AGCCAACCTAGGCCTCATGCAGAGCCTGCTGCTGCA...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACTATGGCGACCCACCTTaGACAGGTGCCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGLTWEVTTVQGRTETDYGDPP*TGAPPP Trigger: TGGTGGTGGGGCACCTGTCCAAGGTGGGTCGCCATA...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCCCGCATGGAGTCCACTaGCTTTCCTCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RREVCVLSTPGLVTGFRTPHGVH*LSSAAA Trigger: TGCTGCTGCAGAGGAAAGCCAGTGGACTCCATGCGG...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACGGCCATGCAGGCTGTTaGCCCAGAGAAAGCAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSGLTWEVTTVQGRTETDGHAGC*PRESNL Trigger: CAGGTTGCTTTCTCTGGGGCAACAGCCTGCATGGCC...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTACCACTGGCTTTCCTCTaGAGCAGCAGGCTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLPLAFL*SSRLCM Trigger: CATGCAGAGCCTGCTGCTGCAGAGGAAAGCCAGTGG...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTCTTCCAGAGGAGCCTaGATTTCTAGCGAGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWSSRGA*ISSEMS Trigger: TGACATCTCGCTAGAAATCCAGGCTCCTCTGGAAGA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTGGTTTAACCTGGGAGGTTACCACTGTCCAAGGAAGAACAGAAACTGACGCGTGTCTGATCAGATaGGTGGCTGTGTTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGLTWEVTTVQGRTETDACLIR*VAVFWS Trigger: TGACCAGAACACAGCCACGCATCTGATCAGACACGC...GTCAGTTTCTGTTCTTCCTTGGACAGTGGTAACCTCCCAGGTTAAACCAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACATCCTCTTCCTCGGTTaGTGTGTGTCTGTAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKGGLCPINSRISYWIQNILFLG*CVSVGF Trigger: AAAGCCTACAGACACACATCAACCGAGGAAGAGGAT...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAGTCCCACAGGCCATCTaGGGCCAGCACCAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPVPQAI*GQHQEL Trigger: AAGTTCCTGGTGCTGGCCTCAGATGGCCTGTGGGAC...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTCAGAATCCAGTCTCTaGAAGGAGTACATCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHFKDSALQWLHSRIFWSESSL*KEYINA Trigger: AGCATTGATGTACTCCTTCCAGAGACTGGATTCTGA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR CAA 72 bp | TCACCCAGGTCCCAAACGTGCTTCTGGCAGTCCTCCTaGAGAGCTGGAGGGTTCAGTTTTAAAATAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPRSQTCFWQSS*RAGGFSFKINL Trigger: TAAGTTTATTTTAAAACTGAACCCTCCAGCTCTCAAGGAGGACTGCCAGAAGCACGTTTGGGACCTGGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATGACCCGTGCCAGCCTCCAAAACAGAGCTCAGACACCGAACACCAGTTATCAATGCTTCTTCAATaGTCAGCCCCATTTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: FYDPCQPPKQSSDTEHQLSMLLQ*SAPFPY Trigger: ATATGGAAATGGGGCTGAGCATTGAAGAAGCATTGA...TAACTGGTGTTCGGTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCGAAGGAGTACATCAATaGTTCTTCAATGCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RREVCVLSTPGLVTGFRTEGVHQ*FFNAQP Trigger: GGGCTGAGCATTGAAGAAGCATTGATGTACTCCTTC...GGTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCACCTCCACAGGGGAATTaGCAGCCAGCTGGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPPPQGN*QPAGCS Trigger: AGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGG...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACCCAGAGAAAGCAACCTaGAGGGATAAGTTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKGGLCPINSRISYWIQNPEKAT*RDKFLV Trigger: AACGAGAAACTTATCCCTCCAGGTTGCTTTCTCTGG...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAGATTCCTTGCAGAATTaGAGATCCAGTAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLDSLQN*RSSRTQ Trigger: CTGTGTCCTACTGGATCTTCAATTCTGCAAGGAATC...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAATCTGCTCCAAGGTCTaGTGGGACATCAGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPICSKV*WDIRDT Trigger: GGTGTCCCTGATGTCCCATCAGACCTTGGAGCAGAT...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR CCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCATTCTGGTCAGCCGCATaGAGTCCACTGGCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPFWSAA*SPLAFL Trigger: GAGGAAAGCCAGTGGACTCCATGCGGCTGACCAGAA...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCATTTGCTACATGCAGGTaGACTCCATTGACGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPFATCR*TPLTWA Trigger: GGCCCACGTCAATGGAGTTCACCTGCATGTAGCAAA...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| 3UTR CAA 72 bp | GAAACTGACGGTCAAAAGGACAGAACCAGCCTCCCTTaGAATGTTGCTGTTCGACATAATTATACCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETDGQKDRTSLP*NVAVRHNYTLL Trigger: AAGAAGGGTATAATTATGTCGAACAGCAACATTCAAAGGGAGGCTGGTTCTGTCCTTTTGACCGTCAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGGAGGTCTGTGTCCTATCAACTCCAGGATTAGTTACTGGATTCAGAACAGCAATACGATTCCTTaGAGAATTGAAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKGGLCPINSRISYWIQNSNTIP*RIEDPV Trigger: TACTGGATCTTCAATTCTGCAAGGAATCGTATTGCT...GTTCTGAATCCAGTAACTAATCCTGGAGTTGATAGGACACAGACCTCCCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAGAATTGGCAGCCAGCTaGTTGCTCTCGAACCTTAAC | + |
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Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPELAAS*LLSNLN Trigger: GTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTC...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR GCA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCACTTCATGTTTTCCGTTaGTTCCTCCATCTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPLHVFR*FLHLLQ Trigger: TTGGAGCAGATGGAGGAAGCAACGGAAAACATGAAG...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| 3UTR CAA 72 bp | CATTCAAAACTAGTCTTTCCTACAGCTTTATTAACTTaGGAAATCAACAGCACGGCACTGTTTACACATAAA | + |
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Preference number: 4 (lower is better) Translates to: HSKLVFPTALLT*EINSTALFTHK Trigger: TTTATGTGTAAACAGTGCCGTGCTGTTGATTTCCAAAGTTAATAAAGCTGTAGGAAAGACTAGTTTTGAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | GGTCTTTGGTCCAGGTCCGGCTTATGGCGACCCACCTTGGACAGGTaGCCCACCACCAGCCTCACCACGTCCTCATTCCCCAGCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: GLWSRSGLWRPTLDR*PTTSLTTSSFPSMS Trigger: GGACATGCTGGGGAATGAGGACGTGGTGAGGCTGGTGGTGGGGCACCTGTCCAAGGTGGGTCGCCATAAGCCGGACCTGGACCAAAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | TGCATGAGGCCTAGGTTGGCTGGTCTTTGGTCCAGGTCCGGCTTATaGCGACCCACCTTGGACAGGTGCCCCACCACCAGCCTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: CMRPRLAGLWSRSGL*RPTLDRCPTTSLTT Trigger: CGTGGTGAGGCTGGTGGTGGGGCACCTGTCCAAGGTGGGTCGCCATAAGCCGGACCTGGACCAAAGACCAGCCAACCTAGGCCTCATGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | CTCTGCAGCAGCAGGCTCTGCATGAGGCCTAGGTTGGCTGGTCTTTaGTCCAGGTCCGGCTTATGGCGACCCACCTTGGACAGGTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LCSSRLCMRPRLAGL*SRSGLWRPTLDRCP Trigger: GGGGCACCTGTCCAAGGTGGGTCGCCATAAGCCGGACCTGGACCAAAGACCAGCCAACCTAGGCCTCATGCAGAGCCTGCTGCTGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 90 bp | GCTCCGGCTCCATCTCCCCGTACTCGTTGCTCCCGATGGCGTGTCTaGTCAGATGCGTGGCTGTGTTCTGGTCAGCCGCATGGAGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: APAPSPRTRCSRWRV*SDAWLCSGQPHGVH Trigger: GTGGACTCCATGCGGCTGACCAGAACACAGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGAGTACGGGGAGATGGAGCCGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | TATCATCCCGGTACATCCTGGCCACATCCTCTGGCAGTGTCAGCATaGCAGCCAGCCGCTCCGGCTCCATCTCCCCGTACTCGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: YHPGTSWPHPLAVSA*QPAAPAPSPRTRCS Trigger: GGAGCAACGAGTACGGGGAGATGGAGCCGGAGCGGCTGGCTGCCATGCTGACACTGCCAGAGGATGTGGCCAGGATGTACCGGGATGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | CACCATGACAGTGATATCATCCCGGTACATCCTGGCCACATCCTCTaGCAGTGTCAGCATGGCAGCCAGCCGCTCCGGCTCCATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: HHDSDIIPVHPGHIL*QCQHGSQPLRLHLP Trigger: GGGGAGATGGAGCCGGAGCGGCTGGCTGCCATGCTGACACTGCCAGAGGATGTGGCCAGGATGTACCGGGATGATATCACTGTCATGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | TCAGCCGCATGGAGTCCACTGGCTTTCCTCTGCAGCAGCAGGCTCTaGATGAGGCCTAGGTTGGCTGGTCTTTGGTCCAGGTCCGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: SAAWSPLAFLCSSRL*MRPRLAGLWSRSGL Trigger: TAAGCCGGACCTGGACCAAAGACCAGCCAACCTAGGCCTCATGCAGAGCCTGCTGCTGCAGAGGAAAGCCAGTGGACTCCATGCGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | TCGTTGCTCCCGATGGCGTGTCTGATCAGATGCGTGGCTGTGTTCTaGTCAGCCGCATGGAGTCCACTGGCTTTCCTCTGCAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPMACLIRCVAVF*SAAWSPLAFLCSSR Trigger: CCTGCTGCTGCAGAGGAAAGCCAGTGGACTCCATGCGGCTGACCAGAACACAGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | TCCATCTCCCCGTACTCGTTGCTCCCGATGGCGTGTCTGATCAGATaGGTGGCTGTGTTCTGGTCAGCCGCATGGAGTCCACTGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SISPYSLLPMACLIR*VAVFWSAAWSPLAF Trigger: GAAAGCCAGTGGACTCCATGCGGCTGACCAGAACACAGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGAGTACGGGGAGATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | ATGGCGTGTCTGATCAGATGCGTGGCTGTGTTCTGGTCAGCCGCATaGAGTCCACTGGCTTTCCTCTGCAGCAGCAGGCTCTGCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: MACLIRCVAVFWSAA*SPLAFLCSSRLCMR Trigger: CCTCATGCAGAGCCTGCTGCTGCAGAGGAAAGCCAGTGGACTCCATGCGGCTGACCAGAACACAGCCACGCATCTGATCAGACACGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | ATACCGAACATCATCCCATTCGTTTGGACGCAGGTAGCCACACCTTaGCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGGTTGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IPNIIPFVWTQVATP*RSSTGELAASWLLS Trigger: CGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGATGTTCGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | ATGTTGAGGGCCTCCGTATCAAAGCCCCTTGCGAGGACATTCCGCTaGAGCTCTTTGCTCCACTTTAGCTGGACATCCCCGAAGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: MLRASVSKPLARTFR*SSLLHFSWTSPKAL Trigger: CAGGGCCTTCGGGGATGTCCAGCTAAAGTGGAGCAAAGAGCTGCAGCGGAATGTCCTCGCAAGGGGCTTTGATACGGAGGCCCTCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 90 bp | TGTAGGCTTTCCGCAGGGCAAAGCCACCAGGTGGAGAACCACACTTaGGGGCTGATGATGCCAATGCCGGAGAAAAGGGCCTCCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: CRLSAGQSHQVENHT*GLMMPMPEKRASTS Trigger: TGAAGTGGAGGCCCTTTTCTCCGGCATTGGCATCATCAGCCCTCAAGTGTGGTTCTCCACCTGGTGGCTTTGCCCTGCGGAAAGCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 90 bp | ACACCGAGGATAGCCCGGCAGTCACCAGCATTTGCTACATGCAGGTaGACTCCATTGACGTGGGCCATGCAGGCTGTTGCCCCAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPRIARQSPAFATCR*TPLTWAMQAVAPEK Trigger: TTTCTCTGGGGCAACAGCCTGCATGGCCCACGTCAATGGAGTTCACCTGCATGTAGCAAATGCTGGTGACTGCCGGGCTATCCTCGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGGCAGGTAGCCACACCTaGCCGGTCCTCCACAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LQHFKDSALQWLHSRIFWAGSHT*PVLHRG Trigger: TCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGC...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | GTTTTCTTCCTGGACACCGAGGATAGCCCGGCAGTCACCAGCATTTaGTACATGCAGGTGAACTCCATTGACGTGGGCCATGCAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VFFLDTEDSPAVTSI*YMQVNSIDVGHAGC Trigger: ACAGCCTGCATGGCCCACGTCAATGGAGTTCACCTGCATGTAGCAAATGCTGGTGACTGCCGGGCTATCCTCGGTGTCCAGGAAGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | CCATTGACGTGGGCCATGCAGGCTGTTGCCCCAGAGAAAGCAACCTaGAGGGATAAGTTTCTCGTTACCTCATCTTCCAGAGGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLTWAMQAVAPEKAT*RDKFLVTSSSRGAW Trigger: CCAGGCTCCTCTGGAAGATGAGGTAACGAGAAACTTATCCCTCCAGGTTGCTTTCTCTGGGGCAACAGCCTGCATGGCCCACGTCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGCTATCTCCGGGGTGCTaGAGCCAACGCAGGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: LQHFKDSALQWLHSRIFWLSPGC*SQRRMG Trigger: GCCCATCCTGCGTTGGCTCAAGCACCCCGGAGATAG...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | CTTGAGCCAACGCAGGATGGGCAGCAAAGGCTTCATGTTTTCCGTTaGTTCCTCCATCTGCTCCAAGGTCTGATGGGACATCAGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: LEPTQDGQQRLHVFR*FLHLLQGLMGHQGH Trigger: GTGTCCCTGATGTCCCATCAGACCTTGGAGCAGATGGAGGAAGCAACGGAAAACATGAAGCCTTTGCTGCCCATCCTGCGTTGGCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | GTAGCCACACCTTGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTaGTTGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VATPCRSSTGELAAS*LLSNLNTEFGTPLL Trigger: CAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | TGGTCACAGGTAAGAGGTAAACATGACCAGGCACCGTTTTCTTCCTaGACACCGAGGATAGCCCGGCAGTCACCAGCATTTGCTACATGC | + |
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Preference number: 5 (lower is better) Translates to: WSQVRGKHDQAPFSS*TPRIARQSPAFATC Trigger: GCATGTAGCAAATGCTGGTGACTGCCGGGCTATCCTCGGTGTCCAGGAAGAAAACGGTGCCTGGTCATGTTTACCTCTTACCTGTGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 90 bp | TGTTCCCTCTTAAGCCGGGACAGCTCAGCCTCATTCCAGGCGTTGTaGTCACAGGTAAGAGGTAAACATGACCAGGCACCGTTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CSLLSRDSSASFQAL*SQVRGKHDQAPFSS Trigger: GGAAGAAAACGGTGCCTGGTCATGTTTACCTCTTACCTGTGACCACAACGCCTGGAATGAGGCTGAGCTGTCCCGGCTTAAGAGGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 90 bp | GCTGGTTGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTTaGAATCAAGGACCTTGTGGGATGACTCGCCAGCTCGGAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AGCSRTLTLNLVLRC*NQGPCGMTRQLGAG Trigger: ACCTGCTCCGAGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCACTTCAAAGACTCGGCACTGCAATGGCTCCATTCCAGAATATTCTGGTTGGCAGCCAGCTGGTaGCTCTCGAACCTTAACACT | + |
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Preference number: 5 (lower is better) Translates to: LQHFKDSALQWLHSRIFWLAASW*LSNLNT Trigger: AGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAA...CCAGAATATTCTGGAATGGAGCCATTGCAGTGCCGAGTCTTTGAAGTGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTAGGGCCATGCAGGCTGTaGCCCCAGAGAAAGCAACCT | + |
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Preference number: 5 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLGPCRL*PQRKQP Trigger: AGGTTGCTTTCTCTGGGGCAACAGCCTGCATGGCCC...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | TTTTATGACCCGTGCCAGCCTCCAAAACAGAGCTCAGACACCGAACACCAGTTAGGCAGTCACCAGCATTaGCTACATGCAGGTGAACTC | + |
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Preference number: 5 (lower is better) Translates to: FYDPCQPPKQSSDTEHQLGSHQH*LHAGEL Trigger: GAGTTCACCTGCATGTAGCAAATGCTGGTGACTGCC...TAACTGGTGTTCGGTGTCTGAGCTCTGTTTTGGAGGCTGGCACGGGTCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 90 bp | TGTCAGAATCCAGTCTCTGGAAGGAGTACATCAATGCTTCTTCAATaGTCAGCCCCATTTCCATATGCAGGTCAAGGAGCTCCTGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: CQNPVSGRSTSMLLQ*SAPFPYAGQGAPAN Trigger: ATTGGCAGGAGCTCCTTGACCTGCATATGGAAATGGGGCTGAGCATTGAAGAAGCATTGATGTACTCCTTCCAGAGACTGGATTCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTGAAGTTCAATGCCACAGCCACCTGACAGAGGAGAAAACTTATCCTCTATTTGGTACTCCGTTGTaGAAATCAAGGACCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPEVQCHSHLTEEKTYPLFGTPL*KSRTLW Trigger: CCACAAGGTCCTTGATTTCAACAACGGAGTACCAAA...TAGAGGATAAGTTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAGCTTCATGTTTTCCGTaGCTTCCTCCATCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPASCFP*LPPSAP Trigger: TGGAGCAGATGGAGGAAGCAACGGAAAACATGAAGC...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS-3UTR CAA 90 bp | TTGAATGTTGCTGTTCGACATAATTATACCCTTCTTTATCTGAAGGTCAAGCCAAATCCTCTTCCTCGGTaGATGTGTGTCTGTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LNVAVRHNYTLLYLKVKPNPLPR*MCVCRL Trigger: AAGCCTACAGACACACATCAACCGAGGAAGAGGATT...TGGCTTGACCTTCAGATAAAGAAGGGTATAATTATGTCGAACAGCAACATTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | TCCAGGTCCGGCTTATGGCGACCCACCTTGGACAGGTaGCCCACCACCAGCCTCACCACGTCCTCATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SRSGLWRPTLDR*PTTSLTTSSFP Trigger: GGGGAATGAGGACGTGGTGAGGCTGGTGGTGGGGCACCTGTCCAAGGTGGGTCGCCATAAGCCGGACCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | GCAGCCAGCCGCTCCGGCTCCATCTCCCCGTACTCGTaGCTCCCGATGGCGTGTCTGATCAGATGCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AASRSGSISPYS*LPMACLIRCVA Trigger: AGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGAGTACGGGGAGATGGAGCCGGAGCGGCTGGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | CCTAGGTTGGCTGGTCTTTGGTCCAGGTCCGGCTTATaGCGACCCACCTTGGACAGGTGCCCCACCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRLAGLWSRSGL*RPTLDRCPTTS Trigger: GCTGGTGGTGGGGCACCTGTCCAAGGTGGGTCGCCATAAGCCGGACCTGGACCAAAGACCAGCCAACCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | GGTACATCCTGGCCACATCCTCTGGCAGTGTCAGCATaGCAGCCAGCCGCTCCGGCTCCATCTCCCCGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GTSWPHPLAVSA*QPAAPAPSPRT Trigger: AGTACGGGGAGATGGAGCCGGAGCGGCTGGCTGCCATGCTGACACTGCCAGAGGATGTGGCCAGGATGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | GTCAGCATGGCAGCCAGCCGCTCCGGCTCCATCTCCCCGTACTCGTaGCTCCCGATGGCGTGTCTGATCAGATGCGTGGCTGTGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSMAASRSGSISPYS*LPMACLIRCVAVFW Trigger: CCAGAACACAGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGAGTACGGGGAGATGGAGCCGGAGCGGCTGGCTGCCATGCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | AGCAGGCTCTGCATGAGGCCTAGGTTGGCTGGTCTTTaGTCCAGGTCCGGCTTATGGCGACCCACCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRLCMRPRLAGL*SRSGLWRPTLD Trigger: GTCCAAGGTGGGTCGCCATAAGCCGGACCTGGACCAAAGACCAGCCAACCTAGGCCTCATGCAGAGCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | AGTGATATCATCCCGGTACATCCTGGCCACATCCTCTaGCAGTGTCAGCATGGCAGCCAGCCGCTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDIIPVHPGHIL*QCQHGSQPLRL Trigger: GAGCCGGAGCGGCTGGCTGCCATGCTGACACTGCCAGAGGATGTGGCCAGGATGTACCGGGATGATATCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | ATCATCCCATTCGTTTGGACGCAGGTAGCCACACCTTaGCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IIPFVWTQVATP*RSSTGELAASW Trigger: CCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | CCGTACTCGTTGCTCCCGATGGCGTGTCTGATCAGATaGGTGGCTGTGTTCTGGTCAGCCGCATGGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PYSLLPMACLIR*VAVFWSAAWSP Trigger: TGGACTCCATGCGGCTGACCAGAACACAGCCACGCATCTGATCAGACACGCCATCGGGAGCAACGAGTACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | CATCATCCCATTCGTTTGGACGCAGGTAGCCACACCTaGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HHPIRLDAGSHT*PVLHRGIGSQL Trigger: CAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | AGGACATTCCGCTGCAGCTCTTTGCTCCACTTTAGCTaGACATCCCCGAAGGCCCTGCAGGGCATGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RTFRCSSLLHFS*TSPKALQGMRT Trigger: TGTCCTCATGCCCTGCAGGGCCTTCGGGGATGTCCAGCTAAAGTGGAGCAAAGAGCTGCAGCGGAATGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | TTCCGCAGGGCAAAGCCACCAGGTGGAGAACCACACTaGAGGGCTGATGATGCCAATGCCGGAGAAAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FRRAKPPGGEPH*RADDANAGEKG Trigger: GCCCTTTTCTCCGGCATTGGCATCATCAGCCCTCAAGTGTGGTTCTCCACCTGGTGGCTTTGCCCTGCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | CAGGTAGCCACACCTTGCCGGTCCTCCACAGGGGAATaGGCAGCCAGCTGGTTGCTCTCGAACCTTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: QVATPCRSSTGE*AASWLLSNLNT Trigger: AGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | AATACCGAACATCATCCCATTCGTTTGGACGCAGGTAGCCACACCTaGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGGTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NTEHHPIRLDAGSHT*PVLHRGIGSQLVAL Trigger: GAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGATGTTCGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | CTGGACACCGAGGATAGCCCGGCAGTCACCAGCATTTaGTACATGCAGGTGAACTCCATTGACGTGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LDTEDSPAVTSI*YMQVNSIDVGH Trigger: ATGGCCCACGTCAATGGAGTTCACCTGCATGTAGCAAATGCTGGTGACTGCCGGGCTATCCTCGGTGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | GTTTGGACGCAGGTAGCCACACCTTGCCGGTCCTCCACAGGGGAATaGGCAGCCAGCTGGTTGCTCTCGAACCTTAACACTGAATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VWTQVATPCRSSTGE*AASWLLSNLNTEFG Trigger: ACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | GCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGGTTaGTCTCGAACCTTAACACTGAATTTGGTACTCCGT | + |
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Preference number: 6 (lower is better) Translates to: AGPPQGNWQPAG*SRTLTLNLVLR Trigger: ACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | CTGGTAGATGTTGAGGGCCTCCGTATCAAAGCCCCTTaGGAGGACATTCCGCTGCAGCTCTTTGCTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: LVDVEGLRIKAP*EDIPLQLFAPL Trigger: AAGTGGAGCAAAGAGCTGCAGCGGAATGTCCTCGCAAGGGGCTTTGATACGGAGGCCCTCAACATCTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | TTAAGCCGGGACAGCTCAGCCTCATTCCAGGCGTTGTaGTCACAGGTAAGAGGTAAACATGACCAGGCACCG | + |
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Preference number: 6 (lower is better) Translates to: LSRDSSASFQAL*SQVRGKHDQAP Trigger: CGGTGCCTGGTCATGTTTACCTCTTACCTGTGACCACAACGCCTGGAATGAGGCTGAGCTGTCCCGGCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | TGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGGTaGCTCTCGAACCTTAACACTGAATTTGGTACTCCG | + |
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Preference number: 6 (lower is better) Translates to: CRSSTGELAASW*LSNLNTEFGTP Trigger: CGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | GGGTGTTCCCTCTTAAGCCGGGACAGCTCAGCCTCATTCCAGGCGTaGTGGTCACAGGTAAGAGGTAAACATGACCAGGCACCGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GCSLLSRDSSASFQA*WSQVRGKHDQAPFS Trigger: AGAAAACGGTGCCTGGTCATGTTTACCTCTTACCTGTGACCACAACGCCTGGAATGAGGCTGAGCTGTCCCGGCTTAAGAGGGAACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 72 bp | TGGTACTCCGTTGTTGAAATCAAGGACCTTGTGGGATaGCTCGCCAGCTCGGAGCAGGTCACTGACCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WYSVVEIKDLVG*LASSEQVTDLF Trigger: GAACAGGTCAGTGACCTGCTCCGAGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 72 bp | AGTCACCAGCATTTGCTACATGCAGGTGAACTCCATTaGCGTGGGCCATGCAGGCTGTTGCCCCAGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SHQHLLHAGELH*RGPCRLLPQRK Trigger: CTTTCTCTGGGGCAACAGCCTGCATGGCCCACGTCAATGGAGTTCACCTGCATGTAGCAAATGCTGGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | CCTTGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTaGTTGCTCTCGAACCTTAACACTGAATTTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: PCRSSTGELAAS*LLSNLNTEFGT Trigger: AGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | GTGGTAGGTAACCTCAGGTTTGGCAGTCAGGTAGGGTaGAGTGTAGTAGTGGGGCGGGGTAAACTGGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: VVGNLRFGSQVG*SVVVGRGKLVD Trigger: ATCTACCAGTTTACCCCGCCCCACTACTACACTCCACCCTACCTGACTGCCAAACCTGAGGTTACCTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | CTCTTAAGCCGGGACAGCTCAGCCTCATTCCAGGCGTaGTGGTCACAGGTAAGAGGTAAACATGACCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LLSRDSSASFQA*WSQVRGKHDQA Trigger: TGCCTGGTCATGTTTACCTCTTACCTGTGACCACAACGCCTGGAATGAGGCTGAGCTGTCCCGGCTTAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | GCCACACCTTGCCGGTCCTCCACAGGGGAATTGGCAGCCAGCTGGTaGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ATPCRSSTGELAASW*LSNLNTEFGTPLLK Trigger: TTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGCTGCCAATTCCCCTGTGGAGGACCGGCAAGGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | ACGCAGGATGGGCAGCAAAGGCTTCATGTTTTCCGTTaGTTCCTCCATCTGCTCCAAGGTCTGATGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: TQDGQQRLHVFR*FLHLLQGLMGH Trigger: ATGTCCCATCAGACCTTGGAGCAGATGGAGGAAGCAACGGAAAACATGAAGCCTTTGCTGCCCATCCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | TGGGCCATGCAGGCTGTTGCCCCAGAGAAAGCAACCTaGAGGGATAAGTTTCTCGTTACCTCATCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: WAMQAVAPEKAT*RDKFLVTSSSR Trigger: TCTGGAAGATGAGGTAACGAGAAACTTATCCCTCCAGGTTGCTTTCTCTGGGGCAACAGCCTGCATGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | GTAAGAGGTAAACATGACCAGGCACCGTTTTCTTCCTaGACACCGAGGATAGCCCGGCAGTCACCAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: VRGKHDQAPFSS*TPRIARQSPAF Trigger: AAATGCTGGTGACTGCCGGGCTATCCTCGGTGTCCAGGAAGAAAACGGTGCCTGGTCATGTTTACCTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | GTGTCCATCAAAAATACCGAACATCATCCCATTCGTTaGGACGCAGGTAGCCACACCTTGCCGGTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VSIKNTEHHPIR*DAGSHTLPVLH Trigger: GTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGATGTTCGGTATTTTTGATGGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | AACGCAGGATGGGCAGCAAAGGCTTCATGTTTTCCGTaGCTTCCTCCATCTGCTCCAAGGTCTGATGGGACA | + |
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Preference number: 6 (lower is better) Translates to: NAGWAAKASCFP*LPPSAPRSDGT Trigger: TGTCCCATCAGACCTTGGAGCAGATGGAGGAAGCAACGGAAAACATGAAGCCTTTGCTGCCCATCCTGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | GCCAGCTGGTTGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTaGTTGAAATCAAGGACCTTGTGGGATGACTCGCCAGCTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASWLLSNLNTEFGTP*LKSRTLWDDSPARS Trigger: GCTCCGAGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 90 bp | AGCTGGTTGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTaGAAATCAAGGACCTTGTGGGATGACTCGCCAGCTCGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SWLLSNLNTEFGTPL*KSRTLWDDSPARSR Trigger: CCTGCTCCGAGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | TGTCCATCAAAAATACCGAACATCATCCCATTCGTTTaGACGCAGGTAGCCACACCTTGCCGGTCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: CPSKIPNIIPFV*TQVATPCRSST Trigger: TGTGGAGGACCGGCAAGGTGTGGCTACCTGCGTCCAAACGAATGGGATGATGTTCGGTATTTTTGATGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | CCAGTCTCTGGAAGGAGTACATCAATGCTTCTTCAATaGTCAGCCCCATTTCCATATGCAGGTCAAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PVSGRSTSMLLQ*SAPFPYAGQGA Trigger: AGCTCCTTGACCTGCATATGGAAATGGGGCTGAGCATTGAAGAAGCATTGATGTACTCCTTCCAGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS TCA 72 bp | TCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTTaGAATCAAGGACCTTGTGGGATGACTCGCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SRTLTLNLVLRC*NQGPCGMTRQL Trigger: GAGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CCA 72 bp | GCCTGGATTTCTAGCGAGATGTCAGAATCCAGTCTCTaGAAGGAGTACATCAATGCTTCTTCAATGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AWISSEMSESSL*KEYINASSMLS Trigger: GCTGAGCATTGAAGAAGCATTGATGTACTCCTTCCAGAGACTGGATTCTGACATCTCGCTAGAAATCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | CTCTCGAACCTTAACACTGAATTTGGTACTCCGTTGTaGAAATCAAGGACCTTGTGGGATGACTCGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSNLNTEFGTPL*KSRTLWDDSPA Trigger: AGCTGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS GCA 72 bp | GATGTCAGAATCCAGTCTCTGGAAGGAGTACATCAATaGTTCTTCAATGCTCAGCCCCATTTCCATATGCAG | + |
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Preference number: 6 (lower is better) Translates to: DVRIQSLEGVHQ*FFNAQPHFHMQ Trigger: CTGCATATGGAAATGGGGCTGAGCATTGAAGAAGCATTGATGTACTCCTTCCAGAGACTGGATTCTGACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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| CDS CAA 72 bp | TTGCTCTCGAACCTTAACACTGAATTTGGTACTCCGTaGTTGAAATCAAGGACCTTGTGGGATGACTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LLSNLNTEFGTP*LKSRTLWDDSP Trigger: TGGCGAGTCATCCCACAAGGTCCTTGATTTCAACAACGGAGTACCAAATTCAGTGTTAAGGTTCGAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059588.8 |
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