Pregenerated sensors for PDLIM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031636Ensembl transcript IDs: ENSMUST00000034053.7, ENSMUST00000210422.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTGTTTaGGGGTGTGCGCATGTGTGCGTGAGTGTTCTTGTCTGCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SHFSFLKSSTPSAGV*GCAHVCVSVLVCKG Trigger: TCCTTTGCAGACAAGAACACTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR CCA 90 bp | CGTTCTCCAGTGGTACAGCTGTTCGCATGTAGAATAGAGCAATCCTaGAAGTGTCTTCCTGACATGCACTTTAGGAATGACAGACACAGA | + |
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Preference number: 1 (lower is better) Translates to: RSPVVQLFACRIEQS*KCLPDMHFRNDRHR Trigger: TCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAGACACTTCCAGGATTGCTCTATTCTACATGCGAACAGCTGTACCACTGGAGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| 3UTR GCA 90 bp | ATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACATTATTaGTTTAAATGTCTATTGCTGTCCCCAAAGATAAGGAATTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: IRWLGNRGSMVWKHY*FKCLLLSPKIRNCN Trigger: ATTGCAATTCCTTATCTTTGGGGACAGCAATAGACATTTAAAGCAATAATGTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR CAA 90 bp | AGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCACTTCTCTTTCTaGAAGTCCTCCACACCATCAGCCGGTGTTTGCGGGTGTGCGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLGFRVGGDCSHFSF*KSSTPSAGVCGCAH Trigger: ATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCCCACTCTAAAGCCGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR CAA 90 bp | TTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTGTTaGCGGGTGTGCGCATGTGTGCGTGAGTGTTCTTGTCTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FALLFLEVLHTISRC*RVCACVRECSCLQR Trigger: CCTTTGCAGACAAGAACACTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCCCATCAGCCGGTGTTTaGGGGTGTGCGCATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QQDKCLKASALEWEVTVRPSAGV*GCAHVC Trigger: GCACACATGCGCACACCCGCAAACACCGGCTGATGG...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGCCATCAGCCGGTGTTTaGGGGTGTGCGCATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SLSTQQDKCLKASALEWEPSAGV*GCAHVC Trigger: GCACACATGCGCACACCCGCAAACACCGGCTGATGG...CTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGCCTCGGCTTTAGAGTaGGAGGTGACTGTTCGCACT | + |
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Preference number: 2 (lower is better) Translates to: PQISRYLHIRWLGNRGSMASALE*EVTVRT Trigger: AGTGCGAACAGTCACCTCCCACTCTAAAGCCGAGGC...CATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGCGCACTTCTCTTTCTTaGAGTCCTCCACACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SLSTQQDKCLKASALEWERTSLS*SPPHHQ Trigger: CTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCG...CTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTAGCCTCGGCTTTAGAGTaGGAGGTGACTGTTCGCACT | + |
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Preference number: 2 (lower is better) Translates to: QISRYLHIRWLGNRGSMVASALE*EVTVRT Trigger: AGTGCGAACAGTCACCTCCCACTCTAAAGCCGAGGC...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGCGCACTTCTCTTTCTTaGAGTCCTCCACACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: CFSLSTQQDKCLKASALERTSLS*SPPHHQ Trigger: CTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCG...CTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACTCAGCAGGCAGGCCTTaGCCTCCCCTCCCCGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PGIYISDGWVTEGAWYGNSAGRP*PPLPVF Trigger: AAACACGGGGAGGGGAGGCAAAGGCCTGCCTGCTGA...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR TCA 72 bp | TTAGAGTGGGAGGTGACTGTTCGCACTTCTCTTTCTTaGAGTCCTCCACACCATCAGCCGGTGTTTGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: LEWEVTVRTSLS*SPPHHQPVFAG Trigger: ACCCGCAAACACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCCCACTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAAACCATCAGCCGGTGTTaGCGGGTGTGCGCATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKTISRC*RVCACV Trigger: CACACATGCGCACACCCGCAAACACCGGCTGATGGT...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGTCGCACTTCTCTTTCTaGAAGTCCTCCACACCATCA | + |
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Preference number: 3 (lower is better) Translates to: FSLSTQQDKCLKASALEWSHFSF*KSSTPS Trigger: TGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGA...CCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR CCA 72 bp | CAGACACAGACACCTGCGGAGTTTGTTAAGAGTGTTTaGCATTACTTACTACAATTACTAAAAGCAACTTGG | + |
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Preference number: 3 (lower is better) Translates to: QTQTPAEFVKSV*HYLLQLLKATW Trigger: CCAAGTTGCTTTTAGTAATTGTAGTAAGTAATGCCAAACACTCTTAACAAACTCCGCAGGTGTCTGTGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | GAAGTCCTCCACACCATCAGCCGGTGTTTGCGGGTGTGCGCATGTGTGCGTGAGCCTCTGGGGGCCTCGTaGGGGCTCTCGCGTGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: EVLHTISRCLRVCACVREPLGAS*GLSRAS Trigger: AGACGCACGCGAGAGCCCGCACGAGGCCCCCAGAGG...CTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCCAGAGCGGCATCCTCTaGGCACTGCCAGCCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: VGGDCSHFSFLKSSTPSAQSGIL*ALPAPP Trigger: CGGTGGGGCTGGCAGTGCCCAGAGGATGCCGCTCTG...GGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTCCACACCATCAGCCGGTGTTTGCGGGTGTGCGCATGTGTGCGTGAGGGGGCACTGAAGCTGTaGGTTCACTCATGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: EVLHTISRCLRVCACVREGALKL*VHSWRM Trigger: CATCCTCCATGAGTGAACCCACAGCTTCAGTGCCCC...CTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCCTCCACACCATCAGCCGGTGTTTGCGGGTGTGCGCATGTGTGCGTGAGACTTATCCCGGGCCTTaGCGACAGCACCTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: EVLHTISRCLRVCACVRETYPGP*RQHLQY Trigger: GTATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGT...CTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | GAAGTCCTCCACACCATCAGCCGGTGTTTGCGGGTGTGCGCATGTGTGCGTGAGATCAATGTTTGCTGCTaGTACGAAAGGCTGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EVLHTISRCLRVCACVREINVCC*YERLGP Trigger: AGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGAT...CTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACCCTCTGGGGGCCTCGTaGGGGCTCTCGCGTGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNPLGAS*GLSRAS Trigger: AGACGCACGCGAGAGCCCGCACGAGGCCCCCAGAGG...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCCAGAGCGGCATCCTCTaGGCACTGCCAGCCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: QQDKCLKASALEWEVTVRQSGIL*ALPAPP Trigger: CGGTGGGGCTGGCAGTGCCCAGAGGATGCCGCTCTG...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | CAATCCTGGAAGTGTCTTCCTGACATGCACTTTAGGAATGACAGACACAGACACGGTGTCGTAGCCCTCTaGGGGCCTCGTGCGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QSWKCLPDMHFRNDRHRHGVVAL*GPRAGS Trigger: AGAGCCCGCACGAGGCCCCCAGAGGGCTACGACACC...GTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAGACACTTCCAGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACCTGAAGGAGCCCGACTaGCGAGGAGCGGCTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNLKEPD*RGAAGS Trigger: TGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAG...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| 3UTR CAA 72 bp | CTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTGTTaGCGGGTGTGCGCATGTGTGCGTGAGTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFLEVLHTISRC*RVCACVRECSC Trigger: ACAAGAACACTCACGCACACATGCGCACACCCGCAAACACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCACACAGGTTGGCAGCTaGTGCTTTGCTTCCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VGGDCSHFSFLKSSTPSATQVGS*CFASWS Trigger: ACTCCAGGAAGCAAAGCAGCAGCTGCCAACCTGTGT...GGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | ATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGGCATCCTCTGGGCACTaGCAGCCCCACCGTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: ISRYLHIRWLGNRGSMVWASSGH*QPHRGL Trigger: AAGTCCACGGTGGGGCTGGCAGTGCCCAGAGGATGC...CCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTGACATGCACTTTAGGAATGACAGACACAGACACCTGCGGAGTTTGTTAACAAAGCACTCGGGGTaGCGGTACTTATCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPDMHFRNDRHRHLRSLLTKHSG*RYLSRA Trigger: GGCCCGGGATAAGTACCGGCACCCCGAGTGCTTTGT...TAACAAACTCCGCAGGTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CCA 90 bp | GGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTTGCTGCTTTGCTTCCTaGAGTGATCCTGGTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: GGDCSHFSFLKSSTPSAGCCFAS*SDPGDD Trigger: GTCATCACCAGGATCACTCCAGGAAGCAAAGCAGCA...ACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | AAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGTGTCGTAGCCCTCTaGGGGCCTCGTGCGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KYPGIYISDGWVTEGAWYGVVAL*GPRAGS Trigger: AGAGCCCGCACGAGGCCCCCAGAGGGCTACGACACC...ATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR TCA 90 bp | AAAACAAGTAGACTCCCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTGATCCTGCAGCACCCTaGAGGAGCCCGACTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KTSRLPQISRYLHIRWLGDPAAP*RSPTGE Trigger: CTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATC...ACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGGGAGTCTACTTGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTAGCATCCTCTGGGCACTaGCAGCCCCACCGTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVASSGH*QPHRGL Trigger: AAGTCCACGGTGGGGCTGGCAGTGCCCAGAGGATGC...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAAACAAAGCACTCGGGGTaGCGGTACTTATCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKTKHSG*RYLSRA Trigger: GGCCCGGGATAAGTACCGGCACCCCGAGTGCTTTGT...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCCTCCAGGACACAGGTTaGCAGCTGCTGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QQDKCLKASALEWEVTVRLQDTG*QLLLCF Trigger: GAAGCAAAGCAGCAGCTGCCAACCTGTGTCCTGGAG...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCACTTATCCCGGGCCTTaGCGACAGCACCTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: QQDKCLKASALEWEVTVRTYPGP*RQHLQY Trigger: GTATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGT...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCCAGGTTGGCAGCTGCTaGTTTGCTTCCTGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LPQISRYLHIRWLGNRGSQVGSC*FASWSD Trigger: ATCACTCCAGGAAGCAAAGCAGCAGCTGCCAACCTG...GCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTAGTGCGGGCTCTCGCGTaGGTCTCACAATACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVVRALA*VSQYSS Trigger: GGAGCTGTATTGTGAGACGCACGCGAGAGCCCGCAC...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | CAATCCTGGAAGTGTCTTCCTGACATGCACTTTAGGAATGACAGACACAGACACCTCCAGGACACAGGTTaGCAGCTGCTGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSWKCLPDMHFRNDRHRHLQDTG*QLLLCF Trigger: GAAGCAAAGCAGCAGCTGCCAACCTGTGTCCTGGAG...GTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAGACACTTCCAGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACCAGGTTGGCAGCTGCTaGTTTGCTTCCTGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNQVGSC*FASWSD Trigger: ATCACTCCAGGAAGCAAAGCAGCAGCTGCCAACCTG...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCGTCATCAATGTTTGCTaGTGCTACGAAAGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPQISRYLHIRWLGNRGSVINVC*CYERLG Trigger: GCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGAC...GCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAAGGTTGTCATGGAGCATaGGGTACACGTCCGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKGCHGA*GTRPTE Trigger: CTCAGTCGGACGTGTACCGCATGCTCCATGACAACC...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | AAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGTGCGGGCTCTCGCGTaGGTCTCACAATACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KYPGIYISDGWVTEGAWYVRALA*VSQYSS Trigger: GGAGCTGTATTGTGAGACGCACGCGAGAGCCCGCAC...ATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | TGTTTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGGCTGCTACGAAAGGCTaGGCCCTTCTGTTGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFSLSTQQDKCLKASALEAATKG*ALLLCA Trigger: CGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGC...CTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| 3UTR CAA 72 bp | GATAAGGAATTGCAATCCATAGATAATACTTGTCTTTaGTCAGCAGGCAGGCCTTTGCCTCCCCTCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKELQSIDNTCL*SAGRPLPPLPV Trigger: CACGGGGAGGGGAGGCAAAGGCCTGCCTGCTGACAAAAGACAAGTATTATCTATGGATTGCAATTCCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACGTGATGACCAAAGGCTaGTTGAAGTCTATGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNVMTKG*LKSMPP Trigger: TGGGGGCATAGACTTCAATCAGCCTTTGGTCATCAC...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATAGAGCCCAATTGGTaGGTTATAGGAAGCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPQISRYLHIRWLGNRGSIEPNW*VIGSAH Trigger: GTGAGCGCTTCCTATAACTCACCAATTGGGCTCTAT...GCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGTGGGCCCTTCTGTTGTaGGCGGTACCAATGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSTQQDKCLKASALEWWALLL*AVPMGL Trigger: CAAACCCATTGGTACCGCGCACAACAGAAGGGCCCA...CCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGACATGCACTTTAGGAATGACAGACACAGACACCTGCGGAGTTTGTTAGCTGTGGGTTCATTTTaGAGTGATCCGGGGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPDMHFRNDRHRHLRSLLAVGSF*SDPGMR Trigger: TCTCATCCCCGGATCACTGCAAAATGAACCCACAGC...TAACAAACTCCGCAGGTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR GCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTAGGTTGTCATGGAGCATaGGGTACACGTCCGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVGCHGA*GTRPTE Trigger: CTCAGTCGGACGTGTACCGCATGCTCCATGACAACC...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACTGCTGCTTTGCTTCCTaGAGTGATCCTGGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNCCFAS*SDPGDD Trigger: GTCATCACCAGGATCACTCCAGGAAGCAAAGCAGCA...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR CCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATCATCCCGGTTGTCATaGAGCATGCGGTACACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVSSRLS*SMRYTS Trigger: GGACGTGTACCGCATGCTCCATGACAACCGGGATGA...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR CCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATCTCCCCTAGAGCTGTaGCAACCTGACCCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVSPLEL*QPDPEV Trigger: CACTTCAGGGTCAGGTTGCCACAGCTCTAGGGGAGA...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACCGGTACCAATGGGTTTaGATTCCTGTGGTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGIYISDGWVTEGAWYGNRYQWV*IPVVQL Trigger: AAGCTGAACCACAGGAATTCAAACCCATTGGTACCG...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGCCATCTTCAGACACCTaGGGGGACCATAAGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSTQQDKCLKASALEWPSSDT*GDHKRV Trigger: AACTCGCTTATGGTCCCCGCAGGTGTCTGAAGATGG...CCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR GCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTACCATCTTCAGACACCTaGGGGGACCATAAGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVPSSDT*GDHKRV Trigger: AACTCGCTTATGGTCCCCGCAGGTGTCTGAAGATGG...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CCA 90 bp | AAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATTCATCCCGGTTGTCATaGAGCATGCGGTACACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYPGIYISDGWVTEGAWYSSRLS*SMRYTS Trigger: GGACGTGTACCGCATGCTCCATGACAACCGGGATGA...ATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR TCA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTAGTGATGACCAAAGGCTaGTTGAAGTCTATGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QISRYLHIRWLGNRGSMVVMTKG*LKSMPP Trigger: TGGGGGCATAGACTTCAATCAGCCTTTGGTCATCAC...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGTTCGGCCTGGAATTATaGAAGGTTTGGGCCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSTQQDKCLKASALEWEFGLEL*KVWAEY Trigger: ATATTCGGCCCAAACCTTTCATAATTCCAGGCCGAA...CTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGGCCACTGGTTCGGCCTaGAATTATGAAAGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSLSTQQDKCLKASALEATGSA*NYERFG Trigger: CCCAAACCTTTCATAATTCCAGGCCGAACCAGTGGC...CTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGTTTAATCCTGTCCTGTaGATCAGCATGAGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQISRYLHIRWLGNRGSMFNPVL*ISMSHR Trigger: TCTATGACTCATGCTGATGCACAGGACAGGATTAAA...CATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACATAATATTGTCATCTaGGTACAACTGCATAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKHNIVI*VQLHRR Trigger: ACGCCTATGCAGTTGTACTCAGATGACAATATTATG...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAATTTAATCCTGTCCTGTaGATCAGCATGAGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKFNPVL*ISMSHR Trigger: TCTATGACTCATGCTGATGCACAGGACAGGATTAAA...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR GCA 90 bp | AAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATTTTGTCATCAATGTTTaGTGCTGCTACGAAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYPGIYISDGWVTEGAWYFVINV*CCYERL Trigger: CAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAA...ATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS TCA 90 bp | CCGGACGGTCATCAGGCCCGTCATTCACCAGATCCTGCAGCACCCTaGAGGAGCCCGACTGGCGAGGAGCGGCTGGGTCATCCCGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PDGHQARHSPDPAAP*RSPTGEERLGHPGC Trigger: ACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAATGACGGGCCTGATGACCGTCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 90 bp | CGAGTTCCAGCCGGACGGTCATCAGGCCCGTCATTCACCAGATCCTaGAGCACCCTGAAGGAGCCCGACTGGCGAGGAGCGGCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVPAGRSSGPSFTRS*STLKEPDWRGAAGS Trigger: TGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAATGACGGGCCTGATGACCGTCCGGCTGGAACTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CCA 90 bp | GGCCCGTCATTCACCAGATCCTGCAGCACCCTGAAGGAGCCCGACTaGCGAGGAGCGGCTGGGTCATCCCGGTTGTCATGGAGCATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSFTRSCSTLKEPD*RGAAGSSRLSWSMR Trigger: CCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAATGACGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 90 bp | CCGACTGGCGAGGAGCGGCTGGGTCATCCCGGTTGTCATGGAGCATaGGGTACACGTCCGACTGAGGGGGCACTGAAGCTGTGGGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PTGEERLGHPGCHGA*GTRPTEGALKLWVH Trigger: GTGAACCCACAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS CCA 90 bp | CAGATCCTGCAGCACCCTGAAGGAGCCCGACTGGCGAGGAGCGGCTaGGTCATCCCGGTTGTCATGGAGCATGCGGTACACGTCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QILQHPEGARLARSG*VIPVVMEHAVHVRL Trigger: CAGTCGGACGTGTACCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 90 bp | CCGACTGGCGAGGAGCGGCTGGGTCATCCCGGTTGTCATGGAGCATaGGGTACACGTCCGACTGAGGGGGCACTGAAGCTGTGGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTGEERLGHPGCHGA*GTRPTEGALKLWVH Trigger: ATGAACCCACAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS CCA 90 bp | CATGGAGCATGCGGTACACGTCCGACTGAGGGGGCACTGAAGCTGTaGGTTCACTCATGGAGGATGTCTCCCCTAGAGCTGTGGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: HGACGTRPTEGALKL*VHSWRMSPLELWQP Trigger: AGGTTGCCACAGCTCTAGGGGAGACATCCTCCATGAGTGAACCCACAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCATGCTCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS TCA 90 bp | GCTGCTGCTTTGCTTCCTGGAGTGATCCTGGTGATGACCAAAGGCTaGTTGAAGTCTATGCCCCCAGAGAGTCTGAAGCCCCAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAALLPGVILVMTKG*LKSMPPESLKPQGA Trigger: TGCGCCCTGGGGCTTCAGACTCTCTGGGGGCATAGACTTCAATCAGCCTTTGGTCATCACCAGGATCACTCCAGGAAGCAAAGCAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | GGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTTTGGCAGCTGCTGCTTaGCTTCCTGGAGTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGDCSHFSFLKSSTPSAGLAAAA*LPGVIL Trigger: CAGGATCACTCCAGGAAGCAAAGCAGCAGCTGCCAA...ACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | GGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCGGTATACCACTCCCACACTaGTCACAGAGCGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGDCSHFSFLKSSTPSAGIPLPH*SQSGIL Trigger: GAGGATGCCGCTCTGTGACAAGTGTGGGAGTGGTAT...ACCGGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 90 bp | ATAGGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTTGCTGCTaGTACGAAAGGCTGGGCCCTTCTGTTGTGCGCGGTACCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: IGSAHYLSFVINVCC*YERLGPSVVRGTNG Trigger: CCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCTTCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CAA 90 bp | ATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGGGCTGGGCCCTTCTGTaGTGCGCGGTACCAATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISRYLHIRWLGNRGSMVWGWALL*CAVPMG Trigger: ACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCC...CCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CAA 90 bp | TCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGCTGGGTCATCCCGGTaGTCATGGAGCATGCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSTQQDKCLKASALEWEAGSSR*SWSMRY Trigger: GTACCGCATGCTCCATGACAACCGGGATGACCCAGC...CTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | GTGGGAGGTGACTGTTCGCACTTCTCTTTCTTGAAGTCCTCCACACCATCAGCCTACTTATCCCGGGCCTaGACGACAGCACCTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: VGGDCSHFSFLKSSTPSAYLSRA*TTAPTI Trigger: TATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGTA...GGCTGATGGTGTGGAGGACTTCAAGAAAGAGAAGTGCGAACAGTCACCTCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 90 bp | TCATCAATGTTTGCTGCTGCTACGAAAGGCTGGGCCCTTCTGTTGTaGGCGGTACCAATGGGTTTGAATTCCTGTGGTTCAGCTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSMFAAATKGWALLL*AVPMGLNSCGSASK Trigger: CTTAGAAGCTGAACCACAGGAATTCAAACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS GCA 90 bp | GTTATAGGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTTGCTaGTGCTACGAAAGGCTGGGCCCTTCTGTTGTGCGCGGTACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VIGSAHYLSFVINVC*CYERLGPSVVRGTN Trigger: ATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCTTCCTATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGATACCACTCCCACACTaGTCACAGAGCGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSTQQDKCLKASALEWEIPLPH*SQSGIL Trigger: GAGGATGCCGCTCTGTGACAAGTGTGGGAGTGGTAT...CTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS TCA 90 bp | CAACACCGGAAGGAGTGCTGCAGCCACTGGTTCGGCCTGGAATTATaGAAGGTTTGGGCCGAATATTGTGCTTGTGTTCAAAGTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QHRKECCSHWFGLEL*KVWAEYCACVQSSS Trigger: TGAACTACTTTGAACACAAGCACAATATTCGGCCCAAACCTTTCATAATTCCAGGCCGAACCAGTGGCTGCAGCACTCCTTCCGGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
||
| CDS CCA 90 bp | ACTACCTGTCTTTTGTCATCAATGTTTGCTGCTGCTACGAAAGGCTaGGCCCTTCTGTTGTGCGCGGTACCAATGGGTTTGAATTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTCLLSSMFAAATKG*ALLLCAVPMGLNSC Trigger: ACAGGAATTCAAACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR CAA 90 bp | CTGTTCGCATGTAGAATAGAGCAATCCTGGAAGTGTCTTCCTGACATGCACTTTTTGGCAGCTGCTGCTTaGCTTCCTGGAGTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFACRIEQSWKCLPDMHFLAAAA*LPGVIL Trigger: CAGGATCACTCCAGGAAGCAAAGCAGCAGCTGCCAA...AAAGTGCATGTCAGGAAGACACTTCCAGGATTGCTCTATTCTACATGCGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGGCTGGGTCATCCCGGTaGTCATGGAGCATGCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CFSLSTQQDKCLKASALEAGSSR*SWSMRY Trigger: GTACCGCATGCTCCATGACAACCGGGATGACCCAGC...CTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGACATGCACTTTAGGAATGACAGACACAGACACCTGCGGAGTTTGTTACCTTTCTGCTTGAGGTaGAGGTTACAGTCGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPDMHFRNDRHRHLRSLLPFCLR*RLQSAH Trigger: GTGTGCCGACTGTAACCTCAACCTCAAGCAGAAAGG...TAACAAACTCCGCAGGTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
||
| CDS GCA 90 bp | AATCTTGAGACACAACTGGTAGGACGCTGCTTTAATCCTGTCCTGTaGATCAGCATGAGTCATAGACTCCGTACCAAAGCCATCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLETQLVGRCFNPVL*ISMSHRLRTKAINS Trigger: GCTATTGATGGCTTTGGTACGGAGTCTATGACTCATGCTGATGCACAGGACAGGATTAAAGCAGCGTCCTACCAGTTGTGTCTCAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
||
| CDS-3UTR CAA 90 bp | CAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTACCTTTCTGCTTGAGGTaGAGGTTACAGTCGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: QISRYLHIRWLGNRGSMVPFCLR*RLQSAH Trigger: GTGTGCCGACTGTAACCTCAACCTCAAGCAGAAAGG...TACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTGACATGCACTTTAGGAATGACAGACACAGACACCTGCGGAGTTTGTTAGGTTCAGCTTCTAAGTaGATTTTGAAGGGGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LPDMHFRNDRHRHLRSLLGSASK*ILKGCA Trigger: AGCACACCCCTTCAAAATCAACTTAGAAGCTGAACC...TAACAAACTCCGCAGGTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CAA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCTTTTGTCATCAATGTTaGCTGCTGCTACGAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: QQDKCLKASALEWEVTVRFCHQC*LLLRKA Trigger: AGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAA...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CAA 90 bp | CCCCAAATATCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGTTGAATAGAGCCCAATaGGTGAGTTATAGGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PQISRYLHIRWLGNRGSMLNRAQ*VSYRKR Trigger: GCGCTTCCTATAACTCACCAATTGGGCTCTATTCAA...CATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGATATTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS-3UTR CAA 90 bp | CAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTGGGAGGTGACTGTTCGCGGAATTATGAAAGGTTaGGGCCGAATATTGTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QQDKCLKASALEWEVTVRGIMKG*GRILCL Trigger: CAAGCACAATATTCGGCCCAAACCTTTCATAATTCC...GCGAACAGTCACCTCCCACTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS TCA 90 bp | TCCATAATATTGTCATCTGAGTACAACTGCATAGGCGTGTTAAACTaGGCGTGTACGATCTTCACGCCCGGAAGTTCCATTTCCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SIILSSEYNCIGVLN*ACTIFTPGSSISKG Trigger: TCCTTTGGAAATGGAACTTCCGGGCGTGAAGATCGTACACGCTCAGTTTAACACGCCTATGCAGTTGTACTCAGATGACAATATTATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS TCA 90 bp | AGCTGTGGCAACCTGACCCTGAAGTGTTTCCATAATATTGTCATCTaGGTACAACTGCATAGGCGTGTTAAACTGAGCGTGTACGATCTT | + |
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Preference number: 5 (lower is better) Translates to: SCGNLTLKCFHNIVI*VQLHRRVKLSVYDL Trigger: AAGATCGTACACGCTCAGTTTAACACGCCTATGCAGTTGTACTCAGATGACAATATTATGGAAACACTTCAGGGTCAGGTTGCCACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | CCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAACGCTTCTAAGTTGATTTaGAAGGGGTGTGCTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PGIYISDGWVTEGAWYGNASKLI*KGCAFP Trigger: TGGAAAAGCACACCCCTTCAAAATCAACTTAGAAGC...GTTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | TCCAGGTATTTACATATCAGATGGCTGGGTAACAGAGGGAGCATGGTATGGAAAGGTTCAGCTTCTAAGTaGATTTTGAAGGGGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SRYLHIRWLGNRGSMVWKGSASK*ILKGCA Trigger: AGCACACCCCTTCAAAATCAACTTAGAAGCTGAACC...TTTCCATACCATGCTCCCTCTGTTACCCAGCCATCTGATATGTAAATACCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS-3UTR CAA 90 bp | TGTTTTTCCCTCTCTACACAGCAAGATAAATGTCTAAAAGCCTCGGCTTTAGAGTACTTATCCCGGGCCTaGACGACAGCACCTACAATA | + |
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Preference number: 5 (lower is better) Translates to: CFSLSTQQDKCLKASALEYLSRA*TTAPTI Trigger: TATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGTA...CTCTAAAGCCGAGGCTTTTAGACATTTATCTTGCTGTGTAGAGAGGGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 72 bp | GCCGGACGGTCATCAGGCCCGTCATTCACCAGATCCTaGAGCACCCTGAAGGAGCCCGACTGGCGAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: AGRSSGPSFTRS*STLKEPDWRGA Trigger: CGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAATGACGGGCCTGATGACCGTCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CCA 72 bp | CAGCACCCTGAAGGAGCCCGACTGGCGAGGAGCGGCTaGGTCATCCCGGTTGTCATGGAGCATGCGGTACAC | + |
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Preference number: 6 (lower is better) Translates to: QHPEGARLARSG*VIPVVMEHAVH Trigger: GTGTACCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS TCA 72 bp | CATCAGGCCCGTCATTCACCAGATCCTGCAGCACCCTaGAGGAGCCCGACTGGCGAGGAGCGGCTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HQARHSPDPAAP*RSPTGEERLGH Trigger: ATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAATGACGGGCCTGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 72 bp | GAGGAGCGGCTGGGTCATCCCGGTTGTCATGGAGCATaGGGTACACGTCCGACTGAGGGGGCACTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EERLGHPGCHGA*GTRPTEGALKL Trigger: CAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCATGCTCCATGACAACCGGGATGACCCAGCCGCTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CCA 72 bp | TTCACCAGATCCTGCAGCACCCTGAAGGAGCCCGACTaGCGAGGAGCGGCTGGGTCATCCCGGTTGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: FTRSCSTLKEPD*RGAAGSSRLSW Trigger: CCATGACAACCGGGATGACCCAGCCGCTCCTCGCCAGTCGGGCTCCTTCAGGGTGCTGCAGGATCTGGTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS TCA 72 bp | ATGGAGCATGCGGTACACGTCCGACTGAGGGGGCACTaGAGCTGTGGGTTCACTCATGGAGGATGTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MEHAVHVRLRGH*SCGFTHGGCLP Trigger: GGGGAGACATCCTCCATGAGTGAACCCACAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCATGCTCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS CCA 72 bp | TGCGGTACACGTCCGACTGAGGGGGCACTGAAGCTGTaGGTTCACTCATGGAGGATGTCTCCCCTAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CGTRPTEGALKL*VHSWRMSPLEL Trigger: CAGCTCTAGGGGAGACATCCTCCATGAGTGAACCCACAGCTTCAGTGCCCCCTCAGTCGGACGTGTACCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS TCA 72 bp | CAAAGCACTCGGGGTGCCGGTACTTATCCCGGGCCTTaGCGACAGCACCTACAATACCACTCCCACACTTGT | + |
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Preference number: 6 (lower is better) Translates to: QSTRGAGTYPGP*RQHLQYHSHTC Trigger: ACAAGTGTGGGAGTGGTATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGTACCGGCACCCCGAGTGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CAA 72 bp | ACAAAGCACTCGGGGTGCCGGTACTTATCCCGGGCCTaGACGACAGCACCTACAATACCACTCCCACACTTG | + |
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Preference number: 6 (lower is better) Translates to: TKHSGCRYLSRA*TTAPTIPLPHL Trigger: CAAGTGTGGGAGTGGTATTGTAGGTGCTGTCGTCAAGGCCCGGGATAAGTACCGGCACCCCGAGTGCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS TCA 72 bp | TTGCTTCCTGGAGTGATCCTGGTGATGACCAAAGGCTaGTTGAAGTCTATGCCCCCAGAGAGTCTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLPGVILVMTKG*LKSMPPESLKP Trigger: GGGCTTCAGACTCTCTGGGGGCATAGACTTCAATCAGCCTTTGGTCATCACCAGGATCACTCCAGGAAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS GCA 72 bp | GCTCACTACCTGTCTTTTGTCATCAATGTTTGCTGCTaGTACGAAAGGCTGGGCCCTTCTGTTGTGCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: AHYLSFVINVCC*YERLGPSVVRG Trigger: ACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS GCA 72 bp | AGCGCTCACTACCTGTCTTTTGTCATCAATGTTTGCTaGTGCTACGAAAGGCTGGGCCCTTCTGTTGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SAHYLSFVINVC*CYERLGPSVVR Trigger: GCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS CAA 72 bp | ATGTTTGCTGCTGCTACGAAAGGCTGGGCCCTTCTGTaGTGCGCGGTACCAATGGGTTTGAATTCCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: MFAAATKGWALL*CAVPMGLNSCG Trigger: ACCACAGGAATTCAAACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS CAA 90 bp | GTACCAAAGCCATCAATAGCTAGGATGACATCTCCAGGACACAGGTaGGCAGCTGCTGCTTTGCTTCCTGGAGTGATCCTGGTGATGACC | + |
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Preference number: 6 (lower is better) Translates to: VPKPSIARMTSPGHR*AAAALLPGVILVMT Trigger: GGTCATCACCAGGATCACTCCAGGAAGCAAAGCAGCAGCTGCCAACCTGTGTCCTGGAGATGTCATCCTAGCTATTGATGGCTTTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CAA 90 bp | GTGAGTTATAGGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTaGCTGCTGCTACGAAAGGCTGGGCCCTTCTGTTGTGCGCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: VSYRKRSLPVFCHQC*LLLRKAGPFCCARY Trigger: GTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCTTCCTATAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS GCA 72 bp | GGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTTaGTGCTGCTACGAAAGGCTGGGCCCTTCTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSAHYLSFVINV*CCYERLGPSVV Trigger: CACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS CCA 72 bp | CTTTTGTCATCAATGTTTGCTGCTGCTACGAAAGGCTaGGCCCTTCTGTTGTGCGCGGTACCAATGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLSSMFAAATKG*ALLLCAVPMGL Trigger: CAAACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS CCA 72 bp | AACACCGGAAGGAGTGCTGCAGCCACTGGTTCGGCCTaGAATTATGAAAGGTTTGGGCCGAATATTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NTGRSAAATGSA*NYERFGPNIVL Trigger: AAGCACAATATTCGGCCCAAACCTTTCATAATTCCAGGCCGAACCAGTGGCTGCAGCACTCCTTCCGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS CAA 90 bp | TTGTCATCAATGTTTGCTGCTGCTACGAAAGGCTGGGCCCTTCTGTaGTGCGCGGTACCAATGGGTTTGAATTCCTGTGGTTCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSMFAAATKGWALL*CAVPMGLNSCGSAS Trigger: AGAAGCTGAACCACAGGAATTCAAACCCATTGGTACCGCGCACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS GCA 72 bp | ACACAACTGGTAGGACGCTGCTTTAATCCTGTCCTGTaGATCAGCATGAGTCATAGACTCCGTACCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TQLVGRCFNPVL*ISMSHRLRTKA Trigger: GGCTTTGGTACGGAGTCTATGACTCATGCTGATGCACAGGACAGGATTAAAGCAGCGTCCTACCAGTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS CAA 72 bp | AGGAAGCGCTCACTACCTGTCTTTTGTCATCAATGTTaGCTGCTGCTACGAAAGGCTGGGCCCTTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RKRSLPVFCHQC*LLLRKAGPFCC Trigger: ACAACAGAAGGGCCCAGCCTTTCGTAGCAGCAGCAAACATTGATGACAAAAGACAGGTAGTGAGCGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS TCA 72 bp | AAGGAGTGCTGCAGCCACTGGTTCGGCCTGGAATTATaGAAGGTTTGGGCCGAATATTGTGCTTGTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: KECCSHWFGLEL*KVWAEYCACVQ Trigger: TTGAACACAAGCACAATATTCGGCCCAAACCTTTCATAATTCCAGGCCGAACCAGTGGCTGCAGCACTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS GCA 72 bp | TGCCCTGTCAATCTTGAGACACAACTGGTAGGACGCTaGTTTAATCCTGTCCTGTGCATCAGCATGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CPVNLETQLVGR*FNPVLCISMSH Trigger: ATGACTCATGCTGATGCACAGGACAGGATTAAAGCAGCGTCCTACCAGTTGTGTCTCAAGATTGACAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034053.7 ENSMUST00000210422.2 |
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| CDS TCA 72 bp | TTGTCATCTGAGTACAACTGCATAGGCGTGTTAAACTaGGCGTGTACGATCTTCACGCCCGGAAGTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: LSSEYNCIGVLN*ACTIFTPGSSI Trigger: AATGGAACTTCCGGGCGTGAAGATCGTACACGCTCAGTTTAACACGCCTATGCAGTTGTACTCAGATGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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| CDS CAA 72 bp | GGTTTGAATTCCTGTGGTTCAGCTTCTAAGTTGATTTaGAAGGGGTGTGCTTTTCCATCTTCAGACACCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLNSCGSASKLI*KGCAFPSSDTC Trigger: GCAGGTGTCTGAAGATGGAAAAGCACACCCCTTCAAAATCAACTTAGAAGCTGAACCACAGGAATTCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034053.7 |
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| CDS TCA 72 bp | AACCTGACCCTGAAGTGTTTCCATAATATTGTCATCTaGGTACAACTGCATAGGCGTGTTAAACTGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: NLTLKCFHNIVI*VQLHRRVKLSV Trigger: CACGCTCAGTTTAACACGCCTATGCAGTTGTACTCAGATGACAATATTATGGAAACACTTCAGGGTCAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210422.2 |
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