Pregenerated sensors for PDLIM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028273Ensembl transcript IDs: ENSMUST00000029941.16, ENSMUST00000058626.9, ENSMUST00000090134.12, ENSMUST00000168967.9, ENSMUST00000170361.9, ENSMUST00000195975.5, ENSMUST00000196220.5, ENSMUST00000196908.5, ENSMUST00000197808.5, ENSMUST00000198381.5, ENSMUST00000200043.5, ENSMUST00000200650.5
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTaGGCCGCTACTGGAGAAGCTTCCATTTTGCAATGTGGTATCACC | + |
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Preference number: 1 (lower is better) Translates to: EDISCLPTSTGEEAT*AATGEASILQCGIT Trigger: GGTGATACCACATTGCAAAATGGAAGCTTCTCCAGTAGCGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CCA 90 bp | CACACACACACACACACACACACACACACGATGCACAAGTACACTTaGGTGATGGGGCAGCAGGAACCTGGGAACTCTATCTGGAATTTG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTMHKYT*VMGQQEPGNSIWNL Trigger: CAAATTCCAGATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CCA 90 bp | ACACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTaGGAACTCTATCTGGAATTTGAAAGCACCTTGTCCCCACAGATT | + |
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Preference number: 1 (lower is better) Translates to: THDAQVHLGDGAAGT*ELYLEFESTLSPQI Trigger: AATCTGTGGGGACAAGGTGCTTTCAAATTCCAGATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 90 bp | TTAGAGTCTAACGCTATTGAAATATCTTCATGTCAGCATAAGAGATaGAAAGCATGGCGGTCTGGACCAGGCAGCCATACACAACACAAA | + |
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Preference number: 1 (lower is better) Translates to: LESNAIEISSCQHKR*KAWRSGPGSHTQHK Trigger: TTTGTGTTGTGTATGGCTGCCTGGTCCAGACCGCCATGCTTTTCATCTCTTATGCTGACATGAAGATATTTCAATAGCGTTAGACTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR GCA 90 bp | CTCACTTCCCTAATTAGACAGGGACATTATTTGTTCATCCACCTCTaGTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAC | + |
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Preference number: 1 (lower is better) Translates to: LTSLIRQGHYLFIHL*FNQSTLQKDFLYHD Trigger: GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGTCTAATTAGGGAAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR CCA 90 bp | CAACAATCTCTTACTGGCACGACACACTTTGATCAAGAATTTCCATaGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QQSLTGTTHFDQEFP*PILLKGKTNDKSKA Trigger: TGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGGAAATTCTTGATCAAAGTGTGTCGTGCCAGTAAGAGATTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR GCA 90 bp | AACTCACCTCCCAGAGGTCACTGTTTTAGGTATGGATATACAACTTaGCATAAAACAGGCAAAGAATACAGACACAATGCCAAATTACCA | + |
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Preference number: 1 (lower is better) Translates to: NSPPRGHCFRYGYTT*HKTGKEYRHNAKLP Trigger: TGGTAATTTGGCATTGTGTCTGTATTCTTTGCCTGTTTTATGGCAAGTTGTATATCCATACCTAAAACAGTGACCTCTGGGAGGTGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR GCA 90 bp | TACAATGAGCTCTATTACTCTCTGCTGAATCTGCCTCCTCATGTTTaGTCTATGGGAGAATTTACAATCAACTTTGAACATTCCTTAATG | + |
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Preference number: 1 (lower is better) Translates to: YNELYYSLLNLPPHV*SMGEFTINFEHSLM Trigger: CATTAAGGAATGTTCAAAGTTGATTGTAAATTCTCCCATAGAGCAAACATGAGGAGGCAGATTCAGCAGAGAGTAATAGAGCTCATTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR TCA 90 bp | TCTGCCTCCTCATGTTTGCTCTATGGGAGAATTTACAATCAACTTTaGACATTCCTTAATGATGAACCTGAAAGTAAACTTAAGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: SASSCLLYGRIYNQL*TFLNDEPESKLKNC Trigger: ACAGTTCTTAAGTTTACTTTCAGGTTCATCATTAAGGAATGTTCAAAGTTGATTGTAAATTCTCCCATAGAGCAAACATGAGGAGGCAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGATGCACAAGTACACTTaGGTGATGGGGCAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LKTFPASLQAQVRRQPGPMHKYT*VMGQQE Trigger: TTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCAT...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACGATGCACAAGTACACTaGGGTGATGGGGCAGCAGGAACCTGGGAACTCTATCTGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHTHTHDAQVH*GDGAAGTWELYLEF Trigger: AAATTCCAGATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGATGTGCAGAAAATACTaGCAATTCATAACAAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LKTFPASLQAQVRRQPGPMCRKY*QFITNA Trigger: GGCATTTGTTATGAATTGCCAGTATTTTCTGCACAT...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CAA 90 bp | ATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTaGCACTGCGGGAATCACTTTTCCGTGGAAGTGCCTCTAACCTCG | + |
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Preference number: 2 (lower is better) Translates to: MTELHMHKSINVPLN*HCGNHFSVEVPLTS Trigger: CGAGGTTAGAGGCACTTCCACGGAAAAGTGATTCCCGCAGTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR GCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGAAGGTATGTGCTAGCTaGTTAGGTGGGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKKVCAS*LGGGAG Trigger: CCCTGCTCCCCCACCTAAGCAGCTAGCACATACCTT...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR CCA 90 bp | GCACACACACACACACACACACACACACACACGATGCACAAGTACACTTGGGTGATGCCAAACTGTCTGTaGCTTTCTAAACCAAACGTT | + |
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Preference number: 2 (lower is better) Translates to: AHTHTHTHTHTMHKYTWVMPNCL*LSKPNV Trigger: AACGTTTGGTTTAGAAAGCCACAGACAGTTTGGCAT...CACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGCTATGGTTAGAACTCACCTCCCAGAGGTCACTGTTTTAGGTATGGATACTCTATCTGGAATTTaGAAGCACCTTGTCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LLAMVRTHLPEVTVLGMDTLSGI*KHLVPT Trigger: TGTGGGGACAAGGTGCTTTCAAATTCCAGATAGAGT...ATCCATACCTAAAACAGTGACCTCTGGGAGGTGAGTTCTAACCATAGCCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCAAGGTATGTGCTAGCTaGTTAGGTGGGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFKVCAS*LGGGAG Trigger: CCCTGCTCCCCCACCTAAGCAGCTAGCACATACCTT...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR TCA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACTCAGGACAGATGCCTTaGAAGTTCTTAGGGAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: EMTELHMHKSINVPLNLHSGQMP*KFLGRL Trigger: TAACCTCCCTAAGAACTTTCAAGGCATCTGTCCTGA...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR GCA 90 bp | TTAAGCTGTAACTCAGCAGGATCACACGCTTTTATTCATTATAGAAACGAAGAACCTGACTACAGGCGGTaGCTGCATGATGCTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSCNSAGSHAFIHYRNEEPDYRR*LHDAVL Trigger: GAGCACAGCATCATGCAGGCACCGCCTGTAGTCAGG...TTCTTCGTTTCTATAATGAATAAAAGCGTGTGATCCTGCTGAGTTACAGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CAA 90 bp | GGGCCGCTACTGGAGAAGCTTCCATTTTGCAATGTGGTATCACCCTaGCTGTTCATTGATCTCCCAGTTCATTACTATCTGCATATAATA | + |
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Preference number: 2 (lower is better) Translates to: GPLLEKLPFCNVVSP*LFIDLPVHYYLHII Trigger: TATTATATGCAGATAGTAATGAACTGGGAGATCAATGAACAGCAAGGGTGATACCACATTGCAAAATGGAAGCTTCTCCAGTAGCGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR TCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAGAAAGAAAACGTGAATaGAAGGTATGTGCTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HPPLLQPINLTKRLPVPRERKRE*KVCASC Trigger: GCAGCTAGCACATACCTTTCATTCACGTTTTCTTTC...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACGAAAGAAAACGTGAATaGAAGGTATGTGCTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDERKRE*KVCASC Trigger: GCAGCTAGCACATACCTTTCATTCACGTTTTCTTTC...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGGCTATGGTTAGAACTCACCTCCCAGAGGTCACTGTTTTAGGTATGGATAGAATACAGACACAATaGCAAATTACCAAGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LLAMVRTHLPEVTVLGMDRIQTQ*QITKPH Trigger: GTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCT...ATCCATACCTAAAACAGTGACCTCTGGGAGGTGAGTTCTAACCATAGCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CCA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACCCTGGGAACTCTATCTaGAATTTGAAAGCACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: EMTELHMHKSINVPLNLHPGNSI*NLKAPC Trigger: ACAAGGTGCTTTCAAATTCCAGATAGAGTTCCCAGG...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR TCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCGAAAGAAAACGTGAATaGAAGGTATGTGCTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFERKRE*KVCASC Trigger: GCAGCTAGCACATACCTTTCATTCACGTTTTCTTTC...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTTACCACGACCATGACTaGAGCAGTGAGAATAGATGT | + |
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Preference number: 2 (lower is better) Translates to: KTSIEQRYRQLYYNSFQAYHDHD*SSENRC Trigger: ACATCTATTCTCACTGCTTCAGTCATGGTCGTGGTA...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGTTTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGGCAATTCATAACAAATaGCAAACTGTCTGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: IRFKALLLPSVDSHSYYPAIHNK*QTVCGF Trigger: AAAGCCACAGACAGTTTGGCATTTGTTATGAATTGC...CGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAAACCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCTGTAACTCAGCAGGATCACACGCTTTTATTCATTATAGAAACGAAGAAGATCAAGAATTTCCATaGCCCATCTTACTGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSCNSAGSHAFIHYRNEEDQEFP*PILLKG Trigger: ACCTTTCAGTAAGATGGGCCATGGAAATTCTTGATC...TTCTTCGTTTCTATAATGAATAAAAGCGTGTGATCCTGCTGAGTTACAGCTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGGATGCACAAGTACACTaGGGTGATGGGGCAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LKTFPASLQAQVRRQPGPDAQVH*GDGAAG Trigger: TCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATC...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR GCA 72 bp | GACAAAGCCCCAGCATTGACTTCTGAAGACATTTCCTaGCTCCCTACAAGCACAGGTGAGGAGGCAACCTGG | + |
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Preference number: 3 (lower is better) Translates to: DKAPALTSEDIS*LPTSTGEEATW Trigger: CCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAGAAGTCAATGCTGGGGCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | AGGCAGCCATACACAACACAAACAAACTGCCCCATCTaGAGGCGGCCAGCATCTGGGAGAACATCAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: RQPYTTQTNCPI*RRPASGRTSEE Trigger: CTCTTCTGATGTTCTCCCAGATGCTGGCCGCCTTCAGATGGGGCAGTTTGTTTGTGTTGTGTATGGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | ACACACACACACACACGATGCACAAGTACACTTGGGTaGTGGGGCAGCAGGAACCTGGGAACTCTATCTGGA | + |
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Preference number: 3 (lower is better) Translates to: THTHTRCTSTLG*WGSRNLGTLSG Trigger: TCCAGATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CCA 72 bp | ACACACACACACACACACACGATGCACAAGTACACTTaGGTGATGGGGCAGCAGGAACCTGGGAACTCTATC | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTMHKYT*VMGQQEPGNSI Trigger: GATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CAA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTCTGGCACGACACACTTaGATCAAGAATTTCCATGGC | + |
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Preference number: 3 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSLARHT*IKNFHG Trigger: GCCATGGAAATTCTTGATCAAAGTGTGTCGTGCCAG...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CCA 72 bp | GCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTaGGAACTCTATCTGGAATTTGAAAGCACCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: AQVHLGDGAAGT*ELYLEFESTLS Trigger: GGACAAGGTGCTTTCAAATTCCAGATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CAA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACCCGGGCAAGGAGGTTTaGAACCTTCAGTTAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: EMTELHMHKSINVPLNLHPGKEV*NLQLET Trigger: TGTCTCTAACTGAAGGTTCAAAACCTCCTTGCCCGG...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | CTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTaGACTTGCACTGCGGGAATCACTTTTCCGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LSCTCTKALMFH*TCTAGITFPWK Trigger: CTTCCACGGAAAAGTGATTCCCGCAGTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR GCA 72 bp | GTCATGCACTATGGTTTCCATCTGGGCTTTATCGAGTaGAGCCTTCTAAACATACATCTAGCAGGAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VMHYGFHLGFIE*SLLNIHLAGGK Trigger: CTTTCCTCCTGCTAGATGTATGTTTAGAAGGCTGCACTCGATAAAGCCCAGATGGAAACCATAGTGCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | AACGCTATTGAAATATCTTCATGTCAGCATAAGAGATaGAAAGCATGGCGGTCTGGACCAGGCAGCCATACA | + |
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Preference number: 3 (lower is better) Translates to: NAIEISSCQHKR*KAWRSGPGSHT Trigger: TGTATGGCTGCCTGGTCCAGACCGCCATGCTTTTCATCTCTTATGCTGACATGAAGATATTTCAATAGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | GAGATCACAACAATCTCTTACTGGCACGACACACTTTaGTCAAGAATTTCCATGGCCCATCTTACTGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: EITTISYWHDTL*SRISMAHLTER Trigger: CCTTTCAGTAAGATGGGCCATGGAAATTCTTGATCAAAGTGTGTCGTGCCAGTAAGAGATTGTTGTGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CAA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGATTCAGGACAGATGCCTaGAAAGTTCTTAGGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRFRTDA*KVLREV Trigger: AACCTCCCTAAGAACTTTCAAGGCATCTGTCCTGAA...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR TCA 72 bp | TTAGAGAGACAGTATCAATGTAGGACCATCCAAGCCTaGACAATGAGAAATTGGAGGAGGGACTTAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LERQYQCRTIQA*TMRNWRRDLKS Trigger: TGACTTTAAGTCCCTCCTCCAATTTCTCATTGTTCAGGCTTGGATGGTCCTACATTGATACTGTCTCTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR CCA 72 bp | CTTACTGGCACGACACACTTTGATCAAGAATTTCCATaGCCCATCTTACTGAAAGGTAAGACCAATGATAAG | + |
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Preference number: 3 (lower is better) Translates to: LTGTTHFDQEFP*PILLKGKTNDK Trigger: CTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGGAAATTCTTGATCAAAGTGTGTCGTGCCAGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| 3UTR-3UTR CAA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCGTTCACAACCGGAAATaGTTAGGAAAGCACACCAAT | + |
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Preference number: 3 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFVHNRK*LGKHTN Trigger: ATTGGTGTGCTTTCCTAACAATTTCCGGTTGTGAAC...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR TCA 72 bp | ACCTTACAAAAAGACTTCCTGTACCACGACCATGACTaGAGCAGTGAGAATAGATGTAAATACATTGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: TLQKDFLYHDHD*SSENRCKYIEG Trigger: CCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCATGGTCGTGGTACAGGAAGTCTTTTTGTAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| 3UTR GCA 72 bp | CTAATTAGACAGGGACATTATTTGTTCATCCACCTCTaGTTCAACCAATCAACCTTACAAAAAGACTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LIRQGHYLFIHL*FNQSTLQKDFL Trigger: CAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGTCTAATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| 3UTR GCA 72 bp | CTCTATTACTCTCTGCTGAATCTGCCTCCTCATGTTTaGTCTATGGGAGAATTTACAATCAACTTTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LYYSLLNLPPHV*SMGEFTINFEH Trigger: ATGTTCAAAGTTGATTGTAAATTCTCCCATAGAGCAAACATGAGGAGGCAGATTCAGCAGAGAGTAATAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| 3UTR TCA 72 bp | TCCATTTTGCAATGTGGTATCACCCTTGCTGTTCATTaGTCTCCCAGTTCATTACTATCTGCATATAATATA | + |
|
Preference number: 3 (lower is better) Translates to: SILQCGITLAVH*SPSSLLSAYNI Trigger: TATATTATATGCAGATAGTAATGAACTGGGAGATCAATGAACAGCAAGGGTGATACCACATTGCAAAATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| 3UTR GCA 72 bp | TTTCATGTGCAGAAAATACTGGCAATTCATAACAAATaGCAAACTGTCTGTGGCTTTCTAAACCAAACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FHVQKILAIHNK*QTVCGFLNQTF Trigger: AAACGTTTGGTTTAGAAAGCCACAGACAGTTTGGCATTTGTTATGAATTGCCAGTATTTTCTGCACATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGCGGAACACACGCTGGTaGCTGTGGGCTGCCGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKTFPASLQAQVRRQPGPRNTRW*LWAAVG Trigger: TCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCG...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGCGGCATGGGCTGGGGTaGACGCAGACGATGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKTFPASLQAQVRRQPGPRHGLG*TQTMVM Trigger: CATCACCATCGTCTGCGTTCACCCCAGCCCATGCCG...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGTCTTGGTCACTTGGCTaGGGAGGCCCCACAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKTFPASLQAQVRRQPGPSWSLG*GGPTDA Trigger: GGCGTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGA...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GCACACACACACACACACACACACACACACACGATGCACAAGTACACTTGGGTGCCACCGAGGGCCTGCTaGAACCTGGGCTCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTHTMHKYTWVPPRAC*NLGSRG Trigger: GCCCCGAGAGCCCAGGTTCCAGCAGGCCCTCGGTGG...CACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGAGTGTTCGGTGGAGATaGACACTGGTCAGCACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTFPASLQAQVRRQPGPSVRWR*TLVSTK Trigger: CTTAGTGCTGACCAGTGTTCATCTCCACCGAACACT...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTTGCACAAGTGTGTCTTaGTCACTTGGCTGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSCTSVS*SLGWGG Trigger: GCCTCCCCAGCCAAGTGACCAAGACACACTTGTGCA...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTCCCTATTCTGACATGTaGCTGAGATGCCTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSPYSDM*LRCLAT Trigger: GGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGG...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| 3UTR CAA 72 bp | CACACACACACACACACACACGATGCACAAGTACACTaGGGTGATGGGGCAGCAGGAACCTGGGAACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHDAQVH*GDGAAGTWELY Trigger: ATAGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | GCACACACACACACACACACACACACACACACGATGCACAAGTACACTTGGGTGATTCTGACATGTGCCTaGGATGCCTTGCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTHTMHKYTWVILTCA*DALPPS Trigger: GGATGGTGGCAAGGCATCTCAGGCACATGTCAGAAT...CACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTGGATGTGACTTTTGGTaGAGACACAGAACCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSGCDFW*RHRTKG Trigger: CCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCC...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACGGAACACACGCTGGTaGCTGTGGGCTTCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRRNTRW*LWASGR Trigger: CCGTCCAGAAGCCCACAGTCACCAGCGTGTGTTCCG...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACCCCTCTGCTAGCTCCTaGGCAGACTCGGAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: EMTELHMHKSINVPLNLHPSASS*ADSEHT Trigger: CGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGG...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACCCTCTGCTAGCTCCTaGGCAGACTCGGAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRPSASS*ADSEHT Trigger: CGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGG...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCCCACAGATGCTCAGTCCCAGTaGTCTGGGCAAGGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRHFYCLLWILIATTRPTDAQSQ*SGQGSG Trigger: TCCGGATCCTTGCCCAGATCACTGGGACTGAGCATC...TGTGGGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTTGGCATCACTGTGAGTaGGTATGTGATAAAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSWHHCE*VCDKTP Trigger: CGGAGTTTTATCACATACCCACTCACAGTGATGCCA...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| 3UTR CAA 72 bp | CAGCAGCACAAAGACCTAACGGACAAAGCCCCAGCATaGACTTCTGAAGACATTTCCTGCCTCCCTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQHKDLTDKAPA*TSEDISCLPTS Trigger: GCTTGTAGGGAGGCAGGAAATGTCTTCAGAAGTCAATGCTGGGGCTTTGTCCGTTAGGTCTTTGTGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGCCCTCTGCTAGCTCCTaGGCAGACTCGGAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKPSASS*ADSEHT Trigger: CGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGG...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAGATGCTCAGTCCCAGTaGTCTGGGCAAGGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRDAQSQ*SGQGSG Trigger: TCCGGATCCTTGCCCAGATCACTGGGACTGAGCATC...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTGCCTTAATCTTGTTCTaGGCTTCAAGATGCGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSALILF*ASRCVI Trigger: AATGACGCATCTTGAAGCCCAGAACAAGATTAAGGC...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAAGTGGCGGCATGGGCTaGGGTGAACGCAGACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRSGGMG*GERRRW Trigger: CCATCGTCTGCGTTCACCCCAGCCCATGCCGCCACT...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGAATGTGTTTTCTTGGTaGGCCATTTTGCTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKTFPASLQAQVRRQPGPNVFSW*AILLLN Trigger: ATTAAGCAGCAAAATGGCCCACCAAGAAAACACATT...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGGATGCTCAGTCCCAGTaGTCTGGGCAAGGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKDAQSQ*SGQGSG Trigger: TCCGGATCCTTGCCCAGATCACTGGGACTGAGCATC...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAACAGCGGCCACAGGTGTaGGGGAAGCATGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AITQLEGIYLLIEKNPKQQRPQV*GKHVMK Trigger: CTTCATCACATGCTTCCCCCACACCTGTGGCCGCTG...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAAGCTGGGCCGACCAATaGCACACTGTAGTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRSWADQ*HTVVAH Trigger: ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCT...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | CACAACCGGAAATTGTTAGGAAAGCACACCAATTGTTCTAGTTTTCACGAGTCAGATGCTCAGTCCCAGTaGTCTGGGCAAGGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLLGKHTNCSSFHESDAQSQ*SGQGSG Trigger: TCCGGATCCTTGCCCAGATCACTGGGACTGAGCATC...TGACTCGTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACCCTATTCTGACATGTaGCTGAGATGCCTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRPYSDM*LRCLAT Trigger: GGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGG...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACCCCTATTCTGACATGTaGCTGAGATGCCTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDPYSDM*LRCLAT Trigger: GGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGG...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCCCACAGGTGGGCCATTTTGCTaGTTAATGTCACCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRHFYCLLWILIATTRPTGGPFC*LMSPWD Trigger: ATCCCAGGGTGACATTAAGCAGCAAAATGGCCCACC...TGTGGGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GCATCTGGGAGAACATCAGAAGAGATCACAACAATCTCTTACTGGCACGACACATCAGTCCCAGTGATCTaGGCAAGGATCCGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGRTSEEITTISYWHDTSVPVI*ARIRKE Trigger: TTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGA...TGTGTCGTGCCAGTAAGAGATTGTTGTGATCTCTTCTGATGTTCTCCCAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACAAGCTGGGCCGACCAATaGCACACTGTAGTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PWPILLKGKTNDKSKASTSWADQ*HTVVAH Trigger: ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCT...TGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCAAGCTGGGCCGACCAATaGCACACTGTAGTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPSWADQ*HTVVAH Trigger: ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCT...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGAGCTGGGCCGACCAATaGCACACTGTAGTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKSWADQ*HTVVAH Trigger: ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCT...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGACTGGTGACTGTGGGCTaGCGTGGGACATTAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRLVTVG*RGTLTA Trigger: TGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAG...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACAATCAGCCGTTTCTTaGTGGCATCACTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRQSAVS*WHHCEW Trigger: CCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGAAATCCTTGCCACCTTaGAGCCGGAAACCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLKSLPP*SRKPQG Trigger: TCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTT...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACTCAGCCGTTTCTTGCTaGCATCACTGTGAGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDSAVSC*HHCEWV Trigger: TACCCACTCACAGTGATGCCAGCAAGAAACGGCTGA...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGATCAGTCCCAGTGATCTaGGCAAGGATCCGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRSVPVI*ARIRKE Trigger: TTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGA...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAAGTAGAAGGTGCTGCTTaGTTTGGACGCTGCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AITQLEGIYLLIEKNPKQVEGAA*FGRCQL Trigger: TAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTAC...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GCACACACACACACACACACACACACACACACGATGCACAAGTACACTTGGGTGAAACATTATTACGAATaGGTTTTCCACAGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTHTMHKYTWVKHYYE*VFHRPH Trigger: GTGTGGCCTGTGGAAAACCCATTCGTAATAATGTTT...CACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACTGTCACCAGCCTCTATaGGGAATTCACATCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMTELHMHKSINVPLNLHCHQPL*GIHIHD Trigger: GTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACA...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGATGGTGGGCGTTTAGGTaGAATTTTCACAGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRWWAFR*NFHSAR Trigger: CCTGGCACTGTGAAAATTCCACCTAAACGCCCACCA...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090134.12 ENSMUST00000170361.9 |
||
| 3UTR CAA 72 bp | CTGCACATGCACAAAAGCATTAATGTTCCACTGAACTaGCACTGCGGGAATCACTTTTCCGTGGAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHMHKSINVPLN*HCGNHFSVEVP Trigger: AGGCACTTCCACGGAAAAGTGATTCCCGCAGTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CACAACCGGAAATTGTTAGGAAAGCACACCAATTGTTCTAGTTTTCACGAGTCACCCTATTCTGACATGTaGCTGAGATGCCTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLLGKHTNCSSFHESPYSDM*LRCLAT Trigger: GGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGG...TGACTCGTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGCAATCAGCCGTTTCTTaGTGGCATCACTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLQSAVS*WHHCEW Trigger: CCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAAAATCCTTGCCACCTTaGAGCCGGAAACCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRKSLPP*SRKPQG Trigger: TCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTT...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | TTAAGCTGTAACTCAGCAGGATCACACGCTTTTATTCATTATAGAAACGAAGAAGATGAAGTGGCGGCATaGGCTGGGGTGAACGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCNSAGSHAFIHYRNEEDEVAA*AGVNAD Trigger: GTCTGCGTTCACCCCAGCCCATGCCGCCACTTCATC...TTCTTCGTTTCTATAATGAATAAAAGCGTGTGATCCTGCTGAGTTACAGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAGACTGTGGGCTGCCGTaGGACATTAACTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRDCGLP*DINCRF Trigger: AAACCTGCAGTTAATGTCCCACGGCAGCCCACAGTC...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTGCTTAATGTCACCCTaGGATCCTCTTCTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLCLMSP*DPLLCP Trigger: GGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCA...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACATCAGCCGTTTCTTGCTaGCATCACTGTGAGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWPILLKGKTNDKSKASTSAVSC*HHCEWV Trigger: TACCCACTCACAGTGATGCCAGCAAGAAACGGCTGA...TGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTCAGCCGTTTCTTGCTaGCATCACTGTGAGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLSAVSC*HHCEWV Trigger: TACCCACTCACAGTGATGCCAGCAAGAAACGGCTGA...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCATCAGTCCCAGTGATCTaGGCAAGGATCCGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPSVPVI*ARIRKE Trigger: TTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGA...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTCAGTCCCAGTGATCTaGGCAAGGATCCGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLSVPVI*ARIRKE Trigger: TTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGA...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | TTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCCCACAACAGTTAAATTCTTCTaGATGCCAGGACTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRHFYCLLWILIATTRPTTVKFF*MPGLPQ Trigger: CTGGGGAAGTCCTGGCATCCAGAAGAATTTAACTGT...TGTGGGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTTTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCAAGGATCTTCCTTTaGCACCGGCCACATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRFKALLLPSVDSHSYYPPRIFL*HRPHSG Trigger: TCCTGAATGTGGCCGGTGCCAAAGGAAGATCCTTGG...CGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAAACCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTGGTGGGCGTTTAGGTaGAATTTTCACAGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLWWAFR*NFHSAR Trigger: CCTGGCACTGTGAAAATTCCACCTAAACGCCCACCA...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090134.12 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGCTGTAACTCAGCAGGATCACACGCTTTTATTCATTATAGAAACGAAGAATGGATCCTACAGGCTTaGAAGCAGCAGCGGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSCNSAGSHAFIHYRNEEWILQA*KQQRSG Trigger: TCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCA...TTCTTCGTTTCTATAATGAATAAAAGCGTGTGATCCTGCTGAGTTACAGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | GCATCTGGGAGAACATCAGAAGAGATCACAACAATCTCTTACTGGCACGACACAAGAACGTGCATTGTTTaGAATTCTCCCAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGRTSEEITTISYWHDTRTCIV*NSPSRR Trigger: CCTTCTACTGGGAGAATTTCAAACAATGCACGTTCT...TGTGTCGTGCCAGTAAGAGATTGTTGTGATCTCTTCTGATGTTCTCCCAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGATTAAGAGCACGTGCTaGAACTTCATGGTGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKIKSTC*NFMVPV Trigger: GACTGGCACCATGAAGTTTCAGCACGTGCTCTTAAT...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTTTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCGTGGGACATTAACTaGAGGTTTACCAGTGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IRFKALLLPSVDSHSYYPPWDIN*RFTSVR Trigger: CCGAACACTGGTAAACCTGCAGTTAATGTCCCACGG...CGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAAACCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGCTATGGTTAGAACTCACCTCCCAGAGGTCACTGTTTTAGGTATGGATCTCCTGGGTGCTATTTaGCTTCTTCGTATTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLAMVRTHLPEVTVLGMDLLGAI*LLRIVI Trigger: AATGACAATACGAAGAAGGCAAATAGCACCCAGGAG...ATCCATACCTAAAACAGTGACCTCTGGGAGGTGAGTTCTAACCATAGCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCAAATCCTTGCCACCTTaGAGCCGGAAACCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFKSLPP*SRKPQG Trigger: TCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTT...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGATGGCATCACTGTGAGTaGGTATGTGATAAAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRWHHCE*VCDKTP Trigger: CGGAGTTTTATCACATACCCACTCACAGTGATGCCA...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGACTGAGCTGCACATGCACAAAAGCATTAATGTTCCACTGAACTTGCACGTGGCTTGTCCTTCTTaGAGAAAAATGTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EMTELHMHKSINVPLNLHVACPS*RKMSAL Trigger: AAGGGCAGACATTTTTCTCCAAGAAGGACAAGCCAC...GTGCAAGTTCAGTGGAACATTAATGCTTTTGTGCATGTGCAGCTCAGTCATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR TCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAGTGATGGGATGGATGTaGCTTTTGGTGAAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRVMGWM*LLVKTQ Trigger: CTGTGTCTTCACCAAAAGTCACATCCATCCCATCAC...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACTCACTAAACAGAAAAGTAACATGCAGTCCGGATaGAGAGAGGTGGAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKTNDKSKASTLTKQKSNMQSG*REVEGS Trigger: ACTCCCCTCCACCTCTCTGCATCCGGACTGCATGTT...ACTTTTCTGTTTAGTGAGTGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAGATAAAACTCCGTGTTaGGCTCCACAATGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRDKTPC*APQCVF Trigger: GAAAACACATTGTGGAGCGCAACACGGAGTTTTATC...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCCAATCAGCCGTTTCTTaGTGGCATCACTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFQSAVS*WHHCEW Trigger: CCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGAGCTGAAACTTCATGGTaGCAGTCACGTAATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRAETSW*QSRNFV Trigger: CACAAAATTACGTGACTGGCACCATGAAGTTTCAGC...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACGCTGAAACTTCATGGTaGCAGTCACGTAATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDAETSW*QSRNFV Trigger: CACAAAATTACGTGACTGGCACCATGAAGTTTCAGC...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCAGGGTTACCATTTTGCTaGTTAATGTCACCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPGLPFC*LMSPWD Trigger: ATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCC...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAAGAACCAAAGGGCCGTaGTGCTTTATTGTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRRTKGP*CFIVGH Trigger: ATGGCCTACAATAAAGCACCACGGCCCTTTGGTTCT...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAATACAGACACAATGCCAAATTACCAAGCCACACTAGCTTTTACAGAGGTGGAGATGAACACTaGTCAGCACTAAGATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKEYRHNAKLPSHTSFYRGGDEH*SALRLA Trigger: TGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACC...TCTGTAAAAGCTAGTGTGGCTTGGTAATTTGGCATTGTGTCTGTATTCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCTGCTTAATGTCACCCTaGGATCCTCTTCTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFCLMSP*DPLLCP Trigger: GGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCA...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCATGGCATCACTGTGAGTaGGTATGTGATAAAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPWHHCE*VCDKTP Trigger: CGGAGTTTTATCACATACCCACTCACAGTGATGCCA...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACCGTGCTGAAACTTCATaGTGCCAGTCACGTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDRAETS*CQSRNF Trigger: AAAATTACGTGACTGGCACCATGAAGTTTCAGCACG...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | CATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACACAATGTGTTTTCTTaGTGGGCGTTTAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPPLLQPINLTKRLPVPRHNVFS*WAFRWN Trigger: ATTCCACCTAAACGCCCACCAAGAAAACACATTGTG...TCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACATTATTTGTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAATTAAGAGCACGTGCTaGAACTTCATGGTGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTLFVHPPLLQPINLTKIKSTC*NFMVPV Trigger: GACTGGCACCATGAAGTTTCAGCACGTGCTCTTAAT...TTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGACATTATTTGTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAACCAGGGTTACCATTTTaGTGCTTAATGTCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTLFVHPPLLQPINLTKPGLPF*CLMSPW Trigger: CCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGG...TTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CTACCAATTAGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGGGAATTTTCCCATTTTaGTGCTTAATGTCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIRIQRVQSSRVHNRKLGIFPF*CLMSPW Trigger: CCAGGGTGACATTAAGCAGCAAAATGGGAAAATTCC...CAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTAAATCCTTGCCACCTTaGAGCCGGAAACCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTSIEQRYRQLYYNSFQAKSLPP*SRKPQG Trigger: TCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTT...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | AGGATACAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATTGTTAGGAAAGCGTGCTGAAACTTCATaGTGCCAGTCACGTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIQRVQSSRVHNRKLLGKRAETS*CQSRNF Trigger: AAAATTACGTGACTGGCACCATGAAGTTTCAGCACG...CTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACACAATGTGTTTTCTTaGTGGGCGTTTAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPHNVFS*WAFRWN Trigger: ATTCCACCTAAACGCCCACCAAGAAAACACATTGTG...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCTGGTGGGCGTTTAGGTaGAATTTTCCCATTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVRIDVNTLKGSGHFLSIWWAFR*NFPILL Trigger: CAGCAAAATGGGAAAATTCCACCTAAACGCCCACCA...GATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
||
| 3UTR CAA 72 bp | CAACGTGTTCAGTCTTCTCGTGTTCACAACCGGAAATaGTTAGGAAAGCACACCAATTGTTCTAGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRVQSSRVHNRK*LGKHTNCSSFH Trigger: GTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATCCTTTGGCTTTGCATTTGTGAGCTACCAATTAGGATACAACGTGTTTTGGGACTAAAGACGTaGAGGGGTATCTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSILWLCICELPIRIQRVLGLKT*RGIFSF Trigger: AAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAA...AACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATCCTTTGGCTTTGCATTTGTGAGCTACCAATTAGGATACAACGTGTTGATAAAACTCCGTGTTaGGCTCCACAATGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSILWLCICELPIRIQRVDKTPC*APQCVF Trigger: GAAAACACATTGTGGAGCGCAACACGGAGTTTTATC...AACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCGATAAAACTCCGTGTTaGGCTCCACAATGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVRIDVNTLKGSGHFLSIDKTPC*APQCVF Trigger: GAAAACACATTGTGGAGCGCAACACGGAGTTTTATC...GATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACTCACTAAACAGAAAAGTCAATCAGCCGTTTCTTaGTGGCATCACTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKTNDKSKASTLTKQKSQSAVS*WHHCEW Trigger: CCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG...ACTTTTCTGTTTAGTGAGTGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | ATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCACGACGGGTATCTTTTCCTTTaGCTTCTTCGTATTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IHLCFNQSTLQKDFLYHDGYLFL*LLRIVI Trigger: AATGACAATACGAAGAAGGCAAAGGAAAAGATACCC...GTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCGGAAATTGTTAGGAAAGCACACCAATTGTTCTAGTTTTCACGAGTCAGCTGAAACTTCATGGTaGCAGTCACGTAATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNRKLLGKHTNCSSFHESAETSW*QSRNFV Trigger: CACAAAATTACGTGACTGGCACCATGAAGTTTCAGC...TGACTCGTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCGTGGAATTTTCACAGTaGCAGGGTTACCATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRIDVNTLKGSGHFLSIVEFSQ*QGYHFA Trigger: AGCAAAATGGTAACCCTGGCACTGTGAAAATTCCAC...GATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCAATTTTCCCATTTTGCTaGTTAATGTCACCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPIFPFC*LMSPWD Trigger: ATCCCAGGGTGACATTAAGCAGCAAAATGGGAAAAT...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACTCACTAAACAGAAAAGTTGCTTAATGTCACCCTaGGATCCTCTTCTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGKTNDKSKASTLTKQKSCLMSP*DPLLCP Trigger: GGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCA...ACTTTTCTGTTTAGTGAGTGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTTCAGCCGTTTCTTGCTaGCATCACTGTGAGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTSIEQRYRQLYYNSFQASAVSC*HHCEWV Trigger: TACCCACTCACAGTGATGCCAGCAAGAAACGGCTGA...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCCTTTGGCTTTGCATCGTGCTGAAACTTCATaGTGCCAGTCACGTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKYIEGVRSFPFHPLALHRAETS*CQSRNF Trigger: AAAATTACGTGACTGGCACCATGAAGTTTCAGCACG...ATGCAAAGCCAAAGGATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACATTATTTGTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAATTGGGACTAAAGACGTaGAGGGGTATCTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTLFVHPPLLQPINLTKLGLKT*RGIFSF Trigger: AAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAA...TTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR TCA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCTTGGGACTAAAGACGTaGAGGGGTATCTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFLGLKT*RGIFSF Trigger: AAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAA...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACTCACTAAACAGAAAAGTACCAAAGGGCCGTGGTaGTTTATTGTAGGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGKTNDKSKASTLTKQKSTKGPW*FIVGHV Trigger: AACATGGCCTACAATAAAGCACCACGGCCCTTTGGT...ACTTTTCTGTTTAGTGAGTGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | CCATGGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACATTGGAGAAAAATGTCTaGCCTTCCAAACTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PWPILLKGKTNDKSKASTLEKNV*PSKLSQ Trigger: TTGTGAAAGTTTGGAAGGGCAGACATTTTTCTCCAA...TGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCAGGGTATCTTTTCCTTTaGCTTCTTCGTATTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPLLQPINLTKRLPVPGYLFL*LLRIVI Trigger: AATGACAATACGAAGAAGGCAAAGGAAAAGATACCC...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTTGGCATCACTGTGAGTaGGTATGTGATAAAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTSIEQRYRQLYYNSFQAWHHCE*VCDKTP Trigger: CGGAGTTTTATCACATACCCACTCACAGTGATGCCA...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| 3UTR CAA 72 bp | CACTTTTCCGTGGAAGTGCCTCTAACCTCGAGTTCCTaGGAAAGAGTACATTTTGCTGTAGATAATTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFSVEVPLTSSS*ERVHFAVDNLK Trigger: TTTTAAATTATCTACAGCAAAATGTACTCTTTCCAAGGAACTCGAGGTTAGAGGCACTTCCACGGAAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | TTAAGCTGTAACTCAGCAGGATCACACGCTTTTATTCATTATAGAAACGAAGAAGATAAAACTCCGTGTTaGGCTCCACAATGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCNSAGSHAFIHYRNEEDKTPC*APQCVF Trigger: GAAAACACATTGTGGAGCGCAACACGGAGTTTTATC...TTCTTCGTTTCTATAATGAATAAAAGCGTGTGATCCTGCTGAGTTACAGCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| 3UTR CAA 72 bp | CAATTATTCTTATTAATAAGGTTTAAGGCACTTTTATaGCCTTCTGTGGATTCTCATAGCTACTACCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFLLIRFKALL*PSVDSHSYYPP Trigger: GGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAAACCTTATTAATAAGAATAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR GCA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTGGGTATCTTTTCCTTTaGCTTCTTCGTATTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KTSIEQRYRQLYYNSFQAGYLFL*LLRIVI Trigger: AATGACAATACGAAGAAGGCAAAGGAAAAGATACCC...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS GCA 90 bp | GAGGTGAAGCTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTaGTACTGGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EVKLQMTPVAEKAPG*YWFSQREQQTQWQP Trigger: CGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197808.5 |
||
| CDS GCA 90 bp | GAGGTGAAGCTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTaGTGGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAGCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EVKLQMTPVAEKAPG*WFSQREQQTQWQPH Trigger: ATGCGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200650.5 |
||
| CDS CCA 90 bp | GCAGCGGCCACAGGTGTGGGGGAAGCATGTGATGAAGTGGCGGCATaGGCTGGGGTGAACGCAGACGATGGTGATGGGATGGATGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AAATGVGEACDEVAA*AGVNADDGDGMDVT Trigger: AGTCACATCCATCCCATCACCATCGTCTGCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
||
| CDS CCA 90 bp | GTGAAGCTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTGCTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAGCCGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKLQMTPVAEKAPGC*FSQREQQTQWQPHH Trigger: GTGATGCGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200650.5 |
||
| CDS TCA 90 bp | TCTGTCCCTCTGCTAGCTCCTGAGCAGACTCGGAACACACGCTGGTaGCTGTGGGCTTCTGGACGGAAACCGGCTCACTCTTGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVPLLAPEQTRNTRW*LWASGRKPAHSWLQ Trigger: CTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000058626.9 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
||
| CDS CCA 90 bp | AAGCTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTGCTACTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAGCCGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: KLQMTPVAEKAPGCY*FSQREQQTQWQPHH Trigger: GTGATGCGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197808.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAGACATTTCCTGCCTCCCTACAAGCACAGGTGAGGAGGCAACCTGGGCCGGTGGATCCTACAGGCTaGAAAGCAGCAGCGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKTFPASLQAQVRRQPGPVDPTG*KAAAER Trigger: CCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCAC...CGGCCCAGGTTGCCTCCTCACCTGTGCTTGTAGGGAGGCAGGAAATGTCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS TCA 90 bp | TTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGCTAGCTCCTaGGCAGACTCGGAACACACGCTGGTGACTGTGGGCTGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMSPWDPLLCPSASS*ADSEHTLVTVGCRG Trigger: CCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
||
| CDS CCA 90 bp | ACAGTGCATCCAGAAGAGACTGGGAGTTTTCAGGGCCGAAGAGCCTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAGCCGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVHPEETGSFQGRRA*FSQREQQTQWQPHH Trigger: GTGATGCGGCTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195975.5 ENSMUST00000196220.5 |
||
| CDS TCA 90 bp | TCTCCCAGTAGAAGGTGCTGCTTGGTTTGGACGCTGCCAGCTAGGTaGCTTGACGCTGGTGGATCCTACAGGCTTGAAAGCAGCAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPSRRCCLVWTLPAR*LDAGGSYRLESSSG Trigger: TCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
||
| CDS TCA 90 bp | TTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGCTAGCTCCTaGGCAGACTCGGAACACACGCTGGTGACTGTGGGCTTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LMSPWDPLLCPSASS*ADSEHTLVTVGFWT Trigger: CGTCCAGAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000058626.9 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
||
| CDS-3UTR CAA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTTGCCAGCTAGGTGACTaGACGCTGGTGGATCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSCQLGD*TLVDPT Trigger: TGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCA...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS TCA 90 bp | ATCCCATCGATGCTGAGAACCACGTCCCCTATTCTGACATGTGCCTaGGATGCCTTGCCACCATCCTTCAGACTAGAGATTGTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSMLRTTSPILTCA*DALPPSFRLEIVRG Trigger: GCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGGTTCTCAGCATCGATGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
||
| CDS CCA 90 bp | AGAGGCTTGGGGACAGTGCTGATGCACAGTGCATCCAGAAGAGACTaGGAGTTTTCAGGGCCGAAGAGCTTTGCCTTCTTCGTATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLGTVLMHSASRRD*EFSGPKSFAFFVLS Trigger: TGACAATACGAAGAAGGCAAAGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGTGCATCAGCACTGTCCCCAAGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200043.5 |
||
| CDS TCA 90 bp | CTGCCGTGGGACATTAACTGCAGGTTTACCAGTGTTCGGTGGAGATaGACACTGGTCAGCACTAAGATTGGCACTAACATGCAGTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPWDINCRFTSVRWR*TLVSTKIGTNMQSG Trigger: TCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTAAACCTGCAGTTAATGTCCCACGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
||
| CDS GCA 90 bp | ACTGATCCCATCGATGCTGAGAACCACGTCCCCTATTCTGACATGTaGCTGAGATGCCTTGCCACCATCCTTCAGACTAGAGATTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDPIDAENHVPYSDM*LRCLATILQTRDCQ Trigger: CTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGGTTCTCAGCATCGATGGGATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
||
| CDS GCA 90 bp | GGGCGTTTAGGTGGAATTTTCACAGTGCCAGGGTTACCATTTTGCTaGTTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLGGIFTVPGLPFC*LMSPWDPLLCPSAS Trigger: GCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAAACGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS GCA 90 bp | GGTGGGCGTTTAGGTGGAATTTTCACAGTGCCAGGGTTACCATTTTaGTGCTTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRLGGIFTVPGLPF*CLMSPWDPLLCPSA Trigger: AGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAAACGCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
||
| CDS CCA 90 bp | GATGTAATGGGCACAGGCTTAACTACTTCCTTAGGTTCACCCTTCTaGACGGAAACCGGCTCACTCTTGGCTGCAGCTGAAGCTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DVMGTGLTTSLGSPF*TETGSLLAAAEALC Trigger: ACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGAACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
||
| CDS-3UTR CAA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAAGTGTGTCTTGGTCACTaGGCTGGGGAGGCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AITQLEGIYLLIEKNPKQVCLGH*AGEAPQ Trigger: CTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACAC...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS-3UTR CAA 90 bp | CACACGATGCACAAGTACACTTGGGTGATGGGGCAGCAGGAACCTGGGAACTCTAGCCTATGTAGGCCATaGTGTTTTTGCAATGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTMHKYTWVMGQQEPGNSSLCRP*CFCNEH Trigger: GTGCTCATTGCAAAAACACAATGGCCTACATAGGCT...AGAGTTCCCAGGTTCCTGCTGCCCCATCACCCAAGTGTACTTGTGCATCGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
||
| CDS GCA 90 bp | ATCGATGCTGAGAACCACGTCCCCTATTCTGACATGTGCCTGAGATaGCTTGCCACCATCCTTCAGACTAGAGATTGTCAGAGGCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: IDAENHVPYSDMCLR*LATILQTRDCQRHV Trigger: AACATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGGTTCTCAGCATCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS GCA 90 bp | TTGTTTGAAATTCTCCCAGTAGAAGGTGCTGCTTGGTTTGGACGCTaGCAGCTAGGTGACTTGACGCTGGTGGATCCTACAGGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFEILPVEGAAWFGR*QLGDLTLVDPTGLK Trigger: TTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CCA 90 bp | GGGACATTAACTGCAGGTTTACCAGTGTTCGGTGGAGATGAACACTaGTCAGCACTAAGATTGGCACTAACATGCAGTCCGGATGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTLTAGLPVFGGDEH*SALRLALTCSPDAE Trigger: CTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTAAACCTGCAGTTAATGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS CCA 90 bp | GCCAAGTGTATCCCAGAGCTTCCAGGAACATGTCACCAGCCTCTATaGGGAATTCACATCCACGACATATTGTTCCAAAAAGGGCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AKCIPELPGTCHQPL*GIHIHDILFQKGRS Trigger: ACTACGCCCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGATACACTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CCA 90 bp | TATTTGTCACGTGTGTTTTCTTCTGGACGGAAACCGGCTCACTCTTaGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTCAAGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: YLSRVFSSGRKPAHS*LQLKLFVESYSRSP Trigger: CGGGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGAAAACACACGTGACAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090134.12 |
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| CDS-3UTR CAA 90 bp | CCATGGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACCCCTGATAACTTGGTaGCAGTGGGCACACATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PWPILLKGKTNDKSKASTPLITW*QWAHMG Trigger: CCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGG...TGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | GCACACACACACACACACACACACACACACACGATGCACAAGTACACTTGGGTGGTCTGCTTCAAAGCATaGATGACTTCTCCAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AHTHTHTHTHTMHKYTWVVCFKA*MTSPRI Trigger: GATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGAC...CACCCAAGTGTACTTGTGCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS CCA 90 bp | TGTAGAGTCATATTCAAGGAGCCCGTACAAGCCTTAATCTTGTTCTaGGCTTCAAGATGCGTCATTCCCTGTGCACTGATCCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CRVIFKEPVQALILF*ASRCVIPCALIPSM Trigger: CATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACGGGCTCCTTGAATATGACTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS-3UTR CAA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAAGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AITQLEGIYLLIEKNPKQETGSL*AAAEAL Trigger: AAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTC...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS GCA 90 bp | TCTTGCTGGCATCACTGTGAGTGGGTATGTGATAAAACTCCGTGTTaGGCTCCACAATGTGTTTTCTTGGTGGGCTCTTGTAACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCWHHCEWVCDKTPC*APQCVFLVGSCNCF Trigger: AAAGCAGTTACAAGAGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058626.9 |
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| CDS-3UTR CAA 90 bp | GCATCTGGGAGAACATCAGAAGAGATCACAACAATCTCTTACTGGCACGACACAATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRTSEEITTISYWHDTIVRGM*KSLPPW Trigger: CCAAGGTGGCAAGGATTTCAACATGCCTCTGACAAT...TGTGTCGTGCCAGTAAGAGATTGTTGTGATCTCTTCTGATGTTCTCCCAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | CACAACCGGAAATTGTTAGGAAAGCACACCAATTGTTCTAGTTTTCACGAGTCAGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HNRKLLGKHTNCSSFHESETGSL*AAAEAL Trigger: AAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTC...TGACTCGTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | TGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCCTTTGGCTTTGCATGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CKYIEGVRSFPFHPLALHETGSL*AAAEAL Trigger: AAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTC...ATGCAAAGCCAAAGGATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | TTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCCCACACCACAATGTGTTTTCTaGGTGGGCCATTTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRHFYCLLWILIATTRPTPQCVF*VGHFAA Trigger: AGCAGCAAAATGGCCCACCAAGAAAACACATTGTGG...TGTGGGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | TTAAGGCACTTTTATTGCCTTCTGTGGATTCTCATAGCTACTACCCGCCCCACAGTACAAGCCTTAATCTaGTTCTGGGCTTCAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHFYCLLWILIATTRPTVQALI*FWASRC Trigger: GCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTAC...TGTGGGGCGGGTAGTAGCTATGAGAATCCACAGAAGGCAATAAAAGTGCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | ATGACTGAAGCAGTGAGAATAGATGTAAATACATTGAAGGGGTCAGGTCATTTCGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MTEAVRIDVNTLKGSGHFETGSL*AAAEAL Trigger: AAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTC...GAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | GCATCTGGGAGAACATCAGAAGAGATCACAACAATCTCTTACTGGCACGACACAGTAGTGGAAGTGACTTaGGATACAGCAGGAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASGRTSEEITTISYWHDTVVEVT*DTAGDV Trigger: TACATCTCCTGCTGTATCCAAAGTCACTTCCACTAC...TGTGTCGTGCCAGTAAGAGATTGTTGTGATCTCTTCTGATGTTCTCCCAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | GTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAAGACTTCCTGTACCAATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHPPLLQPINLTKRLPVPIVRGM*KSLPPW Trigger: CCAAGGTGGCAAGGATTTCAACATGCCTCTGACAAT...TGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | CCATGGCCCATCTTACTGAAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACAGCTCCTGGGTGCTATTaGCCTTCTTCGTATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PWPILLKGKTNDKSKASTAPGCY*PSSYCH Trigger: ATGACAATACGAAGAAGGCAAATAGCACCCAGGAGC...TGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTTCAGTAAGATGGGCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAAAGTGGCTTGTCCTTCTaGGAGAAAAATGTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AITQLEGIYLLIEKNPKQSGLSF*EKNVCP Trigger: AGGGCAGACATTTTTCTCCAAGAAGGACAAGCCACT...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | CTTTCCATCCTTTGGCTTTGCATTTGTGAGCTACCAATTAGGATACAACGTGTTATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSILWLCICELPIRIQRVIVRGM*KSLPPW Trigger: CCAAGGTGGCAAGGATTTCAACATGCCTCTGACAAT...AACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | AAAGGTAAGACCAATGATAAGAGCAAAGCAAGTACACTCACTAAACAGAAAAGTTCCAAGGATCTTCCTTaGGCACCGGCCACATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKTNDKSKASTLTKQKSSKDLP*APATFR Trigger: CCTGAATGTGGCCGGTGCCAAAGGAAGATCCTTGGA...ACTTTTCTGTTTAGTGAGTGTACTTGCTTTGCTCTTATCATTGGTCTTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | ACAGGGACATTATTTGTTCATCCACCTCTGCTTCAACCAATCAACCTTACAAAAGCCAGGGTTACCATTTaGCTGCTTAATGTCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTLFVHPPLLQPINLTKARVTI*LLNVTL Trigger: CAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGC...TTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
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| CDS GCA 90 bp | GCCTTCCAAAGCACCTTCTACAGTTCTTGTAGACCTGCTTACATTTaGCTTCTTCGTATTGTCATTTTCAGATTCTGTCAGATGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AFQSTFYSSCRPAYI*LLRIVIFRFCQMLS Trigger: ACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCTTTGGAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196220.5 ENSMUST00000197808.5 |
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| CDS-3UTR CAA 90 bp | GCGATCACACAGCTGGAGGGGATTTACTTACTGATAGAAAAGAATCCCAAACAACCTGAAGAACGTGCATaGTTTGAAATTCTCCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AITQLEGIYLLIEKNPKQPEERA*FEILPV Trigger: TACTGGGAGAATTTCAAACAATGCACGTTCTTCAGG...TTGTTTGGGATTCTTTTCTATCAGTAAGTAAATCCCCTCCAGCTGTGTGATCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029941.16 |
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| CDS-3UTR CAA 90 bp | CTTTCCATCCTTTGGCTTTGCATTTGTGAGCTACCAATTAGGATACAACGTGTTGGGGTATCTTTTCCTTaGCCTTCTTCGTATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSILWLCICELPIRIQRVGVSFP*PSSYCH Trigger: ATGACAATACGAAGAAGGCAAAGGAAAAGATACCCC...AACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | TGTAAATACATTGAAGGGGTCAGGTCATTTCCTTTCCATCCTTTGGCTTTGCATGGGGTATCTTTTCCTTaGCCTTCTTCGTATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CKYIEGVRSFPFHPLALHGVSFP*PSSYCH Trigger: ATGACAATACGAAGAAGGCAAAGGAAAAGATACCCC...ATGCAAAGCCAAAGGATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | CACAACCGGAAATTGTTAGGAAAGCACACCAATTGTTCTAGTTTTCACGAGTCAGGGGTATCTTTTCCTTaGCCTTCTTCGTATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HNRKLLGKHTNCSSFHESGVSFP*PSSYCH Trigger: ATGACAATACGAAGAAGGCAAAGGAAAAGATACCCC...TGACTCGTGAAAACTAGAACAATTGGTGTGCTTTCCTAACAATTTCCGGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 |
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| CDS-3UTR CAA 90 bp | CTTTCCATCCTTTGGCTTTGCATTTGTGAGCTACCAATTAGGATACAACGTGTTTGGAATTTTCCCATTTaGCTGCTTAATGTCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSILWLCICELPIRIQRVWNFPI*LLNVTL Trigger: CAGGGTGACATTAAGCAGCAAAATGGGAAAATTCCA...AACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
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| CDS-3UTR CAA 90 bp | AAAACAAGTATAGAGCAACGGTACAGACAACTTTATTACAACTCTTTCCAAGCTATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTSIEQRYRQLYYNSFQAIVRGM*KSLPPW Trigger: CCAAGGTGGCAAGGATTTCAACATGCCTCTGACAAT...AGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCTATACTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
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| CDS CAA 90 bp | GGACGCTGCCAGCTAGGTGACTTGACGCTGGTGGATCCTACAGGCTaGAAAGCAGCAGCGGAGCGGAGGCCAGCCACCGAGGGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRCQLGDLTLVDPTG*KAAAERRPATEGLL Trigger: CAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CAA 72 bp | CAGCTAGGTGACTTGACGCTGGTGGATCCTACAGGCTaGAAAGCAGCAGCGGAGCGGAGGCCAGCCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLGDLTLVDPTG*KAAAERRPATE Trigger: CTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS GCA 72 bp | CTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTaGTGGTTTTCGCAGCGAGAGCAGCAGACACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQMTPVAEKAPG*WFSQREQQTQW Trigger: CCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200650.5 |
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| CDS CCA 72 bp | CAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTGCTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QMTPVAEKAPGC*FSQREQQTQWQ Trigger: CTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200650.5 |
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| CDS TCA 72 bp | CTGCTAGCTCCTGAGCAGACTCGGAACACACGCTGGTaGCTGTGGGCTTCTGGACGGAAACCGGCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLAPEQTRNTRW*LWASGRKPAHS Trigger: AGAGTGAGCCGGTTTCCGTCCAGAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000058626.9 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS GCA 72 bp | CTCCAGATGACGCCGGTTGCTGAGAAGGCTCCTGGGTaGTACTGGTTTTCGCAGCGAGAGCAGCAGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LQMTPVAEKAPG*YWFSQREQQTQ Trigger: CTGTGTCTGCTGCTCTCGCTGCGAAAACCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197808.5 |
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| CDS CCA 72 bp | GTTGCAGTGGGCACACATGGGGGTCCGCTTGCCCGCTaGAATGTGTTCCGCTCTCTGCACAAGTGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VAVGTHGGPLAR*NVFRSLHKCVL Trigger: CAAGACACACTTGTGCAGAGAGCGGAACACATTCCAGCGGGCAAGCGGACCCCCATGTGTGCCCACTGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CCA 72 bp | GCAGACTCGGAACACACGCTGGTGACTGTGGGCTTCTaGACGGAAACCGGCTCACTCTTGGCTGCAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ADSEHTLVTVGF*TETGSLLAAAE Trigger: TTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000058626.9 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CCA 72 bp | ATGACGCCGGTTGCTGAGAAGGCTCCTGGGTGCTACTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MTPVAEKAPGCY*FSQREQQTQWQ Trigger: CTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197808.5 |
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| CDS CAA 90 bp | CCAGTAGAAGGTGCTGCTTGGTTTGGACGCTGCCAGCTAGGTGACTaGACGCTGGTGGATCCTACAGGCTTGAAAGCAGCAGCGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PVEGAAWFGRCQLGD*TLVDPTGLKAAAER Trigger: CCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CCA 72 bp | CCAGAAGAGACTGGGAGTTTTCAGGGCCGAAGAGCCTaGTTTTCGCAGCGAGAGCAGCAGACACAGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEETGSFQGRRA*FSQREQQTQWQ Trigger: CTGCCACTGTGTCTGCTGCTCTCGCTGCGAAAACCAGGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195975.5 ENSMUST00000196220.5 |
||
| CDS CCA 72 bp | AGACTCGGAACACACGCTGGTGACTGTGGGCTGCCGTaGGACATTAACTGCAGGTTTACCAGTGTTCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGTHAGDCGLP*DINCRFTSVRW Trigger: CCACCGAACACTGGTAAACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS CAA 72 bp | GGTGCTGCTTGGTTTGGACGCTGCCAGCTAGGTGACTaGACGCTGGTGGATCCTACAGGCTTGAAAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GAAWFGRCQLGD*TLVDPTGLKAA Trigger: TGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CAA 90 bp | CACACGCTGGTGACTGTGGGCTTCTGGACGGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTCAAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HTLVTVGFWTETGSL*AAAEALCRVIFKEP Trigger: GGGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGCCCACAGTCACCAGCGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000058626.9 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS TCA 72 bp | AGAAGGTGCTGCTTGGTTTGGACGCTGCCAGCTAGGTaGCTTGACGCTGGTGGATCCTACAGGCTTGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRCCLVWTLPAR*LDAGGSYRLES Trigger: GCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CAA 90 bp | GATGCCTTGCCACCATCCTTCAGACTAGAGATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGGAGCCGGAAACCCCAAGGAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DALPPSFRLEIVRGM*KSLPPWSRKPQGAG Trigger: CCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAACATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS GCA 72 bp | ATTCTCCCAGTAGAAGGTGCTGCTTGGTTTGGACGCTaGCAGCTAGGTGACTTGACGCTGGTGGATCCTACA | + |
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Preference number: 6 (lower is better) Translates to: ILPVEGAAWFGR*QLGDLTLVDPT Trigger: TGTAGGATCCACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CCA 72 bp | GGCACAGGCTTAACTACTTCCTTAGGTTCACCCTTCTaGACGGAAACCGGCTCACTCTTGGCTGCAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GTGLTTSLGSPF*TETGSLLAAAE Trigger: TTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGAACCTAAGGAAGTAGTTAAGCCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS CAA 72 bp | GGCCCCACAGACGCCCCTGTACCTGAAGAACGTGCATaGTTTGAAATTCTCCCAGTAGAAGGTGCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPTDAPVPEERA*FEILPVEGAAW Trigger: CCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGCACGTTCTTCAGGTACAGGGGCGTCTGTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CAA 90 bp | ACTACTTCCTTAGGTTCACCCTTCTGGACGGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTCAAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TTSLGSPFWTETGSL*AAAEALCRVIFKEP Trigger: GGGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGAACCTAAGGAAGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS CAA 90 bp | TGGTGGGCGTTTAGGTGGAATTTTCACAGTGCCAGGGTTACCATTTaGCTGCTTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WWAFRWNFHSARVTI*LLNVTLGSSSLSLC Trigger: GCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAAACGCCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
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| CDS GCA 72 bp | ATCGATGCTGAGAACCACGTCCCCTATTCTGACATGTaGCTGAGATGCCTTGCCACCATCCTTCAGACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IDAENHVPYSDM*LRCLATILQTR Trigger: TCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGGTTCTCAGCATCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CCA 72 bp | GCATTGTTTGAAATTCTCCCAGTAGAAGGTGCTGCTTaGTTTGGACGCTGCCAGCTAGGTGACTTGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALFEILPVEGAA*FGRCQLGDLTL Trigger: CAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000197808.5 ENSMUST00000198381.5 ENSMUST00000200043.5 ENSMUST00000200650.5 |
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| CDS CAA 72 bp | CCACCATCCTTCAGACTAGAGATTGTCAGAGGCATGTaGAAATCCTTGCCACCTTGGAGCCGGAAACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPSFRLEIVRGM*KSLPPWSRKPQ Trigger: TTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAACATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CAA 90 bp | GGAACATGTCACCAGCCTCTATGGGGAATTCACATCCACGACATATaGTTCCAAAAAGGGCGTAGTAGTCTGTCTCACAGTAGGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GTCHQPLWGIHIHDI*FQKGRSSLSHSRAR Trigger: GCGAGCCCTACTGTGAGACAGACTACTACGCCCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CCA 72 bp | ACTGCAGGTTTACCAGTGTTCGGTGGAGATGAACACTaGTCAGCACTAAGATTGGCACTAACATGCAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TAGLPVFGGDEH*SALRLALTCSP Trigger: CGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTAAACCTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS GCA 72 bp | CAGGCCACACACACAAAACAGGACACATGCCAGGTCTaGTTCAAAGCATTGATGACTTCTCCAAGGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QATHTKQDTCQV*FKALMTSPRIF Trigger: GAAGATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTTTGTGTGTGTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CCA 72 bp | CGTGTGTTTTCTTCTGGACGGAAACCGGCTCACTCTTaGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVFSSGRKPAHS*LQLKLFVESYS Trigger: TGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGAAAACACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090134.12 |
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| CDS CCA 72 bp | GCGCTCCACAATGTGTTTTCTTGGTGGGCGTTTAGGTaGAATTTTCACAGTGCCAGGGTTATTTGTCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALHNVFSWWAFR*NFHSARVICHV Trigger: CACGTGACAAATAACCCTGGCACTGTGAAAATTCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090134.12 |
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| CDS CCA 72 bp | AAACTCCGTGTTGCGCTCCACAATGTGTTTTCTTGGTaGGCGTTTAGGTGGAATTTTCACAGTGCCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KLRVALHNVFSW*AFRWNFHSARV Trigger: AACCCTGGCACTGTGAAAATTCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090134.12 ENSMUST00000170361.9 |
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| CDS CAA 72 bp | ACGTGTGTTTTCTTCTGGACGGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTC | + |
|
Preference number: 6 (lower is better) Translates to: TCVFFWTETGSL*AAAEALCRVIF Trigger: GAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGAAAACACACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090134.12 |
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| CDS CAA 90 bp | TGGTGGGCTCTTGTAACTGCTTTGTACAGTACTTTTCTTCCCATTTaGCTGCTTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WWALVTALYSTFLPI*LLNVTLGSSSLSLC Trigger: GCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGGAAGAAAAGTACTGTACAAAGCAGTTACAAGAGCCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058626.9 |
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| CDS CAA 90 bp | TTATTTGTCACGTGTGTTTTCTTCTGGACGGAAACCGGCTCACTCTaGGCTGCAGCTGAAGCTCTTTGTAGAGTCATATTCAAGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LFVTCVFFWTETGSL*AAAEALCRVIFKEP Trigger: GGGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGAAAACACACGTGACAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090134.12 |
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| CDS CAA 90 bp | CACAATGTGTTTTCTTGGTGGGCGTTTAGGTGGAATTTTCCCATTTaGCTGCTTAATGTCACCCTGGGATCCTCTTCTCTGTCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HNVFSWWAFRWNFPI*LLNVTLGSSSLSLC Trigger: GCAGAGGGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGGAAAATTCCACCTAAACGCCCACCAAGAAAACACATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
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| CDS CAA 90 bp | ACAGTGCATCCAGAAGAGACTGGGAGTTTTCAGGGCCGAAGAGCTTaGCCTTCTTCGTATTGTCATTTTCAGATTCTGTCAGATGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TVHPEETGSFQGRRA*PSSYCHFQILSDAQ Trigger: CTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200043.5 |
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| CDS CCA 72 bp | ATATTCAAGGAGCCCGTACAAGCCTTAATCTTGTTCTaGGCTTCAAGATGCGTCATTCCCTGTGCACTGATC | + |
|
Preference number: 6 (lower is better) Translates to: IFKEPVQALILF*ASRCVIPCALI Trigger: GATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACGGGCTCCTTGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000029941.16 ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000196908.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CAA 72 bp | ATGACGCCGGTTGCTGAGAAGGCTCCTGGGTGCTATTaGCCTTCTTCGTATTGTCATTTTCAGATTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTPVAEKAPGCY*PSSYCHFQILS Trigger: TGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000198381.5 |
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| CDS CAA 72 bp | CACCAGCCTCTATGGGGAATTCACATCCACGACATATaGTTCCAAAAAGGGCGTAGTAGTCTGTCTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: HQPLWGIHIHDI*FQKGRSSLSHS Trigger: ACTGTGAGACAGACTACTACGCCCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS TCA 72 bp | GACATTAACTGCAGGTTTACCAGTGTTCGGTGGAGATaGACACTGGTCAGCACTAAGATTGGCACTAACATG | + |
|
Preference number: 6 (lower is better) Translates to: DINCRFTSVRWR*TLVSTKIGTNM Trigger: CATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTAAACCTGCAGTTAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029941.16 ENSMUST00000196908.5 |
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| CDS CCA 72 bp | ATCCCAGAGCTTCCAGGAACATGTCACCAGCCTCTATaGGGAATTCACATCCACGACATATTGTTCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: IPELPGTCHQPL*GIHIHDILFQK Trigger: TTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029941.16 ENSMUST00000195975.5 ENSMUST00000196220.5 ENSMUST00000198381.5 ENSMUST00000200043.5 |
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| CDS CAA 72 bp | TTTAGGTGGAATTTTCACAGTGCCAGGGTTACCATTTaGCTGCTTAATGTCACCCTGGGATCCTCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FRWNFHSARVTI*LLNVTLGSSSL Trigger: CAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170361.9 |
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| CDS CAA 72 bp | TTTTCTTGGTGGGCGTTTAGGTGGAATTTTCCCATTTaGCTGCTTAATGTCACCCTGGGATCCTCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSWWAFRWNFPI*LLNVTLGSSSL Trigger: CAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGGAAAATTCCACCTAAACGCCCACCAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168967.9 |
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| CDS CAA 72 bp | GAGTTTTCAGGGCCGAAGAGCTTTGCCTTCTTCGTATaGTCATTTTCAGATTCTGTCAGATGCTCAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EFSGPKSFAFFV*SFSDSVRCSVP Trigger: TGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGCTCTTCGGCCCTGAAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200043.5 |
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| CDS CAA 72 bp | CCAGAAGAGACTGGGAGTTTTCAGGGCCGAAGAGCTTaGCCTTCTTCGTATTGTCATTTTCAGATTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PEETGSFQGRRA*PSSYCHFQILS Trigger: TGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200043.5 |
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| CDS CAA 90 bp | CCTTCTACAGTTCTTGTAGACCTGCTTACATTTGCCTTCTTCGTATaGTCATTTTCAGATTCTGTCAGATGCTCAGTCCCAGTGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTVLVDLLTFAFFV*SFSDSVRCSVPVIW Trigger: CCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAGGTCTACAAGAACTGTAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196220.5 ENSMUST00000197808.5 |
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| CDS CAA 72 bp | GATAAAACTCCGTGTTGCGCTCCACAATGTGTTTTCTaGGTGGGCTCTTGTAACTGCTTTGTACAGTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: DKTPCCAPQCVF*VGSCNCFVQYF Trigger: AAAGTACTGTACAAAGCAGTTACAAGAGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058626.9 |
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| CDS GCA 72 bp | CACTGTACATTAAGAGCACGTGCTGAAACTTCATGGTaGCAGTCACGTAATTTTGTGTATTTGGGACTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HCTLRARAETSW*QSRNFVYLGLK Trigger: CTTTAGTCCCAAATACACAAAATTACGTGACTGGCACCATGAAGTTTCAGCACGTGCTCTTAATGTACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058626.9 ENSMUST00000090134.12 ENSMUST00000168967.9 ENSMUST00000170361.9 ENSMUST00000196908.5 |
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| CDS GCA 72 bp | AGTTCTTGTAGACCTGCTTACACTAGAGTAAGTGGCTaGTTCCTTAGAAACTATGGCTACTTGACTATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCRPAYTRVSG*FLRNYGYLTMN Trigger: GTTCATAGTCAAGTAGCCATAGTTTCTAAGGAAGCAGCCACTTACTCTAGTGTAAGCAGGTCTACAAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195975.5 |
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| CDS CAA 72 bp | GTTCTTGTAGACCTGCTTACATTTGCCTTCTTCGTATaGTCATTTTCAGATTCTGTCAGATGCTCAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLVDLLTFAFFV*SFSDSVRCSVP Trigger: TGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAGGTCTACAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196220.5 ENSMUST00000197808.5 |
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| CDS GCA 72 bp | AGCACCTTCTACAGTTCTTGTAGACCTGCTTACATTTaGCTTCTTCGTATTGTCATTTTCAGATTCTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: STFYSSCRPAYI*LLRIVIFRFCQ Trigger: CTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196220.5 ENSMUST00000197808.5 |
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| CDS GCA 72 bp | AGCACCTTCTACAGTTCTTGTAGACCTGCTTACATTTaGCTTCTTCGTATTGTCATTTTCAGATTCTGTCAN | + |
|
Preference number: 6 (lower is better) Translates to: STFYSSCRPAYI*LLRIVIFRFCX Trigger: NTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200650.5 |
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